Items where Author is "Scott, JA"

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Abdullahi, O; Nyiro, J; Lewa, P; Slack, M; Scott, JA; (2008) The descriptive epidemiology of Streptococcus pneumoniae and Haemophilus influenzae nasopharyngeal carriage in children and adults in Kilifi district, Kenya. The Pediatric infectious disease journal, 27 (1). pp. 59-64. ISSN 0891-3668 DOI: https://doi.org/10.1097/INF.0b013e31814da70c Full text not available from this repository.

Abdullahi, O; Wanjiru, E; Musyimi, R; Glass, N; Scott, JA; (2007) Validation of nasopharyngeal sampling and culture techniques for detection of Streptococcus pneumoniae in children in Kenya. Journal of clinical microbiology, 45 (10). pp. 3408-10. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01393-07 Full text not available from this repository.

Aiken, AM; Allegranzi, B; Scott, JA; Mehtar, S; Pittet, D; Grundmann, H; (2014) Antibiotic resistance needs global solutions. The Lancet infectious diseases, 14 (7). pp. 550-1. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(14)70709-1 Full text not available from this repository.

Baggett, HC; Watson, NL; Deloria Knoll, M; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; Kotloff, KL; Levine, OS; Madhi, SA; +98 more... Murdoch, DR; Scott, JAG; Thea, DM; Antonio, M; Awori, JO; Baillie, VL; Deluca, AN; Driscoll, AJ; Duncan, J; Ebruke, BE; Goswami, D; Higdon, MM; Karron, RA; Moore, DP; Morpeth, SC; Mulindwa, JM; Park, DE; Paveenkittiporn, W; Piralam, B; Prosperi, C; Sow, SO; Tapia, MD; Zaman, K; Zeger, SL; O’Brien, KL; O, KL; L, OS; K, MD; F, DR; D, AN; D, AJ; Fancourt, N; Fu, W; H, LL; H, MM; Wangeci Kagucia, E; K, RA; LI, M; P, DE; P, C; Wu, Z; Z, SL; W, NL; Crawley, J; M, DR; B, WA; Endtz, HP; Z, K; G, D; Hossain, L; Jahan, Y; Ashraf, H; C. H, SR; E, BE; A, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; G. S, JA; A, JO; M, SC; Kamau, A; Kazungu, S; Ominde, MS; K, KL; T, MD; S, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; M, SA; M, DP; Adrian, PV; B, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; B, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; T, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Density of Upper Respiratory Colonization With Streptococcus pneumoniae and Its Role in the Diagnosis of Pneumococcal Pneumonia Among Children Aged <5 Years in the PERCH Study. Clinical infectious diseases, 64 (suppl_). S317-S327. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix100 Full text not available from this repository.

Bejon, P; Mwangi, I; Ngetsa, C; Mwarumba, S; Berkley, JA; Lowe, BS; Maitland, K; Marsh, K; English, M; Scott, JA; (2005) Invasive Gram-negative bacilli are frequently resistant to standard antibiotics for children admitted to hospital in Kilifi, Kenya. The Journal of antimicrobial chemotherapy, 56 (1). pp. 232-5. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dki145 Full text not available from this repository.

Berkley, JA; Munywoki, P; Ngama, M; Kazungu, S; Abwao, J; Bett, A; Lassauniére, R; Kresfelder, T; Cane, PA; Venter, M; +2 more... Scott, JA; Nokes, DJ; (2010) Viral etiology of severe pneumonia among Kenyan infants and children. JAMA, 303 (20). pp. 2051-7. ISSN 0098-7484 DOI: https://doi.org/10.1001/jama.2010.675 Full text not available from this repository.

Brent, AJ; Ahmed, I; Ndiritu, M; Lewa, P; Ngetsa, C; Lowe, B; Bauni, E; English, M; Berkley, JA; Scott, JA; (2006) Incidence of clinically significant bacteraemia in children who present to hospital in Kenya: community-based observational study. Lancet, 367 (9509). pp. 482-8. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(06)68180-4 Full text not available from this repository.

Brent, AJ; Mugo, D; Musyimi, R; Mutiso, A; Morpeth, S; Levin, M; Scott, JA; (2011) Performance of the MGIT TBc identification test and meta-analysis of MPT64 assays for identification of the Mycobacterium tuberculosis complex in liquid culture. Journal of clinical microbiology, 49 (12). pp. 4343-6. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.05995-11 Full text not available from this repository.

Chapman, SJ; Khor, CC; Vannberg, FO; Rautanen, A; Segal, S; Moore, CE; Davies, RJ; Day, NP; Peshu, N; Crook, DW; +4 more... Berkley, JA; Williams, TN; Scott, JA; Hill, AV; (2010) NFKBIZ polymorphisms and susceptibility to pneumococcal disease in European and African populations. Genes and immunity, 11 (4). pp. 319-25. ISSN 1466-4879 DOI: https://doi.org/10.1038/gene.2009.76 Full text not available from this repository.

Edwards, T; Scott, AG; Munyoki, G; Odera, VM; Chengo, E; Bauni, E; Kwasa, T; Sander, LW; Neville, BG; Newton, CR; (2007) Active convulsive epilepsy in a rural district of Kenya: a study of prevalence and possible risk factors. Lancet neurology, 7 (1). pp. 50-6. ISSN 1474-4422 DOI: https://doi.org/10.1016/S1474-4422(07)70292-2 Full text not available from this repository.

Feikin, DR; Scott, JA; Gessner, BD; (2014) Use of vaccines as probes to define disease burden. Lancet, 383 (9930). pp. 1762-70. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(13)61682-7 Full text not available from this repository.

Grant, LR; Hammitt, LL; Murdoch, DR; O'Brien, KL; Scott, JA; (2012) Procedures for collection of induced sputum specimens from children. Clinical infectious diseases, 54 Sup. S140-5. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1069 Full text not available from this repository.

Hammitt, LL; Kazungu, S; Morpeth, SC; Gibson, DG; Mvera, B; Brent, AJ; Mwarumba, S; Onyango, CO; Bett, A; Akech, DO; +3 more... Murdoch, DR; Nokes, DJ; Scott, JA; (2012) A preliminary study of pneumonia etiology among hospitalized children in Kenya. Clinical infectious diseases, 54 Sup. S190-9. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1071 Full text not available from this repository.

Hammitt, LL; Kazungu, S; Welch, S; Bett, A; Onyango, CO; Gunson, RN; Scott, JA; Nokes, DJ; (2011) Added value of an oropharyngeal swab in detection of viruses in children hospitalized with lower respiratory tract infection. Journal of clinical microbiology, 49 (6). pp. 2318-20. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02605-10 Full text not available from this repository.

Hart, JD; Street, T; Wrightson, JM; Moore, DP; Scott, AG; Crook, DW; Turner, GD; (2014) Infectious Diseases and Tropical Disease Pathology: SC16-1 rRNA SEQUENCING IN MOLECULAR MICROBIOLOGICAL DIAGNOSIS OF BACTERIAL INFECTIONS IN THE AUTOPSY SETTING. Pathology, 46 Sup. S26. ISSN 0031-3025 DOI: https://doi.org/10.1097/01.PAT.0000454139.86780.3b Full text not available from this repository.

Head, MG; Fitchett, JR; Newell, ML; Scott, JA; Clarke, SC; Atun, R; (2014) Investment in pneumonia and pneumococcal research. The Lancet infectious diseases, 14 (11). pp. 1037-8. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(14)70949-1 Full text not available from this repository.

Khor, CC; Chapman, SJ; Vannberg, FO; Dunne, A; Murphy, C; Ling, EY; Frodsham, AJ; Walley, AJ; Kyrieleis, O; Khan, A; +24 more... Aucan, C; Segal, S; Moore, CE; Knox, K; Campbell, SJ; Lienhardt, C; Scott, JAG; Aaby, P; Sow, OY; Grignani, RT; Sillah, J; Sirugo, G; Peshu, N; Williams, TN; Maitland, K; Davies, RJ; Kwiatkowski, DP; Day, NP; Yala, D; Crook, DW; Marsh, K; Berkley, JA; O'Neill, LA; Hill, AV; (2007) A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis. Nature genetics, 39 (4). pp. 523-8. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng1976 Full text not available from this repository.

Khor, CC; Vannberg, FO; Chapman, SJ; Walley, A; Aucan, C; Loke, H; White, NJ; Peto, T; Khor, LK; Kwiatkowski, D; +8 more... Day, N; Scott, A; Berkley, JA; Marsh, K; Peshu, N; Maitland, K; Williams, TN; Hill, AV; (2007) Positive replication and linkage disequilibrium mapping of the chromosome 21q22.1 malaria susceptibility locus. Genes and immunity, 8 (7). pp. 570-6. ISSN 1466-4879 DOI: https://doi.org/10.1038/sj.gene.6364417 Full text not available from this repository.

Knoll, MD; Moïsi, JC; Muhib, FB; Wonodi, CB; Lee, EH; Grant, L; Gilani, Z; Anude, CJ; O'Brien, KL; Cherian, T; +2 more... Levine, OS; PneumoADIP-Sponsored Surveillance Investigators, . (Incd. Scott,; (2009) Standardizing surveillance of pneumococcal disease. Clinical infectious diseases, 48 Sup. S37-48. ISSN 1058-4838 DOI: https://doi.org/10.1086/596480 Full text not available from this repository.

Laine, C; Mwangi, T; Thompson, CM; Obiero, J; Lipsitch, M; Scott, JA; (2004) Age-specific immunoglobulin g (IgG) and IgA to pneumococcal protein antigens in a population in coastal kenya. Infection and immunity, 72 (6). pp. 3331-5. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.72.6.3331-3335.2004 Full text not available from this repository.

Levine, OS; O'Brien, KL; Knoll, M; Adegbola, RA; Black, S; Cherian, T; Dagan, R; Goldblatt, D; Grange, A; Greenwood, B; +11 more... Hennessy, T; Klugman, KP; Madhi, SA; Mulholland, K; Nohynek, H; Santosham, M; Saha, SK; Scott, JA; Sow, S; Whitney, CG; Cutts, F; (2006) Pneumococcal vaccination in developing countries. Lancet, 367 (9526). pp. 1880-1882. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(06)68703-5 Full text not available from this repository.

Lipsitch, M; Abdullahi, O; DʼAmour, A; Xie, W; Weinberger, DM; Tchetgen Tchetgen, E; Scott, JA; (2012) Estimating rates of carriage acquisition and clearance and competitive ability for pneumococcal serotypes in Kenya with a Markov transition model. Epidemiology (Cambridge, Mass), 23 (4). pp. 510-9. ISSN 1044-3983 DOI: https://doi.org/10.1097/EDE.0b013e31824f2f32 Full text not available from this repository.

McAuley, CF; Webb, C; Makani, J; Macharia, A; Uyoga, S; Opi, DH; Ndila, C; Ngatia, A; Scott, JA; Marsh, K; +1 more... Williams, TN; (2010) High mortality from Plasmodium falciparum malaria in children living with sickle cell anemia on the coast of Kenya. Blood, 116 (10). pp. 1663-8. ISSN 0006-4971 DOI: https://doi.org/10.1182/blood-2010-01-265249 Full text not available from this repository.

