Items where Research Centre is "Centre for the Mathematical Modelling of Infectious Diseases"
Research Centres (26996)
Centre for the Mathematical Modelling of Infectious Diseases (1222)
Number of items: 106.
A
Implementing Germ Defence digital behaviour change intervention via all primary care practices in England to reduce respiratory infections during the COVID-19 pandemic: an efficient cluster randomised controlled trial using the OpenSAFELY platform. (2023)
Ainsworth, Ben; Horwood, Jeremy; Walter, Scott R; Miller, Sascha; Chalder, Melanie; De Vocht, Frank; Denison-Day, James; Elwenspoek, Martha MC; Curtis, Helen J; Bates, Chris; Mehrkar, Amir; Bacon, Seb; Goldacre, Ben; OpenSAFELY Collaborative; Craggs, Pippa; Amlôt, Richard; Francis, Nick; Little, Paul; Macleod, John; Moore, Michael; Morton, Kate; Rice, Cathy; Sterne, Jonathan; Stuart, Beth; Towler, Lauren; Willcox, Merlin L; Yardley, Lucy
Guiding pragmatic treatment choices for rifampicin-resistant tuberculosis in the absence of second-line drug susceptibility testing. (2023)
Achar, Jay; Seddon, James A; Knight, Gwenan M; Dodd, Peter J; Esmail, Hanif; Hughes, Jennifer; McQuaid, C Finn
Health effects of routine measles vaccination and supplementary immunisation activities in 14 high-burden countries: a Dynamic Measles Immunization Calculation Engine (DynaMICE) modelling study. (2023)
Auzenbergs, Megan; Fu, Han; Abbas, Kaja; Procter, Simon R; Cutts, Felicity T; Jit, Mark
Repurposing an integrated national influenza platform for genomic surveillance of SARS-CoV-2 in Ghana: a molecular epidemiological analysis. (2023)
Asante, Ivy Asantewaa; Hsu, Sharon Nienyun; Boatemaa, Linda; Kwasah, Lorreta; Adusei-Poku, Mildred; Odoom, John Kofi; Awuku-Larbi, Yaw; Foulkes, Benjamin H; Oliver-Commey, Joseph; Asiedu, Ernest Konadu; Parker, Matthew D; Mitja, Oriol; Eggo, Rosalind M; de Oliveira-Martins, Leonardo; Asiedu-Bekoe, Franklin; Laryea, Dennis Odai; Kuma-Aboagye, Patrick; Marks, Michael; de Silva, Thushan I; Ampofo, William Kwabena
Vaccination of Older Adults Against Respiratory Syncytial Virus: The Final Pieces of the Puzzle. (2023)
Atkins, Katherine E; Hodgson, David
A phylogenetic study of dengue virus in urban Vietnam shows long-term persistence of endemic strains. (2023)
Ashall, James; Shah, Sonal; Biggs, Joseph R; Chang, Jui-Ning R; Jafari, Yalda; Brady, Oliver J; Mai, Huynh Kim; Lien, Le Thuy; Do Thai, Hung; Nguyen, Hien Anh Thi; Anh, Dang Duc; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Yoshida, Lay-Myint; Hafalla, Julius Clemence R; Hue, Stephane; Hibberd, Martin L
Streptococcus pyogenes carriage acquisition, persistence and transmission dynamics within households in The Gambia (SpyCATS): protocol for a longitudinal household cohort study. (2023)
Armitage, Edwin P; Keeley, Alex J; de Crombrugghe, Gabrielle; Senghore, Elina; Camara, Fatoumatta E; Jammeh, Musukoi; Bittaye, Amat; Ceesay, Haddy; Ceesay, Isatou; Samateh, Bunja; Manneh, Muhammed; Sesay, Abdul Karim; Kampmann, Beate; Kucharski, Adam; de Silva, Thushan I; Marks, Michael
B
Supply-side factors influencing demand for facility-based delivery in Tanzania: a multilevel analysis. (2023)
Binyaruka, Peter; Foss, Anna; Alibrahim, Abdullah; Mziray, Nicholaus; Cassidy, Rachel; Borghi, Josephine
"We usually see a lot of delay in terms of coming for or seeking care": an expert consultation on COVID testing and care pathways in seven low- and middle-income countries. (2023)
Bonnet, Gabrielle; Bimba, John; Chavula, Chancy; Chifamba, Harunavamwe N; Divala, Titus; Lescano, Andres G; Majam, Mohammed; Mbo, Danjuma; Suwantika, Auliya A; Tovar, Marco A; Yadav, Pragya; Corbett, Elisabeth L; Vassall, Anna; Jit, Mark
Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany. (2023)
Brockhaus, Elisabeth K; Wolffram, Daniel; Stadler, Tanja; Osthege, Michael; Mitra, Tanmay; Littek, Jonas M; Krymova, Ekaterina; Klesen, Anna J; Huisman, Jana S; Heyder, Stefan; Helleckes, Laura M; An der Heiden, Matthias; Funk, Sebastian; Abbott, Sam; Bracher, Johannes
A Scoping Review and Taxonomy of Epidemiological-Macroeconomic Models of COVID-19. (2023)
Bonnet, Gabrielle; Pearson, Carl AB; Torres-Rueda, Sergio; Ruiz, Francis; Lines, Jo; Jit, Mark; Vassall, Anna; Sweeney, Sedona
Seasonality of acute kidney injury phenotypes in England: an unsupervised machine learning classification study of electronic health records. (2023)
Bolt, Hikaru; Suffel, Anne; Matthewman, Julian; Sandmann, Frank; Tomlinson, Laurie; Eggo, Rosalind
COVID-19 risk mitigation in reopening mass cultural events: population-based observational study for the UK Events Research Programme in Liverpool City Region. (2023)
