Year Authors/Creators Item Type Full Text

Article

Validation of nasopharyngeal sampling and culture techniques for detection of Streptococcus pneumoniae in children in Kenya. (2007) Abdullahi, Osman; Wanjiru, Eva; Musyimi, Robert; Glass, Nina; Scott, J Anthony G

Evidence for a link between parasite genotype and outcome of infection with Entamoeba histolytica. (2007) Ali, Ibne Karim M; Mondal, Utpal; Roy, Shantanu; Haque, Rashidul; Petri, William A; Clark, C Graham

Use of PCR amplification of tRNA gene-linked short tandem repeats for genotyping Entamoeba histolytica. (2005) Ali, Ibne Karim M; Zaki, Mehreen; Clark, C Graham

Neutral red staining of cells of a sulfolipid-deficient Mycobacterium tuberculosis pks2 mutant proves that sulfolipids are not responsible for this cytochemical reaction. (2004) Andreu, Núria; Gibert, Isidre; Luquin, Marina; Kolattukudy, Pappachan E; Sirakova, Tatiana

Pandemic serovars (O3:K6 and O4:K68) of Vibrio parahaemolyticus associated with diarrhea in Mozambique: spread of the pandemic into the African continent. (2005) Ansaruzzaman, M; Lucas, Marcelino; Deen, Jacqueline L; Bhuiyan, NA; Wang, Xuan-Yi; Safa, Ashrafus; Sultana, Marzia; Chowdhury, A; Nair, G Balakrish; Sack, David A; von Seidlein, Lorenz; Puri, Mahesh K; Ali, Mohammad; Chaignat, Claire-Lise; Clemens, John D; Barreto, Avertino

Changing patterns of rotavirus genotypes in ghana: emergence of human rotavirus G9 as a major cause of diarrhea in children. (2003) Armah, George E; Steele, Andrew Duncan; Binka, Fred N; Esona, Mathew D; Asmah, Richard Harry; Anto, Francis; Brown, David; Green, Jon; Cutts, Felicity; Hall, Andy

Rotavirus G and P genotypes in rural Ghana. (2001) Asmah, RH; Green, J; Armah, GE; Gallimore, CI; Gray, JJ; Iturriza-Gómara, M; Anto, F; Oduro, A; Binka, FN; Brown, DW; Cutts, F

Fatal wound infection caused by Chromobacterium violaceum in Ho Chi Minh City, Vietnam. (2008) Baker, Stephen; Campbell, James I; Stabler, Richard; Nguyen, Hoang VM; To, Diep S; Nguyen, Dung V; Farrar, Jeremy

Comparative study of the epidemiology of rotavirus in children from a community-based birth cohort and a hospital in South India. (2006) Banerjee, Indrani; Ramani, Sasirekha; Primrose, Beryl; Moses, Prabhakar; Iturriza-Gomara, Miren; Gray, James J; Jaffar, Shabbar; Monica, Bindhu; Muliyil, Jaya Prakash; Brown, David W; Estes, Mary K; Kang, Gagandeep

Persistent Transmission of Shigellosis in England Is Associated with a Recently Emerged Multidrug-Resistant Strain of Shigella sonnei. (2020) Bardsley, Megan; Jenkins, Claire; Mitchell, Holly D; Mikhail, Amy FW; Baker, Kate S; Foster, Kirsty; Hughes, Gwenda; Dallman, Timothy J

Multilocus sequence typing directly on DNA from clinical samples and a cultured isolate to investigate linked fatal pneumococcal disease in residents of a shelter for homeless men. (2005) Birtles, Andrew; McCarthy, Noel; Sheppard, Carmen L; Rutter, Harry; Guiver, Malcolm; Haworth, Elizabeth; George, Robert C

Comamonas kerstersii and the perforated appendix. (2014) Biswas, Jason S; Fitchett, Joseph; O'Hara, Geraldine

Longitudinal study of intestinal Entamoeba histolytica infections in asymptomatic adult carriers. (2003) Blessmann, Joerg; Ali, Ibne Karim M; Nu, Phuong A Ton; Dinh, Binh T; Viet, Tram Q Ngo; Van, An Le; Clark, C Graham; Tannich, Egbert

