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Bausch, Daniel G; Edmunds, John; (2018) Real-Time Modeling Should Be Routinely Integrated into Outbreak Response. The American journal of tropical medicine and hygiene, 98 (5). pp. 1214-1215. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.18-0150

Beretta, Maxime; Moreau, Alain; Bouvin-Pley, Mélanie; Essat, Asma; Goujard, Cécile; Chaix, Marie-Laure; Hue, Stéphane; Meyer, Laurence; Barin, Francis; Braibant, Martine; +1 more... ANRS 06 Primo Cohort; (2018) Phenotypic properties of envelope glycoproteins of transmitted HIV-1 variants from patients belonging to transmission chains. AIDS (London, England), 32 (14). pp. 1917-1926. ISSN 0269-9370 DOI: https://doi.org/10.1097/QAD.0000000000001906

Bisset, Kate Alexandra; Paterson, Pauline; (2018) Strategies for increasing uptake of vaccination in pregnancy in high-income countries: A systematic review. Vaccine, 36 (20). pp. 2751-2759. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2018.04.013

Boccia, D; Rudgard, W; Shrestha, S; Lönnroth, K; Eckhoff, P; Golub, J; Sanchez, M; Maciel, E; Rasella, D; Shete, P; +4 more... Pedrazzoli, D; Houben, R; Chang, S; Dowdy, D; (2018) Modelling the impact of social protection on tuberculosis: the S-PROTECT project. BMC public health, 18 (1). 786-. ISSN 1471-2458 DOI: https://doi.org/10.1186/s12889-018-5539-x

Cavany, Sean M; Vynnycky, Emilia; Sumner, Tom; Macdonald, Neil; Thomas, H Lucy; White, Jacqui; White, Richard G; Maguire, Helen; Anderson, Charlotte; (2018) Transmission events revealed in tuberculosis contact investigations in London. Scientific reports, 8 (1). 6676-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-25149-6

Chang, Stewart T; Chihota, Violet N; Fielding, Katherine L; Grant, Alison D; Houben, Rein M; White, Richard G; Churchyard, Gavin J; Eckhoff, Philip A; Wagner, Bradley G; (2018) Correction to: Small contribution of gold mines to the ongoing tuberculosis epidemic in South Africa: a modeling-based study. BMC MEDICINE, 16 (1). 242-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-018-1238-9

Clifton, Soazig; Bolt, Hikaru; Mohammed, Hamish; Town, Katy; Furegato, Martina; Cole, Michelle; Campbell, Oona; Fifer, Helen; Hughes, Gwenda; (2018) Prevalence of and factors associated with MDR Neisseria gonorrhoeae in England and Wales between 2004 and 2015: analysis of annual cross-sectional surveillance surveys. The Journal of antimicrobial chemotherapy, 73 (4). pp. 923-932. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkx520

Clifton, Soazig; Mercer, Catherine H; Sonnenberg, Pam; Tanton, Clare; Field, Nigel; Gravningen, Kirsten; Hughes, Gwenda; Mapp, Fiona; Johnson, Anne M; (2018) STI Risk Perception in the British Population and How It Relates to Sexual Behaviour and STI Healthcare Use: Findings From a Cross-sectional Survey (Natsal-3). EClinicalMedicine, 2-3. pp. 29-36. ISSN 2589-5370 DOI: https://doi.org/10.1016/j.eclinm.2018.08.001

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de Alwis, Ruklanthi; Watson, Conall; Nikolay, Birgit; Lowry, John H; Thieu, Nga Tran Vu; Van, Tan Trinh; Ngoc, Dung Tran Thi; Rawalai, Kitione; Taufa, Mere; Coriakula, Jerimaia; +6 more... Lau, Colleen L; Nilles, Eric J; Edmunds, W John; Kama, Mike; Baker, Stephen; Cano, Jorge; (2018) Role of Environmental Factors in Shaping Spatial Distribution of Salmonella enterica Serovar Typhi, Fiji. Emerging infectious diseases, 24 (2). pp. 284-293. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2402.170704

Eggo, Rosalind M; Kucharski, Adam J; (2018) Expected Duration of Adverse Pregnancy Outcomes after Zika Epidemic. Emerging infectious diseases, 24 (1). pp. 127-130. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2401.170482

