Items where Research Centre is "Centre for the Mathematical Modelling of Infectious Diseases"
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Jump to: 2020
Number of items: 194.
2020
Abbas, Kaja M;
van Zandvoort, Kevin;
Brisson, Marc;
Jit, Mark;
(2020)
Effects of updated demography, disability weights, and cervical cancer burden on estimates of human papillomavirus vaccination impact at the global, regional, and national levels: a PRIME modelling study.
The Lancet Global Health, 8 (4).
e536-e544.
ISSN 2214-109X
DOI: https://doi.org/10.1016/S2214-109X(20)30022-X
Abbas, Kaja;
Procter, Simon R;
van Zandvoort, Kevin;
Clark, Andrew;
Funk, Sebastian;
Mengistu, Tewodaj;
Hogan, Dan;
Dansereau, Emily;
Jit, Mark;
Flasche, Stefan;
+1 more...
LSHTM CMMID COVID-19 Working Group;
(2020)
Routine childhood immunisation during the COVID-19 pandemic in Africa: a benefit-risk analysis of health benefits versus excess risk of SARS-CoV-2 infection.
The Lancet Global Health, 8 (10).
e1264-e1272.
DOI: https://doi.org/10.1016/S2214-109X(20)30308-9
Abbott, Sam;
Hellewell, Joel;
Munday, James;
CMMID nCoV working group;
Funk, Sebastian;
(2020)
The transmissibility of novel Coronavirus in the early stages of the 2019-20 outbreak in Wuhan: Exploring initial point-source exposure sizes and durations using scenario analysis.
Wellcome open research, 5.
17-.
ISSN 2398-502X
DOI: https://doi.org/10.12688/wellcomeopenres.15718.1
Abbott, Sam;
Hellewell, Joel;
Thompson, Robin N;
Sherratt, Katharine;
Gibbs, Hamish P;
Bosse, Nikos I;
Munday, James D;
Meakin, Sophie;
Doughty, Emma L;
Chun, June Young;
+11 more...
Chan, Yung-Wai Desmond;
Finger, Flavio;
Campbell, Paul;
Endo, Akira;
Pearson, Carl AB;
Gimma, Amy;
Russell, Tim;
Flasche, Stefan;
Kucharski, Adam J;
Eggo, Rosalind M;
Funk, Sebastian;
(2020)
Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts.
Wellcome Open Research, 5.
p. 112.
DOI: https://doi.org/10.12688/wellcomeopenres.16006.2
Ades, AE;
Brickley, Elizabeth B;
Alexander, Neal;
Brown, David;
Jaenisch, Thomas;
Miranda-Filho, Demócrito de Barros;
Pohl, Moritz;
Rosenberger, Kerstin D;
Soriano-Arandes, Antoni;
Thorne, Claire;
+27 more...
Ximenes, Ricardo Arraes de Alencar;
de Araújo, Thalia Velho Barreto;
Avelino-Silva, Vivian I;
Bethencourt Castillo, Sarah Esperanza;
Borja Aburto, Victor Hugo;
Brasil, Patrícia;
Christie, Celia DC;
de Souza, Wayner Vieira;
Gotuzzo H, Jose Eduardo;
Hoen, Bruno;
Koopmans, Marion;
Martelli, Celina Maria Turchi;
Martins Teixeira, Mauro;
Marques, Ernesto TA;
Miranda, Maria Consuelo;
Montarroyos, Ulisses Ramos;
Moreira, Maria Elisabeth;
Morris, J Glenn;
Rockx, Barry;
Saba Villarroel, Paola Mariela;
Soria Segarra, Carmen;
Tami, Adriana;
Turchi, Marília Dalva;
Giaquinto, Carlo;
de Lamballerie, Xavier;
Wilder-Smith, Annelies;
EC Zika Consortia Vertical Transmission Study Group;
(2020)
Zika virus infection in pregnancy: a protocol for the joint analysis of the prospective cohort studies of the ZIKAlliance, ZikaPLAN and ZIKAction consortia.
BMJ OPEN, 10 (12).
e035307-.
ISSN 2044-6055
DOI: https://doi.org/10.1136/bmjopen-2019-035307
Alexander, Neal;
Lenhart, Audrey;
Anaya-Izquierdo, Karim;
(2020)
Spatial spillover analysis of a cluster-randomized trial against dengue vectors in Trujillo, Venezuela.
PLOS NEGLECTED TROPICAL DISEASES, 14 (9).
e0008576-.
ISSN 1935-2735
DOI: https://doi.org/10.1371/journal.pntd.0008576
Anaya-Izquierdo, Karim;
Alexander, Neal;
(2020)
Spatial regression and spillover effects in cluster randomized trials with count outcomes.
BIOMETRICS, 77 (2).
pp. 490-505.
ISSN 0006-341X
DOI: https://doi.org/10.1111/biom.13316
Ansbro, Éimhín;
Garry, Sylvia;
Karir, Veena;
Reddy, Amulya;
Jobanputra, Kiran;
Fardous, Taissir;
Sadique, Zia;
(2020)
Delivering a primary-level non-communicable disease programme for Syrian refugees and the host population in Jordan: a descriptive costing study.
HEALTH POLICY AND PLANNING, 35 (8).
pp. 931-940.
ISSN 0268-1080
DOI: https://doi.org/10.1093/heapol/czaa050
Anyasi, Helen I;
Foss, Anna M;
(2020)
A comparative analysis of cervical cancer prevention between Nigeria and Nordic countries that have experienced a decline in cervical cancer incidence.
International health, 13 (4).
pp. 307-317.
ISSN 1876-3413
DOI: https://doi.org/10.1093/inthealth/ihaa062
Arora, Nikita;
Hanson, Kara;
Spicer, Neil;
Estifanos, Abiy Seifu;
Keraga, Dorka Woldesenbet;
Welearegay, Alemtsehay Tewele;
Tela, Freweini Gebrearegay;
Hussen, Yemisrach Ahmed;
Mandefro, Yordanos Semu;
Quaife, Matthew;
(2020)
Understanding the importance of non-material factors in retaining community health workers in low-income settings: a qualitative case-study in Ethiopia.
BMJ OPEN, 10 (10).
e037989-.