Moïsi, JC; Saha, SK; Falade, AG; Njanpop-Lafourcade, BM; Oundo, J; Zaidi, AK; Afroj, S; Bakare, RA; Buss, JK; Lasi, R; +7 more... Mueller, J; Odekanmi, AA; Sangaré, L; Scott, JA; Knoll, MD; Levine, OS; Gessner, BD; (2009) Enhanced diagnosis of pneumococcal meningitis with use of the Binax NOW immunochromatographic test of Streptococcus pneumoniae antigen: a multisite study. Clinical infectious diseases, 48 Sup. S49-56. ISSN 1058-4838 DOI: https://doi.org/10.1086/596481 Full text not available from this repository.

Murdoch, DR; O'Brien, KL; Scott, JA; Karron, RA; Bhat, N; Driscoll, AJ; Knoll, MD; Levine, OS; (2009) Breathing new life into pneumonia diagnostics. Journal of clinical microbiology, 47 (11). pp. 3405-8. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01685-09 Full text not available from this repository.

Nair, H; Simões, EA; Rudan, I; Gessner, BD; Azziz-Baumgartner, E; Zhang, JS; Feikin, DR; Mackenzie, GA; Moïsi, JC; Roca, A; +27 more... Baggett, HC; Zaman, SM; Singleton, RJ; Lucero, MG; Chandran, A; Gentile, A; Cohen, C; Krishnan, A; Bhutta, ZA; Arguedas, A; Clara, AW; Andrade, AL; Ope, M; Ruvinsky, RO; Hortal, M; McCracken, JP; Madhi, SA; Bruce, N; Qazi, SA; Morris, SS; El Arifeen, S; Weber, MW; Scott, JA; Brooks, WA; Breiman, RF; Campbell, H; Severe Acute Lower Respiratory Infections Working Group; (2013) Global and regional burden of hospital admissions for severe acute lower respiratory infections in young children in 2010: a systematic analysis. Lancet, 381 (9875). pp. 1380-90. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(12)61901-1 Full text not available from this repository.

Nokes, DJ; Ngama, M; Bett, A; Abwao, J; Munywoki, P; English, M; Scott, JA; Cane, PA; Medley, GF; (2009) Incidence and severity of respiratory syncytial virus pneumonia in rural Kenyan children identified through hospital surveillance. Clinical infectious diseases, 49 (9). pp. 1341-9. ISSN 1058-4838 DOI: https://doi.org/10.1086/606055 Full text not available from this repository.

Nurkka, A; Obiero, J; Käyhty, H; Scott, JA; (2003) Effects of sample collection and storage methods on antipneumococcal immunoglobulin A in saliva. Clinical and diagnostic laboratory immunology, 10 (3). pp. 357-61. ISSN 1071-412X DOI: https://doi.org/10.1128/CDLI.10.3.357-361.2003 Full text not available from this repository.

Scott, JA; (2007) The preventable burden of pneumococcal disease in the developing world. Vaccine, 25 (13). pp. 2398-405. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2006.09.008 Full text not available from this repository.

Scott, JA; Mlacha, Z; Nyiro, J; Njenga, S; Lewa, P; Obiero, J; Otieno, H; Sampson, JS; Carlone, GM; (2005) Diagnosis of invasive pneumococcal disease among children in Kenya with enzyme-linked immunosorbent assay for immunoglobulin G antibodies to pneumococcal surface adhesin A. Clinical and diagnostic laboratory immunology, 12 (10). pp. 1195-201. ISSN 1071-412X DOI: https://doi.org/10.1128/CDLI.12.10.1195-1201.2005 Full text not available from this repository.

Scott, JA; Mwarumba, S; Ngetsa, C; Njenga, S; Lowe, BS; Slack, MP; Berkley, JA; Mwangi, I; Maitland, K; English, M; +1 more... Marsh, K; (2005) Progressive increase in antimicrobial resistance among invasive isolates of Haemophilus influenzae obtained from children admitted to a hospital in Kilifi, Kenya, from 1994 to 2002. Antimicrobial agents and chemotherapy, 49 (7). pp. 3021-4. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.49.7.3021-3024.2005 Full text not available from this repository.

Scott, JAG; Obiero, J; Hall, AJ; Marsh, K; (2002) Validation of immunoglobulin G enzyme-linked Immunosorbent assay for antibodies to pneumococcal surface adhesin A in the diagnosis of pneumococcal pneumonia among adults in Kenya. The Journal of infectious diseases, 186 (2). pp. 220-6. ISSN 0022-1899 DOI: https://doi.org/10.1086/341205 Full text not available from this repository.

Shann, F; Nohynek, H; Scott, JA; Hesseling, A; Flanagan, KL; Working Group on Nonspecific Effects of Vaccines; (2010) Randomized trials to study the nonspecific effects of vaccines in children in low-income countries. The Pediatric infectious disease journal, 29 (5). pp. 457-61. ISSN 0891-3668 DOI: https://doi.org/10.1097/INF.0b013e3181c91361 Full text not available from this repository.

Webb, C; Ngama, M; Ngatia, A; Shebbe, M; Morpeth, S; Mwarumba, S; Bett, A; Nokes, DJ; Seale, AC; Kazungu, S; +4 more... Munywoki, P; Hammitt, LL; Scott, JA; Berkley, JA; (2012) Treatment failure among Kenyan children with severe pneumonia--a cohort study. The Pediatric infectious disease journal, 31 (9). e152-7. ISSN 0891-3668 DOI: https://doi.org/10.1097/INF.0b013e3182638012 Full text not available from this repository.

Weinberger, DM; Harboe, ZB; Sanders, EA; Ndiritu, M; Klugman, KP; Rückinger, S; Dagan, R; Adegbola, R; Cutts, F; Johnson, HL; +3 more... O'Brien, KL; Scott, JA; Lipsitch, M; (2010) Association of serotype with risk of death due to pneumococcal pneumonia: a meta-analysis. Clinical infectious diseases, 51 (6). pp. 692-9. ISSN 1058-4838 DOI: https://doi.org/10.1086/655828 Full text not available from this repository.

Willcocks, LC; Carr, EJ; Niederer, HA; Rayner, TF; Williams, TN; Yang, W; Scott, JA; Urban, BC; Peshu, N; Vyse, TJ; +3 more... Lau, YL; Lyons, PA; Smith, KG; (2010) A defunctioning polymorphism in FCGR2B is associated with protection against malaria but susceptibility to systemic lupus erythematosus. Proceedings of the National Academy of Sciences of the United States of America, 107 (17). pp. 7881-5. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.0915133107 Full text not available from this repository.

Wonodi, CB; Deloria-Knoll, M; Feikin, DR; DeLuca, AN; Driscoll, AJ; Moïsi, JC; Johnson, HL; Murdoch, DR; O'Brien, KL; Levine, OS; +2 more... Scott, JA; Pneumonia Methods Working Group and PERCH Site Investigators; (2012) Evaluation of risk factors for severe pneumonia in children: the Pneumonia Etiology Research for Child Health study. Clinical infectious diseases, 54 Sup. S124-31. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1067 Full text not available from this repository.

