Research Centres (26996)

Centre for Epidemic Preparedness and Response (317) Month Authors/Creators Item Type Full Text

A

Zika virus infection in pregnancy: a protocol for the joint analysis of the prospective cohort studies of the ZIKAlliance, ZikaPLAN and ZIKAction consortia. (2020) Ades, AE; Brickley, Elizabeth B; Alexander, Neal; Brown, David; Jaenisch, Thomas; Miranda-Filho, Demócrito de Barros; Pohl, Moritz; Rosenberger, Kerstin D; Soriano-Arandes, Antoni; Thorne, Claire; Ximenes, Ricardo Arraes de Alencar; de Araújo, Thalia Velho Barreto; Avelino-Silva, Vivian I; Bethencourt Castillo, Sarah Esperanza; Borja Aburto, Victor Hugo; Brasil, Patrícia; Christie, Celia DC; de Souza, Wayner Vieira; Gotuzzo H, Jose Eduardo; Hoen, Bruno; Koopmans, Marion; Martelli, Celina Maria Turchi; Martins Teixeira, Mauro; Marques, Ernesto TA; Miranda, Maria Consuelo; Montarroyos, Ulisses Ramos; Moreira, Maria Elisabeth; Morris, J Glenn; Rockx, Barry; Saba Villarroel, Paola Mariela; Soria Segarra, Carmen; Tami, Adriana; Turchi, Marília Dalva; Giaquinto, Carlo; de Lamballerie, Xavier; Wilder-Smith, Annelies; EC Zika Consortia Vertical Transmission Study Group

Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts. (2020) Abbott, Sam; Hellewell, Joel; Thompson, Robin N; Sherratt, Katharine; Gibbs, Hamish P; Bosse, Nikos I; Munday, James D; Meakin, Sophie; Doughty, Emma L; Chun, June Young; Chan, Yung-Wai Desmond; Finger, Flavio; Campbell, Paul; Endo, Akira; Pearson, Carl AB; Gimma, Amy; Russell, Tim; Flasche, Stefan; Kucharski, Adam J; Eggo, Rosalind M; Funk, Sebastian

Characterization of Posttranslationally Modified Multidrug Efflux Pumps Reveals an Unexpected Link between Glycosylation and Antimicrobial Resistance. (2020) Abouelhadid, Sherif; Raynes, John; Bui, Tam; Cuccui, Jon; Wren, Brendan W

An Empirical Analysis of Synergies and Tradeoffs between Sustainable Development Goals. (2020) Ament, Judith M; Freeman, Robin; Carbone, Chris; Vassall, Anna; Watts, Charlotte

Does being on HIV antiretroviral therapy increase the risk of syphilis? An analysis of a large national cohort of MSM living with HIV in England 2009-2016. (2020) Allen, Hester; Kirwan, Peter; Brown, Alison E; Mohammed, Hamish; Hughes, Gwenda; Marks, Michael; Delpech, Valerie description

Investigating the decline in Lymphogranuloma venereum diagnoses in men who have sex with men in the United Kingdom since 2016: an analysis of surveillance data. (2020) Allen, Hester; Pitt, Rachel; Bardsley, Megan; Smolarchuk, Christa; Sullivan, Ann; Mohammed, Hamish; Cole, Michelle; Fifer, Helen; Wallace, Lesley; Thomas, Daniel; Irvine, Neil; Templeton, Kate; Hughes, Gwenda; Simms, Ian

Does surgical procedure type impact postoperative pain and recovery in deep inferior epigastric artery perforator flap breast reconstruction? (2020) Azizi, Alexander A; Mohan, Anita T; Tomouk, Taj; Brickley, Elizabeth B; Malata, Charles M

Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts. (2020) Abbott, Sam; Hellewell, Joel; Thompson, Robin N; Sherratt, Katharine; Gibbs, Hamish P; Bosse, Nikos I; Munday, James D; Meakin, Sophie; Doughty, Emma L; Chun, June Young; Chan, Yung-Wai Desmond; Finger, Flavio; Campbell, Paul; Endo, Akira; Pearson, Carl AB; Gimma, Amy; Russell, Tim; Flasche, Stefan; Kucharski, Adam J; Eggo, Rosalind M; Funk, Sebastian

Spatiotemporal and Socioeconomic Risk Factors for Dengue at the Province Level in Vietnam, 2013-2015: Clustering Analysis and Regression Model. (2020) Ashmore, Polly; Lindahl, Johanna F; Colón-González, Felipe J; Sinh Nam, Vu; Quang Tan, Dang; Medley, Graham F

B

Parents' and guardians' views and experiences of accessing routine childhood vaccinations during the coronavirus (COVID-19) pandemic: A mixed methods study in England. (2020) Bell, Sadie; Clarke, Richard; Paterson, Pauline; Mounier-Jack, Sandra

Intestinal Antibody Responses to 2 Novel Live Attenuated Type 2 Oral Poliovirus Vaccines in Healthy Adults in Belgium. (2020) Brickley, Elizabeth B; Connor, Ruth I; Wieland-Alter, Wendy; Weiner, Joshua A; Ackerman, Margaret E; Arita, Minetaro; Gast, Chris; De Coster, Ilse; Van Damme, Pierre; Bandyopadhyay, Ananda S; Wright, Peter F picture_as_pdf

Parents’ and guardians’ views and experiences of accessing routine childhood vaccinations during the coronavirus (COVID-19) pandemic: A mixed-methods study in England. (2020) Bell, Sadie; Clarke, Richard; Paterson, Pauline; Mounier-Jack, Sandra

A serological framework to investigate acute primary and post-primary dengue cases reporting across the Philippines. (2020) Biggs, Joseph R; Sy, Ava Kristy; Brady, Oliver J; Kucharski, Adam J; Funk, Sebastian; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Tu, Yun-Hung; Avelino, Ferchito L; Sucaldito, Nemia L; Mai, Huynh Kim; Lien, Le Thuy; Do Thai, Hung; Nguyen, Hien Anh Thi; Anh, Dang Duc; Iwasaki, Chihiro; Kitamura, Noriko; Yoshida, Lay-Myint; Tandoc, Amado O; la Paz, Eva Cutiongco-de; Capeding, Maria Rosario Z; Padilla, Carmencita D; Hafalla, Julius Clemence R; Hibberd, Martin L

Towards a unified generic framework to define and observe contacts between livestock and wildlife: a systematic review. (2020) Bacigalupo, Sonny A; Dixon, Linda K; Gubbins, Simon; Kucharski, Adam J; Drewe, Julian A

Parents' and guardians' views on the acceptability of a future COVID-19 vaccine: A multi-methods study in England. (2020) Bell, Sadie; Clarke, Richard; Mounier-Jack, Sandra; Walker, Jemma L; Paterson, Pauline

Main Routes of Entry and Genomic Diversity of SARS-CoV-2, Uganda. (2020) Bugembe, Daniel Lule; Kayiwa, John; Phan, My VT; Tushabe, Phiona; Balinandi, Stephen; Dhaala, Beatrice; Lexow, Jonas; Mwebesa, Henry; Aceng, Jane; Kyobe, Henry; Ssemwanga, Deogratius; Lutwama, Julius; Kaleebu, Pontiano; Cotten, Matthew

Informing Balanced Investment in Services and Health Systems: A Case Study of Priority Setting for Tuberculosis Interventions in South Africa. (2020) Bozzani, Fiammetta M; Sumner, Tom; Mudzengi, Don; Gomez, Gabriela B; White, Richard; Vassall, Anna

Conjunctival Scarring, Corneal Pannus, and Herbert's Pits in Adolescent Children in Trachoma-endemic Populations of the Solomon Islands and Vanuatu. (2020) Butcher, Robert; Tagabasoe, Junely; Manemaka, Joseph; Bong, Annie; Garae, Mackline; Daniel, Lui; Roberts, Chrissy; Handley, Becca L; Hu, Victor H; Harding-Esch, Emma M; Bakhtiari, Ana; Willis, Rebecca; Müller, Andreas; Kaldor, John; Le Mesurier, Richard; Mabey, David; Cama, Anasaini; Sokana, Oliver; Taleo, Fasihah; Taylor, Hugh R; Solomon, Anthony W description