Burnside, Girvan; Cheyne, Christopher P; Leeming, Gary; Humann, Michael; Darby, Alistair; Green, Mark A; Crozier, Alexander; Maskell, Simon; O'Halloran, Kay; Musi, Elena; Carmi, Elinor; Khan, Naila; Fisher, Debra; Corcoran, Rhiannon; Dunning, Jake; Edmunds, W John; Tharmaratnam, Kukatharmini; Hughes, David M; Malki-Epshtein, Liora; Cook, Malcolm; Roberts, Ben M; Gallagher, Eileen; Howell, Kate; Chand, Meera; Kemp, Robin; Boulter, Matthew; Fowler, Tom; Semple, Malcolm G; Coffey, Emer; Ashton, Matt; COVID-19 Genomics UK (COG-UK) Consortium; García-Fiñana, Marta; Buchan, Iain E
Cost-effectiveness of tuberculosis infection prevention and control interventions in South African clinics: a model-based economic evaluation informed by complexity science methods. (2023)
Bozzani, Fiammetta Maria; McCreesh, Nicky; Diaconu, Karin; Govender, Indira; White, Richard G; Kielmann, Karina; Grant, Alison D; Vassall, Anna
Relaxation of anti-COVID-19 measures reveals new challenges for infectious disease outbreak forecasting. (2023)
Brady, Oliver J; Hofmann, Barbara; Colón-González, Felipe J; Gibb, Rory; Lowe, Rachel; Tsarouchi, Gina; Harpham, Quillon; Lumbroso, Darren; Lan, Phan Trong; Nam, Vu Sinh
Inferring the multiplicity of founder variants initiating HIV-1 infection: a systematic review and individual patient data meta-analysis. (2023)
Baxter, James; Langhorne, Sarah; Shi, Ting; Tully, Damien C; Villabona-Arenas, Ch Julián; Hué, Stéphane; Albert, Jan; Leigh Brown, Andrew; Atkins, Katherine E
Potential benefit of extended dose schedules of human papillomavirus vaccination in the context of scarce resources and COVID-19 disruptions in low-income and middle-income countries: a mathematical modelling analysis. (2023)
Bénard, Élodie; Drolet, Mélanie; Laprise, Jean-François; Jit, Mark; Prem, Kiesha; Boily, Marie-Claude; Brisson, Marc
Is there a role for RDTs as we live with COVID-19? An assessment of different strategies. (2023)
Bonnet, Gabrielle; Vassall, Anna; Jit, Mark
C
The full health, economic, and social benefits of prospective Strep A vaccination. (2023)
Cadarette, Daniel; Ferranna, Maddalena; Cannon, Jeffrey W; Abbas, Kaja; Giannini, Fiona; Zucker, Leo; Bloom, David E
The burden and dynamics of hospital-acquired SARS-CoV-2 in England. (2023)
Cooper, Ben S; Evans, Stephanie; Jafari, Yalda; Pham, Thi Mui; Mo, Yin; Lim, Cherry; Pritchard, Mark G; Pople, Diane; Hall, Victoria; Stimson, James; Eyre, David W; Read, Jonathan M; Donnelly, Christl A; Horby, Peter; Watson, Conall; Funk, Sebastian; Robotham, Julie V; Knight, Gwenan M
Projecting the future incidence and burden of dengue in Southeast Asia. (2023)
Colón-González, Felipe J; Gibb, Rory; Khan, Kamran; Watts, Alexander; Lowe, Rachel; Brady, Oliver J
New tuberculosis vaccines in India: modelling the potential health and economic impacts of adolescent/adult vaccination with M72/AS01E and BCG-revaccination. (2023)
Clark, Rebecca A; Weerasuriya, Chathika K; Portnoy, Allison; Mukandavire, Christinah; Quaife, Matthew; Bakker, Roel; Scarponi, Danny; Harris, Rebecca C; Rade, Kirankumar; Mattoo, Sanjay Kumar; Tumu, Dheeraj; Menzies, Nicolas A; White, Richard G
Ethnic differences in the indirect effects of the COVID-19 pandemic on clinical monitoring and hospitalisations for non-COVID conditions in England: a population-based, observational cohort study using the OpenSAFELY platform. (2023)
Costello, Ruth E; Tazare, John; Piehlmaier, Dominik; Herrett, Emily; Parker, Edward PK; Zheng, Bang; Mansfield, Kathryn E; Henderson, Alasdair D; Carreira, Helena; Bidulka, Patrick; Wong, Angel YS; Warren-Gash, Charlotte; Hayes, Joseph F; Quint, Jennifer K; MacKenna, Brian; Mehrkar, Amir; Eggo, Rosalind M; Katikireddi, Srinivasa Vittal; Tomlinson, Laurie; Langan, Sinéad M; Mathur, Rohini; LH&W NCS (or CONVALESCENCE) Collaborative; OpenSAFELY collaborative
The impact of alternative delivery strategies for novel tuberculosis vaccines in low-income and middle-income countries: a modelling study. (2023)
Clark, Rebecca A; Mukandavire, Christinah; Portnoy, Allison; Weerasuriya, Chathika K; Deol, Arminder; Scarponi, Danny; Iskauskas, Andrew; Bakker, Roel; Quaife, Matthew; Malhotra, Shelly; Gebreselassie, Nebiat; Zignol, Matteo; Hutubessy, Raymond CW; Giersing, Birgitte; Jit, Mark; Harris, Rebecca C; Menzies, Nicolas A; White, Richard G
Effectiveness of BNT162b2 and ChAdOx1 against SARS-CoV-2 household transmission: a prospective cohort study in England. (2023)
Clifford, Samuel; Waight, Pauline; Hackman, Jada; Hué, Stephane; Gower, Charlotte M; Kirsebom, Freja CM; Skarnes, Catriona; Letley, Louise; Lopez Bernal, Jamie; Andrews, Nick; Flasche, Stefan; Miller, Elizabeth
Association between living with children, vaccination, and outcomes from COVID-19: an OpenSAFELY cohort study of 12 million adults in England during 2021–22. (2023)
Cowling, Thomas E; Forbes, Harriet; Wing, Kevin; Tazare, John; Schultze, Anna; Morton, Caroline E; Bacon, Sebastian; MacKenna, Brian; Walker, Alex J; Hulme, Will; Bates, Chris; Mehrkar, Amir; Curtis, Helen J; Evans, David; Inglesby, Peter; Davy, Simon; Cockburn, Jonathan; Parry, John; Hester, Frank; Harper, Sam; Douglas, Ian J; Evans, Stephen JW; Bhaskaran, Krishnan; Williamson, Elizabeth J; Eggo, Rosalind M; Goldacre, Ben; Tomlinson, Laurie A