Public

Abdullahi, O; Karani, A; Tigoi, CC; Mugo, D; Kungu, S; Wanjiru, E; Jomo, J; Musyimi, R; Lipsitch, M; Scott, JA; (2012) Rates of acquisition and clearance of pneumococcal serotypes in the nasopharynges of children in Kilifi District, Kenya. The Journal of infectious diseases, 206 (7). pp. 1020-9. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis447
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Abdullahi, O; Karani, A; Tigoi, CC; Mugo, D; Kungu, S; Wanjiru, E; Jomo, J; Musyimi, R; Lipsitch, M; Scott, JA; (2012) The prevalence and risk factors for pneumococcal colonization of the nasopharynx among children in Kilifi District, Kenya. PloS one, 7 (2). e30787. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0030787
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Adetifa, IM; Bwanaali, T; Wafula, J; Mutuku, A; Karia, B; Makumi, A; Mwatsuma, P; Bauni, E; Hammitt, LL; Nokes, DJ; +6 more... Maree, E; Tabu, C; Kamau, T; Mataza, C; Williams, TN; Scott, JA; (2016) Cohort Profile: The Kilifi Vaccine Monitoring Study. International journal of epidemiology. ISSN 0300-5771 DOI: https://doi.org/10.1093/ije/dyw202
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Adetifa, IMO; Adamu, AL; Karani, A; Waithaka, M; Odeyemi, KA; Okoromah, CAN; Bello, MM; Abubakar, IS; Inem, V; Scott, JAG; (2018) Nasopharyngeal Pneumococcal Carriage in Nigeria: a two-site, population-based survey. Scientific reports, 8 (1). p. 3509. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-21837-5
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Adetifa, Ifedayo MO; Karia, Boniface; Mutuku, Alex; Bwanaali, Tahreni; Makumi, Anne; Wafula, Jackline; Chome, Martina; Mwatsuma, Pauline; Bauni, Evasius; Hammitt, Laura L; +5 more... Mataza, Christine; Tabu, Collins; Kamau, Tatu; Williams, Thomas N; Scott, J Anthony G; (2018) Coverage and timeliness of vaccination and the validity of routine estimates: Insights from a vaccine registry in Kenya. Vaccine. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2018.11.005
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Aiken, AM; Mturi, N; Njuguna, P; Mohammed, S; Berkley, JA; Mwangi, I; Mwarumba, S; Kitsao, BS; Lowe, BS; Morpeth, SC; +25 more... Hall, AJ; Khandawalla, I; Scott, JA; Kilifi Bacteraemia Surveillance Group; , COLLABORATORS; Ahmed, I; Akech, S; Makazi, AB; Hajj, MB; Brent, A; Chesaro, C; Dayo, H; Idro, R; Kosgei, P; Maitland, K; Marsh, K; Mwalekwa, L; Mwaringa, S; Newton, C; Ngama, M; Pamba, A; Peshu, N; Seale, A; Talbert, A; Williams, T; (2011) Risk and causes of paediatric hospital-acquired bacteraemia in Kilifi District Hospital, Kenya: a prospective cohort study. Lancet, 378 (9808). pp. 2021-7. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(11)61622-X
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Aiken, AM; Mutuku, IM; Sabat, AJ; Akkerboom, V; Mwangi, J; Scott, JA; Morpeth, SC; Friedrich, AW; Grundmann, H; (2014) Carriage of Staphylococcus aureus in Thika Level 5 Hospital, Kenya: a cross-sectional study. Antimicrobial resistance and infection control, 3. p. 22. ISSN 2047-2994 DOI: https://doi.org/10.1186/2047-2994-3-22
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Aiken, AM; Wanyoro, AK; Mwangi, J; Mulingwa, P; Wanjohi, J; Njoroge, J; Juma, F; Mugoya, IK; Scott, JA; Hall, AJ; (2013) Evaluation of surveillance for surgical site infections in Thika Hospital, Kenya. The Journal of hospital infection, 83 (2). pp. 140-5. ISSN 0195-6701 DOI: https://doi.org/10.1016/j.jhin.2012.11.003
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Akumu, AO; English, M; Scott, JA; Griffiths, UK; (2007) Economic evaluation of delivering Haemophilus influenzae type b vaccine in routine immunization services in Kenya. Bulletin of the World Health Organization, 85 (7). pp. 511-8. ISSN 0042-9686 DOI: https://doi.org/10.2471/blt.06.034686
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Anderson, ST; Kaforou, M; Brent, AJ; Wright, VJ; Banwell, CM; Chagaluka, G; Crampin, AC; Dockrell, HM; French, N; Hamilton, MS; +16 more... Hibberd, ML; Kern, F; Langford, PR; Ling, L; Mlotha, R; Ottenhoff, TH; Pienaar, S; Pillay, V; Scott, JA; Twahir, H; Wilkinson, RJ; Coin, LJ; Heyderman, RS; Levin, M; Eley, B; ILULU Consortium and KIDS TB Study Group; (2014) Diagnosis of childhood tuberculosis and host RNA expression in Africa. The New England journal of medicine, 370 (18). pp. 1712-23. ISSN 0028-4793 DOI: https://doi.org/10.1056/NEJMoa1303657
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Barger-Kamate, B; Deloria Knoll, M; Kagucia, EW; Prosperi, C; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SR; Levine, OS; +62 more... Madhi, SA; Scott, JA; Thea, DM; Amornintapichet, T; Anderson, TP; Awori, JO; Baillie, VL; Chipeta, J; DeLuca, AN; Driscoll, AJ; Goswami, D; Higdon, MM; Hossain, L; Karron, RA; Maloney, S; Moore, DP; Morpeth, SC; Mwananyanda, L; Ofordile, O; Olutunde, E; Park, DE; Sow, SO; Tapia, MD; Murdoch, DR; O'Brien, KL; Kotloff, KL; Pneumonia Etiology Research for Child Health (PERCH) Study Group; , COLLABORATORS; Ashraf, H; Ahmed, D; Endtz, H; Jahan, Y; Zaman, K; Adrian, PV; Mudau, A; Kuwanda, L; Groome, MJ; Antonio, M; Ebruke, BE; Mackenzie, G; McLellan, J; Machuka, EM; Shamsul, A; Zaman, SM; Fu, W; Li, M; Bunthi, C; Sawatwong, P; Akarasewi, P; Rhodes, J; Thamthitiwat, S; Duncan, J; Mwansa, J; Somwe, SW; Kazungu, S; Kamau, A; Kwenda, G; Onwuchekwa, U; Tamboura, B; Sylla, M; Seidenberg, P; Zeger, S; (2016) Pertussis-Associated Pneumonia in Infants and Children From Low- and Middle-Income Countries Participating in the PERCH Study. Clinical infectious diseases, 63 (suppl). S187-S196. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciw546
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Bejon, P; Berkley, JA; Mwangi, T; Ogada, E; Mwangi, I; Maitland, K; Williams, T; Scott, JA; English, M; Lowe, BS; +3 more... Peshu, N; Newton, CR; Marsh, K; (2007) Defining childhood severe falciparum malaria for intervention studies. PLoS medicine, 4 (8). e251. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.0040251
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Berkley, JA; Lowe, BS; Mwangi, I; Williams, T; Bauni, E; Mwarumba, S; Ngetsa, C; Slack, MP; Njenga, S; Hart, CA; +4 more... Maitland, K; English, M; Marsh, K; Scott, JA; (2005) Bacteremia among children admitted to a rural hospital in Kenya. The New England journal of medicine, 352 (1). pp. 39-47. ISSN 0028-4793 DOI: https://doi.org/10.1056/NEJMoa040275
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Berkley, JA; Maitland, K; Mwangi, I; Ngetsa, C; Mwarumba, S; Lowe, BS; Newton, CR; Marsh, K; Scott, JA; English, M; (2005) Use of clinical syndromes to target antibiotic prescribing in seriously ill children in malaria endemic area: observational study. BMJ (Clinical research ed), 330 (7498). p. 995. ISSN 0959-8138 DOI: https://doi.org/10.1136/bmj.38408.471991.8F
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Brent, AJ; Mugo, D; Musyimi, R; Mutiso, A; Morpeth, S; Levin, M; Scott, JAG; (2017) Bacteriological diagnosis of childhood TB: a prospective observational study. Scientific reports, 7 (1). p. 11808. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-11969-5
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Brent, AJ; Mugo, D; Musyimi, R; Mutiso, A; Morpeth, SC; Levin, M; Scott, JAG; (2018) Author Correction: Bacteriological diagnosis of childhood TB: a prospective observational study. Nature Research (part of Springer Nature). DOI: https://doi.org/10.1038/s41598-018-25250-w
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Brent, AJ; Nyundo, C; Langat, J; Mulunda, C; Wambua, J; Bauni, E; Sande, J; Park, K; Williams, TN; Newton, CRJ; +14 more... Levin, M; Scott, JAG; KIDS TB Study Group; , COLLABORATORS; Bandika, V; Berkley, J; Maitland, K; Morpeth, S; Mugo, D; Musyimi, R; Mutiso, A; Odhiambo, JP; Toroitich, M; Twahir, H; (2018) Prospective Observational Study of Incidence and Preventable Burden of Childhood Tuberculosis, Kenya. Emerging infectious diseases, 24 (3). pp. 514-523. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2403.170785
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Brueggemann, AB; Muroki, BM; Kulohoma, BW; Karani, A; Wanjiru, E; Morpeth, S; Kamau, T; Sharif, S; Scott, JA; (2013) Population Genetic Structure of Streptococcus pneumoniae in Kilifi, Kenya, Prior to the Introduction of Pneumococcal Conjugate Vaccine. PloS one, 8 (11). e81539. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0081539
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Burton, DC; Bigogo, GM; Audi, AO; Williamson, J; Munge, K; Wafula, J; Ouma, D; Khagayi, S; Mugoya, I; Mburu, J; +16 more... Muema, S; Bauni, E; Bwanaali, T; Feikin, DR; Ochieng, PM; Mogeni, OD; Otieno, GA; Olack, B; Kamau, T; Van Dyke, MK; Chen, R; Farrington, P; Montgomery, JM; Breiman, RF; Scott, JA; Laserson, KF; (2015) Risk of Injection-Site Abscess among Infants Receiving a Preservative-Free, Two-Dose Vial Formulation of Pneumococcal Conjugate Vaccine in Kenya. PloS one, 10 (10). e0141896. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0141896
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Chapman, SJ; Khor, CC; Vannberg, FO; Rautanen, A; Walley, A; Segal, S; Moore, CE; Davies, RJ; Day, NP; Peshu, N; +5 more... Crook, DW; Berkley, JA; Williams, TN; Scott, JA; Hill, AV; (2010) Common NFKBIL2 polymorphisms and susceptibility to pneumococcal disease: a genetic association study. Critical care (London, England), 14 (6). R227. ISSN 1364-8535 DOI: https://doi.org/10.1186/cc9377
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Cowgill, KD; Ndiritu, M; Nyiro, J; Slack, MP; Chiphatsi, S; Ismail, A; Kamau, T; Mwangi, I; English, M; Newton, CR; +2 more... Feikin, DR; Scott, JA; (2006) Effectiveness of Haemophilus influenzae type b Conjugate vaccine introduction into routine childhood immunization in Kenya. JAMA, 296 (6). pp. 671-8. ISSN 0098-7484 DOI: https://doi.org/10.1001/jama.296.6.671
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Crawley, J; Prosperi, C; Baggett, HC; Brooks, WA; Deloria Knoll, M; Hammitt, LL; Howie, SRC; Kotloff, KL; Levine, OS; Madhi, SA; +93 more... Murdoch, DR; O’Brien, KL; Thea, DM; Awori, JO; Bunthi, C; Deluca, AN; Driscoll, AJ; Ebruke, BE; Goswami, D; Hidgon, MM; Karron, RA; Kazungu, S; Kourouma, N; MacKenzie, G; Moore, DP; Mudau, A; Mwale, M; Nahar, K; Park, DE; Piralam, B; Seidenberg, P; Sylla, M; Feikin, DR; Scott, JAG; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; (2017) Standardization of Clinical Assessment and Sample Collection Across All PERCH Study Sites. Clinical infectious diseases, 64 (suppl_). S228-S237. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix077
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Deloria Knoll, M; Fu, W; Shi, Q; Prosperi, C; Wu, Z; Hammitt, LL; Feikin, DR; Baggett, HC; Howie, SRC; Scott, JAG; +11 more... Murdoch, DR; Madhi, SA; Thea, DM; Brooks, WA; Kotloff, KL; LI, M; Park, DE; Lin, W; Levine, OS; O’Brien, KL; Zeger, SL; (2017) Bayesian Estimation of Pneumonia Etiology: Epidemiologic Considerations and Applications to the Pneumonia Etiology Research for Child Health Study. Clinical infectious diseases, 64 (suppl_). S213-S227. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix144
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Deloria Knoll, M; Morpeth, SC; Scott, JAG; Watson, NL; Park, DE; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; +100 more... Kotloff, KL; Levine, OS; O’Brien, KL; Thea, DM; Ahmed, D; Antonio, M; Awori, JO; Baillie, VL; Chipeta, J; Deluca, AN; Dione, M; Driscoll, AJ; Higdon, MM; Jatapai, A; Karron, RA; Mazumder, R; Moore, DP; Mwansa, J; Nyongesa, S; Prosperi, C; Seidenberg, P; Siludjai, D; Sow, SO; Tamboura, B; Zeger, SL; Murdoch, DR; Madhi, SA; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Evaluation of Pneumococcal Load in Blood by Polymerase Chain Reaction for the Diagnosis of Pneumococcal Pneumonia in Young Children in the PERCH Study. Clinical infectious diseases, 64 (suppl_). S357-S367. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix149