ISSN 2044-6055
DOI: https://doi.org/10.1136/bmjopen-2020-037989
Ashmore, Polly;
Lindahl, Johanna F;
Colón-González, Felipe J;
Sinh Nam, Vu;
Quang Tan, Dang;
Medley, Graham F;
(2020)
Spatiotemporal and Socioeconomic Risk Factors for Dengue at the Province Level in Vietnam, 2013-2015: Clustering Analysis and Regression Model.
Tropical medicine and infectious disease, 5 (2).
p. 81.
ISSN 2414-6366
DOI: https://doi.org/10.3390/tropicalmed5020081
Aubry, Maite;
Kama, Mike;
Henderson, Alasdair D;
Teissier, Anita;
Vanhomwegen, Jessica;
Mariteragi-Helle, Teheipuaura;
Paoaafaite, Tuterarii;
Manuguerra, Jean-Claude;
Christi, Ketan;
Watson, Conall H;
+3 more...
Lau, Colleen L;
Kucharski, Adam J;
Cao-Lormeau, Van-Mai;
(2020)
Low chikungunya virus seroprevalence two years after emergence in Fiji.
International Journal of Infectious Diseases, 90.
pp. 223-225.
ISSN 1201-9712
DOI: https://doi.org/10.1016/j.ijid.2019.10.040
Bacigalupo, Sonny A;
Dixon, Linda K;
Gubbins, Simon;
Kucharski, Adam J;
Drewe, Julian A;
(2020)
Towards a unified generic framework to define and observe contacts between livestock and wildlife: a systematic review.
PeerJ, 8.
e10221-e10221.
DOI: https://doi.org/10.7717/peerj.10221
Baguelin, Marc;
Medley, Graham F;
Nightingale, Emily S;
O'Reilly, Kathleen M;
Rees, Eleanor M;
Waterlow, Naomi R;
Wagner, Moritz;
(2020)
Tooling-up for infectious disease transmission modelling.
Epidemics, 32.
100395-.
ISSN 1755-4365
DOI: https://doi.org/10.1016/j.epidem.2020.100395
Baral, Ranju;
Li, Xiao;
Willem, Lander;
Antillon, Marina;
Vilajeliu, Alba;
Jit, Mark;
Beutels, Philippe;
Pecenka, Clint;
(2020)
The impact of maternal RSV vaccine to protect infants in Gavi-supported countries: Estimates from two models.
VACCINE, 38 (33).
pp. 5139-5147.
ISSN 0264-410X
DOI: https://doi.org/10.1016/j.vaccine.2020.06.036
Baral, Ranju;
Nonvignon, Justice;
Debellut, Frédéric;
Agyemang, Samuel Agyei;
Clark, Andrew;
Pecenka, Clint;
(2020)
Cost of illness for childhood diarrhea in low- and middle-income countries: a systematic review of evidence and modelled estimates.
BMC public health, 20 (1).
619-.
ISSN 1471-2458
DOI: https://doi.org/10.1186/s12889-020-08595-8
Barry, Aissata;
Bradley, John;
Stone, Will;
Guelbeogo, Moussa W;
Lanke, Kjerstin;
Ouedraogo, Alphonse;
Soulama, Issiaka;
Nébié, Issa;
Serme, Samuel S;
Grignard, Lynn;
+14 more...
Patterson, Catriona;
Wu, Lindsey;
Briggs, Jessica J;
Janson, Owen;
Awandu, Shehu S;
Ouedraogo, Mireille;
Tarama, Casimire W;
Kargougou, Désiré;
Zongo, Soumanaba;
Sirima, Sodiomon B;
Marti, Matthias;
Drakeley, Chris;
Tiono, Alfred B;
Bousema, Teun;
(2020)
Higher gametocyte production and mosquito infectivity in chronic compared to incident Plasmodium falciparum infections.
Nature communications, 12 (1).
2443-.
ISSN 2041-1723
DOI: https://doi.org/10.1038/s41467-021-22573-7
Bell, Sadie;
Clarke, Richard;
Mounier-Jack, Sandra;
Walker, Jemma L;
Paterson, Pauline;
(2020)
Parents' and guardians' views on the acceptability of a future COVID-19 vaccine: A multi-methods study in England.
Vaccine, 38 (49).
pp. 7789-7798.
ISSN 0264-410X
DOI: https://doi.org/10.1016/j.vaccine.2020.10.027
Biggs, Joseph R;
Sy, Ava Kristy;
Brady, Oliver J;
Kucharski, Adam J;
Funk, Sebastian;
Reyes, Mary Anne Joy;
Quinones, Mary Ann;
Jones-Warner, William;
Tu, Yun-Hung;
Avelino, Ferchito L;
+15 more...
Sucaldito, Nemia L;
Mai, Huynh Kim;
Lien, Le Thuy;
Do Thai, Hung;
Nguyen, Hien Anh Thi;
Anh, Dang Duc;
Iwasaki, Chihiro;
Kitamura, Noriko;
Yoshida, Lay-Myint;
Tandoc, Amado O;
la Paz, Eva Cutiongco-de;
Capeding, Maria Rosario Z;
Padilla, Carmencita D;
Hafalla, Julius Clemence R;
Hibberd, Martin L;
(2020)
A serological framework to investigate acute primary and post-primary dengue cases reporting across the Philippines.
BMC medicine, 18 (1).
364-.
ISSN 1741-7015
DOI: https://doi.org/10.1186/s12916-020-01833-1
Bozzani, Fiammetta M;
Sumner, Tom;
Mudzengi, Don;
Gomez, Gabriela B;
White, Richard;
Vassall, Anna;
(2020)
Informing Balanced Investment in Services and Health Systems: A Case Study of Priority Setting for Tuberculosis Interventions in South Africa.
Value in Health, 23 (11).
pp. 1462-1469.
ISSN 1098-3015
DOI: https://doi.org/10.1016/j.jval.2020.05.021
Brady, Oliver J;
Kharisma, Dinar D;
Wilastonegoro, Nandyan N;
O'Reilly, Kathleen M;
Hendrickx, Emilie;
Bastos, Leonardo S;
Yakob, Laith;
Shepard, Donald S;
(2020)
The cost-effectiveness of controlling dengue in Indonesia using wMel Wolbachia released at scale: a modelling study.
BMC medicine, 18 (1).
186-.