Zika virus vertical transmission in children with confirmed antenatal exposure. (2020) Brasil, Patrícia; Vasconcelos, Zilton; Kerin, Tara; Gabaglia, Claudia Raja; Ribeiro, Ieda P; Bonaldo, Myrna C; Damasceno, Luana; Pone, Marcos V; Pone, Sheila; Zin, Andrea; Tsui, Irena; Adachi, Kristina; Pereira, Jose Paulo; Gaw, Stephanie L; Carvalho, Liege; Cunha, Denise C; Guida, Leticia; Rocha, Mirza; Cherry, James D; Wang, Lulan; Aliyari, Saba; Cheng, Genhong; Foo, Suan-Sin; Chen, Weiqiang; Jung, Jae; Brickley, Elizabeth; Moreira, Maria Elisabeth L; Nielsen-Saines, Karin

Is flu vaccination opt-out feasible? Evidence from vaccination programme implementers and managers in the English National Health Service. (2020) Bell, Sadie; Chantler, Tracey; Paterson, Pauline; Mounier-Jack, Sandra picture_as_pdf

Responding to measles outbreaks in underserved Roma and Romanian populations in England: the critical role of community understanding and engagement. (2020) Bell, Sadie; Saliba, Vanessa; Evans, Gail; Flanagan, Stephen; Ghebrehewet, Sam; McAuslane, Helen; Sibal, Bharat; Mounier-Jack, Sandra

What have we learnt from measles outbreaks in 3 English cities? A qualitative exploration of factors influencing vaccination uptake in Romanian and Roma Romanian communities. (2020) Bell, Sadie; Saliba, Vanessa; Ramsay, Mary; Mounier-Jack, Sandra

C

CoMix: comparing mixing patterns in the Belgian population during and after lockdown. (2020) Coletti, Pietro; Wambua, James; Gimma, Amy; Willem, Lander; Vercruysse, Sarah; Vanhoutte, Bieke; Jarvis, Christopher I; Van Zandvoort, Kevin; Edmunds, John; Beutels, Philippe; Hens, Niel

Serovar-dependent differences in Hfq-regulated phenotypes in Actinobacillus pleuropneumoniae. (2020) Crispim, Josicelli Souza; da Silva, Thyara Ferreira; Sanches, Newton Moreno; da Silva, Giarlã Cunha; Pereira, Monalessa Fábia; Rossi, Ciro César; Li, Yanwen; Terra, Vanessa Sofia; Vohra, Prerna; Wren, Brendan W; Langford, Paul R; Bossé, Janine T; Bazzolli, Denise Mara Soares

Does electronic consent improve the logistics and uptake of HPV vaccination in adolescent girls? A mixed-methods theory informed evaluation of a pilot intervention. (2020) Chantler, Tracey; Pringle, Ellen; Bell, Sadie; Cooper, Rosie; Edmundson, Emily; Nielsen, Heidi; Roberts, Sheila; Edelstein, Michael; Mounier-Jack, Sandra picture_as_pdf

Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism. (2020) Chaguza, Chrispin; Yang, Marie; Cornick, Jennifer E; du Plessis, Mignon; Gladstone, Rebecca A; Kwambana-Adams, Brenda A; Lo, Stephanie W; Ebruke, Chinelo; Tonkin-Hill, Gerry; Peno, Chikondi; Senghore, Madikay; Obaro, Stephen K; Ousmane, Sani; Pluschke, Gerd; Collard, Jean-Marc; Sigaùque, Betuel; French, Neil; Klugman, Keith P; Heyderman, Robert S; McGee, Lesley; Antonio, Martin; Breiman, Robert F; von Gottberg, Anne; Everett, Dean B; Kadioglu, Aras; Bentley, Stephen D

Inferring transmission trees to guide targeting of interventions against visceral leishmaniasis and post-kala-azar dermal leishmaniasis. (2020) Chapman, Lloyd AC; Spencer, Simon EF; Pollington, Timothy M; Jewell, Chris P; Mondal, Dinesh; Alvar, Jorge; Hollingsworth, T Déirdre; Cameron, Mary M; Bern, Caryn; Medley, Graham F

Correction to: A Systematic Review of Methodological Variation in Healthcare Provider Perspective Tuberculosis Costing Papers Conducted in Low- and Middle-Income Settings, Using An Intervention-Standardised Unit Cost Typology. (2020) Cunnama, Lucy; Gomez, Gabriela B; Siapka, Mariana; Herzel, Ben; Hill, Jeremy; Kairu, Angela; Levin, Carol; Okello, Dickson; DeCormier Plosky, Willyanne; Garcia Baena, Inés; Sweeney, Sedona; Vassall, Anna; Sinanovic, Edina

Dynamics of SARS-CoV-2 with waning immunity in the UK population. (2020) Crellen, Thomas; Pi, Li; Davis, Emma L; Pollington, Timothy M; Lucas, Tim CD; Ayabina, Diepreye; Borlase, Anna; Toor, Jaspreet; Prem, Kiesha; Medley, Graham F; Klepac, Petra; Déirdre Hollingsworth, T

Within-host microevolution of Streptococcus pneumoniae is rapid and adaptive during natural colonisation. (2020) Chaguza, Chrispin; Senghore, Madikay; Bojang, Ebrima; Gladstone, Rebecca A; Lo, Stephanie W; Tientcheu, Peggy-Estelle; Bancroft, Rowan E; Worwui, Archibald; Foster-Nyarko, Ebenezer; Ceesay, Fatima; Okoi, Catherine; McGee, Lesley; Klugman, Keith P; Breiman, Robert F; Barer, Michael R; Adegbola, Richard A; Antonio, Martin; Bentley, Stephen D; Kwambana-Adams, Brenda A

Geographies of risk: Emerging infectious diseases and travel health data. (2020) Clemente, Nuria Sanchez; Ramond, Anna; Turchi Martelli, Celina Maria; Brickley, Elizabeth B

Global, regional, and national estimates of the population at increased risk of severe COVID-19 due to underlying health conditions in 2020: a modelling study. (2020) Clark, Andrew; Jit, Mark; Warren-Gash, Charlotte; Guthrie, Bruce; Wang, Harry HX; Mercer, Stewart W; Sanderson, Colin; McKee, Martin; Troeger, Christopher; Ong, Kanyin L; Checchi, Francesco; Perel, Pablo; Joseph, Sarah; Gibbs, Hamish P; Banerjee, Amitava; Eggo, Rosalind M; Centre for the Mathematical Modelling of Infectious Diseases COV

D

Association of tiered restrictions and a second lockdown with COVID-19 deaths and hospital admissions in England: a modelling study. (2020) Davies, Nicholas G; Barnard, Rosanna C; Jarvis, Christopher I; Russell, Timothy W; Semple, Malcolm G; Jit, Mark; Edmunds, W John; Centre for Mathematical Modelling of Infectious Diseases COVID-1; ISARIC4C investigators

Surgical findings in cryptorchidism in children with Zika-related microcephaly: a case series. (2020) de Vasconcelos, Rômulo AL; Ximenes, Ricardo AA; Calado, Adriano A; Martelli, Celina MT; Gonçalves, Andreia V; Brickley, Elizabeth B; de Araújo, Thalia VB; Rocha, Maria AW; Miranda-Filho, Demócrito de B

Correction: Geographic and socioeconomic factors associated with leprosy treatment default: An analysis from the 100 Million Brazilian Cohort. (2020) de Andrade, Kaio Vinicius Freitas; Nery, Joilda Silva; Pescarini, Julia Moreira; Ramond, Anna; Carlos Antônio de Souza Teles Santos; Ichihara, Maria Yury; Fernandes Penna, Maria Lucia; Brickley, Elizabeth B; Rodrigues, Laura C; Smeeth, Liam; Barreto, Mauricio L; Pereira, Susan Martins; Penna, Gerson Oliveira

An imperfect tool: contact tracing could provide valuable reductions in COVID-19 transmission if good adherence can be achieved and maintained. (2020) Davis, Emma L; Lucas, Tim CD; Borlase, Anna; Pollington, Timothy M; Abbott, Sam; Ayabina, Diepreye; Crellen, Thomas; Hellewell, Joel; Pi, Li; Medley, Graham F; Hollingsworth, T Déirdre; Klepac, Petra