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Deloria-Knoll, M; Feikin, DR; Scott, JA; O'Brien, KL; DeLuca, AN; Driscoll, AJ; Levine, OS; Pneumonia Methods Working Group; (2012) Identification and selection of cases and controls in the Pneumonia Etiology Research for Child Health project. Clinical infectious diseases, 54 Sup. S117-23. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1066
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Deluca, AN; Hammitt, LL; Kim, J; Higdon, MM; Baggett, HC; Brooks, WA; Howie, SRC; Deloria Knoll, M; Kotloff, KL; Levine, OS; +94 more... Madhi, SA; Murdoch, DR; Scott, JAG; Thea, DM; Amornintapichet, T; Awori, JO; Chuananon, S; Driscoll, AJ; Ebruke, BE; Hossain, L; Jahan, Y; Kagucia, EW; Kazungu, S; Moore, DP; Mudau, A; Mwananyanda, L; Park, DE; Prosperi, C; Seidenberg, P; Sylla, M; Tapia, MD; Zaman, SMA; O’Brien, KL; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Silaba, M; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; (2017) Safety of Induced Sputum Collection in Children Hospitalized With Severe or Very Severe Pneumonia. Clinical infectious diseases, 64 (suppl_). S301-S308. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix078
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Driscoll, AJ; Deloria Knoll, M; Hammitt, LL; Baggett, HC; Brooks, WA; Feikin, DR; Kotloff, KL; Levine, OS; Madhi, SA; O’Brien, KL; +98 more... Scott, JAG; Thea, DM; Howie, SRC; Adrian, PV; Ahmed, D; Deluca, AN; Ebruke, BE; Gitahi, C; Higdon, MM; Kaewpan, A; Karani, A; Karron, RA; Mazumder, R; McLellan, J; Moore, DP; Mwananyanda, L; Park, DE; Prosperi, C; Rhodes, J; Saifullah, M; Seidenberg, P; Sow, SO; Tamboura, B; Zeger, SL; Murdoch, DR; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) The Effect of Antibiotic Exposure and Specimen Volume on the Detection of Bacterial Pathogens in Children With Pneumonia. Clinical infectious diseases, 64 (suppl_). S368-S377. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix101
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Driscoll, AJ; Karron, RA; Morpeth, SC; Bhat, N; Levine, OS; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; +33 more... Knoll, MD; Kotloff, KL; Madhi, SA; Scott, JAG; Thea, DM; Adrian, PV; Ahmed, D; Alam, M; Anderson, TP; Antonio, M; Baillie, VL; Dione, M; Endtz, HP; Gitahi, C; Karani, A; Kwenda, G; Maiga, AA; McClellan, J; Mitchell, JL; Morailane, P; Mugo, D; Mwaba, J; Mwansa, J; Mwarumba, S; Nyongesa, S; Panchalingam, S; Rahman, M; Sawatwong, P; Tamboura, B; Toure, A; Whistler, T; O’Brien, KL; Murdoch, DR; (2017) Standardization of Laboratory Methods for the PERCH Study. Clinical infectious diseases, 64 (suppl_). S245-S252. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix081
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Etyang, AO; Khayeka-Wandabwa, C; Kapesa, S; Muthumbi, E; Odipo, E; Wamukoya, M; Ngomi, N; Haregu, T; Kyobutungi, C; Tendwa, M; +6 more... Makale, J; Macharia, A; Cruickshank, JK; Smeeth, L; Scott, JA; Williams, TN; (2017) Blood Pressure and Arterial Stiffness in Kenyan Adolescents With α(+)Thalassemia. Journal of the American Heart Association, 6 (4). ISSN 2047-9980 DOI: https://doi.org/10.1161/JAHA.117.005613
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Etyang, AO; Munge, K; Bunyasi, EW; Matata, L; Ndila, C; Kapesa, S; Owiti, M; Khandwalla, I; Brent, AJ; Tsofa, B; +11 more... Kabibu, P; Morpeth, S; Bauni, E; Otiende, M; Ojal, J; Ayieko, P; Knoll, MD; Smeeth, L; Williams, TN; Griffiths, UK; Scott, JA; (2014) Burden of disease in adults admitted to hospital in a rural region of coastal Kenya: an analysis of data from linked clinical and demographic surveillance systems. The Lancet Global health, 2 (4). e216-24. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(14)70023-3
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Etyang, AO; Munge, K; Bunyasi, EW; Matata, L; Ndila, C; Kapesa, S; Owiti, M; Khandwalla, I; Brent, AJ; Tsofa, B; +11 more... Kabibu, P; Morpeth, S; Bauni, E; Otiende, M; Ojal, J; Ayieko, P; Knoll, MD; Smeeth, L; Williams, TN; Griffiths, UK; Scott, JAG; (2014) Burden of disease in adults admitted to hospital in a rural region of coastal Kenya: an analysis of data from linked clinical and demographic surveillance systems. The Lancet Global Health, 2 (4). e216-e224. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(14)70023-3
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Etyang, AO; Smeeth, L; Cruickshank, JK; Scott, JA; (2016) The Malaria-High Blood Pressure Hypothesis. Circulation research, 119 (1). pp. 36-40. ISSN 0009-7330 DOI: https://doi.org/10.1161/CIRCRESAHA.116.308763
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Etyang, AO; Wandabwa, CK; Kapesa, S; Muthumbi, E; Odipo, E; Wamukoya, M; Ngomi, N; Haregu, T; Kyobutungi, C; Williams, TN; +5 more... Makale, J; Macharia, A; Cruickshank, JK; Smeeth, L; Scott, JAG; (2017) Blood Pressure and Arterial Stiffness in Kenyan Adolescents with the Sickle Cell Trait. American journal of epidemiology. ISSN 0002-9262 DOI: https://doi.org/10.1093/aje/kwx232
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Etyang, Anthony; Kapesa, Sailoki; Odipo, Emily; Bauni, Evasius; Kyobutungi, Catherine; Abdalla, Marwah; Muntner, Paul; Musani, Solomon K; Macharia, Alex; Williams, Thomas N; +3 more... Cruickshank, J Kennedy; Smeeth, Liam; Scott, Anthony; (2019) Effect of Previous Exposure to Malaria on Blood Pressure in Kilifi, Kenya: A Mendelian Randomization Study. Journal of the American Heart Association, 8 (6). ISSN 2047-9980 DOI: https://doi.org/10.1161/JAHA.118.011771
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Fancourt, N; Deloria Knoll, M; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; Kotloff, KL; Levine, OS; Madhi, SA; +96 more... Murdoch, DR; Scott, JAG; Thea, DM; Awori, JO; Barger-Kamate, B; Chipeta, J; Deluca, AN; Diallo, M; Driscoll, AJ; Ebruke, BE; Higdon, MM; Jahan, Y; Karron, RA; Mahomed, N; Moore, DP; Nahar, K; Naorat, S; Ominde, MS; Park, DE; Prosperi, C; Wa Somwe, S; Thamthitiwat, S; Zaman, SMA; Zeger, SL; O’Brien, KL; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; (2017) Chest Radiograph Findings in Childhood Pneumonia Cases From the Multisite PERCH Study. Clinical infectious diseases, 64 (suppl_). S262-S270. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix089
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Feikin, DR; Fu, W; Park, DE; Shi, Q; Higdon, MM; Baggett, HC; Brooks, WA; Deloria Knoll, M; Hammitt, LL; Howie, SRC; +100 more... Kotloff, KL; Levine, OS; Madhi, SA; Scott, JAG; Thea, DM; Adrian, PV; Antonio, M; Awori, JO; Baillie, VL; Deluca, AN; Driscoll, AJ; Ebruke, BE; Goswami, D; Karron, RA; LI, M; Morpeth, SC; Mwaba, J; Mwansa, J; Prosperi, C; Sawatwong, P; Sow, SO; Tapia, MD; Whistler, T; Zaman, K; Zeger, SL; O’ Brien, KL; Murdoch, DR; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Is Higher Viral Load in the Upper Respiratory Tract Associated With Severe Pneumonia? Findings From the PERCH Study. Clinical infectious diseases, 64 (suppl_). S337-S346. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix148
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Feikin, DR; Hammitt, LL; Murdoch, DR; O’Brien, KL; Scott, JAG; (2017) The Enduring Challenge of Determining Pneumonia Etiology in Children: Considerations for Future Research Priorities. Clinical infectious diseases, 64 (suppl_). S188-S196. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix143
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Gilani, Z; Kwong, YD; Levine, OS; Deloria-Knoll, M; Scott, JA; O'Brien, KL; Feikin, DR; (2012) A literature review and survey of childhood pneumonia etiology studies: 2000-2010. Clinical infectious diseases, 54 Sup. S102-8. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1053
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Gilchrist, JJ; Mentzer, AJ; Rautanen, A; Pirinen, M; Mwarumba, S; Njuguna, P; Mturi, N; Wellcome Trust Case-Control Consortium 2; Kenyan Bacteraemia Study Group; Williams, TN; +119 more... Scott, JAG; Hill, AVS; , COLLABORATORS; Hill, AVS; Williams, TN; Scott, JAG; Chapman, SJ; Rautanen, A; Mills, TC; Rockett, K; Ndungu, AW; Naranbhai, V; Macharia, AW; Uyoga, S; Ndila, C; Mturi, N; Njuguna, P; Mohammed, S; Berkley, JA; Mwangi, I; Mwarumba, S; Kitsao, BS; Lowe, BS; Morpeth, SC; Khandwalla, I; Macharia, AW; Uyoga, S; Opi, H; Ndila, C; Nyatichi, E; Ingosi, P; Kitsao, B; Lewa, C; Makale, J; Mohamed, A; Magua, K; Njoroge, M; Nyutu, G; Mwarabu, R; Tendwa, M; Williams, TN; Ahmed, I; Akech, S; Makazi, AB; Hajj, MB; Brent, A; Chesaro, C; Dayo, H; Idro, R; Kosgei, P; Maitland, K; Marsh, K; Mwalekwa, L; Mwaringa, S; Newton, C; Ngama, M; Pamba, A; Peshu, N; Seale, A; Talbert, A; Williams, TN; Donnelly, P; Barroso, I; Blackwell, JM; Bramon, E; Brown, MA; Casas, JP; Corvin, A; Deloukas, P; Duncanson, A; Jankowski, J; Markus, HS; Mathew, CG; Palmer, CN; Plomin, R; Rautanen, A; Sawcer, SJ; Trembath, RC; Viswanathan, AC; Wood, NW; Spencer, CCA; Band, G; Bellenguez, C; Freeman, C; Hellenthal, G; Giannoulatou, E; Pirinen, M; Pearson, R; Strange, A; Su, Z; Vukcevic, D; Donnelly, P; Langford, C; Hunt, SE; Edkins, S; Gwilliam, R; Blackburn, H; Bumpstead, SJ; Dronov, S; Gillman, M; Gray, E; Hammond, N; Jayakumar, A; McCann, OT; Liddle, J; Potter, SC; Ravindrarajah, R; Ricketts, M; Waller, M; Weston, P; Widaa, S; Whittaker, P; Barroso, I; Deloukas, P; Mathew, CG; Blackwell, JM; Brown, MA; Corvin, A; Spencer, CCA; (2018) Genetic variation in VAC14 is associated with bacteremia secondary to diverse pathogens in African children. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1802071115
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Gilchrist, JJ; Rautanen, A; Fairfax, BP; Mills, TC; Naranbhai, V; Trochet, H; Pirinen, M; Muthumbi, E; Mwarumba, S; Njuguna, P; +12 more... Mturi, N; Msefula, CL; Gondwe, EN; MacLennan, JM; Chapman, SJ; Molyneux, ME; Knight, JC; Spencer, CCA; Williams, TN; MacLennan, CA; Scott, JAG; Hill, AVS; (2018) Risk of nontyphoidal Salmonella bacteraemia in African children is modified by STAT4. Nature communications, 9 (1). p. 1014. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-017-02398-z
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Hammitt, LL; Akech, DO; Morpeth, SC; Karani, A; Kihuha, N; Nyongesa, S; Bwanaali, T; Mumbo, E; Kamau, T; Sharif, SK; +1 more... Scott, JA; (2014) Population effect of 10-valent pneumococcal conjugate vaccine on nasopharyngeal carriage of Streptococcus pneumoniae and non-typeable Haemophilus influenzae in Kilifi, Kenya: findings from cross-sectional carriage studies. The Lancet Global health, 2 (7). e397-405. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(14)70224-4
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Hammitt, LL; Crane, RJ; Karani, A; Mutuku, A; Morpeth, SC; Burbidge, P; Goldblatt, D; Kamau, T; Sharif, S; Mturi, N; +1 more... Scott, JA; (2016) Effect of Haemophilus influenzae type b vaccination without a booster dose on invasive H influenzae type b disease, nasopharyngeal carriage, and population immunity in Kilifi, Kenya: a 15-year regional surveillance study. The Lancet Global health, 4 (3). e185-94. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(15)00316-2
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Hammitt, LL; Feikin, DR; Scott, JAG; Zeger, SL; Murdoch, DR; O’Brien, KL; Deloria Knoll, M; (2017) Addressing the Analytic Challenges of Cross-Sectional Pediatric Pneumonia Etiology Data. Clinical infectious diseases, 64 (suppl_). S197-S204. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix147
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Hammitt, LL; Murdoch, DR; Scott, JA; Driscoll, A; Karron, RA; Levine, OS; O'Brien, KL; Pneumonia Methods Working Group; (2012) Specimen collection for the diagnosis of pediatric pneumonia. Clinical infectious diseases, 54 Sup. S132-9. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1068