Field, Nigel; Clifton, Soazig; Alexander, Sarah; Ison, Catherine A; Khanom, Rumena; Saunders, Pamela; Hughes, Gwenda; Heath, Laura; Beddows, Simon; Mercer, Catherine H; +3 more... Tanton, Clare; Johnson, Anne M; Sonnenberg, Pam; (2018) Trichomonas vaginalis infection is uncommon in the British general population: implications for clinical testing and public health screening. Sexually transmitted infections, 94 (3). pp. 226-229. ISSN 1368-4973 DOI: https://doi.org/10.1136/sextrans-2016-052660

Flasche, Stefan; Atkins, Katherine E; (2018) Balancing Benefits and Risks of Antibiotic Use. The Journal of infectious diseases, 218 (9). pp. 1351-1353. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiy344

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Hasan, Alvira Z; Saha, Senjuti; Saha, Samir K; Sahakyan, Gayane; Grigoryan, Svetlana; Mwenda, Jason M; Antonio, Martin; Knoll, Maria D; Serhan, Fatima; Cohen, Adam L; +1 more... Pneumococcal and rotavirus surveillance case study group; (2018) Using pneumococcal and rotavirus surveillance in vaccine decision-making: A series of case studies in Bangladesh, Armenia and the Gambia. Vaccine, 36 (32 Pt ). pp. 4939-4943. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2018.06.001

Horton, Katherine C; Sumner, Tom; Houben, Rein MGJ; Corbett, Elizabeth L; White, Richard G; (2018) A Bayesian Approach to Understanding Sex Differences in Tuberculosis Disease Burden. American journal of epidemiology, 187 (11). pp. 2431-2438. ISSN 0002-9262 DOI: https://doi.org/10.1093/aje/kwy131

Horton, Katherine C; White, Richard G; Houben, Rein MGJ; (2018) Systematic neglect of men as a key population in tuberculosis. Tuberculosis (Edinburgh, Scotland), 113. pp. 249-253. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2018.09.006

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Imran, Hafsa; Raja, Dania; Grassly, Nicholas C; Wadood, M Zubair; Safdar, Rana M; O'Reilly, Kathleen M; (2018) Routine immunization in Pakistan: comparison of multiple data sources and identification of factors associated with vaccination. Int Health, 10 (2). pp. 84-91. ISSN 1876-3405 DOI: https://doi.org/10.1093/inthealth/ihx067

Jarvis, Christopher I; Altamirano, Jonathan; Sarnquist, Clea; Edmunds, W John; Maldonado, Yvonne; (2018) Spatial Analyses of Oral Polio Vaccine Transmission in an Community Vaccinated With Inactivated Polio Vaccine. Clinical infectious diseases, 67 (suppl_). S18-S25. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy622

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le Polain de Waroux, O; Cohuet, S; Ndazima, D; Kucharski, AJ; Juan-Giner, A; Flasche, S; Tumwesigye, E; Arinaitwe, R; Mwanga-Amumpaire, J; Boum, Y; +4 more... Nackers, F; Checchi, F; Grais, RF; Edmunds, WJ; (2018) Characteristics of human encounters and social mixing patterns relevant to infectious diseases spread by close contact: a survey in Southwest Uganda. BMC infectious diseases, 18 (1). 172-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-018-3073-1

le Polain de Waroux, Olivier; Flasche, Stefan; Kucharski, Adam J; Langendorf, Celine; Ndazima, Donny; Mwanga-Amumpaire, Juliet; Grais, Rebecca F; Cohuet, Sandra; Edmunds, W John; (2018) Identifying human encounters that shape the transmission of Streptococcus pneumoniae and other acute respiratory infections. Epidemics, 25. pp. 72-79. ISSN 1755-4365 DOI: https://doi.org/10.1016/j.epidem.2018.05.008

Mannell, Jenevieve; Abubakar, Ibrahim; Bastawrous, Andrew; Osrin, David; Patel, Preeti; Piot, Peter; Prince, Martin; Smith, Jim; Wilkinson, Robert J; Horton, Richard; (2018) UK's role in global health research innovation. Lancet, 391 (10122). pp. 721-723. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(18)30303-9

McCreesh, Nicky; White, Richard G; (2018) An explanation for the low proportion of tuberculosis that results from transmission between household and known social contacts. Scientific reports, 8 (1). 5382-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-23797-2

Moturi, E; Horton, Katherine; Bell, L; Breakwell, L; Dueger, E; (2018) PanStop: a decade of rapid containment exercises for pandemic preparedness in the WHO Western Pacific Region. Western Pacific Surveillence Response Journal, 9 (5). DOI: https://doi.org/10.5365/wpsar.2018.9.5.012.