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A modelling analysis of a new multi-stage pathway for classifying achievement of public health milestones for leprosy. (2023)
Davis, Emma L; Crump, Ron E; Medley, Graham F; Solomon, Anthony W; Pemmaraju, Venkata Ranganadha Rao; Hollingsworth, T Déirdre
Estimating health care costs at scale in low- and middle-income countries: Mathematical notations and frameworks for the application of cost functions. (2023)
d'Elbée, Marc; Terris-Prestholt, Fern; Briggs, Andrew; Griffiths, Ulla Kou; Larmarange, Joseph; Medley, Graham Francis; Gomez, Gabriella Beatriz
Influenza vaccine uptake among children and older adults in China: a secondary analysis of a quasi-experimental study. (2023)
Du, Yumeng; Jin, Chenqi; Jit, Mark; Chantler, Tracey; Lin, Leesa; Larson, Heidi J; Li, Jing; Gong, Wenfeng; Yang, Fan; Ren, Nina; Cheng, Weibin; Zhou, Yi; Tang, Weiming; Tucker, Joseph D; Wu, Dan
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The role of global reanalyses in climate services for health: Insights from the <i>Lancet</i> Countdown. (2023)
Di Napoli, Claudia; Romanello, Marina; Minor, Kelton; Chambers, Jonathan; Dasgupta, Shouro; Escobar, Luis E; Hang, Yun; Hänninen, Risto; Liu, Yang; Lotto Batista, Martin; Lowe, Rachel; Murray, Kris A; Owfi, Fereidoon; Rabbaniha, Mahnaz; Shi, Liuhua; Sofiev, Mikhail; Tabatabaei, Meisam; Robinson, Elizabeth JZ
E
Estimating the contribution of subclinical tuberculosis disease to transmission: An individual patient data analysis from prevalence surveys. (2023)
Emery, Jon C; Dodd, Peter J; Banu, Sayera; Frascella, Beatrice; Garden, Frances L; Horton, Katherine C; Hossain, Shahed; Law, Irwin; van Leth, Frank; Marks, Guy B; Nguyen, Hoa Binh; Nguyen, Hai Viet; Onozaki, Ikushi; Quelapio, Maria Imelda D; Richards, Alexandra S; Shaikh, Nabila; Tiemersma, Edine W; White, Richard G; Zaman, Khalequ; Cobelens, Frank; Houben, Rein MGJ
AHHME: A model for estimating the holistic cost-effectiveness of antimicrobial resistance interventions in food animal production. (2023)
Emes, Eve T; Waage, Jeff; Knight, Gwenan M; Naylor, Nichola R
Drivers of Antibiotic Use in Semi-Intensive Poultry Farms: Evidence from a Survey in Senegal. (2023)
Emes, Eve; Faye, Adiouma; Naylor, Nichola; Belay, Dagim; Ngom, Babacar; Fall, Awa Gueye; Knight, Gwen; Dione, Michel
F
Why local antibiotic resistance data matters - Informing empiric prescribing through local data collation, app design and engagement in Zambia. (2023)
Fwoloshi, Sombo; Chola, Uchizi; Nakazwe, Ruth; Tatila, Timothy; Mateele, Tebuho; Kabaso, Mwewa; Muzyamba, Theresa; Mutwale, Ilunga; Jones, Anja St Clair; Islam, Jasmin; Chikatula, Enock; Mweemba, Aggrey; Mbewe, Wilson; Mulenga, Lloyd; Aiken, Alexander M; Anitha Menon, J; Bailey, Sarah Lou; Knight, Gwenan M
Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets. (2023)
Fyles, Martyn; Vihta, Karina-Doris; Sudre, Carole H; Long, Harry; Das, Rajenki; Jay, Caroline; Wingfield, Tom; Cumming, Fergus; Green, William; Hadjipantelis, Pantelis; Kirk, Joni; Steves, Claire J; Ourselin, Sebastien; Medley, Graham F; Fearon, Elizabeth; House, Thomas
Vaccine value profile for Chikungunya. (2023)
Flandes, Ximena; Hansen, Clairissa A; Palani, Sunil; Abbas, Kaja; Bennett, Cate; Caro, William Perea; Hutubessy, Raymond; Khazhidinov, Kanat; Lambach, Philipp; Maure, Clara; Marshall, Caroline; Rojas, Diana P; Rosewell, Alexander; Sahastrabuddhe, Sushant; Tufet, Marta; Wilder-Smith, Annelies; Beasley, David WC; Bourne, Nigel; Barrett, Alan DT
Impact and cost-effectiveness of measles vaccination through microarray patches in 70 low-income and middle-income countries: mathematical modelling and early-stage economic evaluation. (2023)
Fu, Han; Abbas, Kaja; Malvolti, Stefano; Gregory, Christopher; Ko, Melissa; Amorij, Jean-Pierre; Jit, Mark
Evaluating the equity impact and cost-effectiveness of digital adherence technologies with differentiated care to support tuberculosis treatment adherence in Ethiopia: protocol and analysis plan for the health economics component of a cluster randomised trial. (2023)
Foster, Nicola; Tadesse, Amare W; McQuaid, Christopher Finn; Gosce, Lara; Abdurhman, Tofik; Assefa, Demelash; Bedru, Ahmed; Houben, Rein MGJ; van Kalmthout, Kristian; Letta, Taye; Mohammed, Zemedu; van Rest, Job; Umeta, Demekech G; Weldemichael, Gedion T; Yazew, Hiwot; Jerene, Degu; Quaife, Matthew; Fielding, Katherine L
G
Interactions between climate change, urban infrastructure and mobility are driving dengue emergence in Vietnam. (2023)
Gibb, Rory; Colón-González, Felipe J; Lan, Phan Trong; Huong, Phan Thi; Nam, Vu Sinh; Duoc, Vu Trong; Hung, Do Thai; Dong, Nguyễn Thanh; Chien, Vien Chinh; Trang, Ly Thi Thuy; Kien Quoc, Do; Hoa, Tran Minh; Tai, Nguyen Hữu; Hang, Tran Thi; Tsarouchi, Gina; Ainscoe, Eleanor; Harpham, Quillon; Hofmann, Barbara; Lumbroso, Darren; Brady, Oliver J; Lowe, Rachel