DNA microarrays for virus detection in cases of central nervous system infection. (2004) Boriskin, Yury S; Rice, Philip S; Stabler, Richard A; Hinds, Jason; Al-Ghusein, Hasan; Vass, Keith; Butcher, Philip D

Multiplex PCR assay for unequivocal differentiation of Actinobacillus pleuropneumoniae serovars 1 to 3, 5 to 8, 10, and 12. (2014) Bossé, Janine T; Li, Yanwen; Angen, Øystein; Weinert, Lucy A; Chaudhuri, Roy R; Holden, Matthew T; Williamson, Susanna M; Maskell, Duncan J; Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; BRaDP1T consortium

Performance of the MGIT TBc identification test and meta-analysis of MPT64 assays for identification of the Mycobacterium tuberculosis complex in liquid culture. (2011) Brent, Andrew J; Mugo, Daisy; Musyimi, Robert; Mutiso, Agnes; Morpeth, Susan; Levin, Michael; Scott, J Anthony G

Genome-wide DNA microarray analysis of Francisella tularensis strains demonstrates extensive genetic conservation within the species but identifies regions that are unique to the highly virulent F. tularensis subsp. tularensis. (2003) Broekhuijsen, Martien; Larsson, Pär; Johansson, Anders; Byström, Mona; Eriksson, Ulla; Larsson, Eva; Prior, Richard G; Sjöstedt, Anders; Titball, Richard W; Forsman, Mats

Aeromonas salmonicida subsp. salmonicida type strain does not possess a type III secretion system. (2009) Burr, Sarah E; Frey, Joachim

Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages. (2016) Cairns, MD; Preston, MD; Hall, CL; Gerding, DN; Hawkey, PM; Kato, H; Kim, H; Kuijper, EJ; Lawley, TD; Pituch, H; Reid, S; Kullin, B; Riley, TV; Solomon, K; Tsai, PJ; Weese, JS; Stabler, RA; Wren, BW

Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages". (2017) Cairns, MD; Preston, MD; Hall, CL; Gerding, DN; Hawkey, PM; Kato, H; Kim, H; Kuijper, EJ; Lawley, TD; Pituch, H; Reid, S; Kullin, B; Riley, TV; Solomon, K; Tsai, PJ; Weese, JS; Stabler, RA; Wren, BW

Genomic Epidemiology of a Protracted Hospital Outbreak Caused by a Toxin A-Negative Clostridium difficile Sublineage PCR Ribotype 017 Strain in London, England. (2015) Cairns, MD; Preston, MD; Lawley, TD; Clark, TG; Stabler, RA; Wren, BW

The PapilloCheck Assay for Detection of High-Grade Cervical Intraepithelial Neoplasia. (2015) Crosbie, Emma J; Bailey, Andrew; Sargent, Alex; Gilham, Clare; Peto, Julian; Kitchener, Henry C description

Multidrug-Resistant Mycobacterium tuberculosis of the Latin American Mediterranean Lineage, Wrongly Identified as Mycobacterium pinnipedii (Spoligotype International Type 863 [SIT863]), Causing Active Tuberculosis in South Brazil. (2015) Dalla Costa, Elis R; Vasconcelos, Sidra EG; Esteves, Leonardo S; Gomes, Harrison M; Gomes, Lia L; da Silva, Pedro Almeida; Perdigão, João; Portugal, Isabel; Viveiros, Miguel; McNerney, Ruth; Pain, Arnab; Clark, Taane G; Rastogi, Nalin; Unis, Gisela; Rossetti, Maria Lucia R; Suffys, Philip Noel

Burkholderia pseudomallei: Challenges for the Clinical Microbiology Laboratory-a Response from the Front Line. (2017) Dance, David AB; Limmathurotsakul, Direk; Currie, Bart J