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Head, MG; Fitchett, JR; Newell, ML; Scott, JA; Harris, JN; Clarke, SC; Atun, R; (2015) Mapping pneumonia research: A systematic analysis of UK investments and published outputs 1997-2013. EBioMedicine, 2 (9). pp. 1193-9. ISSN 2352-3964 DOI: https://doi.org/10.1016/j.ebiom.2015.06.024
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Head, MG; Goss, S; Gelister, Y; Alegana, V; Brown, RJ; Clarke, SC; Fitchett, JRA; Atun, R; Scott, JAG; Newell, ML; +2 more... Padmadas, SS; Tatem, AJ; (2017) Global funding trends for malaria research in sub-Saharan Africa: a systematic analysis. The Lancet Global health. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(17)30245-0
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Henson, SP; Boinett, CJ; Ellington, MJ; Kagia, N; Mwarumba, S; Nyongesa, S; Mturi, N; Kariuki, S; Scott, JAG; Thomson, NR; +1 more... Morpeth, SC; (2017) Molecular epidemiology of Klebsiella pneumoniae invasive infections over a decade at Kilifi County Hospital in Kenya. International journal of medical microbiology, 307 (7). pp. 422-429. ISSN 1438-4221 DOI: https://doi.org/10.1016/j.ijmm.2017.07.006
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Higdon, MM; Hammitt, LL; Deloria Knoll, M; Baggett, HC; Brooks, WA; Howie, SRC; Kotloff, KL; Levine, OS; Madhi, SA; Murdoch, DR; +79 more... Scott, JAG; Thea, DM; Driscoll, AJ; Karron, RA; Park, DE; Prosperi, C; Zeger, SL; O'Brien, KL; Feikin, DR; PERCH Study Group; , COLLABORATORS; O'Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; DeLuca, AN; Driscoll, AJ; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; Li, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; Machuka, E; Shamsul, A; Zaman, SMA; Mackenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; (2017) Should Controls With Respiratory Symptoms Be Excluded From Case-Control Studies of Pneumonia Etiology? Reflections From the PERCH Study. Clinical infectious diseases, 64 (suppl_). S205-S212. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix076
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Higdon, MM; le, T; O’Brien, KL; Murdoch, DR; Prosperi, C; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; +100 more... Kotloff, KL; Levine, OS; Scott, JAG; Thea, DM; Awori, JO; Baillie, VL; Cascio, S; Chuananon, S; Deluca, AN; Driscoll, AJ; Ebruke, BE; Endtz, HP; Kaewpan, A; Kahn, G; Karani, A; Karron, RA; Moore, DP; Park, DE; Rahman, MZ; Salaudeen, R; Seidenberg, P; Somwe, SW; Sylla, M; Tapia, MD; Zeger, SL; Deloria Knoll, M; Madhi, SA; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Association of C-Reactive Protein With Bacterial and Respiratory Syncytial Virus–Associated Pneumonia Among Children Aged <5 Years in the PERCH Study. Clinical infectious diseases, 64 (suppl_). S378-S386. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix150
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Kamau, Alice; Mwangangi, Joseph M; Rono, Martin K; Mogeni, Polycarp; Omedo, Irene; Midega, Janet; Scott, J Anthony G; Bejon, Philip; (2018) Variation in the effectiveness of insecticide treated nets against malaria and outdoor biting by vectors in Kilifi, Kenya. Wellcome open research, 2. p. 22. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.11073.2
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Kamau, Alice; Mwangangi, Joseph; Rono, Martin; Mogeni, Polycarp; Omedo, Irene; Midega, Janet; Scott, Anthony; Bejon, Philip; (2018) Variation in the effectiveness of insecticide treated nets against malaria and outdoor biting by vectors in Kilifi, Kenya. Wellcome Open Research, 2. p. 22. DOI: https://doi.org/10.12688/wellcomeopenres.11073.4
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Kenyan Bacteraemia Study Group; Wellcome Trust Case Control Consortium 2 (WTCCC2); Rautanen, A; Pirinen, M; Mills, TC; Rockett, KA; Strange, A; Ndungu, AW; Naranbhai, V; Gilchrist, JJ; +50 more... Bellenguez, C; Freeman, C; Band, G; Bumpstead, SJ; Edkins, S; Giannoulatou, E; Gray, E; Dronov, S; Hunt, SE; Langford, C; Pearson, RD; Su, Z; Vukcevic, D; Macharia, AW; Uyoga, S; Ndila, C; Mturi, N; Njuguna, P; Mohammed, S; Berkley, JA; Mwangi, I; Mwarumba, S; Kitsao, BS; Lowe, BS; Morpeth, SC; Khandwalla, I; Kilifi Bacteraemia Surveillance Group; Blackwell, JM; Bramon, E; Brown, MA; Casas, JP; Corvin, A; Duncanson, A; Jankowski, J; Markus, HS; Mathew, CG; Palmer, CN; Plomin, R; Sawcer, SJ; Trembath, RC; Viswanathan, AC; Wood, NW; Deloukas, P; Peltonen, L; Williams, TN; Scott, JA; Chapman, SJ; Donnelly, P; Hill, AV; Spencer, CC; (2016) Polymorphism in a lincRNA Associates with a Doubled Risk of Pneumococcal Bacteremia in Kenyan Children. American journal of human genetics, 98 (6). pp. 1092-100. ISSN 0002-9297 DOI: https://doi.org/10.1016/j.ajhg.2016.03.025
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Khor, CC; Vannberg, FO; Chapman, SJ; Guo, HY; Wong, SH; Walley, AJ; Vukcevic, D; Rautanen, A; Mills, TC; Chang, KC; +25 more... Kam, KM; Crampin, AC; Ngwira, B; Leung, CC; Tam, CM; Chan, CY; Sung, JJY; Yew, WW; Toh, KY; Tay, SKH; Kwiatkowski, D; Lienhardt, C; Hien, TT; Day, NP; Peshu, N; Marsh, K; Maitland, K; Scott, JA; Williams, TN; Berkley, JA; Floyd, S; Tang, NLS; Fine, PEM; Goh, DLM; Hill, AVS; (2010) CISH and Susceptibility to Infectious Diseases. The New England journal of medicine, 362 (22). pp. 2092-2101. ISSN 0028-4793 DOI: https://doi.org/10.1056/NEJMoa0905606
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Kimaro Mlacha, SZ; Peret, TC; Umar, N; Romero-Steiner, S; Dunning Hotopp, JC; Ishmael, N; Grinblat-Huse, V; Riley, DR; Erdman, DD; Carlone, GM; +3 more... Sampson, J; Scott, JA; Tettelin, H; (2013) Transcriptional adaptation of pneumococci and human pharyngeal cells in the presence of a virus infection. BMC genomics, 14. p. 378. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-14-378
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Kimaro Mlacha, SZ; Warira, A; Gatakaa, H; Goldblatt, D; Scott, JAG; (2018) Outpacing the pneumococcus: Antibody dynamics in the first few days following pneumococcal capsular antigen stimulation. Scientific reports, 8 (1). p. 15376. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-33735-x
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Levine, OS; Bhat, N; Crawley, J; Deloria-Knoll, M; DeLuca, AN; Driscoll, AJ; Feikin, DR; Karron, RA; Murdoch, DR; O'Brien, KL; +1 more... Scott, JA; (2012) Pneumonia etiology research for child health. Introduction. Clinical infectious diseases, 54 Sup. S87-8. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1050
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Levine, OS; O'Brien, KL; Deloria-Knoll, M; Murdoch, DR; Feikin, DR; DeLuca, AN; Driscoll, AJ; Baggett, HC; Brooks, WA; Howie, SR; +6 more... Kotloff, KL; Madhi, SA; Maloney, SA; Sow, S; Thea, DM; Scott, JA; (2012) The Pneumonia Etiology Research for Child Health Project: a 21st century childhood pneumonia etiology study. Clinical infectious diseases, 54 Sup. S93-101. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1052
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Lundblom, K; Murungi, L; Nyaga, V; Olsson, D; Rono, J; Osier, F; Ogada, E; Montgomery, S; Scott, JA; Marsh, K; +1 more... Färnert, A; (2013) Plasmodium falciparum infection patterns since birth and risk of severe malaria: a nested case-control study in children on the coast of Kenya. PloS one, 8 (2). e56032. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0056032
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Lyons, EJ; Amos, W; Berkley, JA; Mwangi, I; Shafi, M; Williams, TN; Newton, CR; Peshu, N; Marsh, K; Scott, JA; +1 more... Hill, AV; (2009) Homozygosity and risk of childhood death due to invasive bacterial disease. BMC medical genetics, 10. p. 55. ISSN 1471-2350 DOI: https://doi.org/10.1186/1471-2350-10-55
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Macharia, AW; Mochamah, G; Uyoga, S; Ndila, CM; Nyutu, G; Makale, J; Tendwa, M; Nyatichi, E; Ojal, J; Shebe, M; +7 more... Awuondo, KO; Mturi, N; Peshu, N; Tsofa, B; Scott, JAG; Maitland, K; Williams, TN; (2017) The clinical epidemiology of sickle cell anemia in Africa. American journal of hematology. ISSN 0361-8609 DOI: https://doi.org/10.1002/ajh.24986
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Mlacha, SZ; Romero-Steiner, S; Hotopp, JC; Umar, N; Ishmael, N; Riley, DR; Farooq, U; Creasy, TH; Tallon, LJ; Liu, X; +6 more... Goldsmith, CS; Sampson, J; Carlone, GM; Hollingshead, SK; Scott, JA; Tettelin, H; (2013) Phenotypic, genomic, and transcriptional characterization of Streptococcus pneumoniae interacting with human pharyngeal cells. BMC genomics, 14. p. 383. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-14-383
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Morpeth, SC; Deloria Knoll, M; Scott, JAG; Park, DE; Watson, NL; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; +101 more... Kotloff, KL; Levine, OS; Madhi, SA; O’Brien, KL; Thea, DM; Adrian, PV; Ahmed, D; Antonio, M; Bunthi, C; Deluca, AN; Driscoll, AJ; Githua, LP; Higdon, MM; Kahn, G; Karani, A; Karron, RA; Kwenda, G; Makprasert, S; Mazumder, R; Moore, DP; Mwansa, J; Nyongesa, S; Prosperi, C; Sow, SO; Tamboura, B; Whistler, T; Zeger, SL; Murdoch, DR; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Detection of Pneumococcal DNA in Blood by Polymerase Chain Reaction for Diagnosing Pneumococcal Pneumonia in Young Children From Low- and Middle-Income Countries. Clinical infectious diseases, 64 (suppl_). S347-S356. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix145
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Morpeth, SC; Huggett, JF; Murdoch, DR; Scott, JA; (2014) Making standards for quantitative real-time pneumococcal PCR. Biomolecular detection and quantification, 2. pp. 1-3. ISSN 2214-7535 DOI: https://doi.org/10.1016/j.bdq.2014.11.003
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Morpeth, SC; Munywoki, P; Hammitt, LL; Bett, A; Bottomley, C; Onyango, CO; Murdoch, DR; Nokes, DJ; Scott, JAG; (2018) Impact of viral upper respiratory tract infection on the concentration of nasopharyngeal pneumococcal carriage among Kenyan children. Scientific reports, 8 (1). p. 11030. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-29119-w
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Moïsi, JC; Gatakaa, H; Berkley, JA; Maitland, K; Mturi, N; Newton, CR; Njuguna, P; Nokes, J; Ojal, J; Bauni, E; +5 more... Tsofa, B; Peshu, N; Marsh, K; Williams, TN; Scott, JA; (2011) Excess child mortality after discharge from hospital in Kilifi, Kenya: a retrospective cohort analysis. Bulletin of the World Health Organization, 89 (10). 725-32, 732A. ISSN 0042-9686 DOI: https://doi.org/10.2471/BLT.11.089235
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Moïsi, JC; Gatakaa, H; Noor, AM; Williams, TN; Bauni, E; Tsofa, B; Levine, OS; Scott, JA; (2010) Geographic access to care is not a determinant of child mortality in a rural Kenyan setting with high health facility density. BMC public health, 10. p. 142. ISSN 1471-2458 DOI: https://doi.org/10.1186/1471-2458-10-142
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Moïsi, JC; Nokes, DJ; Gatakaa, H; Williams, TN; Bauni, E; Levine, OS; Scott, JA; (2011) Sensitivity of hospital-based surveillance for severe disease: a geographic information system analysis of access to care in Kilifi district, Kenya. Bulletin of the World Health Organization, 89 (2). pp. 102-11. ISSN 0042-9686 DOI: https://doi.org/10.2471/BLT.10.080796
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Muema, DM; Nduati, EW; Uyoga, M; Bashraheil, M; Scott, JA; Hammitt, LL; Urban, BC; (2015) 10-valent pneumococcal non-typeable Haemophilus influenzae protein-D conjugate vaccine (PHiD-CV) induces memory B cell responses in healthy Kenyan toddlers. Clinical and experimental immunology, 181 (2). pp. 297-305. ISSN 0009-9104 DOI: https://doi.org/10.1111/cei.12637