Modeling the potential health impact of prospective Strep A vaccines. (2023)
Giannini, Fiona; Cannon, Jeffrey W; Cadarette, Daniel; Bloom, David E; Moore, Hannah C; Carapetis, Jonathan; Abbas, Kaja
Infectious Disease Modelling of HIV Prevention Interventions: A Systematic Review and Narrative Synthesis of Compartmental Models. (2023)
Giddings, Rebecca; Indravudh, Pitchaya; Medley, Graham F; Bozzani, Fiammetta; Gafos, Mitzy; Malhotra, Shelly; Terris-Prestholt, Fern; Torres-Rueda, Sergio; Quaife, Matthew
Cost-effectiveness of monoclonal antibody and maternal immunization against respiratory syncytial virus (RSV) in infants: Evaluation for six European countries. (2023)
Getaneh, Abraham M; Li, Xiao; Mao, Zhuxin; Johannesen, Caroline K; Barbieri, Elisa; van Summeren, Jojanneke; Wang, Xin; Tong, Sabine; Baraldi, Eugenio; Phijffer, Emily; Rizzo, Caterina; van Wijhe, Maarten; Heikkinen, Terho; Bont, Louis; Willem, Lander; Jit, Mark; Beutels, Philippe; Bilcke, Joke; for Respiratory Syncytial Virus Consortium in Europe (RESCEU) in
Contribution of remote M.tuberculosis infection to tuberculosis disease: A 30-year population study. (2023)
Glynn, Judith R; Khan, Palwasha; Mzembe, Themba; Sichali, Lifted; Fine, Paul EM; Crampin, Amelia C; Houben, Rein MGJ
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Application of pathogen genomics to infer the transmission direction of respiratory infection. (2023)
Hackman, JN
Assessing the impact of the 2018 Changchun Changsheng vaccine incident on childhood vaccination in China. (2023)
Hou, Zhiyuan; Lai, Xiaozhen; Liu, Yang; Jit, Mark; Larson, Heidi J; Fang, Hai
Protocol for an OpenSAFELY cohort study collecting patient-reported outcome measures using the TPP Airmid smartphone application and linked big data to quantify the health and economic costs of long COVID (OpenPROMPT). (2023)
Herrett, Emily; Tomlin, Keith; Lin, Liang-Yu; Tomlinson, Laurie A; Jit, Mark; Briggs, Andrew; Marks, Michael; Sandmann, Frank; Parry, John; Bates, Christopher; Morley, Jessica; Bacon, Seb; Butler-Cole, Benjamin; Mahalingasivam, Viyaasan; Dennison, Alan; Smith, Deb; Gabriel, Ethan; Mehrkar, Amir; Goldacre, Ben; Smeeth, Liam; Eggo, Rosalind MM
First dose COVID-19 vaccine coverage amongst adolescents and children in England: an analysis of 3.21 million patients' primary care records in situ using OpenSAFELY. (2023)
Hopcroft, Lisa E; Curtis, Helen J; Brown, Andrew D; Hulme, William J; Andrews, Colm D; Morton, Caroline E; Inglesby, Peter; Morley, Jessica; Mehrkar, Amir; Bacon, Sebastian C; Eggo, Rosalind M; Mahalingasivam, Viyaasan; Parker, Edward PK; Tomlinson, Laurie A; Bates, Christopher; Cockburn, Jonathan; Parry, John; Hester, Frank; Harper, Sam; Goldacre, Ben; Walker, Alex J; MacKenna, Brian
Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study. (2023)
Hackman, Jada; Sheppard, Carmen; Phelan, Jody; Jones-Warner, William; Sobkowiak, Ben; Shah, Sonal; Litt, David; Fry, Norman K; Toizumi, Michiko; Yoshida, Lay-Myint; Hibberd, Martin; Miller, Elizabeth; Flasche, Stefan; Hué, Stéphane
K
Associations of water, sanitation, and hygiene with typhoid fever in case-control studies: a systematic review and meta-analysis. (2023)
Kim, Chaelin; Goucher, Gerard R; Tadesse, Birkneh Tilahun; Lee, Woojoo; Abbas, Kaja; Kim, Jong-Hoon
Global and regional burden of attributable and associated bacterial antimicrobial resistance avertable by vaccination: modelling study. (2023)
Kim, Chaelin; Holm, Marianne; Frost, Isabel; Hasso-Agopsowicz, Mateusz; Abbas, Kaja
Estimating the cost-effectiveness of maternal vaccination and monoclonal antibodies for respiratory syncytial virus in Kenya and South Africa. (2023)
Koltai, Mihaly; Moyes, Jocelyn; Nyawanda, Bryan; Nyiro, Joyce; Munywoki, Patrick K; Tempia, Stefano; Li, Xiao; Antillon, Marina; Bilcke, Joke; Flasche, Stefan; Beutels, Philippe; Nokes, D James; Cohen, Cheryl; Jit, Mark
RESIST2: RESIST2 Workshop. (2023)
Knight, Gwen
Genomic epidemiology of SARS-CoV-2 infections in The Gambia: an analysis of routinely collected surveillance data between March, 2020, and January, 2022. (2023)
Kanteh, Abdoulie; Jallow, Haruna S; Manneh, Jarra; Sanyang, Bakary; Kujabi, Mariama A; Ndure, Sainabou Laye; Jarju, Sheikh; Sey, Alhagie Papa; Damilare K, Dabiri; Bah, Yaya; Sambou, Sana; Jarju, Gibril; Manjang, Buba; Jagne, Abubacarr; Bittaye, Sheikh Omar; Bittaye, Mustapha; Forrest, Karen; Tiruneh, Desta Alamerew; Samateh, Ahmadou Lamin; Jagne, Sheriffo; Hué, Stéphane; Mohammed, Nuredin; Amambua-Ngwa, Alfred; Kampmann, Beate; D'Alessandro, Umberto; de Silva, Thushan I; Roca, Anna; Sesay, Abdul Karim
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A systematic review of the data, methods and environmental covariates used to map Aedes-borne arbovirus transmission risk. (2023)