Genotype MTBDRplus for direct detection of Mycobacterium tuberculosis and drug resistance in strains from gold miners in South Africa. (2012) Dorman, Susan E; Chihota, Violet N; Lewis, James J; van der Meulen, Minty; Mathema, Barun; Beylis, Natalie; Fielding, Katherine L; Grant, Alison D; Churchyard, Gavin J

Effect of pneumococcal vaccination on nasopharyngeal carriage of Streptococcus pneumoniae, Haemophilus influenzae, Moraxella catarrhalis, and Staphylococcus aureus in Fijian children. (2012) Dunne, Eileen M; Manning, Jayne; Russell, Fiona M; Robins-Browne, Roy M; Mulholland, E Kim; Satzke, Catherine

Multilocus sequence typing of Streptococcus pneumoniae by use of mass spectrometry. (2011) Dunne, Eileen M; Ong, Eng Kok; Moser, Ralf J; Siba, Peter M; Phuanukoonnon, Suparat; Greenhill, Andrew R; Robins-Browne, Roy M; Mulholland, E Kim; Satzke, Catherine

Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam. (2016) Duong, Vu Thuy; Phat, Voong Vinh; Tuyen, Ha Thanh; Dung, Tran Thi Ngoc; Trung, Pham Duc; Minh, Pham Van; Tu, Le Thi Phuong; Campbell, James I; Le Phuc, Hoang; Ha, Ton Thi Thanh; Ngoc, Nguyen Minh; Huong, Nguyen Thi Thanh; Tam, Pham Thi Thanh; Huong, Dang Thao; Xang, Nguyen Van; Dong, Nguyen; Phuong, Le Thi; Hung, Nguyen Van; Phu, Bui Duc; Phuc, Tran My; Thwaites, Guy E; Vi, Lu Lan; Rabaa, Maia A; Thompson, Corinne N; Baker, Stephen

Association of schistosomiasis with false-positive HIV test results in an African adolescent population. (2010) Everett, Dean B; Baisely, Kathy J; McNerney, Ruth; Hambleton, Ian; Chirwa, Tobias; Ross, David A; Changalucha, John; Watson-Jones, Deborah; Helmby, Helena; Dunne, David W; Mabey, David; Hayes, Richard J

Suitability of simple human immunodeficiency virus rapid tests in clinical trials in community-based clinic settings. (2009) Everett, Dean B; Baisley, Kathy; Changalucha, John; Vallely, Andrew; Watson-Jones, Deborah; Cook, Claire; Knight, Louise; Ross, David A; Mugeye, Kokugonza; McCormack, Sheena; Lacey, Charles J; Jentsch, Ute; Hayes, Richard J

Evaluation of Xpert MTB/RIF for detection of tuberculosis from blood samples of HIV-infected adults confirms Mycobacterium tuberculosis bacteremia as an indicator of poor prognosis. (2013) Feasey, Nicholas A; Banada, Padmapriya P; Howson, William; Sloan, Derek J; Mdolo, Aaron; Boehme, Catharina; Chipungu, Geoffrey A; Allain, Theresa J; Heyderman, Robert S; Corbett, Elizabeth L; Alland, David

Diversity of noroviruses cocirculating in the north of England from 1998 to 2001. (2004) Gallimore, Chris I; Green, Jonathan; Lewis, David; Richards, Alison F; Lopman, Benjamin A; Hale, Antony D; Eglin, Roger; Gray, Jim J; Brown, David WG

Distribution study of Chlamydia trachomatis serovars among high-risk women in China performed using PCR-restriction fragment length polymorphism genotyping. (2007) Gao, Xing; Chen, Xiang-Sheng; Yin, Yue-Ping; Zhong, Ming-Ying; Shi, Mei-Qin; Wei, Wan-Hui; Chen, Qiang; Peeling, Rosanna W; Mabey, David

"Pathogen Eradication" and "Emerging Pathogens": Difficult Definitions in Cystic Fibrosis. (2018) Gilligan, Peter H; Downey, Damian G; Elborn, J Stuart; Flume, Patrick A; Funk, Sebastian; Gilpin, Deirdre; Kidd, Timothy J; McCaughan, John; Millar, B Cherie; Murphy, Philip G; Rendall, Jacqueline C; Tunney, Michael M; Moore, John E

Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation. (2017) Gordon, NC; Pichon, B; Golubchik, T; Wilson, DJ; Paul, J; Blanc, DS; Cole, K; Collins, J; Cortes, N; Cubbon, M; Gould, FK; Jenks, PJ; Llewelyn, M; Nash, JQ; Orendi, JM; Paranthaman, K; Price, JR; Senn, L; Thomas, HL; Wyllie, S; Crook, DW; Peto, TEA; Walker, AS; Kearns, AM

Prediction of Staphylococcus aureus antimicrobial resistance by whole-genome sequencing. (2014) Gordon, NC; Price, JR; Cole, K; Everitt, R; Morgan, M; Finney, J; Kearns, AM; Pichon, B; Young, B; Wilson, DJ; Llewelyn, MJ; Paul, J; Peto, TEA; Crook, DW; Walker, AS; Golubchik, T

Microbial Interactions in the Cystic Fibrosis Airway. (2018) Granchelli, Ann M; Adler, Frederick R; Keogh, Ruth H; Kartsonaki, Christiana; Cox, David R; Liou, Theodore G

Tuberculosis diagnosis and multidrug resistance testing by direct sputum culture in selective broth without decontamination or centrifugation. (2008) Grandjean, Louis; Martin, Laura; Gilman, Robert H; Valencia, Teresa; Herrera, Beatriz; Quino, Willi; Ramos, Eric; Rivero, Maribel; Montoya, Rosario; Escombe, A Roderick; Coleman, David; Mitchison, Denis; Evans, Carlton A

Added value of an oropharyngeal swab in detection of viruses in children hospitalized with lower respiratory tract infection. (2011) Hammitt, Laura L; Kazungu, Sidi; Welch, Steve; Bett, Anne; Onyango, Clayton O; Gunson, Rory N; Scott, J Anthony G; Nokes, D James

Validation of the FluoroType MTBDR Assay for Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis Complex Isolates. (2018) Hillemann, Doris; Haasis, Carsten; Andres, Sönke; Behn, Tobias; Kranzer, Katharina

Development of a Multiplex PCR Assay for Rapid Molecular Serotyping of Haemophilus parasuis. (2015) Howell, Kate J; Peters, Sarah E; Wang, Jinhong; Hernandez-Garcia, Juan; Weinert, Lucy A; Luan, Shi-Lu; Chaudhuri, Roy R; Angen, Øystein; Aragon, Virginia; Williamson, Susanna M; Parkhill, Julian; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Maskell, Duncan J; Tucker, Alexander W; BRaDP1T Consortium

"Pathotyping" Multiplex PCR Assay for Haemophilus parasuis: a Tool for Prediction of Virulence. (2017) Howell, Kate J; Weinert, Lucy A; Peters, Sarah E; Wang, Jinhong; Hernandez-Garcia, Juan; Chaudhuri, Roy R; Luan, Shi-Lu; Angen, Øystein; Aragon, Virginia; Williamson, Susanna M; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Maskell, Duncan J; Tucker, Alexander W

Optimization and evaluation of a PCR assay for detecting toxoplasmic encephalitis in patients with AIDS. (2002) Joseph, Priya; Calderón, Maritza M; Gilman, Robert H; Quispe, Monica L; Cok, Jaime; Ticona, Eduardo; Chavez, Victor; Jimenez, Juan A; Chang, Maria C; Lopez, Martín J; Evans, Carlton A

Optimal positive cutoff points for careHPV testing of clinician- and self-collected specimens in primary cervical cancer screening: an analysis from rural China. (2014) Kang, Le-Ni; Jeronimo, Jose; Qiao, You-Lin; Zhao, Fang-Hui; Chen, Wen; Valdez, Melissa; Zhang, Xun; Bansil, Pooja; Paul, Proma; Bai, Ping; Peck, Roger; Li, Jing; Chen, Feng; Stoler, Mark H; Castle, Philip E

