Allen, Hester; Tessier, Elise; Turner, Charlie; Anderson, Charlotte; Blomquist, Paula; Simons, David; Løchen, Alessandra; Jarvis, Christopher I; Groves, Natalie; Capelastegui, Fernando; +13 more... Flannagan, Joe; Zaidi, Asad; Chen, Cong; Rawlinson, Christopher; Hughes, Gareth J; Chudasama, Dimple; Nash, Sophie; Thelwall, Simon; Lopez-Bernal, Jamie; Dabrera, Gavin; Charlett, André; Kall, Meaghan; Lamagni, Theresa; (2023) Comparative transmission of SARS-CoV-2 Omicron (B.1.1.529) and Delta (B.1.617.2) variants and the impact of vaccination: national cohort study, England. Epidemiology and infection, 151. e58. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268823000420

Quaife, Matthew; Torres-Rueda, Sergio; Dobreva, Zlatina; van Zandvoort, Kevin; Jarvis, Christopher I; Gimma, Amy; Zulfiqar, Wahaj; Khalid, Muhammad; Vassall, Anna; (2023) COVID-19 vaccine hesitancy and social contact patterns in Pakistan: results from a national cross-sectional survey. BMC infectious diseases, 23 (1). 321-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-023-08305-w

Walde, Jasmin; Chaturvedi, Madhav; Berger, Tom; Bartz, Antonia; Killewald, Robin; Tomori, Damilola Victoria; Rübsamen, Nicole; Lange, Berit; Scholz, Stefan; Treskova, Marina; +5 more... Bucksch, Karolin; Jarvis, Christopher I; Mikolajczyk, Rafael; Karch, André; Jaeger, Veronika K; (2023) Effect of risk status for severe COVID-19 on individual contact behaviour during the SARS-CoV-2 pandemic in 2020/2021-an analysis based on the German COVIMOD study. BMC infectious diseases, 23 (1). 205-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-023-08175-2

Wong, Kerry LM; Gimma, Amy; Coletti, Pietro; CoMix Europe Working Group; Faes, Christel; Beutels, Philippe; Hens, Niel; Jaeger, Veronika K; Karch, Andre; Johnson, Helen; +2 more... Edmunds, WJohn; Jarvis, Christopher I; (2023) Social contact patterns during the COVID-19 pandemic in 21 European countries - evidence from a two-year study. BMC infectious diseases, 23 (1). 268-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-023-08214-y

Bedston, Stuart; Akbari, Ashley; Jarvis, Christopher I; Lowthian, Emily; Torabi, Fatemeh; North, Laura; Lyons, Jane; Perry, Malorie; Griffiths, Lucy J; Owen, Rhiannon K; +15 more... Beggs, Jillian; Chuter, Antony; Bradley, Declan T; de Lusignan, Simon; Fry, Richard; Richard Hobbs, FD; Hollinghurst, Joe; Katikireddi, Srinivasa Vittal; Murphy, Siobhán; O'Reily, Dermot; Robertson, Chris; Shi, Ting; Tsang, Ruby SM; Sheikh, Aziz; Lyons, Ronan A; (2022) COVID-19 vaccine uptake, effectiveness, and waning in 82,959 health care workers: A national prospective cohort study in Wales. Vaccine, 40 (8). pp. 1180-1189. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2021.11.061

Blomquist, Paula B; Bridgen, Jessica; Bray, Neil; O'Connell, Anne Marie; West, Daniel; Groves, Natalie; Gallagher, Eileen; Utsi, Lara; Jarvis, Christopher I; Hardstaff, Jo L; +16 more... Byers, Chloe; Metelmann, Soeren; Simons, David; Zaidi, Asad; Twohig, Katherine A; Savagar, Bethan; Løchen, Alessandra; Ryan, Cian; Wrenn, Katie; Saavedra-Campos, María; Abedin, Zahidul; Florence, Isaac; Cleary, Paul; Elson, Richard; Vivancos, Roberto; Lake, Iain R; (2022) Enhancing epidemiological surveillance of the emergence of the SARS-CoV-2 Omicron variant using spike gene target failure data, England, 15 November to 31 December 2021. Eurosurveillance, 27 (11). pp. 6-10. ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2022.27.11.2200143

Dobreva, Zlatina; Gimma, Amy; Rohan, Hana; Djoudalbaye, Benjamin; Tshangela, Akhona; Jarvis, Christopher I; van Zandvoort, Kevin; Quaife, Matthew; (2022) Characterising social contacts under COVID-19 control measures in Africa. BMC Medicine, 20 (1). 344-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-022-02543-6