Lim, Ah-Young; Jafari, Yalda; Caldwell, Jamie M; Clapham, Hannah E; Gaythorpe, Katy AM; Hussain-Alkhateeb, Laith; Johansson, Michael A; Kraemer, Moritz UG; Maude, Richard J; McCormack, Clare P; Messina, Jane P; Mordecai, Erin A; Rabe, Ingrid B; Reiner, Robert C; Ryan, Sadie J; Salje, Henrik; Semenza, Jan C; Rojas, Diana P; Brady, Oliver J
Transplacental transfer efficiency of maternal antibodies against influenza A(H1N1)pdm09 virus and dynamics of naturally acquired antibodies in Chinese children: a longitudinal, paired mother-neonate cohort study. (2023)
Li, Mei; Wang, Wei; Chen, Junbo; Zhan, Zhifei; Xu, Meng; Liu, Nuolan; Ren, Lingshuang; You, Lei; Zheng, Wen; Shi, Huilin; Zhao, Zeyao; Huang, Chaoyang; Chen, Xinhua; Zheng, Nan; Lu, Wanying; Zhou, Xiaoyu; Zhou, Jiaxin; Liao, Qiaohong; Yang, Juan; Jit, Mark; Salje, Henrik; Yu, Hongjie
The potential global cost-effectiveness of prospective Strep A vaccines and associated implementation efforts. (2023)
Lee, Jung-Seok; Mogasale, Vittal; Kim, Sol; Cannon, Jeffrey; Giannini, Fiona; Abbas, Kaja; Excler, Jean-Louis; Kim, Jerome H
Quantifying patient- and hospital-level antimicrobial resistance dynamics in Staphylococcus aureus from routinely collected data. (2023)
Leclerc, Quentin; Clements, Alastair; Dunn, Helen; Hatcher, James; Lindsay, Jodi A; Grandjean, Louis; Knight, Gwenan M
Estimating global and regional between-country inequality in routine childhood vaccine coverage in 195 countries and territories from 2019 to 2021: a longitudinal study. (2023)
Lai, Xiaozhen; Zhang, Haijun; Pouwels, Koen B; Patenaude, Bryan; Jit, Mark; Fang, Hai
Towards a leptospirosis early warning system in northeastern Argentina. (2023)
Lotto Batista, Martín; Rees, Eleanor M; Gómez, Andrea; López, Soledad; Castell, Stefanie; Kucharski, Adam J; Ghozzi, Stéphane; Müller, Gabriela V; Lowe, Rachel
Assessing the impacts of COVID-19 vaccination programme's timing and speed on health benefits, cost-effectiveness, and relative affordability in 27 African countries. (2023)
Liu, Yang; Procter, Simon R; Pearson, Carl AB; Montero, Andrés Madriz; Torres-Rueda, Sergio; Asfaw, Elias; Uzochukwu, Benjamin; Drake, Tom; Bergren, Eleanor; Eggo, Rosalind M; Ruiz, Francis; Ndembi, Nicaise; Nonvignon, Justice; Jit, Mark; Vassall, Anna
Emergent variant modeling of the serological repertoire to norovirus in young children. (2023)
Lindesmith, Lisa C; Brewer-Jensen, Paul D; Conrad, Helen; O'Reilly, Kathleen M; Mallory, Michael L; Kelly, Daniel; Williams, Rachel; Edmunds, W John; Allen, David J; Breuer, Judith; Baric, Ralph S
The effectiveness of pay-it-forward in addressing HPV vaccine delay and increasing uptake among 15-18-year-old adolescent girls compared to user-paid vaccination: a study protocol for a two-arm randomized controlled trial in China. (2023)
Li, Yifan; Qin, Chuanyu; Qiu, Shengyue; He, Yu; Pang, Linchuan; Xu, Xiaolan; Yim, Vivian Wan-Cheong; Tang, Shenglan; Du, Heng; Gong, Wenfeng; Yang, Fan; Tucker, Joseph D; Tang, Weiming; Wang, Yun; Lin, Leesa; Jit, Mark; Song, Wei; Li, Chunrong; Smith, Jennifer; Li, Jing; Wu, Dan
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Malnutrition in older adults: a wider view. (2023)
McQuaid, Christopher Finn; Bhargava, Madhavi; Sinha, Pranay; Bhargava, Anurag; Houben, Rein MGJ
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The 2023 UN high-level meeting on tuberculosis: renewing hope, momentum, and commitment to end tuberculosis. (2023)
Millington, Kerry A; White, Richard G; Lipman, Marc; McQuaid, C Finn; Hauser, Janika; Wooding, Vincent; Potter, Jessica; Abubakar, Ibrahim; Wingfield, Tom
Comparison of collection methods for Phlebotomus argentipes sand flies to use in a molecular xenomonitoring system for the surveillance of visceral leishmaniasis. (2023)
McIntyre-Nolan, Shannon; Kumar, Vijay; Mark-Carew, Miguella; Kumar, Kundan; Nightingale, Emily S; Dalla Libera Marchiori, Giorgia; Rogers, Matthew E; Kristan, Mojca; Campino, Susana; Medley, Graham F; Das, Pradeep; Cameron, Mary M
Accumulation of Immunity in Heavy-Tailed Sexual Contact Networks Shapes Mpox Outbreak Sizes. (2023)
Murayama, Hiroaki; Pearson, Carl AB; Abbott, Sam; Miura, Fuminari; Jung, Sung-Mok; Fearon, Elizabeth; Funk, Sebastian; Endo, Akira
Impact, cost-effectiveness, and budget implications of HPV vaccination in Kenya: A modelling study. (2023)
Mwenda, Valerian; Jalang'o, Rose; Miano, Christine; Bor, Joan-Paula; Nyangasi, Mary; Mecca, Lucy; Were, Vincent; Kariithi, Edward; Pecenka, Clint; Schuind, Anne; Abbas, Kaja; Clark, Andrew
Survey of current policies towards widening cervical screening coverage among vulnerable women in 22 European countries. (2023)
Mallafré-Larrosa, Meritxell; Ritchie, David; Papi, Ginevra; Mosquera, Isabel; Mensah, Keitly; Lucas, Eric; Bøje, Rikke Buus; Kirkegaard, Pia; Andersen, Berit; Basu, Partha; CBIG-SCREEN Consortium [Inc Foss, A.]