Detection and initial characterization of novel capsular polysaccharide among diverse Campylobacter jejuni strains using alcian blue dye. (2001) Karlyshev, AV; Wren, BW

Microscopic Observation Drug Susceptibility Assay for Rapid Diagnosis of Lymph Node Tuberculosis and Detection of Drug Resistance. (2015) Kirwan, Daniela E; Ugarte-Gil, Cesar; Gilman, Robert H; Caviedes, Luz; Rizvi, Hasan; Ticona, Eduardo; Chavez, Gonzalo; Cabrera, José Luis; Matos, Eduardo D; Evans, Carlton A; Moore, David AJ; Friedland, Jon S; Lymph Node TB Working Group, Peru

Zoonotic Transfer of Clostridium difficile Harboring Antimicrobial Resistance between Farm Animals and Humans. (2017) Knetsch, CW; Kumar, N; Forster, SC; Connor, TR; Browne, HP; Harmanus, C; Sanders, IM; Harris, SR; Turner, L; Morris, T; Perry, M; Miyajima, F; Roberts, P; Pirmohamed, M; Songer, JG; Weese, JS; Indra, A; Corver, J; Rupnik, M; Wren, BW; Riley, TV; Kuijper, EJ; Lawley, TD

Population Structure of Mycobacterium bovis in Germany: a Long-Term Study Using Whole-Genome Sequencing Combined with Conventional Molecular Typing Methods. (2020) Kohl, Thomas A; Kranzer, Katharina; Andres, Sönke; Wirth, Thierry; Niemann, Stefan; Moser, Irmgard

Definition of the Beijing/W lineage of Mycobacterium tuberculosis on the basis of genetic markers. (2004) Kremer, Kristin; Glynn, Judith R; Lillebaek, Troels; Niemann, Stefan; Kurepina, Natalia E; Kreiswirth, Barry N; Bifani, Pablo J; van Soolingen, Dick

Two cases of bacteriemia caused by nontoxigenic, non-O1, non-O139 Vibrio cholerae isolates in Ho Chi Minh City, Vietnam. (2014) Lan, Nguyen Phu Huong; Nga, Tran Vu Thieu; Yen, Nguyen Thi Thu; Dung, Le Thi; Tuyen, Ha Thanh; Campbell, James I; Whitehorn, Jamie; Thwaites, Guy; Chau, Nguyen Van Vinh; Baker, Stephen

Plasmid copy number and disease severity in naturally occurring ocular Chlamydia trachomatis infection. (2013) Last, Anna R; Roberts, Chrissy H; Cassama, Eunice; Nabicassa, Meno; Molina-Gonzalez, Sandra; Burr, Sarah E; Mabey, David CW; Bailey, Robin L; Holland, Martin J

Detection of multiple noroviruses associated with an international gastroenteritis outbreak linked to oyster consumption. (2006) Le Guyader, Françoise S; Bon, Fabienne; DeMedici, Dario; Parnaudeau, Sylvain; Bertone, Alessandra; Crudeli, Silvia; Doyle, Aoife; Zidane, Mohamed; Suffredini, Elisabetta; Kohli, Evelyne; Maddalo, Francesco; Monini, Marina; Gallay, Anne; Pommepuy, Monique; Pothier, Pierre; Ruggeri, Franco M

Performance of HerpeSelect and Kalon assays in detection of antibodies to herpes simplex virus type 2. (2008) LeGoff, Jérôme; Mayaud, Philippe; Gresenguet, Gérard; Weiss, Helen A; Nzambi, Khonde; Frost, Eric; Pepin, Jacques; Belec, Laurent; ANRS 12-12 Study Group

Discrimination of single-copy IS6110 DNA fingerprints of Mycobacterium tuberculosis isolates by high-resolution minisatellite-based typing. (2002) Lee, Ann SG; Tang, Lynn LH; Lim, Irene HK; Bellamy, Richard; Wong, Sin-Yew