Seasonal influenza vaccination in Kenya: an economic evaluation using dynamic transmission modelling. (2020) Dawa, Jeanette; Emukule, Gideon O; Barasa, Edwine; Widdowson, Marc Alain; Anzala, Omu; van Leeuwen, Edwin; Baguelin, Marc; Chaves, Sandra S; Eggo, Rosalind M

COVID-19 control in low-income settings and displaced populations: what can realistically be done? (2020) Dahab, Maysoon; van Zandvoort, Kevin; Flasche, Stefan; Warsame, Abdihamid; Ratnayake, Ruwan; Favas, Caroline; Spiegel, Paul B; Waldman, Ronald J; Checchi, Francesco

Improving protein glycan coupling technology (PGCT) for glycoconjugate vaccine production. (2020) Dow, Jennifer Mhairi; Mauri, Marta; Scott, Timothy Alexander; Wren, Brendan William picture_as_pdf

Effects of non-pharmaceutical interventions on COVID-19 cases, deaths, and demand for hospital services in the UK: a modelling study. (2020) Davies, Nicholas G; Kucharski, Adam J; Eggo, Rosalind M; Gimma, Amy; Edmunds, W John; Centre for the Mathematical Modelling of Infectious Diseases COV

The impact of Coronavirus disease 2019 (COVID-19) on health systems and household resources in Africa and South Asia. (2020) Davies, Nicholas; Sweeney, Sedona; Torres-Rueda, Sergio; Bozzani, Fiammetta; Kitson, Nichola; Barasa, Edwine; Procter, Simon R; Quaife, Matthew; Eggo, Rosalind M; Vassall, Anna; Jit, Mark

Cryptorchidism in Children with Zika-Related Microcephaly. (2020) de Vasconcelos, Rômulo AL; Ximenes, Ricardo AA; Calado, Adriano A; Martelli, Celina MT; Gonçalves, Andreia V; Brickley, Elizabeth B; de Araújo, Thalia VB; Wanderley Rocha, Maria Angela; Miranda-Filho, Demócrito de B

E

Bias correction methods for test-negative designs in the presence of misclassification. (2020) Endo, A; Funk, S; Kucharski, AJ

Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK. (2020) Enria, Luisa; Waterlow, Naomi; Rogers, Nina T; Brindle, Hannah; Lal, Sham; Eggo, Rosalind M; Lees, Shelley; Roberts, Chrissy H

The contribution of asymptomatic SARS-CoV-2 infections to transmission on the Diamond Princess cruise ship. (2020) Emery, Jon C; Russell, Timothy W; Liu, Yang; Hellewell, Joel; Pearson, Carl Ab; CMMID COVID-19 Working Group; Knight, Gwenan M; Eggo, Rosalind M; Kucharski, Adam J; Funk, Sebastian; Flasche, Stefan; Houben, Rein Mgj

The Etiology of Pneumonia From Analysis of Lung Aspirate and Pleural Fluid Samples: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study. (2020) Ebruke, Bernard E; Deloria Knoll, Maria; Haddix, Meredith; Zaman, Syed MA; Prosperi, Christine; Feikin, Daniel R; Hammitt, Laura L; Levine, Orin S; O'Brien, Katherine L; Murdoch, David R; Brooks, W Abdullah; Scott, J Anthony G; Kotloff, Karen L; Madhi, Shabir A; Thea, Donald M; Baillie, Vicky L; Chisti, Mohammod Jobayer; Dione, Michel; Driscoll, Amanda J; Fancourt, Nicholas; Karron, Ruth A; Le, Tham T; Mohamed, Shebe; Moore, David P; Morpeth, Susan C; Mwaba, John; Mwansa, James; Bin Shahid, Abu Sadat Mohammad Sayeem; Sow, Samba O; Tapia, Milagritos D; Antonio, Martin; Howie, Stephen RC description

Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China. (2020) Endo, Akira; Centre for the Mathematical Modelling of Infectious Diseases COV; Abbott, Sam; Kucharski, Adam J; Funk, Sebastian

Feasibility of controlling COVID-19 - Authors' reply. (2020) Eggo, Rosalind M; Hellewell, Joel; Funk, Sebastian

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Short-term forecasts to inform the response to the Covid-19 epidemic in the UK. (2020) Funk, S; Abbott, S; Atkins, BD; Baguelin, M; Baillie, JK; Birrell, P; Blake, J; Bosse, NI; Burton, J; Carruthers, J; Davies, NG; De Angelis, D; Dyson, L; Edmunds, WJ; Eggo, RM; Ferguson, NM; Gaythorpe, K; Gorsich, E; Guyver-Fletcher, G; Hellewell, J; Hill, EM; Holmes, A; House, TA; Jewell, C; Jit, M; Jombart, T; Joshi, I; Keeling, MJ; Kendall, E; Knock, ES; Kucharski, AJ; Lythgoe, KA; Meakin, SR; Munday, JD; Openshaw, PJM; Overton, CE; Pagani, F; Pearson, J; Perez-Guzman, PN; Pellis, L; Scarabel, F; Semple, MG; Sherratt, K; Tang, M; Tildesley, MJ; Van Leeuwen, E; Whittles, LK

Genomic diversity of Escherichia coli isolates from backyard chickens and guinea fowl in the Gambia. (2020) Foster-Nyarko, Ebenezer; Alikhan, Nabil-Fareed; Ravi, Anuradha; Thomson, Nicholas M; Jarju, Sheikh; Kwambana-Adams, Brenda A; Secka, Arss; O'Grady, Justin; Antonio, Martin; Pallen, Mark John

Co-production of an educational package for the universal human papillomavirus (HPV) vaccination programme tailored for schools with low uptake: a participatory study protocol. (2020) Fisher, Harriet; Audrey, Suzanne; Chantler, Tracey; Finn, Adam; Letley, Louise; Mounier-Jack, Sandra; Thomas, Clare; Yates, Julie; Hickman, Matthew picture_as_pdf

Genomic diversity of Escherichia coli isolates from non-human primates in the Gambia. (2020) Foster-Nyarko, Ebenezer; Alikhan, Nabil-Fareed; Ravi, Anuradha; Thilliez, Gaëtan; Thomson, Nicholas M; Baker, David; Kay, Gemma; Cramer, Jennifer D; O'Grady, Justin; Antonio, Martin; Pallen, Mark J

Using a real-world network to model localized COVID-19 control strategies. (2020) Firth, Josh A; Hellewell, Joel; Klepac, Petra; Kissler, Stephen; CMMID COVID-19 Working Group; Kucharski, Adam J; Spurgin, Lewis G

Genomic diversity of<i>Escherichia coli</i>isolates from non-human primates in the Gambia. (2020) Foster-Nyarko, Ebenezer; Alikhan, Nabil-Fareed; Ravi, Anuradha; Thilliez, Gaëtan; Thomson, Nicholas; Baker, David; Kay, Gemma; Cramer, Jennifer D; O’Grady, Justin; Antonio, Martin; Pallen, Mark J

Re-sensitization of Mycobacterium smegmatis to Rifampicin Using CRISPR Interference Demonstrates Its Utility for the Study of Non-essential Drug Resistance Traits. (2020) Faulkner, Valwynne; Cox, Adrienne Adele; Goh, Shan; van Bohemen, Annelies; Gibson, Amanda J; Liebster, Oliver; Wren, Brendan W; Willcocks, Sam; Kendall, Sharon L

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Time to Scale Up Preexposure Prophylaxis Beyond the Highest-Risk Populations? Modeling Insights From High-Risk Women in Sub-Saharan Africa. (2020) Grant, Hannah; Gomez, Gabriela B; Kripke, Katharine; Barnabas, Ruanne V; Watts, Charlotte; Medley, Graham F; Mukandavire, Zindoga description

Detecting behavioural changes in human movement to inform the spatial scale of interventions against COVID-19. (2020) Gibbs, Hamish; Nightingale, Emily; Liu, Yang; Cheshire, James; Danon, Leon; Smeeth, Liam; Pearson, Carl AB; Grundy, Chris; Kucharski, Adam J; Eggo, Rosalind M