ISSN 1741-7015
DOI: https://doi.org/10.1186/s12916-020-01638-2
Brooks-Pollock, Ellen;
Read, Jonathan M;
House, Thomas;
Medley, Graham F;
Keeling, Matt J;
Danon, Leon;
(2020)
The Population Attributable Fraction (PAF) of cases due to gatherings and groups with relevance to COVID-19 mitigation strategies.
medRxiv.
2020.03.20.20039537-.
DOI: https://doi.org/10.1101/2020.03.20.20039537
Cairns, Matthew E;
Sagara, Issaka;
Zongo, Issaka;
Kuepfer, Irene;
Thera, Ismaila;
Nikiema, Frederic;
Diarra, Modibo;
Yerbanga, Serge R;
Barry, Amadou;
Tapily, Amadou;
+8 more...
Coumare, Samba;
Milligan, Paul;
Tinto, Halidou;
Ouédraogo, Jean Bosco;
Chandramohan, Daniel;
Greenwood, Brian;
Djimde, Abdoulaye;
Dicko, Alassane;
(2020)
Evaluation of seasonal malaria chemoprevention in two areas of intense seasonal malaria transmission: Secondary analysis of a household-randomised, placebo-controlled trial in Houndé District, Burkina Faso and Bougouni District, Mali.
PLoS medicine, 17 (8).
e1003214-.
ISSN 1549-1277
DOI: https://doi.org/10.1371/journal.pmed.1003214
Campos, Monica;
Ward, Daniel;
Morales, Raika Francesca;
Gomes, Ana Rita;
Silva, Keily;
Sepúlveda, Nuno;
Gomez, Lara Ferrero;
Clark, Taane G;
Campino, Susana;
(2020)
Surveillance of Aedes aegypti populations in the city of Praia, Cape Verde: Zika virus infection, insecticide resistance and genetic diversity.
PARASITES & VECTORS, 13 (1).
481-.
ISSN 1756-3305
DOI: https://doi.org/10.1186/s13071-020-04356-z
Carter, DJ;
Pedrazzoli, D;
(2020)
Mitigating costs for people living with TB: from measurement to action.
Public health action, 10 (3).
84-.
ISSN 2220-8372
DOI: https://doi.org/10.5588/pha.20.0044
Chalabi, Zaid;
Foss, Anna M;
(2020)
Catastrophic Health Impacts of Spiraling Climate Change: How Certain Can We Be About Their Magnitudes?
FRONTIERS IN PUBLIC HEALTH, 8.
584721-.
ISSN 2296-2565
DOI: https://doi.org/10.3389/fpubh.2020.584721
Chan, Yung-Wai Desmond;
Flasche, Stefan;
Lam, Tin-Long Terence;
Leung, Mei-Hung Joanna;
Wong, Miu-Ling;
Lam, Ho-Yeung;
Chuang, Shuk-Kwan;
(2020)
Transmission dynamics, serial interval and epidemiology of COVID-19 diseases in Hong Kong under different control measures.
Wellcome Open Research, 5.
p. 91.
DOI: https://doi.org/10.12688/wellcomeopenres.15896.1
Chandramohan, Daniel;
Dicko, Alassane;
Zongo, Issaka;
Sagara, Issaka;
Cairns, Matthew;
Kuepfer, Irene;
Diarra, Modibo;
Tapily, Amadou;
Issiaka, Djibrilla;
Sanogo, Koualy;
+9 more...
Mahamar, Almahamoudou;
Sompougdou, Frederic;
Yerbanga, Serge;
Thera, Ismaila;
Milligan, Paul;
Tinto, Halidou;
Ofori-Anyinam, Opokua;
Ouedraogo, Jean-Bosco;
Greenwood, B;
(2020)
Seasonal malaria vaccination: protocol of a phase 3 trial of seasonal vaccination with the RTS,S/AS01E vaccine, seasonal malaria chemoprevention and the combination of vaccination and chemoprevention.
BMJ Open, 10 (9).
e035433-.
DOI: https://doi.org/10.1136/bmjopen-2019-035433
Chapman, Lloyd AC;
Spencer, Simon EF;
Pollington, Timothy M;
Jewell, Chris P;
Mondal, Dinesh;
Alvar, Jorge;
Hollingsworth, T Déirdre;
Cameron, Mary M;
Bern, Caryn;
Medley, Graham F;
(2020)
Inferring transmission trees to guide targeting of interventions against visceral leishmaniasis and post-kala-azar dermal leishmaniasis.
Proceedings of the National Academy of Sciences (PNAS), 117 (41).
pp. 25742-25750.
ISSN 0027-8424
DOI: https://doi.org/10.1073/pnas.2002731117
Clark, Andrew;
Jit, Mark;
Warren-Gash, Charlotte;
Guthrie, Bruce;
Wang, Harry HX;
Mercer, Stewart W;
Sanderson, Colin;
McKee, Martin;
Troeger, Christopher;
Ong, Kanyin I;
+6 more...
Checchi, Francesco;
Perel, Pablo;
Joseph, Sarah;
Gibbs, Hamish P;
Banerjee, Amitava;
Eggo, Rosalind M;
(2020)
How many are at increased risk of severe COVID-19 disease? Rapid global, regional and national estimates for 2020.
medRxiv.
2020.04.18.20064774-.
DOI: https://doi.org/10.1101/2020.04.18.20064774
Clark, Andrew;
Jit, Mark;
Warren-Gash, Charlotte;
Guthrie, Bruce;
Wang, Harry HX;
Mercer, Stewart W;
Sanderson, Colin;
McKee, Martin;
Troeger, Christopher;
Ong, Kanyin L;
+7 more...
Checchi, Francesco;
Perel, Pablo;
Joseph, Sarah;
Gibbs, Hamish P;
Banerjee, Amitava;
Eggo, Rosalind M;
Centre for the Mathematical Modelling of Infectious Diseases COV;
(2020)
Global, regional, and national estimates of the population at increased risk of severe COVID-19 due to underlying health conditions in 2020: a modelling study.
The Lancet. Global Health, 8 (8).
e1003-e1017.
ISSN 2214-109X
DOI: https://doi.org/10.1016/S2214-109X(20)30264-3
Clifford, Samuel;
Pearson, Carl AB;
Klepac, Petra;
Van Zandvoort, Kevin;
Quilty, Billy J;
CMMID COVID-19 working group;
Eggo, Rosalind M;
Flasche, Stefan;
(2020)
Effectiveness of interventions targeting air travellers for delaying local outbreaks of SARS-CoV-2.