Real-time PCR quantification of genital shedding of herpes simplex virus (HSV) and human immunodeficiency virus (HIV) in women coinfected with HSV and HIV. (2006) Legoff, Jérôme; Bouhlal, Hicham; Grésenguet, Gérard; Weiss, Helen; Khonde, Nzambi; Hocini, Hakim; Désiré, Nathalie; Si-Mohamed, Ali; de Dieu Longo, Jean; Chemin, Cécile; Frost, Eric; Pépin, Jacques; Malkin, Jean-Elie; Mayaud, Philippe; Bélec, Laurent

Inter- and intra-assay reproducibility of microplate Alamar blue assay results for isoniazid, rifampicin, ethambutol, streptomycin, ciprofloxacin, and capreomycin drug susceptibility testing of Mycobacterium tuberculosis. (2008) Leonard, Brian; Coronel, Jorge; Siedner, Mark; Grandjean, Louis; Caviedes, Luz; Navarro, Pilar; Gilman, Robert H; Moore, David AJ

Global Distribution of Invasive Serotype 35D Streptococcus pneumoniae Isolates following Introduction of 13-Valent Pneumococcal Conjugate Vaccine. (2018) Lo, Stephanie W; Gladstone, Rebecca A; van Tonder, Andries J; Hawkins, Paulina A; Kwambana-Adams, Brenda; Cornick, Jennifer E; Madhi, Shabir A; Nzenze, Susan A; du Plessis, Mignon; Kandasamy, Rama; Carter, Philip E; Eser, Özgen Köseoglu; Ho, Pak Leung; Elmdaghri, Naima; Shakoor, Sadia; Clarke, Stuart C; Antonio, Martin; Everett, Dean B; von Gottberg, Anne; Klugman, Keith P; McGee, Lesley; Breiman, Robert F; Bentley, Stephen D

Rapid diagnosis of cryptococcal meningitis by use of lateral flow assay on cerebrospinal fluid samples: influence of the high-dose "hook" effect. (2014) Lourens, Adré; Jarvis, Joseph N; Meintjes, Graeme; Samuel, Catherine M

A Simple Phosphate-Buffered-Saline-Based Extraction Method Improves Specificity of HIV Viral Load Monitoring Using Dried Blood Spots. (2017) Makadzange, A Tariro; Boyd, F Kathryn; Chimukangara, Benjamin; Masimirembwa, Collen; Katzenstein, David; Ndhlovu, Chiratidzo E

Molecular detection of mixed infections of Mycobacterium tuberculosis strains in sputum samples from patients in Karonga District, Malawi. (2010) Mallard, Kim; McNerney, Ruth; Crampin, Amelia C; Houben, Rein; Ndlovu, Richard; Munthali, Lumbani; Warren, Robin M; French, Neil; Glynn, Judith R

Investigating transmission of Mycobacterium bovis in the United Kingdom in 2005 to 2008. (2011) Mandal, Sema; Bradshaw, Louise; Anderson, Laura F; Brown, Tim; Evans, Jason T; Drobniewski, Francis; Smith, Grace; Magee, John G; Barrett, Anne; Blatchford, Oliver; Laurenson, Ian F; Seagar, Amie-Louise; Ruddy, Michael; White, P Lewis; Myers, Richard; Hawkey, Peter; Abubakar, Ibrahim

Alternative Molecular Methods for Improved Detection of Meningococcal Carriage and Measurement of Bacterial Density. (2016) Manigart, Olivier; Okeakpu, Jacinta; Odutola, Aderonke; Jarju, Sheikh; Foster-Nyarko, Ebenezer; Diallo, Kanny; Roca, Anna; Kampmann, Beate; D'Alessandro, Umberto; Sow, Samba; Antonio, Martin; Maiden, Martin J; Borrow, Ray; Stuart, James M; Trotter, Caroline L; Greenwood, Brian M

Persistence of two genotypes of Neisseria gonorrhoeae during transmission. (2003) Martin, IMC; Ghani, A; Bell, G; Kinghorn, G; Ison, CA