Estimating Cost Functions for Resource Allocation Using Transmission Models: A Case Study of Tuberculosis Case Finding in South Africa. (2020) Gomez, Gabriela B; Mudzengi, Don L; Bozzani, Fiammetta; Menzies, Nicholas A; Vassall, Anna

Changing travel patterns in China during the early stages of the COVID-19 pandemic. (2020) Gibbs, Hamish; Liu, Yang; Pearson, Carl AB; Jarvis, Christopher I; Grundy, Chris; Quilty, Billy J; Diamond, Charlie; LSHTM CMMID COVID-19 working group; Eggo, Rosalind M

Estimated effectiveness of symptom and risk screening to prevent the spread of COVID-19. (2020) Gostic, Katelyn; Gomez, Ana Cr; Mummah, Riley O; Kucharski, Adam J; Lloyd-Smith, James O

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Effect of repeated epilation for minor trachomatous trichiasis on lash burden, phenotype and surgical management willingness: A cohort study. (2020) Habtamu, Esmael; Wondie, Tariku; Gobezie, Wubshet; Tadesse, Zerihun; Gashaw, Bizuayehu; Gebeyehu, Abebaw; Roberts, Chrissy H; Callahan, E Kelly; Macleod, David; Burton, Matthew J

Estimating the effectiveness of routine asymptomatic PCR testing at different frequencies for the detection of SARS-CoV-2 infections. (2020) Hellewell, Joel; Russell, Timothy W; Beale, Rupert; Kelly, Gavin; Houlihan, Catherine; Nastouli, Eleni; Kucharski, Adam J

Clostridioides difficile para-Cresol Production Is Induced by the Precursor para-Hydroxyphenylacetate. (2020) Harrison, Mark A; Faulds-Pain, Alexandra; Kaur, Harparkash; Dupuy, Bruno; Henriques, Adriano O; Martin-Verstraete, Isabelle; Wren, Brendan W; Dawson, Lisa F

Clostridioides difficile para-Cresol Production Is Induced by the Precursor para-Hydroxyphenylacetate. (2020) Harrison, Mark A; Faulds-Pain, Alexandra; Kaur, Harparkash; Dupuy, Bruno; Henriques, Adriano O; Martin-Verstraete, Isabelle; Wren, Brendan W; Dawson, Lisa F

On the fallibility of simulation models in informing pandemic responses - Authors' reply. (2020) Hellewell, Joel; Funk, Sebastian; Eggo, Rosalind M

Evaluation of the recombinant proteins RlpB and VacJ as a vaccine for protection against Glaesserella parasuis in pigs. (2020) Hau, Samantha J; Luan, Shi-Lu; Loving, Crystal L; Nicholson, Tracy L; Wang, Jinhong; Peters, Sarah E; Seilly, David; Weinert, Lucy A; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Maskell, Duncan J; Tucker, Alexander W; Brockmeier, Susan L; BRaDP1T Consortium

An open source tool to infer epidemiological and immunological dynamics from serological data: serosolver. (2020) Hay, James A; Minter, Amanda; Ainslie, Kylie EC; Lessler, Justin; Yang, Bingyi; Cummings, Derek AT; Kucharski, Adam J; Riley, Steven

Zika seroprevalence declines and neutralizing antibodies wane in adults following outbreaks in French Polynesia and Fiji. (2020) Henderson, Alasdair D; Aubry, Maite; Kama, Mike; Vanhomwegen, Jessica; Teissier, Anita; Mariteragi-Helle, Teheipuaura; Paoaafaite, Tuterarii; Teissier, Yoann; Manuguerra, Jean-Claude; Edmunds, John; Whitworth, Jimmy; Watson, Conall H; Lau, Colleen L; Cao-Lormeau, Van-Mai; Kucharski, Adam J

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Inferring the number of COVID-19 cases from recently reported deaths. (2020) Jombart, Thibaut; van Zandvoort, Kevin; Russell, Timothy W; Jarvis, Christopher I; Gimma, Amy; Abbott, Sam; Clifford, Sam; Funk, Sebastian; Gibbs, Hamish; Liu, Yang; Pearson, Carl AB; Bosse, Nikos I; Centre for the Mathematical Modelling of Infectious Diseases COV; Eggo, Rosalind M; Kucharski, Adam J; Edmunds, W John

The cost of insecurity: from flare-up to control of a major Ebola virus disease hotspot during the outbreak in the Democratic Republic of the Congo, 2019. (2020) Jombart, Thibaut; Jarvis, Christopher I; Mesfin, Samuel; Tabal, Nabil; Mossoko, Mathias; Mpia, Luigino Minikulu; Abedi, Aaron Aruna; Chene, Sonia; Forbin, Ekokobe Elias; Belizaire, Marie Roseline D; de Radiguès, Xavier; Ngombo, Richy; Tutu, Yannick; Finger, Flavio; Crowe, Madeleine; Edmunds, W John; Nsio, Justus; Yam, Abdoulaye; Diallo, Boubacar; Gueye, Abdou Salam; Ahuka-Mundeke, Steve; Yao, Michel; Fall, Ibrahima Socé picture_as_pdf

K

The COVID-19 response illustrates that traditional academic reward structures and metrics do not reflect crucial contributions to modern science. (2020) Kucharski, Adam J; Funk, Sebastian; Eggo, Rosalind M

Effectiveness of isolation, testing, contact tracing, and physical distancing on reducing transmission of SARS-CoV-2 in different settings: a mathematical modelling study. (2020) Kucharski, Adam J; Klepac, Petra; Conlan, Andrew JK; Kissler, Stephen M; Tang, Maria L; Fry, Hannah; Gog, Julia R; Edmunds, W John; CMMID COVID-19 working group

Entamoeba and Giardia parasites implicated as hosts of CRESS viruses. (2020) Kinsella, Cormac M; Bart, Aldert; Deijs, Martin; Broekhuizen, Patricia; Kaczorowska, Joanna; Jebbink, Maarten F; van Gool, Tom; Cotten, Matthew; van der Hoek, Lia

The impact of Covid-19, associated behaviours and policies on the UK economy: A computable general equilibrium model. (2020) Keogh-Brown, Marcus R; Jensen, Henning Tarp; Edmunds, W John; Smith, Richard D

Etiology of Pediatric Meningitis in West Africa Using Molecular Methods in the Era of Conjugate Vaccines against Pneumococcus, Meningococcus, and Haemophilus influenzae Type b. (2020) Kwambana-Adams, Brenda A; Liu, Jie; Okoi, Catherine; Mwenda, Jason M; Mohammed, Nuredin I; Tsolenyanu, Enyonam; Renner, Lorna Awo; Ansong, Daniel; Tagbo, Beckie N; Bashir, Muhammad F; Hama, Mamadou Kourna; Sonko, Mouhamadou A; Gratz, Jean; Worwui, Archibald; Ndow, Peter; Cohen, Adam L; Serhan, Fatima; Mihigo, Richard; Antonio, Martin; Houpt, Eric; Paediatric Bacterial Meningitis Surveillance Network in West Afr

Tuberculosis infection prevention and control: why we need a whole systems approach. (2020) Kielmann, Karina; Karat, Aaron S; Zwama, Gimenne; Colvin, Christopher; Swartz, Alison; Voce, Anna S; Yates, Tom A; MacGregor, Hayley; McCreesh, Nicky; Kallon, Idriss; Vassall, Anna; Govender, Indira; Seeley, Janet; Grant, Alison D

Invisible spread of SARS-CoV-2 - Authors' reply. (2020) Kucharski, Adam J; Eggo, Rosalind M

Early dynamics of transmission and control of COVID-19: a mathematical modelling study. (2020) Kucharski, Adam J; Russell, Timothy W; Diamond, Charlie; Liu, Yang; Edmunds, John; Funk, Sebastian; Eggo, Rosalind M; Centre for Mathematical Modelling of Infectious Diseases COVID-1