Cost-effectiveness of pharmaceutical strategies to prevent respiratory syncytial virus disease in young children: a decision-support model for use in low-income and middle-income countries. (2023)
Mahmud, Sarwat; Baral, Ranju; Sanderson, Colin; Pecenka, Clint; Jit, Mark; Li, You; Clark, Andrew
Tuberculosis and nutrition: what gets measured gets managed. (2023)
McQuaid, C Finn; Sinha, Pranay; Bhargava, Madhavi; Weerasuriya, Chathika; Houben, Rein MGJ; Bhargava, Anurag
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Changes in COVID-19-related mortality across key demographic and clinical subgroups in England from 2020 to 2022: a retrospective cohort study using the OpenSAFELY platform. (2023)
Nab, Linda; Parker, Edward PK; Andrews, Colm D; Hulme, William J; Fisher, Louis; Morley, Jessica; Mehrkar, Amir; MacKenna, Brian; Inglesby, Peter; Morton, Caroline E; Bacon, Sebastian CJ; Hickman, George; Evans, David; Ward, Tom; Smith, Rebecca M; Davy, Simon; Dillingham, Iain; Maude, Steven; Butler-Cole, Ben FC; O'Dwyer, Thomas; Stables, Catherine L; Bridges, Lucy; Bates, Christopher; Cockburn, Jonathan; Parry, John; Hester, Frank; Harper, Sam; Zheng, Bang; Williamson, Elizabeth J; Eggo, Rosalind M; Evans, Stephen JW; Goldacre, Ben; Tomlinson, Laurie A; Walker, Alex J; OpenSAFELY Collaborative
Monitoring Temporal Changes in SARS-CoV-2 Spike Antibody Levels and Variant-Specific Risk for Infection, Dominican Republic, March 2021-August 2022. (2023)
Nilles, Eric J; de St Aubin, Michael; Dumas, Devan; Duke, William; Etienne, Marie Caroline; Abdalla, Gabriela; Jarolim, Petr; Oasan, Timothy; Garnier, Salome; Iihoshi, Naomi; Lopez, Beatriz; de la Cruz, Lucia; Puello, Yosanly Cornelio; Baldwin, Margaret; Roberts, Kathryn W; Peña, Farah; Durski, Kara; Sanchez, Isaac Miguel; Gunter, Sarah M; Kneubehl, Alexander R; Murray, Kristy O; Lino, Allison; Strobel, Sarah; Baez, Amado Alejandro; Lau, Colleen L; Kucharski, Adam; Gutiérrez, Emily Zielinski; Skewes-Ramm, Ronald; Vasquez, Marietta; Paulino, Cecilia Then
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Global impact and cost-effectiveness of one-dose versus two-dose human papillomavirus vaccination schedules: a comparative modelling analysis. (2023)
Prem, Kiesha; Choi, Yoon Hong; Bénard, Élodie; Burger, Emily A; Hadley, Liza; Laprise, Jean-François; Regan, Mary Caroline; Drolet, Mélanie; Sy, Stephen; Abbas, Kaja; Portnoy, Allison; Kim, Jane J; Brisson, Marc; Jit, Mark
The potential impact of novel tuberculosis vaccine introduction on economic growth in low- and middle-income countries: A modeling study. (2023)
Portnoy, Allison; Arcand, Jean-Louis; Clark, Rebecca A; Weerasuriya, Chathika K; Mukandavire, Christinah; Bakker, Roel; Patouillard, Edith; Gebreselassie, Nebiat; Zignol, Matteo; Jit, Mark; White, Richard G; Menzies, Nicolas A
The potential impact of novel tuberculosis vaccines on health equity and financial protection in low-income and middle-income countries. (2023)
Portnoy, Allison; Clark, Rebecca A; Weerasuriya, Chathika K; Mukandavire, Christinah; Quaife, Matthew; Bakker, Roel; Garcia Baena, Inés; Gebreselassie, Nebiat; Zignol, Matteo; Jit, Mark; White, Richard G; Menzies, Nicolas A
Inferring the differences in incubation-period and generation-interval distributions of the Delta and Omicron variants of SARS-CoV-2. (2023)
Park, Sang Woo; Sun, Kaiyuan; Abbott, Sam; Sender, Ron; Bar-On, Yinon M; Weitz, Joshua S; Funk, Sebastian; Grenfell, Bryan T; Backer, Jantien A; Wallinga, Jacco; Viboud, Cecile; Dushoff, Jonathan
Relative role of border restrictions, case finding and contact tracing in controlling SARS-CoV-2 in the presence of undetected transmission: a mathematical modelling study. (2023)
Pung, Rachael; Clapham, Hannah E; Russell, Timothy W; CMMID COVID-19 Working Group; Lee, Vernon J; Kucharski, Adam J
Maternal immunisation against Group B Streptococcus: A global analysis of health impact and cost-effectiveness. (2023)
Procter, Simon R; Gonçalves, Bronner P; Paul, Proma; Chandna, Jaya; Seedat, Farah; Koukounari, Artemis; Hutubessy, Raymond; Trotter, Caroline; Lawn, Joy E; Jit, Mark
The cost and cost-effectiveness of novel tuberculosis vaccines in low- and middle-income countries: A modeling study. (2023)
Portnoy, Allison; Clark, Rebecca A; Quaife, Matthew; Weerasuriya, Chathika K; Mukandavire, Christinah; Bakker, Roel; Deol, Arminder K; Malhotra, Shelly; Gebreselassie, Nebiat; Zignol, Matteo; Sim, So Yoon; Hutubessy, Raymond CW; Baena, Inés Garcia; Nishikiori, Nobuyuki; Jit, Mark; White, Richard G; Menzies, Nicolas A