JOURNAL OF TRAVEL MEDICINE, 27 (5).
taaa068-.
ISSN 1195-1982
DOI: https://doi.org/10.1093/jtm/taaa068
Coletti, Pietro;
Wambua, James;
Gimma, Amy;
Willem, Lander;
Vercruysse, Sarah;
Vanhoutte, Bieke;
Jarvis, Christopher I;
Van Zandvoort, Kevin;
Edmunds, John;
Beutels, Philippe;
+1 more...
Hens, Niel;
(2020)
CoMix: comparing mixing patterns in the Belgian population during and after lockdown.
SCIENTIFIC REPORTS, 10 (1).
21885-.
ISSN 2045-2322
DOI: https://doi.org/10.1038/s41598-020-78540-7
Cornelsen, Laura;
Quaife, Matthew;
Lagarde, Mylene;
Smith, Richard D;
(2020)
Framing and signalling effects of taxes on sugary drinks: A discrete choice experiment among households in Great Britain.
Health Economics, 29 (10).
pp. 1132-1147.
ISSN 1057-9230
DOI: https://doi.org/10.1002/hec.4123
D'Mello-Guyett, Lauren;
Greenland, Katie;
Bonneville, Sharla;
D'hondt, Rob;
Mashako, Maria;
Gorski, Alexandre;
Verheyen, Dorien;
Van den Bergh, Rafael;
Maes, Peter;
Checchi, Francesco;
+1 more...
Cumming, Oliver;
(2020)
Distribution of hygiene kits during a cholera outbreak in Kasaï-Oriental, Democratic Republic of Congo: a process evaluation.
Conflict and health, 14 (1).
51-.
DOI: https://doi.org/10.1186/s13031-020-00294-w
Dabira, Edgard Diniba;
Soumare, Harouna M;
Lindsay, Steven W;
Conteh, Bakary;
Ceesay, Fatima;
Bradley, John;
Kositz, Christian;
Broekhuizen, Henk;
Kandeh, Balla;
Fehr, Alexandra E;
+8 more...
Nieto-Sanchez, Claudia;
Ribera, Joan Muela;
Peeters Grietens, Koen;
Smit, Menno Roderick;
Drakeley, Chris;
Bousema, Teun;
Achan, Jane;
D'Alessandro, Umberto;
(2020)
Mass Drug Administration With High-Dose Ivermectin and Dihydroartemisinin-Piperaquine for Malaria Elimination in an Area of Low Transmission With High Coverage of Malaria Control Interventions: Protocol for the MASSIV Cluster Randomized Clinical Trial.
JMIR research protocols, 9 (11).
e20904-.
ISSN 1929-0748
DOI: https://doi.org/10.2196/20904
Dahab, Maysoon;
van Zandvoort, Kevin;
Flasche, Stefan;
Warsame, Abdihamid;
Ratnayake, Ruwan;
Favas, Caroline;
Spiegel, Paul B;
Waldman, Ronald J;
Checchi, Francesco;
(2020)
COVID-19 control in low-income settings and displaced populations: what can realistically be done?
Conflict and Health, 14 (1).
54-.
ISSN 1752-1505
DOI: https://doi.org/10.1186/s13031-020-00296-8
Davies, Nicholas G;
Barnard, Rosanna C;
Jarvis, Christopher I;
Russell, Timothy W;
Semple, Malcolm G;
Jit, Mark;
Edmunds, W John;
Centre for Mathematical Modelling of Infectious Diseases COVID-1;
ISARIC4C investigators;
(2020)
Association of tiered restrictions and a second lockdown with COVID-19 deaths and hospital admissions in England: a modelling study.
The Lancet. Infectious diseases, 21 (4).
pp. 482-492.
ISSN 1473-3099
DOI: https://doi.org/10.1016/S1473-3099(20)30984-1
Davies, Nicholas G;
Kucharski, Adam J;
Eggo, Rosalind M;
Gimma, Amy;
Edmunds, W John;
(2020)
The effect of non-pharmaceutical interventions on COVID-19 cases, deaths and demand for hospital services in the UK: a modelling study.
MedRxiv.
DOI: https://doi.org/10.1101/2020.04.01.20049908
Item availability may be restricted.
Davies, Nicholas G;
Kucharski, Adam J;
Eggo, Rosalind M;
Gimma, Amy;
Edmunds, W John;
Centre for the Mathematical Modelling of Infectious Diseases COV;
(2020)
Effects of non-pharmaceutical interventions on COVID-19 cases, deaths, and demand for hospital services in the UK: a modelling study.
The Lancet. Public health, 5 (7).
e375-e385.
ISSN 2468-2667
DOI: https://doi.org/10.1016/S2468-2667(20)30133-X
Davies, Nicholas;
Sweeney, Sedona;
Torres-Rueda, Sergio;
Bozzani, Fiammetta;
Kitson, Nichola;
Barasa, Edwine;
Procter, Simon R;
Quaife, Matthew;
Eggo, Rosalind M;
Vassall, Anna;
+1 more...
Jit, Mark;
(2020)
The impact of Coronavirus disease 2019 (COVID-19) on health systems and household resources in Africa and South Asia.
MedRxiv.
DOI: https://doi.org/10.1101/2020.05.06.20092734
Davis, Emma L;
Lucas, Tim CD;
Borlase, Anna;
Pollington, Timothy M;
Abbott, Sam;
Ayabina, Diepreye;
Crellen, Thomas;
Hellewell, Joel;
Pi, Li;
Medley, Graham F;
+2 more...
Hollingsworth, T Déirdre;
Klepac, Petra;
(2020)
An imperfect tool: contact tracing could provide valuable reductions in COVID-19 transmission if good adherence can be achieved and maintained.
medRxiv preprint.
ISSN 1468-5833
DOI: https://doi.org/10.1101/2020.06.09.20124008
Dawa, Jeanette;
Emukule, Gideon O;
Barasa, Edwine;
Widdowson, Marc Alain;
Anzala, Omu;
van Leeuwen, Edwin;
Baguelin, Marc;
Chaves, Sandra S;
Eggo, Rosalind M;
(2020)
Seasonal influenza vaccination in Kenya: an economic evaluation using dynamic transmission modelling.