Early dynamics of transmission and control of COVID-19: a mathematical modelling study. (2020) Kucharski, Adam J; Russell, Timothy W; Diamond, Charlie; Liu, Yang; Edmunds, John; Funk, Sebastian; Eggo, Rosalind M

Correction to: Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. (2020) Kamau, Everlyn; Oketch, John W; de Laurent, Zaydah R; Phan, My VT; Agoti, Charles N; Nokes, D James; Cotten, Matthew

Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. (2020) Kamau, Everlyn; Oketch, John W; de Laurent, Zaydah R; Phan, My VT; Agoti, Charles N; Nokes, D James; Cotten, Matthew

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The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study. (2020) Leng, Trystan; White, Connor; Hilton, Joe; Kucharski, Adam; Pellis, Lorenzo; Stage, Helena; Davies, Nicholas G; Centre for Mathematical Modelling of Infectious Disease 2019 nCo; Keeling, Matt J; Flasche, Stefan

The frequency and clinical presentation of Zika virus coinfections: a systematic review. (2020) Lobkowicz, Ludmila; Ramond, Anna; Sanchez Clemente, Nuria; Ximenes, Ricardo Arraes de Alencar; Miranda-Filho, Demócrito de Barros; Montarroyos, Ulisses Ramos; Martelli, Celina Maria Turchi; de Araújo, Thalia Velho Barreto; Brickley, Elizabeth B

Diarrhoeal disease and subsequent risk of death in infants and children residing in low-income and middle-income countries: analysis of the GEMS case-control study and 12-month GEMS-1A follow-on study. (2020) Levine, Myron M; Nasrin, Dilruba; Acácio, Sozinho; Bassat, Quique; Powell, Helen; Tennant, Sharon M; Sow, Samba O; Sur, Dipika; Zaidi, Anita KM; Faruque, Abu SG; Hossain, M Jahangir; Alonso, Pedro L; Breiman, Robert F; O'Reilly, Ciara E; Mintz, Eric D; Omore, Richard; Ochieng, John B; Oundo, Joseph O; Tamboura, Boubou; Sanogo, Doh; Onwuchekwa, Uma; Manna, Byomkesh; Ramamurthy, Thandavarayan; Kanungo, Suman; Ahmed, Shahnawaz; Qureshi, Shahida; Quadri, Farheen; Hossain, Anowar; Das, Sumon K; Antonio, Martin; Saha, Debasish; Mandomando, Inacio; Blackwelder, William C; Farag, Tamer; Wu, Yukun; Houpt, Eric R; Verweiij, Jaco J; Sommerfelt, Halvor; Nataro, James P; Robins-Browne, Roy M; Kotloff, Karen L

M

Individual and community-level benefits of PrEP in western Kenya and South Africa: Implications for population prioritization of PrEP provision. (2020) Mudimu, Edinah; Peebles, Kathryn; Mukandavire, Zindoga; Nightingale, Emily; Sharma, Monisha; Medley, Graham F; Klein, Daniel J; Kripke, Katharine; Bershteyn, Anna

Transmission of COVID-19 in 282 clusters in Catalonia, Spain: a cohort study. (2020) Marks, Michael; Millat-Martinez, Pere; Ouchi, Dan; Roberts, Chrissy H; Alemany, Andrea; Corbacho-Monné, Marc; Ubals, Maria; Tobias, Aurelio; Tebé, Cristian; Ballana, Ester; Vall-Mayans, Martí; G-Beiras, Camila; Prat, Nuria; Ara, Jordi; Clotet, Bonaventura; Mitjà, Oriol

The Antimicrobial Peptide, Bactenecin 5, Supports Cell-Mediated but Not Humoral Immunity in the Context of a Mycobacterial Antigen Vaccine Model. (2020) Munshi, Tulika; Sparrow, Adam; Wren, Brendan W; Reljic, Rajko; Willcocks, Samuel J

Urgent actions and policies needed to address COVID-19 among UK ethnic minorities. (2020) Mathur, Rohini; Bear, Laura; Khunti, Kamlesh; Eggo, Rosalind M

Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce Campylobacter. (2020) McKenna, Aaron; Ijaz, Umer Zeeshan; Kelly, Carmel; Linton, Mark; Sloan, William T; Green, Brian D; Lavery, Ursula; Dorrell, Nick; Wren, Brendan W; Richmond, Anne; Corcionivoschi, Nicolae; Gundogdu, Ozan

Health service needs and perspectives of remote forest communities in Papua New Guinea: study protocol for combined clinical and rapid anthropological assessments with parallel treatment of urgent cases. (2020) Middleton, Jo; Abdad, Mohammad Yazid; Beauchamp, Emilie; Colthart, Gavin; Cooper, Maxwell JF; Dem, Francesca; Fairhead, James; Grundy, Caroline L; Head, Michael G; Inacio, Joao; Jimbudo, Mavis; Jones, Christopher Iain; Konecna, Martina; Laman, Moses; MacGregor, Hayley; Novotny, Vojtech; Peck, Mika; Paliau, Jason; Philip, Jonah; Pomat, Willie; Roberts, Chrissy H; Sui, Shen; Stewart, Alan J; Walker, Stephen L; Cassell, Jackie A

Estimation of Rift Valley fever virus spillover to humans during the Mayotte 2018-2019 epidemic. (2020) Métras, Raphaëlle; Edmunds, W John; Youssouffi, Chouanibou; Dommergues, Laure; Fournié, Guillaume; Camacho, Anton; Funk, Sebastian; Cardinale, Eric; Le Godais, Gilles; Combo, Soihibou; Filleul, Laurent; Youssouf, Hassani; Subiros, Marion

Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce<i>Campylobacter</i>. (2020) McKenna, Aaron; Ijaz, Umer Zeeshan; Kelly, Carmel; Linton, Mark; Sloan, William; Green, Brian; Lavery, Ursula; Dorrell, Nick; Wren, Brendan; Richmond, Anne; Corcionivoschi, Nicolae; Gundogdu, Ozan

Estimation of Seasonal Influenza Attack Rates and Antibody Dynamics in Children Using Cross-Sectional Serological Data. (2020) Minter, Amanda; Hoschler, Katja; Jagne, Ya Jankey; Sallah, Hadijatou; Armitage, Edwin; Lindsey, Benjamin; Hay, James A; Riley, Steven; de Silva, Thushan I; Kucharski, Adam J

Increased resolution of African swine fever virus genome patterns based on profile HMMs of protein domains. (2020) Masembe, Charles; Phan, My VT; Robertson, David L; Cotten, Matthew

COVID-19 pandemic in west Africa. (2020) Martinez-Alvarez, Melisa; Jarde, Alexander; Usuf, Effua; Brotherton, Helen; Bittaye, Mustapha; Samateh, Ahmadou L; Antonio, Martin; Vives-Tomas, Joan; D'Alessandro, Umberto; Roca, Anna

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Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples. (2020) Nalumansi, Aminah; Lutalo, Tom; Kayiwa, John; Watera, Christine; Balinandi, Stephen; Kiconco, Jocelyn; Nakaseegu, Joweria; Olara, Denis; Odwilo, Emmanuel; Serwanga, Jennifer; Kikaire, Bernard; Ssemwanga, Deogratius; Nabadda, Susan; Ssewanyana, Isaac; Atwine, Diane; Mwebesa, Henry; Bosa, Henry Kyobe; Nsereko, Christopher; Cotten, Matthew; Downing, Robert; Lutwama, Julius; Kaleebu, Pontiano

Setting a baseline for global urban virome surveillance in sewage. (2020) Nieuwenhuijse, David F; Oude Munnink, Bas B; Phan, My VT; Global Sewage Surveillance project consortium; Munk, Patrick; Venkatakrishnan, Shweta; Aarestrup, Frank M; Cotten, Matthew; Koopmans, Marion PG

An e-registry for household contacts exposed to multidrug resistant TB in Mongolia. (2020) Naker, Kush; Gaskell, Katherine M; Dorjravdan, Munhjargal; Dambaa, Naranzul; Roberts, Chrissy H; Moore, David AJ

A comprehensive framework for considering additional unintended consequences in economic evaluation. (2020) Nymark, Liv; Vassall, Anna