Gimma, Amy; Munday, James D; Wong, Kerry LM; Coletti, Pietro; van Zandvoort, Kevin; Prem, Kiesha; CMMID COVID-19 working group; Klepac, Petra; Rubin, G James; Funk, Sebastian; +2 more... Edmunds, W John; Jarvis, Christopher I; (2022) Changes in social contacts in England during the COVID-19 pandemic between March 2020 and March 2021 as measured by the CoMix survey: A repeated cross-sectional study. PLoS medicine, 19 (3). e1003907-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1003907

Jarvis, Christopher I; Gimma, Amy; Finger, Flavio; Morris, Tim P; Thompson, Jennifer A; le Polain de Waroux, Olivier; Edmunds, W John; Funk, Sebastian; Jombart, Thibaut; (2022) Measuring the unknown: An estimator and simulation study for assessing case reporting during epidemics. PLoS Computational Biology, 18 (5). e1008800-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1008800

Ratnayake, Ruwan; Checchi, Francesco; Jarvis, Christopher I; Edmunds, W John; Finger, Flavio; (2022) Inference is bliss: Simulation for power estimation for an observational study of a cholera outbreak intervention. PLoS neglected tropical diseases, 16 (2). e0010163-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0010163

Wambua, James; Hermans, Lisa; Coletti, Pietro; Verelst, Frederik; Willem, Lander; Jarvis, Christopher I; Gimma, Amy; Wong, Kerry LM; Lajot, Adrien; Demarest, Stefaan; +4 more... Edmunds, W John; Faes, Christel; Beutels, Philippe; Hens, Niel; (2022) The influence of risk perceptions on close contact frequency during the SARS-CoV-2 pandemic. Scientific Reports, 12 (1). 5192-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-022-09037-8

Wong, Kerry LM; Gimma, Amy; Paixao, Enny S; CoMix Europe Working Group; Faes, Christel; Beutels, Philippe; Hens, Niel; Jarvis, Christopher I; Edmunds, W John; (2022) Pregnancy during COVID-19: social contact patterns and vaccine coverage of pregnant women from CoMix in 19 European countries. BMC pregnancy and childbirth, 22 (1). 757-. ISSN 1471-2393 DOI: https://doi.org/10.1186/s12884-022-05076-1

Berger, Loïc; Berger, Nicolas; Bosetti, Valentina; Gilboa, Itzhak; Hansen, Lars Peter; Jarvis, Christopher; Marinacci, Massimo; Smith, Richard D; (2021) Rational policymaking during a pandemic. Proceedings of the National Academy of Sciences of the United States of America, 118 (4). e2012704118-e2012704118. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.2012704118

Davies, Nicholas G; Abbott, Sam; Barnard, Rosanna C; Jarvis, Christopher I; Kucharski, Adam J; Munday, James D; Pearson, Carl AB; Russell, Timothy W; Tully, Damien C; Washburne, Alex D; +15 more... Wenseleers, Tom; Gimma, Amy; Waites, William; Wong, Kerry LM; van Zandvoort, Kevin; Silverman, Justin D; CMMID COVID-19 Working Group; COVID-19 Genomics UK (COG-UK) Consortium; Diaz-Ordaz, Karla; Keogh, Ruth; Eggo, Rosalind M; Funk, Sebastian; Jit, Mark; Atkins, Katherine E; Edmunds, W John; (2021) Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England. Science (New York, N.Y.), 372 (6538). 149-+. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.abg3055

Davies, Nicholas G; Jarvis, Christopher I; CMMID COVID-19 Working Group; Edmunds, W John; Jewell, Nicholas P; Diaz-Ordaz, Karla; Keogh, Ruth H; (2021) Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7. Nature, 593 (7858). pp. 270-274. ISSN 0028-0836 DOI: https://doi.org/10.1038/s41586-021-03426-1

Jarvis, Christopher I; Gimma, Amy; van Zandvoort, Kevin; Wong, Kerry LM; CMMID COVID-19 working group; Edmunds, W John; (2021) The impact of local and national restrictions in response to COVID-19 on social contacts in England: a longitudinal natural experiment. BMC medicine, 19 (1). 52-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-021-01924-7