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Quantifying progression and regression across the spectrum of pulmonary tuberculosis: a data synthesis study. (2023)
Richards, Alexandra S; Sossen, Bianca; Emery, Jon C; Horton, Katherine C; Heinsohn, Torben; Frascella, Beatrice; Balzarini, Federica; Oradini-Alacreu, Aurea; Häcker, Brit; Odone, Anna; McCreesh, Nicky; Grant, Alison D; Kranzer, Katharina; Cobelens, Frank; Esmail, Hanif; Houben, Rein MGJ
What, how and who: Cost-effectiveness analyses of COVID-19 vaccination to inform key policies in Nigeria. (2023)
Ruiz, Francis J; Torres-Rueda, Sergio; Pearson, Carl AB; Bergren, Eleanor; Okeke, Chinyere; Procter, Simon R; Madriz-Montero, Andres; Jit, Mark; Vassall, Anna; Uzochukwu, Benjamin SC
Quantifying the value of viral genomics when inferring who infected whom in the 2014-16 Ebola virus outbreak in Guinea. (2023)
Robert, Alexis; Tsui Lok Hei, Joseph; Watson, Conall H; Gsell, Pierre-Stéphane; Hall, Yper; Rambaut, Andrew; Longini, Ira M; Sakoba, Keïta; Kucharski, Adam J; Touré, Alhassane; Danmadji Nadlaou, Sévérine; Saidou Barry, Mamadou; Fofana, Thierno Oumar; Lansana Kaba, Ibrahima; Sylla, Lansana; Diaby, Mohamed Lamine; Soumah, Ousmane; Diallo, Abdourahime; Niare, Amadou; Diallo, Abdourahamane; Eggo, Rosalind M; Caroll, Miles W; Henao-Restrepo, Ana Maria; Edmunds, W John; Hué, Stéphane
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Childhood and adolescent factors shaping vulnerability to underage entry into sex work: a quantitative hierarchical analysis of female sex workers in Nairobi, Kenya. (2023)
Shah, Pooja; Kabuti, Rhoda; Beksinska, Alicja; Nyariki, Emily; Babu, Hellen; Kungu, Mary; Jama, Zaina; Ngurukiri, Pauline; Maisha Fiti Study Champions; Kaul, Rupert; Kyegombe, Nambusi; Medley, Graham F; Devries, Karen; Seeley, Janet; Weiss, Helen Anne; Beattie, Tara S; Kimani, Joshua
A systematic review of the cost-effectiveness of interventions to increase cervical cancer screening among underserved women in Europe. (2023)
Sun, Li; Patel, Shruti; Fiorina, Camilla; Glass, Audrey; Rochaix, Lise; CBIG-SCREEN Consortium; Foss, Anna M; Legood, Rosa
Is neglect of self-clearance biasing TB vaccine impact estimates? (2023)
Scarponi, Danny; Clark, Rebecca A; Weerasuriya, Chathika Krishan; Emery, Jon; Houben, Rein MGJ; White, Richard; McCreesh, Nicky
Defining a research agenda for environmental wastewater surveillance of pathogens. (2023)
Shaw, Alexander G; Troman, Catherine; Akello, Joyce Odeke; O'Reilly, Kathleen M; Gauld, Jillian; Grow, Stephanie; Grassly, Nicholas; Steele, Duncan; Blazes, David; Kumar, Supriya; Environmental Surveillance Working Group
Asymptomatic but infectious - The silent driver of pathogen transmission. A pragmatic review. (2023)
Shaikh, Nabila; Swali, Pooja; Houben, Rein MGJ
Syndemic of factors that shape the early lives of women who enter into sex work: a qualitative methods study from Nairobi, Kenya. (2023)
Shah, Pooja; Beattie, Tara S; Kabuti, Rhoda; Liku, Jennifer; Kung'u, Mary; Babu, Hellen; Jama, Zaina; Maisha Fiti Study Champions; Kaul, Rupert; Weiss, Helen Anne; Kyegombe, Nambusi; Medley, Graham F; Devries, Karen; Gafos, Mitzy; Nyariki, Emily; Kimani, Joshua; Seeley, Janet
The natural history of untreated pulmonary tuberculosis in adults: a systematic review and meta-analysis. (2023)
Sossen, Bianca; Richards, Alexandra S; Heinsohn, Torben; Frascella, Beatrice; Balzarini, Federica; Oradini-Alacreu, Aurea; Odone, Anna; Rogozinska, Ewelina; Häcker, Brit; Cobelens, Frank; Kranzer, Katharina; Houben, Rein MGJ; Esmail, Hanif
Demonstrating multi-country calibration of a tuberculosis model using new history matching and emulation package - hmer. (2023)
Scarponi, Danny; Iskauskas, Andrew; Clark, Rebecca A; Vernon, Ian; McKinley, Trevelyan J; Goldstein, Michael; Mukandavire, Christinah; Deol, Arminder; Weerasuriya, Chathika; Bakker, Roel; White, Richard G; McCreesh, Nicky
Impact of Reversion of Mycobacterium tuberculosis Immunoreactivity Tests on the Estimated Annual Risk of Tuberculosis Infection. (2023)
Schwalb, Alvaro; Emery, Jon C; Dale, Katie D; Horton, Katherine C; Ugarte-Gil, César A; Houben, Rein MGJ
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Analyses of the return on investment of public health interventions: a scoping review and recommendations for future studies. (2023)