A spatio-temporal approach to short-term prediction of visceral leishmaniasis diagnoses in India. (2020) Nightingale, Emily S; Chapman, Lloyd AC; Srikantiah, Sridhar; Subramanian, Swaminathan; Jambulingam, Purushothaman; Bracher, Johannes; Cameron, Mary M; Medley, Graham F

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Comparison of Oropharyngeal Dysphagia in Brazilian Children with Prenatal Exposure to Zika Virus, With and Without Microcephaly. (2020) Oliveira, Danielle Maria da Silva; Miranda-Filho, Demócrito de Barros; Ximenes, Ricardo Arraes de Alencar; Montarroyos, Ulisses Ramos; Martelli, Celina Maria Turchi; Brickley, Elizabeth B; Gouveia, Mariana de Carvalho Leal; Ramos, Regina Coeli; Rocha, Maria Ângela Wanderley; Araujo, Thalia Velho Barreto de; Eickmann, Sophie Helena; Rodrigues, Laura Cunha; Bernardes, Jeyse Polliane de Oliveira Soares; Pinto, Maria Helena Teixeira; Soares, Karina Polo Norte Danda; Araújo, Claudia Marina Tavares de; Militão-Albuquerque, Maria de Fátima Pessoa; Santos, Ana Célia Oliveira Dos

Factors associated with reporting antibiotic use as STI prophylaxis among HIV PrEP users: findings from a cross-sectional online community survey, May-July 2019, UK. (2020) O'Halloran, Charlotte; Croxford, Sara; Mohammed, Hamish; Gill, Owen Noel; Hughes, Gwenda; Fifer, Helen; Allen, Hester; Owen, Greg; Nutland, Will; Delpech, Valerie; Saunders, John Michael

Comparative genomics shows differences in the electron transport and carbon metabolic pathways of Mycobacterium africanum relative to Mycobacterium tuberculosis and suggests an adaptation to low oxygen tension. (2020) Ofori-Anyinam, Boatema; Riley, Abi Janet; Jobarteh, Tijan; Gitteh, Ensa; Sarr, Binta; Faal-Jawara, Tutty Isatou; Rigouts, Leen; Senghore, Madikay; Kehinde, Aderemi; Onyejepu, Nneka; Antonio, Martin; de Jong, Bouke C; Gehre, Florian; Meehan, Conor J

Surveillance of endemic human coronaviruses (HCoV-NL63, OC43 and 229E) associated with childhood pneumonia in Kilifi, Kenya. (2020) Otieno, Grieven P; Murunga, Nickson; Agoti, Charles N; Gallagher, Katherine E; Awori, Juliet O; Nokes, D James

Surveillance of endemic human coronaviruses (HCoV-NL63, OC43 and 229E) associated with pneumonia in Kilifi, Kenya. (2020) Otieno, Grieven P; Murunga, Nickson; Agoti, Charles N; Gallagher, Katherine E; Awori, Juliet O; Nokes, D James

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Conditional Cash Transfer Program and Leprosy Incidence: Analysis of 12.9 Million Families From the 100 Million Brazilian Cohort. (2020) Pescarini, Julia M; Williamson, Elizabeth; Ichihara, Maria Y; Fiaccone, Rosemeire L; Forastiere, Laura; Ramond, Anna; Nery, Joilda Silva; Penna, Maria Lucia F; Strina, Agostino; Reis, Sandra; Smeeth, Liam; Rodrigues, Laura C; Brickley, Elizabeth B; Penna, Gerson O; Barreto, Mauricio L

Examining the Association of Socioeconomic Position with Microcephaly and Delayed Childhood Neurodevelopment among Children with Prenatal Zika Virus Exposure. (2020) Power, Grace M; Francis, Suzanna C; Sanchez Clemente, Nuria; Vasconcelos, Zilton; Brasil, Patricia; Nielsen-Saines, Karin; Brickley, Elizabeth B; Moreira, Maria E

Comparisons between countries are essential for the control of COVID-19. (2020) Pearce, Neil; Lawlor, Deborah A; Brickley, Elizabeth B

Effect of a conditional cash transfer programme on leprosy treatment adherence and cure in patients from the nationwide 100 Million Brazilian Cohort: a quasi-experimental study. (2020) Pescarini, Julia M; Williamson, Elizabeth; Nery, Joilda S; Ramond, Anna; Ichihara, Maria Yury; Fiaccone, Rosemeire L; Penna, Maria Lucia F; Smeeth, Liam; Rodrigues, Laura C; Penna, Gerson O; Brickley, Elizabeth B; Barreto, Mauricio L

The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study. (2020) Prem, Kiesha; Liu, Yang; Russell, Timothy W; Kucharski, Adam J; Eggo, Rosalind M; Davies, Nicholas; Centre for the Mathematical Modelling of Infectious Diseases COV; Jit, Mark; Klepac, Petra

Neurodevelopment of children exposed intra-uterus by Zika virus: A case series. (2020) Peçanha, Pedro Massaroni; Gomes Junior, Saint Clair; Pone, Sheila Moura; Pone, Marcos Vinicius da Silva; Vasconcelos, Zilton; Zin, Andrea; Vilibor, Renata Hydee Hasue; Costa, Roozemeria Pereira; Meio, Maria Dalva Barbosa Baker; Nielsen-Saines, Karin; Brasil, Patricia; Brickley, Elizabeth; Lopes Moreira, Maria Elisabeth

Shedding of Yellow Fever Virus From an Imported Case in the Netherlands After Travel to Brazil. (2020) Phan, My VT; Mendonca Melo, Mariana; van Nood, Els; Aron, Georgina; Kreeft-Voermans, Jolanda JC; Koopmans, Marion PG; Reusken, Chantal; GeurtsvanKessel, Corine H; Cotten, Matthew

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The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements. (2020) Quaife, Matthew; van Zandvoort, Kevin; Gimma, Amy; Shah, Kashvi; McCreesh, Nicky; Prem, Kiesha; Barasa, Edwine; Mwanga, Daniel; Kangwana, Beth; Pinchoff, Jessie; CMMID COVID-19 Working Group; Edmunds, W John; Jarvis, Christopher I; Austrian, Karen

The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements. (2020) Quaife, Matthew; van Zandvoort, Kevin; Gimma, Amy; Shah, Kashvi; McCreesh, Nicky; Prem, Kiesha; Barasa, Edwine; Mwanga, Daniel; Kangwana, Beth; Pinchoff, Jessie; Edmunds, W John; Jarvis, Christopher I; Austrian, Karen

The effect of travel restrictions on the geographical spread of COVID-19 between large cities in China: a modelling study. (2020) Quilty, Billy J; Diamond, Charlie; Liu, Yang; Gibbs, Hamish; Russell, Timothy W; Jarvis, Christopher I; Prem, Kiesha; Pearson, Carl AB; Clifford, Samuel; Flasche, Stefan; CMMID COVID-19 working group; Klepac, Petra; Eggo, Rosalind M; Jit, Mark

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Early detection of cholera epidemics to support control in fragile states: estimation of delays and potential epidemic sizes. (2020) Ratnayake, Ruwan; Finger, Flavio; Edmunds, W John; Checchi, Francesco

Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections. (2020) Russell, Timothy W; Golding, Nick; Hellewell, Joel; Abbott, Sam; Wright, Lawrence; Pearson, Carl AB; van Zandvoort, Kevin; Jarvis, Christopher I; Gibbs, Hamish; Liu, Yang; Eggo, Rosalind M; Edmunds, W John; Kucharski, Adam J; CMMID COVID-19 working group

Postnatal symptomatic Zika virus infections in children and adolescents: A systematic review. (2020) Ramond, Anna; Lobkowicz, Ludmila; Clemente, Nuria Sanchez; Vaughan, Aisling; Turchi, Marília Dalva; Wilder-Smith, Annelies; Brickley, Elizabeth B picture_as_pdf

Behavioral Change Towards Reduced Intensity Physical Activity Is Disproportionately Prevalent Among Adults With Serious Health Issues or Self-Perception of High Risk During the UK COVID-19 Lockdown. (2020) Rogers, Nina Trivedy; Waterlow, Naomi R; Brindle, Hannah; Enria, Luisa; Eggo, Rosalind M; Lees, Shelley; Roberts, Chrissy H