BMC MEDICINE, 18 (1).
223-.
ISSN 1741-7015
DOI: https://doi.org/10.1186/s12916-020-01687-7
Dong, Yi-Min;
Sun, Jia;
Li, Yi-Xin;
Chen, Qian;
Liu, Qing-Quan;
Sun, Zhou;
Pang, Ran;
Chen, Fei;
Xu, Bing-Yang;
Manyande, Anne;
+7 more...
Clark, Taane G;
Li, Jin-Ping;
Orhan, Ilkay Erdogan;
Tian, Yu-Ke;
Wang, Tao;
Wu, Wei;
Ye, Da-Wei;
(2020)
Development and Validation of a Nomogram for Assessing Survival in Patients With COVID-19 Pneumonia.
Clinical Infectious Diseases, 72 (4).
pp. 652-660.
ISSN 1058-4838
DOI: https://doi.org/10.1093/cid/ciaa963
Eggo, Rosalind M;
Hellewell, Joel;
Funk, Sebastian;
(2020)
Feasibility of controlling COVID-19 - Authors' reply.
The Lancet. Global health, 8 (6).
e775-.
ISSN 2214-109X
DOI: https://doi.org/10.1016/S2214-109X(20)30128-5
Emery, Jon C;
Russell, Timothy W;
Liu, Yang;
Hellewell, Joel;
Pearson, Carl Ab;
CMMID COVID-19 Working Group;
Knight, Gwenan M;
Eggo, Rosalind M;
Kucharski, Adam J;
Funk, Sebastian;
+2 more...
Flasche, Stefan;
Houben, Rein Mgj;
(2020)
The contribution of asymptomatic SARS-CoV-2 infections to transmission on the Diamond Princess cruise ship.
eLife, 9.
e58699-.
DOI: https://doi.org/10.7554/eLife.58699
Endo, A;
Funk, S;
Kucharski, AJ;
(2020)
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le Polain de Waroux, Olivier;
Ismail, Sharif;
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Childhood vaccination coverage and equity impact in Ethiopia by socioeconomic, geographic, maternal, and child characteristics.
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Hooper, PJ;
Bakhtiari, Ana;
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Mahmud, Hamidah;
Landskroner, Emma;
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Medley, Graham F;
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Bailey, Robin;
Lietman, Thomas M;
Oldenburg, Catherine E;
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Erratum to: Trachoma Prevalence After Discontinuation of Mass Azithromycin Distribution.
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Glycan–glycan interactions determine <i>Leishmania</i> attachment to the midgut of permissive sand fly vectors.
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Jarvis, Christopher I;
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Cost-effectiveness evidence for HPV self-sampling could be improved by giving greater attention to vulnerable populations.
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Selective whole genome amplification of Plasmodium malariae DNA from clinical samples reveals insights into population structure.
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Differences in the frequency of genetic variants associated with iron imbalance among global populations.
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Item availability may be restricted.
Jarvis, Christopher I;
Van Zandvoort, Kevin;
Gimma, Amy;
Prem, Kiesha;
CMMID COVID-19 working group;
Klepac, Petra;
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Quantifying the impact of physical distance measures on the transmission of COVID-19 in the UK.
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Jarvis, Christopher I;
Van Zandvoort, Kevin;
Gimma, Amy;
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Klepac, Petra;
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Quantifying the impact of physical distance measures on the transmission of COVID-19 in the UK.
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Detection of Cell-Fusing Agent virus across ecologically diverse populations of Aedes aegypti on the Caribbean island of Saint Lucia.
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Jit, Mark;
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Abbott, Sam;
LSHTM Centre for Mathematical Modelling of Infectious Diseases C;
Edmunds, W John;
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Estimating number of cases and spread of coronavirus disease (COVID-19) using critical care admissions, United Kingdom, February to March 2020.
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Russell, Timothy W;
Jarvis, Christopher I;
Gimma, Amy;
Abbott, Sam;
Clifford, Sam;
Funk, Sebastian;
Gibbs, Hamish;
Liu, Yang;
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Pearson, Carl AB;
Bosse, Nikos I;
Centre for the Mathematical Modelling of Infectious Diseases COV;
Eggo, Rosalind M;
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Inferring the number of COVID-19 cases from recently reported deaths.
medRxiv.
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Jombart, Thibaut;
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Russell, Timothy W;
Jarvis, Christopher I;
Gimma, Amy;
Abbott, Sam;
Clifford, Sam;
Funk, Sebastian;
Gibbs, Hamish;
Liu, Yang;
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Pearson, Carl AB;
Bosse, Nikos I;
Centre for the Mathematical Modelling of Infectious Diseases COV;
Eggo, Rosalind M;
Kucharski, Adam J;
Edmunds, W John;
Centre for the Mathematical Modelling of Infectious Diseases COV;
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Inferring the number of COVID-19 cases from recently reported deaths.
Wellcome Open Res, 5.
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Jombart, Thibaut;
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Russell, Timothy W;
Jarvis, Christopher I;
Gimma, Amy;
Abbott, Sam;
Clifford, Sam;
Funk, Sebastian;
Gibbs, Hamish;
Liu, Yang;
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Pearson, Carl AB;
Bosse, Nikos I;
Centre for the Mathematical Modelling of Infectious Diseases COV;
Eggo, Rosalind M;
Kucharski, Adam J;
Edmunds, W John;
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Inferring the number of COVID-19 cases from recently reported deaths.
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Jones, Robert T;
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Could bio-detection dogs be used to limit the spread of COVID-19 by travellers?
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The use of islands and cluster-randomized trials to investigate vector control interventions: a case study on the Bijagós archipelago, Guinea-Bissau.
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Kaboré, Lassané;
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Assessment of missed opportunities for vaccination (MOV) in Burkina Faso using the World Health Organization's revised MOV strategy: Findings and strategic considerations to improve routine childhood immunization coverage.
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Katale, Bugwesa Z;
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Chiyangi, Harriet;
Campino, Susana;
Clark, Taane G;
Good, Liam;
Rweyemamu, Mark M;
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Genetic diversity and risk factors for the transmission of antimicrobial resistance across human, animals and environmental compartments in East Africa: a review.