Moturi, Edna; Horton, Katherine; Bell, Leila; Breakwell, Lucy; Dueger, Erica; (2018) PanStop: a decade of rapid containment exercises for pandemic preparedness in the WHO Western Pacific Region. Western Pacific surveillance and response journal : WPSAR, 9 (5 Supp). pp. 71-74. ISSN 2094-7321 DOI: https://doi.org/10.5365/wpsar.2018.9.5.012

Nliwasa, Marriott; MacPherson, Peter; Gupta-Wright, Ankur; Mwapasa, Mphatso; Horton, Katherine; Odland, Jon Ø; Flach, Clare; Corbett, Elizabeth L; (2018) High HIV and active tuberculosis prevalence and increased mortality risk in adults with symptoms of TB: a systematic review and meta-analyses. Journal of the International AIDS Society, 21 (7). e25162-. ISSN 1758-2652 DOI: https://doi.org/10.1002/jia2.25162

O'Reilly, Kathleen M; Lowe, Rachel; Edmunds, W John; Mayaud, Philippe; Kucharski, Adam; Eggo, Rosalind M; Funk, Sebastian; Bhatia, Deepit; Khan, Kamran; Kraemer, Moritz UG; +8 more... Wilder-Smith, Annelies; Rodrigues, Laura C; Brasil, Patricia; Massad, Eduardo; Jaenisch, Thomas; Cauchemez, Simon; Brady, Oliver J; Yakob, Laith; (2018) Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis. BMC medicine, 16 (1). 180-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-018-1158-8

O'Reilly, Kathleen M; Verity, Robert; Durry, Elias; Asghar, Humayun; Sharif, Salmaan; Zaidi, Sohail Z; Wadood, M Zubair M; Diop, Ousmane M; Okayasu, Hiro; Safdar, Rana M; +1 more... Grassly, Nicholas C; (2018) Population sensitivity of acute flaccid paralysis and environmental surveillance for serotype 1 poliovirus in Pakistan: an observational study. BMC infectious diseases, 18 (1). 176-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-018-3070-4

Opatowski, Lulla; Baguelin, Marc; Eggo, Rosalind M; (2018) Influenza Interaction with Cocirculating Pathogens, and Its Impact on Surveillance, Pathogenesis and Epidemic Profile: A Key Role for Mathematical Modeling. PLoS Pathogens, 14 (2). ISSN 1553-7366 DOI: https://doi.org/10.1101/203265

Opatowski, Lulla; Baguelin, Marc; Eggo, Rosalind M; (2018) Influenza interaction with cocirculating pathogens and its impact on surveillance, pathogenesis, and epidemic profile: A key role for mathematical modelling. PLoS pathogens, 14 (2). e1006770-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1006770

Orsborne, James; Furuya-Kanamori, Luis; Jeffries, Claire L; Kristan, Mojca; Mohammed, Abdul Rahim; Afrane, Yaw A; O'Reilly, Kathleen; Massad, Eduardo; Drakeley, Chris; Walker, Thomas; +1 more... Yakob, Laith; (2018) Using the human blood index to investigate host biting plasticity: a systematic review and meta-regression of the three major African malaria vectors. Malaria journal, 17 (1). 479-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-018-2632-7

Paterson, Pauline; Schulz, Will; Utley, Martin; Larson, Heidi J; (2018) Parents' Experience and Views of Vaccinating Their Child against Influenza at Primary School and at the General Practice. International journal of environmental research and public health, 15 (4). p. 622. ISSN 1661-7827 DOI: https://doi.org/10.3390/ijerph15040622

Pedrazzoli, Debora; Siroka, Andrew; Boccia, Delia; Bonsu, Frank; Nartey, Kenneth; Houben, Rein; Borghi, Josephine; (2018) How affordable is TB care? Findings from a nationwide TB patient cost survey in Ghana. Tropical medicine & international health, 23 (8). pp. 870-878. ISSN 1360-2276 DOI: https://doi.org/10.1111/tmi.13085

Pescarini, Julia Moreira; Simonsen, Vera; Ferrazoli, Lucilaine; Rodrigues, Laura C; Oliveira, Rosangela S; Waldman, Eliseu Alves; Houben, Rein; (2018) Migration and tuberculosis transmission in a middle-income country: a cross-sectional study in a central area of São Paulo, Brazil. BMC medicine, 16 (1). 62-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-018-1055-1

Simas, Clarissa; Munoz, Nubia; Arregoces, Leonardo; Larson, Heidi J; (2018) HPV vaccine confidence and cases of mass psychogenic illness following immunization in Carmen de Bolivar, Colombia. Human vaccines & immunotherapeutics, 15 (1). pp. 163-166. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2018.1511667