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Munywoki, PK; Ohuma, EO; Ngama, M; Bauni, E; Scott, JA; Nokes, DJ; (2013) Severe lower respiratory tract infection in early infancy and pneumonia hospitalizations among children, Kenya. Emerging infectious diseases, 19 (2). pp. 223-9. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid1902.120940
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Murdoch, DR; Morpeth, SC; Hammitt, LL; Driscoll, AJ; Watson, NL; Baggett, HC; Brooks, WA; Deloria Knoll, M; Feikin, DR; Kotloff, KL; +99 more... Levine, OS; Madhi, SA; O’Brien, KL; Scott, JAG; Thea, DM; Adrian, PV; Ahmed, D; Alam, M; Awori, JO; Deluca, AN; Higdon, MM; Karron, RA; Kwenda, G; MacHuka, EM; Makprasert, S; McLellan, J; Moore, DP; Mwaba, J; Mwarumba, S; Park, DE; Prosperi, C; Sangwichian, O; Sissoko, S; Tapia, MD; Zeger, SL; Howie, SRC; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) The Diagnostic Utility of Induced Sputum Microscopy and Culture in Childhood Pneumonia. Clinical infectious diseases, 64 (suppl_). S280-S288. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix090
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Murdoch, DR; Morpeth, SC; Hammitt, LL; Driscoll, AJ; Watson, NL; Baggett, HC; Brooks, WA; Deloria Knoll, M; Feikin, DR; Kotloff, KL; +99 more... Levine, OS; Madhi, SA; O’Brien, KL; Scott, JAG; Thea, DM; Ahmed, D; Awori, JO; Deluca, AN; Ebruke, BE; Higdon, MM; Jorakate, P; Karron, RA; Kazungu, S; Kwenda, G; Hossain, L; Makprasert, S; Moore, DP; Mudau, A; Mwaba, J; Panchalingam, S; Park, DE; Prosperi, C; Salaudeen, R; Toure, A; Zeger, SL; Howie, SRC; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Kagucia, EW; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Brooks, WA; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Microscopic Analysis and Quality Assessment of Induced Sputum From Children With Pneumonia in the PERCH Study. Clinical infectious diseases, 64 (suppl_). S271-S279. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix083
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Muthumbi, E; Lowe, BS; Muyodi, C; Getambu, E; Gleeson, F; Scott, JAG; (2017) Risk factors for community-acquired pneumonia among adults in Kenya: a case-control study. Pneumonia (Nathan Qld), 9. p. 17. ISSN 2200-6133 DOI: https://doi.org/10.1186/s41479-017-0041-2
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Muthumbi, E; Morpeth, SC; Ooko, M; Mwanzu, A; Mwarumba, S; Mturi, N; Etyang, AO; Berkley, JA; Williams, TN; Kariuki, S; +1 more... Scott, JA; (2015) Invasive Salmonellosis in Kilifi, Kenya. Clinical infectious diseases, 61 Sup. S290-301. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ737
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Ngari, MM; Fegan, G; Mwangome, MK; Ngama, MJ; Mturi, N; Scott, JAG; Bauni, E; Nokes, DJ; Berkley, JA; (2017) Mortality after Inpatient Treatment for Severe Pneumonia in Children: a Cohort Study. Paediatric and perinatal epidemiology, 31 (3). pp. 233-242. ISSN 0269-5022 DOI: https://doi.org/10.1111/ppe.12348
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Ngugi, AK; Bottomley, C; Scott, JA; Mung'ala-Odera, V; Bauni, E; Sander, JW; Kleinschmidt, I; Newton, CR; (2013) Incidence of convulsive epilepsy in a rural area in Kenya. Epilepsia, 54 (8). pp. 1352-9. ISSN 0013-9580 DOI: https://doi.org/10.1111/epi.12236
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Niederer, HA; Willcocks, LC; Rayner, TF; Yang, W; Lau, YL; Williams, TN; Scott, JA; Urban, BC; Peshu, N; Dunstan, SJ; +10 more... Hien, TT; Phu, NH; Padyukov, L; Gunnarsson, I; Svenungsson, E; Savage, CO; Watts, RA; Lyons, PA; Clayton, DG; Smith, KG; (2010) Copy number, linkage disequilibrium and disease association in the FCGR locus. Human molecular genetics, 19 (16). pp. 3282-94. ISSN 0964-6906 DOI: https://doi.org/10.1093/hmg/ddq216
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Nokes, DJ; Abwao, J; Pamba, A; Peenze, I; Dewar, J; Maghenda, JK; Gatakaa, H; Bauni, E; Scott, JA; Maitland, K; +1 more... Williams, TN; (2008) Incidence and clinical characteristics of group A rotavirus infections among children admitted to hospital in Kilifi, Kenya. PLoS medicine, 5 (7). e153. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.0050153
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Nyiro, JU; Sande, C; Mutunga, M; Kiyuka, PK; Munywoki, PK; Scott, JA; Nokes, DJ; (2015) Quantifying maternally derived respiratory syncytial virus specific neutralising antibodies in a birth cohort from coastal Kenya. Vaccine, 33 (15). pp. 1797-801. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2015.02.039
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Nyiro, Joyce U; Kiyuka, Patience K; Mutunga, Martin N; Sande, Charles J; Munywoki, Patrick K; Scott, J Anthony G; Nokes, D James; (2019) Agreement between ELISA and plaque reduction neutralisation assay in Detection of respiratory syncytial virus specific antibodies in a birth Cohort from Kilifi, coastal Kenya. Wellcome open research, 4. 33-. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.15108.1
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Ojal, John; Griffiths, Ulla; Hammitt, Laura L; Adetifa, Ifedayo; Akech, Donald; Tabu, Collins; Scott, Anthony; Flasche, Stefan; (2019) Sustaining pneumococcal vaccination after transitioning from Gavi support: a modelling and cost-effectiveness study in Kenya. Lancet Global Health, 7 (5). e644-e654. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(18)30562-X
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Ojal, John; Griffiths, Ulla; Hammitt, Laura L; Adetifa, Ifedayo; Akech, Donald; Tabu, Collins; Scott, J Anthony G; Flasche, Stefan; (2019) Sustaining pneumococcal vaccination after transitioning from Gavi support: a modelling and cost-effectiveness study in Kenya. The Lancet Global Health, 7 (5). e644-e654. ISSN 2214-109X DOI: https://doi.org/10.1016/s2214-109x(18)30562-x
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Ong'ayo, Gerald; Ooko, Michael; Wang'odu, Ruth; Bottomley, Christian; Nyaguara, Christian; Tsofa, Benjamin; Williams, Thomas; Bejon, Philip; Scott, Anthony; Etyang, Anthony; (2019) Effect of strikes by health workers on mortality between 2010 and 2016 in Kilifi, Kenya: a population-based cohort analysis. The Lancet Global Health. e961-e967. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(19)30188-3
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Onyango, CO; Njeru, R; Kazungu, S; Achilla, R; Bulimo, W; Welch, SR; Cane, PA; Gunson, RN; Hammitt, LL; Scott, JA; +2 more... Berkley, JA; Nokes, DJ; (2012) Influenza surveillance among children with pneumonia admitted to a district hospital in coastal Kenya, 2007-2010. The Journal of infectious diseases, 206 Su. S61-7. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis536
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O’Brien, KL; Baggett, HC; Brooks, WA; Feikin, DR; Hammitt, LL; Howie, SRC; Deloria Knoll, M; Kotloff, KL; Levine, OS; Madhi, SA; +4 more... Murdoch, DR; Scott, JAG; Thea, DM; Zeger, SL; (2017) Introduction to the Epidemiologic Considerations, Analytic Methods, and Foundational Results From the Pneumonia Etiology Research for Child Health Study. Clinical infectious diseases, 64 (suppl_). S179-S184. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix142
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Park, DE; Baggett, HC; Howie, SRC; Shi, Q; Watson, NL; Brooks, WA; Deloria Knoll, M; Hammitt, LL; Kotloff, KL; Levine, OS; +100 more... Madhi, SA; Murdoch, DR; O’Brien, KL; Scott, JAG; Thea, DM; Ahmed, D; Antonio, M; Baillie, VL; Deluca, AN; Driscoll, AJ; Fu, W; Gitahi, CW; Olutunde, E; Higdon, MM; Hossain, L; Karron, RA; Maiga, AA; Maloney, SA; Moore, DP; Morpeth, SC; Mwaba, J; Mwenechanya, M; Prosperi, C; Sylla, M; Thamthitiwat, S; Zeger, SL; Feikin, DR; O’Brien, KL; Levine, OS; Knoll, MD; Feikin, DR; Deluca, AN; Driscoll, AJ; Fancourt, N; Fu, W; Hammitt, LL; Higdon, MM; Wangeci Kagucia, E; Karron, RA; LI, M; Park, DE; Prosperi, C; Wu, Z; Zeger, SL; Watson, NL; Crawley, J; Murdoch, DR; Abdullah Brooks, W; Endtz, HP; Zaman, K; Goswami, D; Hossain, L; Jahan, Y; Ashraf, H; Howie, SRC; Ebruke, BE; Antonio, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; Scott, JAG; Awori, JO; Morpeth, SC; Kamau, A; Kazungu, S; Ominde, MS; Kotloff, KL; Tapia, MD; Sow, SO; Sylla, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; Madhi, SA; Moore, DP; Adrian, PV; Baillie, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; Baggett, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; Sawatwong, P; Akarasewi, P; Thea, DM; Mwananyanda, L; Chipeta, J; Seidenberg, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Colonization Density of the Upper Respiratory Tract as a Predictor of Pneumonia—Haemophilus influenzae, Moraxella catarrhalis, Staphylococcus aureus, and Pneumocystis jirovecii. Clinical infectious diseases, 64 (suppl_). S328-S336. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix104
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Sadarangani, M; Seaton, C; Scott, JA; Ogutu, B; Edwards, T; Prins, A; Gatakaa, H; Idro, R; Berkley, JA; Peshu, N; +2 more... Neville, BG; Newton, CR; (2008) Incidence and outcome of convulsive status epilepticus in Kenyan children: a cohort study. Lancet neurology, 7 (2). pp. 145-50. ISSN 1474-4422 DOI: https://doi.org/10.1016/S1474-4422(07)70331-9
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Sankoh, O; INDEPTH Network and partners; , COLLABORATORS; Sankoh, O; Bangha, M; Emina, JB; Herbst, AJ; Tollman, S; Kant, S; Aaby, P; +152 more... Chowdhury, A; Delaunay, V; Diallo, A; Khan, WA; Streatfield, K; Alam, N; Bhuiya, A; Ha, BT; Molla, M; Kebede, Y; Alberts, M; Toan, TK; Chuc, NT; Gyapong, M; Jasseh, M; Tessema, F; Nathan, R; Salim, A; Masanja, H; Punpuing, S; Crampin, A; Nyrienda, M; Kouanda, S; Mangen, FW; Lutalo, T; Sewankambo, N; Williams, TN; Scott, JA; Assefa, N; Adama, Y; Gebru, AA; Owusu-Agyei, S; Odhiambo, F; Otieno, W; Sifuna, P; Macete, E; Urassa, M; Larson, P; Ezeh, A; Beguy, D; Kyobutungi, C; Tinto, H; Oche, OM; Oduro, A; Sie, A; Soura, A; Wilopo, S; Sirima, S; Bonfoh, B; Juvekar, S; Sonko, B; Nguyen, BP; Meremikwu, M; Asiki, G; Thompson, R; Clark, SJ; Binka, F; Sankoh, O; Sankoh, O; Herbst, AJ; Tollman, S; Kant, S; Aaby, P; Chowdhury, A; Delaunay, V; Diallo, A; Khan, WA; Streatfield, K; Alam, N; Bhuiya, A; Ha, BT; Molla, M; Kebede, Y; Alberts, M; Toan, TK; Chuc, NT; Gyapong, M; Jasseh, M; Tessema, F; Nathan, R; Salim, A; Masanja, H; Punpuing, S; Crampin, A; Nyrienda, M; Kouanda, S; Mangen, FW; Lutalo, T; Sewankambo, N; Williams, TN; Scott, JA; Assefa, N; Adama, Y; Gebru, AA; Owusu-Agyei, S; Odhiambo, F; Otieno, W; Sifuna, P; Macete, E; Urassa, M; Larson, P; Ezeh, A; Beguy, D; Kyobutungi, C; Tinto, H; Oche, OM; Oduro, A; Sie, A; Soura, A; Wilopo, S; Sirima, S; Bonfoh, B; Juvekar, S; Sonko, B; Nguyen, BP; Meremikwu, M; Asiki, G; Thompson, R; Evans, T; Byass, P; Adami, HO; Campbell, H; Ekstrom, AM; Mwenesi, H; Ross, D; Mbacké, C; Moyer, C; Asangansi, I; Bocquier, P; Clark, SJ; Gage, J; McPake, B; Clark, J; Sturkenboom, M; Weibel, D; Bonhoeffer, J; Dolinger, D; Boehme, C; Ye, Y; Binka, F; de Savigny, D; Long, KZ; Käser, M; Karim, A; Mäusezahl, D; Tanner, M; de Savigny, D; Long, KZ; Käser, M; Karim, A; Mäusezahl, D; Tanner, M; (2017) Why population-based data are crucial to achieving the Sustainable Development Goals. International journal of epidemiology. ISSN 0300-5771 DOI: https://doi.org/10.1093/ije/dyx010