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Kielmann, Karina;
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Colvin, Christopher;
Swartz, Alison;
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Yates, Tom A;
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Vassall, Anna;
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Tuberculosis infection prevention and control: why we need a whole systems approach.
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Kombe, IK;
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Integrating viral RNA sequence and epidemiological data to
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PhD (research paper style) thesis, London School of Hygiene & Tropical Medicine.
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Kombe, Ivy K;
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Integrating epidemiological and genetic data with different sampling intensities into a dynamic model of respiratory syncytial virus transmission.
MedRxiv.
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The Lancet. Infectious diseases, 20 (9).
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Full text not available from this repository.
Kucharski, Adam J;
Funk, Sebastian;
Eggo, Rosalind M;
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The COVID-19 response illustrates that traditional academic reward structures and metrics do not reflect crucial contributions to modern science.
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Kucharski, Adam J;
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Fry, Hannah;
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CMMID COVID-19 working group;
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Leng, Trystan;
White, Connor;
Hilton, Joe;
Kucharski, Adam;
Pellis, Lorenzo;
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Davies, Nicholas G;
Centre for Mathematical Modelling of Infectious Disease 2019 nCo;
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Flasche, Stefan;
Centre for Mathematical Modelling of Infectious Disease 2019 nCo;
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The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study.
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Li, Anyie J;
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Shendale, Stephanie;
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Okoth, Peter O;
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Lim, Jacqueline Kyungah;
Matendechero, Sultani Hadley;
Alexander, Neal;
Lee, Jung-Seok;
Lee, Kang Sung;
Namkung, Suk;
Andia, Esther;
Oyembo, Noah;
Lim, Sl-Ki;
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Bae, So Hee;
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Ochola, Mary A;
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Clinical and epidemiologic characteristics associated with dengue fever in Mombasa, Kenya.
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 100.
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Liu, Yang;
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Funk, Sebastian;
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The contribution of pre-symptomatic infection to the transmission dynamics of COVID-2019.
Wellcome Open Research, 5.
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Liu, Yang;
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Secondary attack rate and superspreading events for SARS-CoV-2.
LANCET, 395 (10227).
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Lorenz, Lena M;
Bradley, John;
Yukich, Joshua;
Massue, Dennis J;
Mageni Mboma, Zawadi;
Pigeon, Olivier;
Moore, Jason;
Kilian, Albert;
Lines, Jo;
Kisinza, William;
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Overgaard, Hans J;
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Comparative functional survival and equivalent annual cost of 3 long-lasting insecticidal net (LLIN) products in Tanzania: A randomised trial with 3-year follow up.
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Léger, Elsa;
Borlase, Anna;
Fall, Cheikh B;
Diouf, Nicolas D;
Diop, Samba D;
Yasenev, Lucy;
Catalano, Stefano;
Thiam, Cheikh T;
Ndiaye, Alassane;
Emery, Aidan;
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Morrell, Alice;
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Ndao, Momar;
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Prevalence and distribution of schistosomiasis in human, livestock, and snail populations in northern Senegal: a One Health epidemiological study of a multi-host system.
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Manchanda, Ranjit;
Sun, Li;
Patel, Shreeya;
Evans, Olivia;
Wilschut, Janneke;
De Freitas Lopes, Ana Carolina;
Gaba, Faiza;
Brentnall, Adam;
Duffy, Stephen;
Cui, Bin;
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Coelho De Soarez, Patricia;
Husain, Zakir;
Hopper, John;
Sadique, Zia;
Mukhopadhyay, Asima;
Yang, Li;
Berkhof, Johannes;
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Economic Evaluation of Population-Based BRCA1/BRCA2 Mutation Testing across Multiple Countries and Health Systems.
CANCERS, 12 (7).
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Mathur, Rohini;
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Urgent actions and policies needed to address COVID-19 among UK ethnic minorities.
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Mavian, Carla;
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Marini, Simone;
Magalis, Brittany Rife;
Vandamme, Anne-Mieke;
Dellicour, Simon;
Scarpino, Samuel V;
Houldcroft, Charlotte;
Villabona-Arenas, Julian;
Paisie, Taylor K;
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Trovão, Nídia S;
Boucher, Christina;
Zhang, Yun;
Scheuermann, Richard H;
Gascuel, Olivier;
Lam, Tommy Tsan-Yuk;
Suchard, Marc A;
Abecasis, Ana;
Wilkinson, Eduan;
de Oliveira, Tulio;
Bento, Ana I;
Schmidt, Heiko A;
Martin, Darren;
Hadfield, James;
Faria, Nuno;
Grubaugh, Nathan D;
Neher, Richard A;
Baele, Guy;
Lemey, Philippe;
Stadler, Tanja;
Albert, Jan;
Crandall, Keith A;
Leitner, Thomas;
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Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable.
Proceedings of the National Academy of Sciences, 117 (23).
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McDonald, Helen I;
Tessier, Elise;
White, Joanne M;
Woodruff, Matthew;
Knowles, Charlotte;
Bates, Chris;
Parry, John;
Walker, Jemma L;
Scott, J Anthony;
Smeeth, Liam;
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Yarwood, Joanne;
Ramsay, Mary;
Edelstein, Michael;
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Early impact of the coronavirus disease (COVID-19) pandemic and physical distancing measures on routine childhood vaccinations in England, January to April 2020.
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Ongoing challenges to understanding multidrug- and rifampicin-resistant tuberculosis in children versus adults.
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The risk of multidrug- or rifampicin-resistance in males versus females with tuberculosis.
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CMMID COVID-19 Working Group;
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The potential impact of COVID-19-related disruption on tuberculosis burden.
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Megiddo, Itamar;
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Chalkidou, Kalipso;
Colson, Abigail;
Gad, Mohamed;
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Miller, Nathan P;
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Assessing community health worker service delivery in humanitarian settings.
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Minter, Amanda;
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Jagne, Ya Jankey;
Sallah, Hadijatou;
Armitage, Edwin;
Lindsey, Benjamin;
Hay, James A;
Riley, Steven;
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Estimation of Seasonal Influenza Attack Rates and Antibody Dynamics in Children Using Cross-Sectional Serological Data.
The Journal of infectious diseases, 225 (10).