Lee, Sophie A; Jarvis, Christopher I; Edmunds, W John; Economou, Theodoros; Lowe, Rachel; (2021) Spatial connectivity in mosquito-borne disease models: a systematic review of methods and assumptions. Journal of The Royal Society Interface, 18 (178). 20210096-. DOI: https://doi.org/10.1098/rsif.2021.0096

Munday, James D; Jarvis, Christopher I; Gimma, Amy; Wong, Kerry LM; van Zandvoort, Kevin; CMMID COVID-19 Working Group; Funk, Sebastian; Edmunds, W John; CMMID COVID-19 Working Group; (2021) Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data. BMC medicine, 19 (1). 233-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-021-02107-0

O'Reilly, Kathleen M; Sandman, Frank; Allen, David; Jarvis, Christopher I; Gimma, Amy; Douglas, Amy; Larkin, Lesley; Wong, Kerry LM; Baguelin, Marc; Baric, Ralph S; +4 more... Lindesmith, Lisa C; Goldstein, Richard A; Breuer, Judith; Edmunds, W John; (2021) Predicted norovirus resurgence in 2021-2022 due to the relaxation of nonpharmaceutical interventions associated with COVID-19 restrictions in England: a mathematical modeling study. BMC medicine, 19 (1). 299-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-021-02153-8

Verelst, Frederik; Hermans, Lisa; Vercruysse, Sarah; Gimma, Amy; Coletti, Pietro; Backer, Jantien A; Wong, Kerry LM; Wambua, James; van Zandvoort, Kevin; Willem, Lander; +7 more... Bogaardt, Laurens; Faes, Christel; Jarvis, Christopher I; Wallinga, Jacco; Edmunds, W John; Beutels, Philippe; Hens, Niel; (2021) SOCRATES-CoMix: a platform for timely and open-source contact mixing data during and in between COVID-19 surges and interventions in over 20 European countries. BMC medicine, 19 (1). 254-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-021-02133-y

Coletti, Pietro; Wambua, James; Gimma, Amy; Willem, Lander; Vercruysse, Sarah; Vanhoutte, Bieke; Jarvis, Christopher I; Van Zandvoort, Kevin; Edmunds, John; Beutels, Philippe; +1 more... Hens, Niel; (2020) CoMix: comparing mixing patterns in the Belgian population during and after lockdown. SCIENTIFIC REPORTS, 10 (1). 21885-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-020-78540-7

Davies, Nicholas G; Barnard, Rosanna C; Jarvis, Christopher I; Russell, Timothy W; Semple, Malcolm G; Jit, Mark; Edmunds, W John; Centre for Mathematical Modelling of Infectious Diseases COVID-1; ISARIC4C investigators; (2020) Association of tiered restrictions and a second lockdown with COVID-19 deaths and hospital admissions in England: a modelling study. The Lancet. Infectious diseases, 21 (4). pp. 482-492. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(20)30984-1

Gibbs, Hamish; Liu, Yang; Pearson, Carl AB; Jarvis, Christopher I; Grundy, Chris; Quilty, Billy J; Diamond, Charlie; LSHTM CMMID COVID-19 working group; Eggo, Rosalind M; (2020) Changing travel patterns in China during the early stages of the COVID-19 pandemic. NATURE COMMUNICATIONS, 11 (1). 5012-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-020-18783-0

Hellewell, Joel; Abbott, Sam; Gimma, Amy; Bosse, Nikos I; Jarvis, Christopher I; Russell, Timothy W; Munday, James D; Kucharski, Adam J; Edmunds, W John; Centre for the Mathematical Modelling of Infectious Diseases COV; +2 more... Funk, Sebastian; Eggo, Rosalind M; (2020) Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. The Lancet. Global health, 8 (4). e488-e496. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(20)30074-7

Jarvis, Christopher I; Van Zandvoort, Kevin; Gimma, Amy; Prem, Kiesha; CMMID COVID-19 working group; Klepac, Petra; Rubin, G James; Edmunds, W John; (2020) Quantifying the impact of physical distance measures on the transmission of COVID-19 in the UK. BMC medicine, 18 (1). 124-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-020-01597-8

Jombart, Thibaut; Jarvis, Christopher I; Mesfin, Samuel; Tabal, Nabil; Mossoko, Mathias; Mpia, Luigino Minikulu; Abedi, Aaron Aruna; Chene, Sonia; Forbin, Ekokobe Elias; Belizaire, Marie Roseline D; +13 more... de Radiguès, Xavier; Ngombo, Richy; Tutu, Yannick; Finger, Flavio; Crowe, Madeleine; Edmunds, W John; Nsio, Justus; Yam, Abdoulaye; Diallo, Boubacar; Gueye, Abdou Salam; Ahuka-Mundeke, Steve; Yao, Michel; Fall, Ibrahima Socé; (2020) The cost of insecurity: from flare-up to control of a major Ebola virus disease hotspot during the outbreak in the Democratic Republic of the Congo, 2019. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 25 (2). pp. 19-22. ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2020.25.2.1900735 Item availability may be restricted.