Comparative detection of trypanosomal DNA by loop-mediated isothermal amplification and PCR from flinders technology associates cards spotted with patient blood. (2010) Matovu, Enock; Kuepfer, Irene; Boobo, Alex; Kibona, Stafford; Burri, Christian

Genital human papillomavirus genotypes in northwestern Tanzania. (2003) Mayaud, Philippe; Weiss, Helen A; Lacey, Charles JN; Gill, Dilbinder K; Mabey, David CW

Evaluation of a PCR-based universal heteroduplex generator assay as a tool for rapid detection of multidrug-resistant Mycobacterium tuberculosis in Peru. (2003) Mayta, Holger; Gilman, Robert H; Arenas, Fanny; Valencia, Teresa; Caviedes, Luz; Montenegro, Sonia H; Ticona, Eduardo; Ortiz, Jaime; Chumpitaz, Rosa; Evans, Carlton A; Williams, Diana L; Tuberculosis Working Group in Perú

Clinical and Microbiological Aspects of β-Lactam Resistance in Staphylococcus lugdunensis. (2016) McHardy, Ian H; Veltman, Jennifer; Hindler, Janet; Bruxvoort, Katia; Carvalho, Marissa M; Humphries, Romney M

Development of a bacteriophage phage replication assay for diagnosis of pulmonary tuberculosis. (2004) McNerney, Ruth; Kambashi, Bupe S; Kinkese, Juliana; Tembwe, Ruth; Godfrey-Faussett, Peter

Colorimetric phage-based assay for detection of rifampin-resistant Mycobacterium tuberculosis. (2007) McNerney, Ruth; Mallard, Kim; Urassa, Honorathy MR; Lemma, Eshetu; Donoghue, Helen D

Same-Day Tools, Including Xpert Ultra and IRISA-TB, for Rapid Diagnosis of Pleural Tuberculosis: a Prospective Observational Study. (2019) Meldau, Richard; Randall, Philippa; Pooran, Anil; Limberis, Jason; Makambwa, Edson; Dhansay, Muhammed; Esmail, Aliasgar; Dheda, Keertan

Microscopic observation drug susceptibility assay, a rapid, reliable diagnostic test for multidrug-resistant tuberculosis suitable for use in resource-poor settings. (2004) Moore, David AJ; Mendoza, Daniel; Gilman, Robert H; Evans, Carlton AW; Hollm Delgado, María-Graciela; Guerra, Jose; Caviedes, Luz; Vargas, Daniel; Ticona, Eduardo; Ortiz, Jaime; Soto, Giselle; Serpa, Jose; Tuberculosis Working Group in Peru

Breathing new life into pneumonia diagnostics. (2009) Murdoch, David R; O'Brien, Katherine L; Scott, J Anthony G; Karron, Ruth A; Bhat, Niranjan; Driscoll, Amanda J; Knoll, Maria Deloria; Levine, Orin S

Evaluation of the Capilia TB assay for culture confirmation of Mycobacterium tuberculosis infections in Zambia and South Africa. (2010) Muyoyeta, Monde; de Haas, Petra EW; Mueller, Dirk H; van Helden, Paul D; Mwenge, Lawrence; Schaap, Ab; Kruger, Clarissa; Gey van Pittius, Nicolaas C; Lawrence, Katherine; Beyers, Nulda; Godfrey-Faussett, Peter; Ayles, Helen

Evaluation of the Roche cobas MTB and MTB-RIF/INH Assays in Samples from Germany and Sierra Leone. (2021) Nadarajan, Darshaalini; Hillemann, Doris; Kamara, Rashidatu; Foray, Lynda; Conteh, Ousman S; Merker, Matthias; Niemann, Stefan; Lau, Jasmine; Njoya, Merlin; Kranzer, Katharina; Somoskovi, Akos; Maurer, Florian P

Performance of the HerpeSelect (Focus) and Kalon enzyme-linked immunosorbent assays for detection of antibodies against herpes simplex virus type 2 by use of monoclonal antibody-blocking enzyme immunoassay and clinicovirological reference standards in Brazil. (2007) Nascimento, Maria Claudia; Ferreira, Suzete; Sabino, Ester; Hamilton, Ingrid; Parry, John; Pannuti, Claudio S; Mayaud, Philippe