Behavioural change towards reduced intensity physical activity is disproportionately prevalent among adults with serious health issues or self-perception of high risk during the UK COVID-19 lockdown. (2020) Rogers, Nina Trivedy; Waterlow, Naomi; Brindle, Hannah; Enria, Luisa; Eggo, Rosalind M; Lees, Shelley; Roberts, Chrissy H

Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections. (2020) Russell, Timothy W; Golding, Nick; Hellewell, Joel; Abbott, Sam; Wright, Lawrence; Pearson, Carl AB; Zandvoort, Kevin van; Jarvis, Christopher I; Gibbs, Hamish; Liu, Yang; Eggo, Rosalind M; Edmunds, W John; Kucharski, Adam J

Probabilistic reconstruction of measles transmission clusters from routinely collected surveillance data. (2020) Robert, Alexis; Kucharski, Adam J; Gastañaduy, Paul A; Paul, Prabasaj; Funk, Sebastian

Estimating the infection and case fatality ratio for COVID-19 using age-adjusted data from the outbreak on the Diamond Princess cruise ship. (2020) Russell, Timothy W; Hellewell, Joel; Jarvis, Christopher I; Van Zandvoort, Kevin; Abbott, Sam; Ratnayake, Ruwan; Flasche, Stefan; Eggo, Rosalind M; Edmunds, W John; Kucharski, Adam J

Investing in the health of girls and women: a best buy for sustainable development. (2020) Remme, Michelle; Vassall, Anna; Fernando, Gabriela; Bloom, David E

Highly targeted spatiotemporal interventions against cholera epidemics, 2000-19: a scoping review. (2020) Ratnayake, Ruwan; Finger, Flavio; Azman, Andrew S; Lantagne, Daniele; Funk, Sebastian; Edmunds, W John; Checchi, Francesco

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Implementation research in LMICs-evolution through innovation. (2020) Sheikh, Kabir; Hargreaves, James; Khan, Mishal; Mounier-Jack, Sandra

Can Zika Virus Infection in High Risk Pregnant Women Be Differentiated on the Basis of Symptoms? (2020) Sanchez Clemente, Nuria; Brickley, Elizabeth B; Furquim de Almeida, Marcia; Witkin, Steven S; Duarte Passos, Saulo; Jundiai Zika Cohort Group, The

Pediatric neurodevelopment by prenatal Zika virus exposure: a cross-sectional study of the Microcephaly Epidemic Research Group Cohort. (2020) Sobral da Silva, Paula Fabiana; Eickmann, Sophie Helena; Arraes de Alencar Ximenes, Ricardo; Ramos Montarroyos, Ulisses; de Carvalho Lima, Marilia; Turchi Martelli, Celina M; Velho Barreto de Araújo, Thalia; Brickley, Elizabeth B; Cunha Rodrigues, Laura; Lima da Silva Pastich Gonçalves, Fabiana Cristina; Costa Gomes Carvalho, Maria Durce; Vieira de Souza, Wayner; de Barros Miranda-Filho, Demócrito

The potential health and economic value of SARS-CoV-2 vaccination alongside physical distancing in the UK: a transmission model-based future scenario analysis and economic evaluation. (2020) Sandmann, Frank G; Davies, Nicholas G; Vassall, Anna; Edmunds, W John; Jit, Mark; Centre for the Mathematical Modelling of Infectious Diseases COV

Poor self-reported adherence to COVID-19-related quarantine/isolation requests, Norway, April to July 2020. (2020) Steens, Anneke; Freiesleben de Blasio, Birgitte; Veneti, Lamprini; Gimma, Amy; Edmunds, W John; Van Zandvoort, Kevin; Jarvis, Christopher I; Forland, Frode; Robberstad, Bjarne

The cost-effectiveness of using performance-based financing to deliver the basic package of health services in Afghanistan. (2020) Salehi, Ahmad S; Borghi, Josephine; Blanchet, Karl; Vassall, Anna

Cost of tuberculosis treatment in low- and middle-income countries: systematic review and meta-regression. (2020) Siapka, M; Vassall, A; Cunnama, L; Pineda, C; Cerecero, D; Sweeney, S; Bautista-Arredondo, S; Bollinger, L; Cameron, D; Levin, C; Gomez, GB

Zika virus infection in pregnancy and adverse fetal outcomes in São Paulo State, Brazil: a prospective cohort study. (2020) Sanchez Clemente, Nuria; Brickley, Elizabeth B; Paixão, Enny S; De Almeida, Marcia F; Gazeta, Rosa E; Vedovello, Danila; Rodrigues, Laura C; Witkin, Steven S; Passos, Saulo D

Human monkeypox - After 40 years, an unintended consequence of smallpox eradication. (2020) Simpson, Karl; Heymann, David; Brown, Colin S; Edmunds, W John; Elsgaard, Jesper; Fine, Paul; Hochrein, Hubertus; Hoff, Nicole A; Green, Andrew; Ihekweazu, Chikwe; Jones, Terry C; Lule, Swaib; Maclennan, Jane; McCollum, Andrea; Mühlemann, Barbara; Nightingale, Emily; Ogoina, Dimie; Ogunleye, Adesola; Petersen, Brett; Powell, Jacqueline; Quantick, Ollie; Rimoin, Anne W; Ulaeato, David; Wapling, Andy

Evolution of Mycobacterium tuberculosis complex lineages and their role in an emerging threat of multidrug resistant tuberculosis in Bamako, Mali. (2020) Senghore, Madikay; Diarra, Bassirou; Gehre, Florian; Otu, Jacob; Worwui, Archibald; Muhammad, Abdul Khalie; Kwambana-Adams, Brenda; Kay, Gemma L; Sanogo, Moumine; Baya, Bocar; Orsega, Susan; Doumbia, Seydou; Diallo, Souleymane; de Jong, Bouke C; Pallen, Mark J; Antonio, Martin

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Vaccine strategies to reduce the burden of pneumococcal disease in HIV-infected adults in Africa. (2020) Thindwa, Deus; Pinsent, Amy; Ojal, John; Gallagher, Katherine E; French, Neil; Flasche, Stefan

Constructing Mutants in Serotype 1 Streptococcus pneumoniae strain 519/43. (2020) Terra, Vanessa S; Plumptre, Charles D; Wall, Emma C; Brown, Jeremy S; Wren, Brendan W picture_as_pdf

The health sector cost of different policy responses to COVID-19 in low- and middle- income countries. (2020) Torres Rueda, Sergio; Sweeney, Sedona; Bozzani, Fiammetta; Vassall, Anna

Key questions for modelling COVID-19 exit strategies. (2020) Thompson, Robin N; Hollingsworth, T Déirdre; Isham, Valerie; Arribas-Bel, Daniel; Ashby, Ben; Britton, Tom; Challenor, Peter; Chappell, Lauren HK; Clapham, Hannah; Cunniffe, Nik J; Dawid, A Philip; Donnelly, Christl A; Eggo, Rosalind M; Funk, Sebastian; Gilbert, Nigel; Glendinning, Paul; Gog, Julia R; Hart, William S; Heesterbeek, Hans; House, Thomas; Keeling, Matt; Kiss, István Z; Kretzschmar, Mirjam E; Lloyd, Alun L; McBryde, Emma S; McCaw, James M; McKinley, Trevelyan J; Miller, Joel C; Morris, Martina; O'Neill, Philip D; Parag, Kris V; Pearson, Carl AB; Pellis, Lorenzo; Pulliam, Juliet RC; Ross, Joshua V; Tomba, Gianpaolo Scalia; Silverman, Bernard W; Struchiner, Claudio J; Tildesley, Michael J; Trapman, Pieter; Webb, Cerian R; Mollison, Denis; Restif, Olivier

What will it cost to prevent violence against women and girls in low- and middle-income countries? Evidence from Ghana, Kenya, Pakistan, Rwanda, South Africa and Zambia. (2020) Torres-Rueda, Sergio; Ferrari, Giulia; Orangi, Stacey; Hitimana, Regis; Daviaud, Emmanuelle; Tawiah, Theresa; Prah, Rebecca Kyerewaa Dwommoh; Karmaliani, Rozina; Kapapa, Eleonah; Barasa, Edwine; Jewkes, Rachel; Vassall, Anna