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Sankoh, O; INDEPTH Network; , COLLABORATORS; Sankoh, O; Bangha, M; Emina, JB; Herbst, AJ; Tollman, S; Kant, S; Aaby, P; +152 more... Chowdhury, A; Delaunay, V; Diallo, A; Khan, WA; Streatfield, K; Alam, N; Bhuiya, A; Ha, BT; Molla, M; Kebede, Y; Alberts, M; Toan, TK; Chuc, NT; Gyapong, M; Jasseh, M; Tessema, F; Nathan, R; Salim, A; Masanja, H; Punpuing, S; Crampin, A; Nyrienda, M; Kouanda, S; Mangen, FW; Lutalo, T; Sewankambo, N; Williams, TN; Scott, JA; Assefa, N; Adama, Y; Gebru, AA; Owusu-Agyei, S; Odhiambo, F; Otieno, W; Sifuna, P; Macete, E; Urassa, M; Larson, P; Ezeh, A; Beguy, D; Kyobutungi, C; Tinto, H; Oche, OM; Oduro, A; Sie, A; Soura, A; Wilopo, S; Sirima, S; Bonfoh, B; Juvekar, S; Sonko, B; Nguyen, BP; Meremikwu, M; Asiki, G; Thompson, R; Clark, SJ; Binka, F; Sankoh, O; Sankoh, O; Herbst, AJ; Tollman, S; Kant, S; Aaby, P; Chowdhury, A; Delaunay, V; Diallo, A; Khan, WA; Streatfield, K; Alam, N; Bhuiya, A; Ha, BT; Molla, M; Kebede, Y; Alberts, M; Toan, TK; Chuc, NT; Gyapong, M; Jasseh, M; Tessema, F; Nathan, R; Salim, A; Masanja, H; Punpuing, S; Crampin, A; Nyrienda, M; Kouanda, S; Mangen, FW; Lutalo, T; Sewankambo, N; Williams, TN; Scott, JA; Assefa, N; Adama, Y; Gebru, AA; Owusu-Agyei, S; Odhiambo, F; Otieno, W; Sifuna, P; Macete, E; Urassa, M; Larson, P; Ezeh, A; Beguy, D; Kyobutungi, C; Tinto, H; Oche, OM; Oduro, A; Sie, A; Soura, A; Wilopo, S; Sirima, S; Bonfoh, B; Juvekar, S; Sonko, B; Nguyen, BP; Meremikwu, M; Asiki, G; Thompson, R; Evans, T; Byass, P; Adami, HO; Campbell, H; Ekstrom, AM; Mwenesi, H; Ross, D; Mbacké, C; Moyer, C; Asangansi, I; Bocquier, P; Clark, SJ; Gage, J; McPake, B; Clark, J; Sturkenboom, M; Weibel, D; Bonhoeffer, J; Dolinger, D; Boehme, C; Ye, Y; Binka, F; de Savigny, D; Long, KZ; Käser, M; Karim, A; Mäusezahl, D; Tanner, M; de Savigny, D; Long, KZ; Käser, M; Karim, A; Mäusezahl, D; Tanner, M; (2015) CHESS: an innovative concept for a new generation of population surveillance. The Lancet Global health, 3 (12). e742. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(15)00180-1
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Satzke, C; Turner, P; Virolainen-Julkunen, A; Adrian, PV; Antonio, M; Hare, KM; Henao-Restrepo, AM; Leach, AJ; Klugman, KP; Porter, BD; +5 more... Sá-Leão, R; Scott, JA; Nohynek, H; O'Brien, KL; WHO Pneumococcal Carriage Working Group; (2013) Standard method for detecting upper respiratory carriage of Streptococcus pneumoniae: updated recommendations from the World Health Organization Pneumococcal Carriage Working Group. Vaccine, 32 (1). pp. 165-79. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2013.08.062
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Scott, JA; (2008) The global epidemiology of childhood pneumonia 20 years on. Bulletin of the World Health Organization, 86 (6). pp. 494-6. ISSN 0042-9686 DOI: https://doi.org/10.2471/BLT.08.052753
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Scott, JA; Bauni, E; Moisi, JC; Ojal, J; Gatakaa, H; Nyundo, C; Molyneux, CS; Kombe, F; Tsofa, B; Marsh, K; +2 more... Peshu, N; Williams, TN; (2012) Profile: The Kilifi Health and Demographic Surveillance System (KHDSS). International journal of epidemiology, 41 (3). pp. 650-7. ISSN 0300-5771 DOI: https://doi.org/10.1093/ije/dys062
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Scott, JA; Berkley, JA; Mwangi, I; Ochola, L; Uyoga, S; Macharia, A; Ndila, C; Lowe, BS; Mwarumba, S; Bauni, E; +2 more... Marsh, K; Williams, TN; (2011) Relation between falciparum malaria and bacteraemia in Kenyan children: a population-based, case-control study and a longitudinal study. Lancet, 378 (9799). pp. 1316-23. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(11)60888-X
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Scott, JA; Brooks, WA; Peiris, JS; Holtzman, D; Mulholland, EK; (2008) Pneumonia research to reduce childhood mortality in the developing world. The Journal of clinical investigation, 118 (4). pp. 1291-1300. ISSN 0021-9738 DOI: https://doi.org/10.1172/JCI33947
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Scott, JA; Wonodi, C; Moïsi, JC; Deloria-Knoll, M; DeLuca, AN; Karron, RA; Bhat, N; Murdoch, DR; Crawley, J; Levine, OS; +3 more... O'Brien, KL; Feikin, DR; Pneumonia Methods Working Group; (2012) The definition of pneumonia, the assessment of severity, and clinical standardization in the Pneumonia Etiology Research for Child Health study. Clinical infectious diseases, 54 Sup. S109-16. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1065
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Seale, AC; Davies, MR; Anampiu, K; Morpeth, SC; Nyongesa, S; Mwarumba, S; Smeesters, PR; Efstratiou, A; Karugutu, R; Mturi, N; +5 more... Williams, TN; Scott, JAG; Kariuki, S; Dougan, G; Berkley, JA; (2016) Invasive Group A Streptococcus Infection among Children, Rural Kenya. Emerging infectious diseases, 22 (2). pp. 224-232. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2202.151358
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Shi, T; McAllister, DA; O'Brien, KL; Simoes, EAF; Madhi, SA; Gessner, BD; Polack, FP; Balsells, E; Acacio, S; Aguayo, C; +113 more... Alassani, I; Ali, A; Antonio, M; Awasthi, S; Awori, JO; Azziz-Baumgartner, E; Baggett, HC; Baillie, VL; Balmaseda, A; Barahona, A; Basnet, S; Bassat, Q; Basualdo, W; Bigogo, G; Bont, L; Breiman, RF; Brooks, WA; Broor, S; Bruce, N; Bruden, D; Buchy, P; Campbell, S; Carosone-Link, P; Chadha, M; Chipeta, J; Chou, M; Clara, W; Cohen, C; de Cuellar, E; Dang, DA; Dash-Yandag, B; Deloria-Knoll, M; Dherani, M; Eap, T; Ebruke, BE; Echavarria, M; de Freitas Lázaro Emediato, CC; Fasce, RA; Feikin, DR; Feng, L; Gentile, A; Gordon, A; Goswami, D; Goyet, S; Groome, M; Halasa, N; Hirve, S; Homaira, N; Howie, SRC; Jara, J; Jroundi, I; Kartasasmita, CB; Khuri-Bulos, N; Kotloff, KL; Krishnan, A; Libster, R; Lopez, O; Lucero, MG; Lucion, F; Lupisan, SP; Marcone, DN; McCracken, JP; Mejia, M; Moisi, JC; Montgomery, JM; Moore, DP; Moraleda, C; Moyes, J; Munywoki, P; Mutyara, K; Nicol, MP; Nokes, DJ; Nymadawa, P; da Costa Oliveira, MT; Oshitani, H; Pandey, N; Paranhos-Baccalà, G; Phillips, LN; Picot, VS; Rahman, M; Rakoto-Andrianarivelo, M; Rasmussen, ZA; Rath, BA; Robinson, A; Romero, C; Russomando, G; Salimi, V; Sawatwong, P; Scheltema, N; Schweiger, B; Scott, JAG; Seidenberg, P; Shen, K; Singleton, R; Sotomayor, V; Strand, TA; Sutanto, A; Sylla, M; Tapia, MD; Thamthitiwat, S; Thomas, ED; Tokarz, R; Turner, C; Venter, M; Waicharoen, S; Wang, J; Watthanaworawit, W; Yoshida, LM; Yu, H; Zar, HJ; Campbell, H; Nair, H; RSV Global Epidemiology Network; (2017) Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study. Lancet. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(17)30938-8
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Thea, DM; Seidenberg, P; Park, DE; Mwananyanda, L; Fu, W; Shi, Q; Baggett, HC; Brooks, WA; Feikin, DR; Howie, SRC; +101 more... Knoll, MD; Kotloff, KL; Levine, OS; Madhi, SA; O’Brien, KL; Scott, JAG; Antonio, M; Awori, JO; Baillie, VL; Deluca, AN; Driscoll, AJ; Higdon, MM; Hossain, L; Jahan, Y; Karron, RA; Kazungu, S; LI, M; Moore, DP; Morpeth, SC; Ofordile, O; Prosperi, C; Sangwichian, O; Sawatwong, P; Sylla, M; Tapia, MD; Zeger, SL; Murdoch, DR; Hammitt, LL; O, KL; L, OS; K, MD; F, DR; D, AN; D, AJ; Fancourt, N; F, W; H, LL; H, MM; Wangeci Kagucia, E; K, RA; L, M; P, DE; P, C; Wu, Z; Z, SL; Watson, NL; Crawley, J; M, DR; W. A, B; Endtz, HP; Khalequ, Z; Goswami, D; H, L; J, Y; Ashraf, H; H, SRC; Ebruke, BE; A, M; McLellan, J; MacHuka, E; Shamsul, A; Zaman, SMA; MacKenzie, G; S, JAG; A, JO; M, SC; Kamau, A; K, S; Ominde, MS; K, KL; T, MD; Sow, SO; S, M; Tamboura, B; Onwuchekwa, U; Kourouma, N; Toure, A; M, SA; M, DP; Adrian, PV; B, VL; Kuwanda, L; Mudau, A; Groome, MJ; Mahomed, N; B, HC; Thamthitiwat, S; Maloney, SA; Bunthi, C; Rhodes, J; S, P; Akarasewi, P; T, DM; M, L; Chipeta, J; S, P; Mwansa, J; Wa Somwe, S; Kwenda, G; Anderson, TP; Mitchell, J; (2017) Limited Utility of Polymerase Chain Reaction in Induced Sputum Specimens for Determining the Causes of Childhood Pneumonia in Resource-Poor Settings: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study. Clinical infectious diseases, 64 (suppl_). S289-S300. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix098
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Tigoi, CC; Gatakaa, H; Karani, A; Mugo, D; Kungu, S; Wanjiru, E; Jomo, J; Musyimi, R; Ojal, J; Glass, NE; +2 more... Abdullahi, O; Scott, JA; (2012) Rates of acquisition of pneumococcal colonization and transmission probabilities, by serotype, among newborn infants in Kilifi District, Kenya. Clinical infectious diseases, 55 (2). pp. 180-8. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cis371
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Turner, GD; Bunthi, C; Wonodi, CB; Morpeth, SC; Molyneux, CS; Zaki, SR; Levine, OS; Murdoch, DR; Scott, JA; (2012) The role of postmortem studies in pneumonia etiology research. Clinical infectious diseases, 54 Sup. S165-71. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cir1062
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Ugoga, Sophie; Macharia, Alex W; Ndila, Carolyne; Nyutu, Gideon; Shebe, Mohammed; Awuondo, Kennedy O; Mturi, Neema; Peshu, Norbert; Tsofa, Benjamin; Scott, J Anthony G; +2 more... Maitland, Kathryn; Williams, Thomas N; (2019) The indirect health effects of malaria estimated from health advantages of the sickle cell trait. Nature Communications, 10. p. 856. DOI: https://doi.org/10.1038/s41467-019-08775-0
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Verani, JR; Baqui, AH; Broome, CV; Cherian, T; Cohen, C; Farrar, JL; Feikin, DR; Groome, MJ; Hajjeh, RA; Johnson, HL; +15 more... Madhi, SA; Mulholland, K; O'Brien, KL; Parashar, UD; Patel, MM; Rodrigues, LC; Santosham, M; Scott, JA; Smith, PG; Sommerfelt, H; Tate, JE; Victor, JC; Whitney, CG; Zaidi, AK; Zell, ER; (2017) Case-control vaccine effectiveness studies: Preparation, design, and enrollment of cases and controls. Vaccine. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2017.04.037
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Verani, JR; Baqui, AH; Broome, CV; Cherian, T; Cohen, C; Farrar, JL; Feikin, DR; Groome, MJ; Hajjeh, RA; Johnson, HL; +15 more... Madhi, SA; Mulholland, K; O'Brien, KL; Parashar, UD; Patel, MM; Rodrigues, LC; Santosham, M; Scott, JA; Smith, PG; Sommerfelt, H; Tate, JE; Victor, JC; Whitney, CG; Zaidi, AK; Zell, ER; (2017) Case-control vaccine effectiveness studies: Data collection, analysis and reporting results. Vaccine. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2017.04.035
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Wang, L; Ko, ER; Gilchrist, JJ; Pittman, KJ; Rautanen, A; Pirinen, M; Thompson, JW; Dubois, LG; Langley, RJ; Jaslow, SL; +15 more... Salinas, RE; Rouse, DC; Moseley, MA; Mwarumba, S; Njuguna, P; Mturi, N; Wellcome Trust Case Control Consortium 2; Kenyan Bacteraemia Study Group; Williams, TN; Scott, JA; Hill, AV; Woods, CW; Ginsburg, GS; Tsalik, EL; Ko, DC; (2017) Human genetic and metabolite variation reveals that methylthioadenosine is a prognostic biomarker and an inflammatory regulator in sepsis. Science advances, 3 (3). e1602096. ISSN 2375-2548 DOI: https://doi.org/10.1126/sciadv.1602096
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Weinberger, DM; Harboe, ZB; Flasche, S; Scott, JA; Lipsitch, M; (2011) Prediction of serotypes causing invasive pneumococcal disease in unvaccinated and vaccinated populations. Epidemiology (Cambridge, Mass), 22 (2). pp. 199-207. ISSN 1044-3983 DOI: https://doi.org/10.1097/EDE.0b013e3182087634
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Williams, TN; Uyoga, S; Macharia, A; Ndila, C; McAuley, CF; Opi, DH; Mwarumba, S; Makani, J; Komba, A; Ndiritu, MN; +4 more... Sharif, SK; Marsh, K; Berkley, JA; Scott, JA; (2009) Bacteraemia in Kenyan children with sickle-cell anaemia: a retrospective cohort and case-control study. Lancet, 374 (9698). pp. 1364-70. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(09)61374-X
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Zhou, K; Fitzpatrick, T; Walsh, N; Kim, JY; Chou, R; Lackey, M; Scott, J; Lo, YR; Tucker, JD; (2016) Interventions to optimise the care continuum for chronic viral hepatitis: a systematic review and meta-analyses. The Lancet infectious diseases. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(16)30208-0
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Restricted