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Mudimu, Edinah;
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Mukandavire, Zindoga;
Nightingale, Emily;
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Individual and community-level benefits of PrEP in western Kenya and South Africa: Implications for population prioritization of PrEP provision.
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Musa, Sanjin;
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Kulo, Aida;
Primorac, Emilija;
Smjecanin, Mirsad;
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Tailoring Immunization Programmes: using patient file data to explore vaccination uptake and associated factors.
HUMAN VACCINES & IMMUNOTHERAPEUTICS, 17 (1).
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Métras, Raphaëlle;
Edmunds, W John;
Youssouffi, Chouanibou;
Dommergues, Laure;
Fournié, Guillaume;
Camacho, Anton;
Funk, Sebastian;
Cardinale, Eric;
Le Godais, Gilles;
Combo, Soihibou;
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Filleul, Laurent;
Youssouf, Hassani;
Subiros, Marion;
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Estimation of Rift Valley fever virus spillover to humans during the Mayotte 2018-2019 epidemic.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 117 (39).
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Nacul, Luis;
O'Boyle, Shennae;
Palla, Luigi;
Nacul, Flavio E;
Mudie, Kathleen;
Kingdon, Caroline C;
Cliff, Jacqueline M;
Clark, Taane G;
Dockrell, Hazel M;
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How Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) Progresses: The Natural History of ME/CFS.
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Woldeamanuel, Yimtubezinash;
Aseffa, Abraham;
Hibberd, Martin L;
Phelan, Jody;
Clark, Taane G;
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Robust barcoding and identification of Mycobacterium tuberculosis lineages for epidemiological and clinical studies.
GENOME MEDICINE, 12 (1).
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Nightingale, Emily S;
Chapman, Lloyd AC;
Srikantiah, Sridhar;
Subramanian, Swaminathan;
Jambulingam, Purushothaman;
Bracher, Johannes;
Cameron, Mary M;
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A spatio-temporal approach to short-term prediction of visceral leishmaniasis diagnoses in India.
PLOS NEGLECTED TROPICAL DISEASES, 14 (7).
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O'Reilly, Kathleen M;
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The challenges of informative wastewater sampling for SARS-CoV-2 must be met: lessons from polio eradication.
The Lancet. Microbe, 1 (5).
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O'Reilly, Kathleen M;
Auzenbergs, Megan;
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Liu, Yang;
Flasche, Stefan;
Lowe, Rachel;
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Effective transmission across the globe: the role of climate in COVID-19 mitigation strategies.
The Lancet. Planetary health, 4 (5).
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Ochalek, Jessica;
Abbas, Kaja;
Claxton, Karl;
Jit, Mark;
Lomas, James;
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Assessing the value of human papillomavirus vaccination in Gavi-eligible low-income and middle-income countries.
BMJ global health, 5 (10).
e003006-e003006.
ISSN 2059-7908
DOI: https://doi.org/10.1136/bmjgh-2020-003006
Pearson, Carl Ab;
Van Schalkwyk, Cari;
Foss, Anna M;
O'Reilly, Kathleen M;
SACEMA Modelling and Analysis Response Team;
CMMID COVID-19 working group;
Pulliam, Juliet Rc;
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Projected early spread of COVID-19 in Africa through 1 June 2020.
Eurosurveillance, 25 (18).
pp. 19-24.
ISSN 1560-7917
DOI: https://doi.org/10.2807/1560-7917.ES.2020.25.18.2000543
Peppa, Maria;
Thomas, Sara L;
Minassian, Caroline;
Walker, Jemma L;
McDonald, Helen I;
Andrews, Nick J;
Kempley, Stephen T;
Mangtani, Punam;
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Seasonal Influenza Vaccination During Pregnancy and the Risk of Major Congenital Malformations in Live-born Infants: A 2010-2016 Historical Cohort Study.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 73 (11).
e4296-e4304.
ISSN 1537-6591
DOI: https://doi.org/10.1093/cid/ciaa845
Perdigão, João;
Caneiras, Cátia;
Elias, Rita;
Modesto, Ana;
Spadar, Anton;
Phelan, Jody;
Campino, Susana;
Clark, Taane G;
Costa, Eliana;
Saavedra, Maria José;
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Duarte, Aida;
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Genomic Epidemiology of Carbapenemase Producing Klebsiella pneumoniae Strains at a Northern Portuguese Hospital Enables the Detection of a Misidentified Klebsiella variicola KPC-3 Producing Strain.
MICROORGANISMS, 8 (12).
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Perdigão, João;
Silva, Carla;
Maltez, Fernando;
Machado, Diana;
Miranda, Anabela;
Couto, Isabel;
Rabna, Paulo;
Florez de Sessions, Paola;
Phelan, Jody;
Pain, Arnab;
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McNerney, Ruth;
Hibberd, Martin L;
Mokrousov, Igor;
Clark, Taane G;
Viveiros, Miguel;
Portugal, Isabel;
(2020)
Emergence of multidrug-resistant Mycobacterium tuberculosis of the Beijing lineage in Portugal and Guinea-Bissau: a snapshot of moving clones by whole-genome sequencing.
EMERGING MICROBES & INFECTIONS, 9 (1).
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Prem, Kiesha;
Liu, Yang;
Russell, Timothy W;
Kucharski, Adam J;
Eggo, Rosalind M;
Davies, Nicholas;
Centre for the Mathematical Modelling of Infectious Diseases COV;
Jit, Mark;
Klepac, Petra;
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The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study.
The Lancet. Public health, 5 (5).
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Procter, Simon R;
Salman, Omar;
Pecenka, Clint;
Gonçalves, Bronner P;
Paul, Proma;
Hutubessy, Raymond;
Lambach, Philipp;
Lawn, Joy E;
Jit, Mark;
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A review of the costs of delivering maternal immunisation during pregnancy.
VACCINE, 38 (40).
pp. 6199-6204.
ISSN 0264-410X
DOI: https://doi.org/10.1016/j.vaccine.2020.07.050
Quaife, Matthew;
Houben, Rein MGJ;
Allwood, Brian;
Cohen, Ted;
Coussens, Anna K;
Harries, Anthony D;
van Kampen, Sanne;
Marx, Florian M;
Sweeney, Sedona;
Wallis, Robert S;
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Menzies, Nicolas A;
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Post-tuberculosis mortality and morbidity: valuing the hidden epidemic.