Turner, Hugo C; Hori, Yoshiaki; Revill, Paul; Rattanavipapong, Waranya; Arai, Ko; Nonvignon, Justice; Jit, Mark; Teerawattananon, Yot
Health Economics Research on Non-surgical Biomedical HIV Prevention: Identifying Gaps and Proposing a Way Forward. (2023)
Torres-Rueda, Sergio; Terris-Prestholt, Fern; Gafos, Mitzy; Indravudh, Pitchaya Peach; Giddings, Rebecca; Bozzani, Fiammetta; Quaife, Matthew; Ghazaryan, Lusine; Mann, Carlyn; Osborne, Connie; Kavanagh, Matthew; Godfrey-Faussett, Peter; Medley, Graham; Malhotra, Shelly
Impact of tiered measures on social contact and mixing patterns of in Italy during the second wave of COVID-19. (2023)
Tizzani, Michelle; De Gaetano, Alessandro; Jarvis, Christopher I; Gimma, Amy; Wong, Kerry; Edmunds, W John; Beutels, Philippe; Hens, Niel; Coletti, Pietro; Paolotti, Daniela
Use of a Sustainable Livelihood Framework-Based Measure to Estimate Socioeconomic Impact of Tuberculosis on Households. (2023)
Timire, Collins; Pedrazzoli, Debora; Boccia, Delia; Houben, Rein MGJ; Ferrand, Rashida A; Bond, Virginia; Kranzer, Katharina
Optimal age targeting for pneumococcal vaccination in older adults; a modelling study. (2023)
Thindwa, Deus; Clifford, Samuel; Kleynhans, Jackie; von Gottberg, Anne; Walaza, Sibongile; Meiring, Susan; Swarthout, Todd D; Miller, Elizabeth; McIntyre, Peter; Andrews, Nick; Amin-Chowdhury, Zahin; Fry, Norman; Jambo, Kondwani C; French, Neil; Almeida, Samanta Cristine Grassi; Ladhani, Shamez N; Heyderman, Robert S; Cohen, Cheryl; de Cunto Brandileone, Maria Cristina; Flasche, Stefan
Pay-it-forward influenza vaccination among older adults and children: A cost-effectiveness analysis in China. (2023)
Tang, Fanny Fong-Yi; Kosana, Priya; Jit, Mark; Terris-Prestholt, Fern; Wu, Dan; Ong, Jason J; Tucker, Joseph D
Using models and maps to inform Target Product Profiles and Preferred Product Characteristics: the example of Wolbachia replacement. (2023)
Tiley, Katie; Entwistle, Julian; Thomas, Bruce; Yakob, Laith; Brady, Oliver
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Colonization and transmission of Staphylococcus aureus in schools: a citizen science project. (2023)
van Tonder, Andries J; McCullagh, Frances; McKeand, Hanan; Thaw, Sue; Bellis, Katie; Raisen, Claire; Lay, Liz; Aggarwal, Dinesh; Holmes, Mark; Parkhill, Julian; Harrison, Ewan M; Kucharski, Adam; Conlan, Andrew
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Transient increased risk of influenza infection following RSV infection in South Africa: findings from the PHIRST study, South Africa, 2016-2018. (2023)
Waterlow, Naomi R; Kleynhans, Jackie; Wolter, Nicole; Tempia, Stefano; Eggo, Rosalind M; Hellferscee, Orienka; Lebina, Limakatso; Martinson, Neil; Wagner, Ryan G; Moyes, Jocelyn; von Gottberg, Anne; Cohen, Cheryl; Flasche, Stefan
Social contact patterns during the COVID-19 pandemic in 21 European countries - evidence from a two-year study. (2023)
Wong, Kerry LM; Gimma, Amy; Coletti, Pietro; CoMix Europe Working Group; Faes, Christel; Beutels, Philippe; Hens, Niel; Jaeger, Veronika K; Karch, Andre; Johnson, Helen; Edmunds, WJohn; Jarvis, Christopher I
Potential health and economic impact of paediatric vaccination using next-generation influenza vaccines in Kenya: a modelling study. (2023)
Waterlow, Naomi R; Radhakrishnan, Sreejith; Dawa, Jeanette; van Leeuwen, Edwin; Procter, Simon R; Lambach, Philipp; Bresee, Joseph; Mazur, Marie; Eggo, Rosalind M; Jit, Mark
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Adding new childhood vaccines to China's National Immunization Program: evidence, benefits, and priorities. (2023)
Zhang, Haijun; Lai, Xiaozhen; Patenaude, Bryan N; Jit, Mark; Fang, Hai
Comparative effectiveness of nirmatrelvir/ritonavir versus sotrovimab and molnupiravir for preventing severe COVID-19 outcomes in non-hospitalised high-risk patients during Omicron waves: observational cohort study using the OpenSAFELY platform. (2023)
Zheng, Bang; Tazare, John; Nab, Linda; Green, Amelia Ca; Curtis, Helen J; Mahalingasivam, Viyaasan; Herrett, Emily L; Costello, Ruth E; Eggo, Rosalind M; Speed, Victoria; Bacon, Sebastian Cj; Bates, Christopher; Parry, John; Cockburn, Jonathan; Hester, Frank; Harper, Sam; Schaffer, Andrea L; Hulme, William J; Mehrkar, Amir; Evans, Stephen Jw; MacKenna, Brian; Goldacre, Ben; Douglas, Ian J; Tomlinson, Laurie A; OpenSAFELY Collaborative