Jombart, Thibaut; van Zandvoort, Kevin; Russell, Timothy W; Jarvis, Christopher I; Gimma, Amy; Abbott, Sam; Clifford, Sam; Funk, Sebastian; Gibbs, Hamish; Liu, Yang; +6 more... Pearson, Carl AB; Bosse, Nikos I; Centre for the Mathematical Modelling of Infectious Diseases COV; Eggo, Rosalind M; Kucharski, Adam J; Edmunds, W John; (2020) Inferring the number of COVID-19 cases from recently reported deaths. Wellcome open research, 5. 78-. DOI: https://doi.org/10.12688/wellcomeopenres.15786.1

Quaife, Matthew; van Zandvoort, Kevin; Gimma, Amy; Shah, Kashvi; McCreesh, Nicky; Prem, Kiesha; Barasa, Edwine; Mwanga, Daniel; Kangwana, Beth; Pinchoff, Jessie; +4 more... CMMID COVID-19 Working Group; Edmunds, W John; Jarvis, Christopher I; Austrian, Karen; (2020) The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements. BMC Med, 18 (1). 316-. DOI: https://doi.org/10.1186/s12916-020-01779-4

Quilty, Billy J; Diamond, Charlie; Liu, Yang; Gibbs, Hamish; Russell, Timothy W; Jarvis, Christopher I; Prem, Kiesha; Pearson, Carl AB; Clifford, Samuel; Flasche, Stefan; +4 more... CMMID COVID-19 working group; Klepac, Petra; Eggo, Rosalind M; Jit, Mark; (2020) The effect of travel restrictions on the geographical spread of COVID-19 between large cities in China: a modelling study. BMC medicine, 18 (1). 259-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-020-01712-9

Rentsch, Christopher T; Kidwai-Khan, Farah; Tate, Janet P; Park, Lesley S; King, Joseph T; Skanderson, Melissa; Hauser, Ronald G; Schultze, Anna; Jarvis, Christopher I; Holodniy, Mark; +6 more... Lo Re, Vincent; Akgun, Kathleen M; Crothers, Kristina; Taddei, Tamar H; Freiberg, Matthew S; Justice, Amy C; (2020) Covid-19 Testing, Hospital Admission, and Intensive Care Among 2,026,227 United States Veterans Aged 54-75 Years. medRxiv. DOI: https://doi.org/10.1101/2020.04.09.20059964

Rentsch, Christopher T; Kidwai-Khan, Farah; Tate, Janet P; Park, Lesley S; King, Joseph T; Skanderson, Melissa; Hauser, Ronald G; Schultze, Anna; Jarvis, Christopher I; Holodniy, Mark; +6 more... Lo Re, Vincent; Akgün, Kathleen M; Crothers, Kristina; Taddei, Tamar H; Freiberg, Matthew S; Justice, Amy C; (2020) Patterns of COVID-19 testing and mortality by race and ethnicity among United States veterans: A nationwide cohort study. PLOS Medicine, 17 (9). e1003379-. DOI: https://doi.org/10.1371/journal.pmed.1003379

Russell, Timothy W; Golding, Nick; Hellewell, Joel; Abbott, Sam; Wright, Lawrence; Pearson, Carl AB; Zandvoort, Kevin van; Jarvis, Christopher I; Gibbs, Hamish; Liu, Yang; +3 more... Eggo, Rosalind M; Edmunds, W John; Kucharski, Adam J; (2020) Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections. DOI: https://doi.org/10.1101/2020.07.07.20148460

Russell, Timothy W; Golding, Nick; Hellewell, Joel; Abbott, Sam; Wright, Lawrence; Pearson, Carl AB; van Zandvoort, Kevin; Jarvis, Christopher I; Gibbs, Hamish; Liu, Yang; +4 more... Eggo, Rosalind M; Edmunds, W John; Kucharski, Adam J; CMMID COVID-19 working group; (2020) Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections. BMC medicine, 18 (1). 332-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-020-01790-9