The Lancet Respiratory Medicine, 8 (4).
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Quaife, Matthew;
Terris-Prestholt, Fern;
Mukandavire, Zindoga;
Vickerman, Peter;
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Modelling the effect of market forces on the impact of introducing human immunodeficiency virus pre-exposure prophylaxis among female sex workers.
HEALTH ECONOMICS, 30 (3).
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Quaife, Matthew;
van Zandvoort, Kevin;
Gimma, Amy;
Shah, Kashvi;
McCreesh, Nicky;
Prem, Kiesha;
Barasa, Edwine;
Mwanga, Daniel;
Kangwana, Beth;
Pinchoff, Jessie;
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CMMID COVID-19 Working Group;
Edmunds, W John;
Jarvis, Christopher I;
Austrian, Karen;
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The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements.
BMC Med, 18 (1).
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Quaife, Matthew;
van Zandvoort, Kevin;
Gimma, Amy;
Shah, Kashvi;
McCreesh, Nicky;
Prem, Kiesha;
Barasa, Edwine;
Mwanga, Daniel;
Kangwana, Beth;
Pinchoff, Jessie;
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Edmunds, W John;
Jarvis, Christopher I;
Austrian, Karen;
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The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements.
BMC medicine.
ISSN 1741-7015
DOI: https://doi.org/10.1101/2020.06.06.20122689
Quilty, Billy J;
Clifford, Sam;
CMMID nCoV working group2;
Flasche, Stefan;
Eggo, Rosalind M;
(2020)
Effectiveness of airport screening at detecting travellers infected with novel coronavirus (2019-nCoV).
Eurosurveillance, 25 (5).
pp. 4-9.
ISSN 1560-7917
DOI: https://doi.org/10.2807/1560-7917.ES.2020.25.5.2000080
Quilty, Billy J;
Diamond, Charlie;
Liu, Yang;
Gibbs, Hamish;
Russell, Timothy W;
Jarvis, Christopher I;
Prem, Kiesha;
Pearson, Carl AB;
Clifford, Samuel;
Flasche, Stefan;
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CMMID COVID-19 working group;
Klepac, Petra;
Eggo, Rosalind M;
Jit, Mark;
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The effect of travel restrictions on the geographical spread of COVID-19 between large cities in China: a modelling study.
BMC medicine, 18 (1).
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ISSN 1741-7015
DOI: https://doi.org/10.1186/s12916-020-01712-9
Ratnayake, Ruwan;
Finger, Flavio;
Azman, Andrew S;
Lantagne, Daniele;
Funk, Sebastian;
Edmunds, W John;
Checchi, Francesco;
(2020)
Highly targeted spatiotemporal interventions against cholera epidemics, 2000-19: a scoping review.
Lancet Infectious Diseases, 21 (3).
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ISSN 1473-3099
DOI: https://doi.org/10.1016/S1473-3099(20)30479-5
Ratnayake, Ruwan;
Finger, Flavio;
Edmunds, W John;
Checchi, Francesco;
(2020)
Early detection of cholera epidemics to support control in fragile states: estimation of delays and potential epidemic sizes.
BMC Medicine, 18 (1).
397-.
ISSN 1741-7015
DOI: https://doi.org/10.1186/s12916-020-01865-7
Rentsch, Christopher T;
Kidwai-Khan, Farah;
Tate, Janet P;
Park, Lesley S;
King, Joseph T;
Skanderson, Melissa;
Hauser, Ronald G;
Schultze, Anna;
Jarvis, Christopher I;
Holodniy, Mark;
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Lo Re, Vincent;
Akgün, Kathleen M;
Crothers, Kristina;
Taddei, Tamar H;
Freiberg, Matthew S;
Justice, Amy C;
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Patterns of COVID-19 testing and mortality by race and ethnicity among United States veterans: A nationwide cohort study.
PLOS Medicine, 17 (9).
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DOI: https://doi.org/10.1371/journal.pmed.1003379
Richards-Belle, Alvin;
Davis, Peter;
Drikite, Laura;
Feltbower, Richard;
Grieve, Richard;
Harrison, David A;
Lester, Julie;
Morris, Kevin P;
Mouncey, Paul R;
Peters, Mark J;
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Rowan, Kathryn M;
Sadique, Zia;
Tume, Lyvonne N;
Ramnarayan, Padmanabhan;
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FIRST-line support for assistance in breathing in children (FIRST-ABC): a master protocol of two randomised trials to evaluate the non-inferiority of high-flow nasal cannula (HFNC) versus continuous positive airway pressure (CPAP) for non-invasive respiratory support in paediatric critical care.
BMJ OPEN, 10 (8).
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ISSN 2044-6055
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Robert, Alexis;
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Mayaud, Philippe;
Brady, Oliver J;
Marcilio, Izabel;
Gouveia, Nelson;
Li, Guangdi;
Tami, Adriana;
de Oliveira, Silvano Barbosa;
Porto, Victor Bertollo Gomes;
Ganem, Fabiana;
de Almeida, Walquiria Aparecida Ferreira;
Fantinato, Francieli Fontana Sutile Tardetti;
Macário, Eduardo Marques;
de Oliveira, Wanderson Kleber;
Nogueira, Mauricio L;
Pybus, Oliver G;
Wu, Chieh-Hsi;
Croda, Julio;
Sabino, Ester C;
Faria, Nuno Rodrigues;
(2020)
Epidemiological and clinical characteristics of the COVID-19 epidemic in Brazil.
NATURE HUMAN BEHAVIOUR, 4 (8).
pp. 856-865.
ISSN 2397-3374
DOI: https://doi.org/10.1038/s41562-020-0928-4
van Zandvoort, Kevin;
Jarvis, Christopher I;
Pearson, Carl AB;
Davies, Nicholas G;
CMMID COVID-19 working group;
Ratnayake, Ruwan;
Russell, Timothy W;
Kucharski, Adam J;
Jit, Mark;
Flasche, Stefan;
+2 more...
Eggo, Rosalind M;
Checchi, Francesco;
(2020)
Response strategies for COVID-19 epidemics in African settings: a mathematical modelling study.
BMC Medicine, 18 (1).
324-.
ISSN 1741-7015
DOI: https://doi.org/10.1186/s12916-020-01789-2