Kagia, Ngure; Kosgei, Patrick; Ooko, Michael; Wafula, L; Mturi, Neema; Anampiu, Kirimi; Mwarumba, Salim; Njuguna, Patricia; Seale, Anna C; Berkley, James A; +3 more... Bottomley, Christian; Scott, John Anthony; Morpeth, Susan C; (2019) Carriage and acquisition of Extended Spectrum Beta-Lactamase producing Enterobacterales amongst neonates admitted to hospital in Kilifi, Kenya. Clinical Infectious Diseases. ISSN 1058-4838 http://researchonline.lshtm.ac.uk/id/eprint/4650895 Item availability may be restricted.
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O'Brien, Katherine; Levine, Orin S; Scott, Anthony; Deloria Knoll, Maria; Feikin, Daniel R; DeLuca, Andrea N; Driscoll, Amanda J; Fancourt, Nicholas; Fu, Wei; Haddix, Meredith; +68 more... Hammitt, Laura L; Higdon, Melissa M; Kagucia, E Wangeci; Karron, Ruth A; Li, Mengying; Park, Daniel E; Prosperi, Christine; Shi, Qiyuan; Wu, Zhenke; Zeger, Scott L; Watson, Nora L; Crawley, Jane; Murdoch, David R; Brooks, W Abdullah; Endtz, Hubert P; Zaman, Khalequ; Goswami, Doli; Hoassain, Lokman; Jahan, Yasmin; Jobayer Chisti, Mohammod; Howie, Stephen RC; Ebruke, Bernard E; Antonio, Martin; McLellan, Jessica L; Machuka, Eunice M; Shamsul, Arifin; Zaman, Syed MA; Mackenzie, Grant; Scott, Anthony G; Awori, Juliet O; Morpeth, Susan C; Kamau, Alice; Kazunga, Sidi; Ominde, Micah Silaba; Kotloff, Karen L; Tapia, Milagritos D; Sow, Samba O; Sylla, Mamadou; Tamboura, Boubou; Onwuchekwa, Uma; Kourouma, Nana; Toure, Aliou; Sissoko, Seydou; Madhi, Shabir A; Moore, David P; Adrian, Peter V; Baillie, Vicky L; Kuwanda, Locadiah; Mudau, Azwifarwi; Groome, Michelle J; Mahomed, Nasreen; Simoes, Eric AF; Baggett, Henry C; Thamthitiwat, Somsak; Maloney, Susan A; Bunthi, Charatdao; Rhodes, Julia; Sawatwong, Pongpun; Akarasewi, Pasakorn; Thea, Donald M; Mwananyanda, Lawrence; Chipeta, James; Seidenberg, Phil; Mwansa, James; Somwe, Somwe Wa; Kwenda, Geoffrey; Anderson, Trevor P; Mitchell, Joanne L; (2019) Aetiology of severe hospitalised pneumonia in HIV-uninfected children from Africa and Asia: the Pneumonia Aetiology Research for Child Health (PERCH) Case-Control Study. Lancet. ISSN 0140-6736 http://researchonline.lshtm.ac.uk/id/eprint/4652229 (In Press) Item availability may be restricted.
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This list was generated on Wed Jun 26 08:58:31 2019 BST.