Russell, Timothy W; Hellewell, Joel; Jarvis, Christopher I; van Zandvoort, Kevin; Abbott, Sam; Ratnayake, Ruwan; CMMID COVID-19 working group; Flasche, Stefan; Eggo, Rosalind M; Edmunds, W John; +1 more... Kucharski, Adam J; (2020) Estimating the infection and case fatality ratio for coronavirus disease (COVID-19) using age-adjusted data from the outbreak on the Diamond Princess cruise ship, February 2020. Euro Surveill, 25 (12). ISSN 1560-7917 DOI: https://doi.org/10.2807/1560-7917.ES.2020.25.12.2000256

Steens, Anneke; Freiesleben de Blasio, Birgitte; Veneti, Lamprini; Gimma, Amy; Edmunds, W John; Van Zandvoort, Kevin; Jarvis, Christopher I; Forland, Frode; Robberstad, Bjarne; (2020) Poor self-reported adherence to COVID-19-related quarantine/isolation requests, Norway, April to July 2020. EUROSURVEILLANCE, 25 (37). pp. 5-10. ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2020.25.37.2001607

van Zandvoort, Kevin; Jarvis, Christopher I; Pearson, Carl AB; Davies, Nicholas G; CMMID COVID-19 working group; Ratnayake, Ruwan; Russell, Timothy W; Kucharski, Adam J; Jit, Mark; Flasche, Stefan; +2 more... Eggo, Rosalind M; Checchi, Francesco; (2020) Response strategies for COVID-19 epidemics in African settings: a mathematical modelling study. BMC Medicine, 18 (1). 324-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-020-01789-2

Jarvis, Christopher I; Multerer, Lea; Lewis, Daniel; Binka, Fred; Edmunds, W John; Alexander, Neal; Smith, Thomas A; (2019) Spatial Effects of Permethrin-Impregnated Bed Nets on Child Mortality: 26 Years on, a Spatial Reanalysis of a Cluster Randomized Trial. The American Journal of Tropical Medicine and Hygiene, 101 (6). pp. 1434-1441. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.19-0111

Morris, Tim P; Jarvis, Christopher I; Cragg, William; Phillips, Patrick PJ; Choodari-Oskooei, Babak; Sydes, Matthew R; (2019) Proposals on Kaplan-Meier plots in medical research and a survey of stakeholder views: KMunicate. BMJ open, 9 (9). e030215-. ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2019-030215

Wong, Kerry Lm; Brady, Oliver J; Campbell, Oona Maeve Renee; Jarvis, Christopher I; Pembe, Andrea; Gomez, Gabriela B; Benova, Lenka; (2019) Current realities versus theoretical optima: quantifying efficiency and sociospatial equity of travel time to hospitals in low-income and middle-income countries. BMJ Global Health, 4 (4). e001552-. DOI: https://doi.org/10.1136/bmjgh-2019-001552

Jarvis, Christopher I; Altamirano, Jonathan; Sarnquist, Clea; Edmunds, W John; Maldonado, Yvonne; (2018) Spatial Analyses of Oral Polio Vaccine Transmission in an Community Vaccinated With Inactivated Polio Vaccine. Clinical infectious diseases, 67 (suppl_). S18-S25. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy622

Jarvis, Christopher; Di Tanna, Gian Luca; Lewis, Daniel; Alexander, Neal; Edmunds, W John; (2017) Spatial analysis of cluster randomised trials: a systematic review of analysis methods. Emerging themes in epidemiology, 14 (1). 12-. ISSN 1742-7622 DOI: https://doi.org/10.1186/s12982-017-0066-2

Smith, Chris; Jarvis, Christopher; Free, Caroline; (2017) Assessing loss to follow-up in the MObile Technology for Improved Family Planning (MOTIF) randomised controlled trial. Trials, 18 (1). 577-. ISSN 1745-6215 DOI: https://doi.org/10.1186/s13063-017-2316-6

Henderson, Robert A; Jarvis, Christopher; Clayton, Tim; Pocock, Stuart J; Fox, Keith AA; (2015) 10-Year Mortality Outcome of a Routine Invasive Strategy Versus a Selective Invasive Strategy in Non-ST-Segment Elevation Acute Coronary Syndrome: The British Heart Foundation RITA-3 Randomized Trial. Journal of the American College of Cardiology, 66 (5). pp. 511-520. ISSN 0735-1097 DOI: https://doi.org/10.1016/j.jacc.2015.05.051