Incidence of and Factors Associated With Leprosy Among Household Contacts of Patients With Leprosy in Brazil. (2020) Teixeira, Camila Silveira Silva; Pescarini, Júlia Moreira; Alves, Flávia Jôse Oliveira; Nery, Joilda Silva; Sanchez, Mauro Niskier; Teles, Carlos; Ichihara, Maria Yury Travassos; Ramond, Anna; Smeeth, Liam; Fernandes Penna, Maria Lucia; Rodrigues, Laura Cunha; Brickley, Elizabeth B; Penna, Gerson Oliveira; Barreto, Maurício Lima; Silva, Rita de Cássia Ribeiro

When, Who, and How to Sample: Designing Practical Surveillance for 7 Neglected Tropical Diseases as We Approach Elimination. (2020) Toor, Jaspreet; Coffeng, Luc E; Hamley, Jonathan ID; Fronterre, Claudio; Prada, Joaquin M; Castaño, M Soledad; Davis, Emma L; Godwin, William; Vasconcelos, Andreia; Medley, Graham F; Hollingsworth, T Déirdre

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Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors. (2020) Uyoga, Sophie; Adetifa, Ifedayo MO; Karanja, Henry K; Nyagwange, James; Tuju, James; Wanjiku, Perpetual; Aman, Rashid; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Ng'ang'a, Wangari; Rombo, Charles; Yegon, Christine; Kithi, Khamisi; Odhiambo, Elizabeth; Rotich, Thomas; Orgut, Irene; Kihara, Sammy; Otiende, Mark; Bottomley, Christian; Mupe, Zonia N; Kagucia, Eunice W; Gallagher, Katherine E; Etyang, Anthony; Voller, Shirine; Gitonga, John N; Mugo, Daisy; Agoti, Charles N; Otieno, Edward; Ndwiga, Leonard; Lambe, Teresa; Wright, Daniel; Barasa, Edwine; Tsofa, Benjamin; Bejon, Philip; Ochola-Oyier, Lynette I; Agweyu, Ambrose; Scott, J Anthony G; Warimwe, George M

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Endocrine Dysfunction in Children with Zika-Related Microcephaly Who Were Born during the 2015 Epidemic in the State of Pernambuco, Brazil. (2020) Veras Gonçalves, Andréia; Miranda-Filho, Demócrito de B; Rocha Vilela, Líbia Cristina; Ramos, Regina Coeli Ferreira; de Araújo, Thalia VB; de Vasconcelos, Rômulo AL; Wanderley Rocha, Maria Angela; Eickmann, Sophie Helena; Cordeiro, Marli Tenório; de Oliveira Ventura, Maria Liana Vieira; Montarroyos, Ulisses Ramos; Mertens Brainer, Alessandra; Costa Gomes, Maria Durce; da Silva, Paula Fabiana Sobral; Martelli, Celina MT; Brickley, Elizabeth B; Ximenes, Ricardo AA

Time use and social mixing during and around festive periods: Potential changes in the age distribution of COVID-19 cases from increased intergenerational interactions. (2020) van Leeuwen, Edwin; Sandmann, Frank G; Eggo, Rosalind M; White, Peter J

Integrating economic and health evidence to inform Covid-19 policy in low- and middle- income countries. (2020) Vassall, Anna; Sweeney, Sedona; Barasa, Edwine; Prinja, Shankar; Keogh-Brown, Marcus R; Tarp Jensen, Henning; Smith, Richard; Baltussen, Rob; M Eggo, Rosalind; Jit, Mark

A Test-Negative Design with Additional Population Controls Can Be Used to Rapidly Study Causes of the SARS-CoV-2 Epidemic. (2020) Vandenbroucke, Jan P; Brickley, Elizabeth B; Vandenbroucke-Grauls, Christina MJE; Pearce, Neil

Response strategies for COVID-19 epidemics in African settings: a mathematical modelling study. (2020) van Zandvoort, Kevin; Jarvis, Christopher I; Pearson, Carl AB; Davies, Nicholas G; CMMID COVID-19 working group; Ratnayake, Ruwan; Russell, Timothy W; Kucharski, Adam J; Jit, Mark; Flasche, Stefan; Eggo, Rosalind M; Checchi, Francesco

Susceptibility to SARS-CoV-2 Infection Among Children and Adolescents Compared With Adults: A Systematic Review and Meta-analysis. (2020) Viner, Russell M; Mytton, Oliver T; Bonell, Chris; Melendez-Torres, GJ; Ward, Joseph; Hudson, Lee; Waddington, Claire; Thomas, James; Russell, Simon; van der Klis, Fiona; Koirala, Archana; Ladhani, Shamez; Panovska-Griffiths, Jasmina; Davies, Nicholas G; Booy, Robert; Eggo, Rosalind M

Evaluation of Glycosylated FlpA and SodB as Subunit Vaccines Against Campylobacter jejuni Colonisation in Chickens. (2020) Vohra, Prerna; Chintoan-Uta, Cosmin; Terra, Vanessa S; Bremner, Abi; Cuccui, Jon; Wren, Brendan W; Vervelde, Lonneke; Stevens, Mark P

W

CSF Levels of Elongation Factor Tu Is Associated With Increased Mortality in Malawian Adults With Streptococcus pneumoniae Meningitis. (2020) Wall, Emma C; Brownridge, Philip; Laing, Gavin; Terra, Vanessa S; Mlozowa, Veronica; Denis, Brigitte; Nyirenda, Mulinda; Allain, Theresa; Ramos-Sevillano, Elisa; Carrol, Enitan; Collins, Andrea; Gordon, Stephen B; Lalloo, David G; Wren, Brendan; Beynon, Robert; Heyderman, Robert S; Brown, Jeremy S

Study protocol: Comparison of different risk prediction modelling approaches for COVID-19 related death using the OpenSAFELY platform. (2020) Williamson, Elizabeth J; Tazare, John; Bhaskaran, Krishnan; Walker, Alex J; McDonald, Helen I; Tomlinson, Laurie A; Bacon, Sebastian; Bates, Chris; Curtis, Helen J; Forbes, Harriet; Minassian, Caroline; Morton, Caroline E; Nightingale, Emily; Mehrkar, Amir; Evans, Dave; Nicholson, Brian D; Leon, David; Inglesby, Peter; MacKenna, Brian; Cockburn, Jonathan; Davies, Nicholas G; Hulme, Will J; Morley, Jessica; Douglas, Ian J; Rentsch, Christopher T; Mathur, Rohini; Wong, Angel; Schultze, Anna; Croker, Richard; Parry, John; Hester, Frank; Harper, Sam; Perera, Rafael; Grieve, Richard; Harrison, David; Steyerberg, Ewout; Eggo, Rosalind M; Diaz-Ordaz, Karla; Keogh, Ruth; Evans, Stephen JW; Smeeth, Liam; Goldacre, Ben

Revisiting aminocoumarins for the treatment of melioidosis. (2020) Willcocks, SJ; Cia, F; Francisco, AF; Wren, BW

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Impact of routine vaccination against Haemophilus influenzae type b in The Gambia: 20 years after its introduction. (2020) Zaman, Syed Ma; Howie, Stephen Rc; Ochoge, Magnus; Secka, Ousman; Bah, Alasana; Baldeh, Ignatius; Sanneh, Bakary; Darboe, Saffiatou; Ceesay, Buntung; Camara, Haddy Bah; Mawas, Fatme; Ndiaye, Malick; Hossain, Ilias; Salaudeen, Rasheed; Bojang, Kalifa; Ceesay, Samba; Sowe, Dawda; Hossain, M Jahangir; Mulholland, Kim; Kwambana-Adams, Brenda A; Okoi, Catherine; Badjie, Siaka; Ceesay, Lamin; Mwenda, Jason M; Cohen, Adam L; Agocs, Mary; Mihigo, Richard; Bottomley, Christian; Antonio, Martin; Mackenzie, Grant A