Sobkowiak, Benjamin; Glynn, Judith R; Houben, Rein MGJ; Mallard, Kim; Phelan, Jody E; Guerra-Assunção, José Afonso; Banda, Louis; Mzembe, Themba; Viveiros, Miguel; McNerney, Ruth; +3 more... Parkhill, Julian; Crampin, Amelia C; Clark, Taane G; (2018) Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. BMC genomics, 19 (1). 613-. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-018-4988-z

Steel, Nicholas; Ford, John A; Newton, John N; Davis, Adrian CJ; Vos, Theo; Naghavi, Mohsen; Glenn, Scott; Hughes, Andrew; Dalton, Alice M; Stockton, Diane; +34 more... Humphreys, Ciaran; Dallat, Mary; Schmidt, Jürgen; Flowers, Julian; Fox, Sebastian; Abubakar, Ibrahim; Aldridge, Robert W; Baker, Allan; Brayne, Carol; Brugha, Traolach; Capewell, Simon; Car, Josip; Cooper, Cyrus; Ezzati, Majid; Fitzpatrick, Justine; Greaves, Felix; Hay, Roderick; Hay, Simon; Kee, Frank; Larson, Heidi J; Lyons, Ronan A; Majeed, Azeem; McKee, Martin; Rawaf, Salman; Rutter, Harry; Saxena, Sonia; Sheikh, Aziz; Smeeth, Liam; Viner, Russell M; Vollset, Stein Emil; Williams, Hywel C; Wolfe, Charles; Woolf, Anthony; Murray, Christopher JL; (2018) Changes in health in the countries of the UK and 150 English Local Authority areas 1990-2016: a systematic analysis for the Global Burden of Disease Study 2016. LANCET, 392 (10158). pp. 1647-1661. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(18)32207-4

Stone, Jack; Fraser, Hannah; Lim, Aaron G; Walker, Josephine G; Ward, Zoe; MacGregor, Louis; Trickey, Adam; Abbott, Sam; Strathdee, Steffanie A; Abramovitz, Daniela; +33 more... Maher, Lisa; Iversen, Jenny; Bruneau, Julie; Zang, Geng; Garfein, Richard S; Yen, Yung-Fen; Azim, Tasnim; Mehta, Shruti H; Milloy, Michael-John; Hellard, Margaret E; Sacks-Davis, Rachel; Dietze, Paul M; Aitken, Campbell; Aladashvili, Malvina; Tsertsvadze, Tengiz; Mravčík, Viktor; Alary, Michel; Roy, Elise; Smyrnov, Pavlo; Sazonova, Yana; Young, April M; Havens, Jennifer R; Hope, Vivian D; Desai, Monica; Heinsbroek, Ellen; Hutchinson, Sharon J; Palmateer, Norah E; McAuley, Andrew; Platt, Lucy; Martin, Natasha K; Altice, Frederick L; Hickman, Matthew; Vickerman, Peter; (2018) Incarceration history and risk of HIV and hepatitis C virus acquisition among people who inject drugs: a systematic review and meta-analysis. The Lancet infectious diseases, 18 (12). pp. 1397-1409. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(18)30469-9

Sun, Wai Han; Miu, Heidi Yin Hai; Wong, Carlos King Ho; Tucker, Joseph D; Wong, William Chi Wai; (2018) Assessing Participation and Effectiveness of the Peer-Led Approach in Youth Sexual Health Education: Systematic Review and Meta-Analysis in More Developed Countries. JOURNAL OF SEX RESEARCH, 55 (1). pp. 31-44. ISSN 0022-4499 DOI: https://doi.org/10.1080/00224499.2016.1247779

Tengbeh, Angus Fayia; Enria, Luisa; Smout, Elizabeth; Mooney, Thomas; Callaghan, Mike; Ishola, David; Leigh, Bailah; Watson-Jones, Deborah; Greenwood, Brian; Larson, Heidi; +1 more... Lees, Shelley; (2018) "We are the heroes because we are ready to die for this country": Participants' decision-making and grounded ethics in an Ebola vaccine clinical trial. Social science & medicine (1982), 203. pp. 35-42. ISSN 0277-9536 DOI: https://doi.org/10.1016/j.socscimed.2018.03.008

van Zandvoort, Kevin; Howard, Natasha; Mounier-Jack, Sandra; Jit, Mark; (2018) Strengthening national vaccine decision-making: Assessing the impact of SIVAC Initiative support on national immunisation technical advisory group (NITAG) functionality in 77 low and middle-income countries. Vaccine, 37 (3). pp. 430-434. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2018.11.070

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