Comparative study of Kaposi's sarcoma-associated herpesvirus serological assays using clinically and serologically defined reference standards and latent class analysis. (2006) Nascimento, Maria Claudia; de Souza, Vanda Akico; Sumita, Laura Masami; Freire, Wilton; Munoz, Fernando; Kim, Joseph; Pannuti, Claudio S; Mayaud, Philippe

Gold Standard Cholera Diagnostics Are Tarnished by Lytic Bacteriophage and Antibiotics. (2020) Nelson, EJ; Grembi, JA; Chao, DL; Andrews, JR; Alexandrova, L; Rodriguez, PH; Ramachandran, VV; Sayeed, MA; Wamala, JF; Debes, AK; Sack, DA; Hryckowian, AJ; Haque, F; Khatun, S; Rahman, M; Chien, A; Spormann, AM; Schoolnik, GK

Detection of severe acute respiratory syndrome coronavirus in blood of infected patients. (2004) Ng, Lisa FP; Wong, Michelle; Koh, Susie; Ooi, Eng-Eong; Tang, King-Fai; Leong, Hoe-Nam; Ling, Ai-Ee; Agathe, Lora V; Tan, Jenny; Liu, Edison T; Ren, Ee-Chee; Ng, Lee-Ching; Hibberd, Martin L

Comparison of careHPV and hybrid capture 2 assays for detection of high-risk human Papillomavirus DNA in cervical samples from HIV-1-infected African women. (2013) Ngou, Jean; Magooa, Mahlape P; Gilham, Clare; Djigma, Florencia; Didelot, Marie-Noelle; Kelly, Helen; Yonli, Albert; Sawadogo, Bernard; Lewis, David A; Delany-Moretlwe, Sinead; Mayaud, Philippe; Segondy, Michel; HARP Study Group

Development, evaluation, and validation of an oligonucleotide probe hybridization assay to subtype human immunodeficiency virus type 1 circulating recombinant form CRF02_AG. (2004) Njai, Harr F; Van der Auwera, Gert; Ngong, Chiambah A; Heyndrickx, Leo; Sawadago, Souleymane; Whittle, Hilton; Nyambi, Phillipe; Colebunders, Robert; van der Groen, Guido; Janssens, Wouter

Development of a multilocus microsatellite typing approach for discriminating strains of Leishmania (Viannia) species. (2009) Oddone, Rolando; Schweynoch, Carola; Schönian, Gabriele; de Sousa, Cintia dos Santos; Cupolillo, Elisa; Espinosa, Diego; Arevalo, Jorge; Noyes, Harry; Mauricio, Isabel; Kuhls, Katrin

Antibody Responses to Two Recombinant Treponemal Antigens (rp17 and TmpA) before and after Azithromycin Treatment for Yaws in Ghana and Papua New Guinea. (2021) Parameswaran, Nishanth; Mitjà, Oriol; Bottomley, Christian; Kwakye, Cynthia; Houinei, Wendy; Pillay, Allan; Danavall, Damien; Chi, Kai-Hua; Ballard, Ronald C; Solomon, Anthony W; Chen, Cheng Y; Bieb, Sibauk V; Adu-Sarkodie, Yaw; Mabey, David CW; Asiedu, Kingsley; Marks, Michael; Martin, Diana L

Cetyl-pyridinium chloride is useful for isolation of Mycobacterium tuberculosis from sputa subjected to long-term storage. (2005) Pardini, Manuela; Varaine, Francis; Iona, Elisabetta; Arzumanian, Erchanik; Checchi, Francesco; Oggioni, Marco Rinaldo; Orefici, Graziella; Fattorini, Lanfranco

Identification of Salmonella enterica serovar Typhi genotypes by use of rapid multiplex ligation-dependent probe amplification. (2013) Pham Thanh, Duy; Tran Vu Thieu, Nga; Tran Thuy, Chau; Lodén, Martin; Tuin, Kiki; Campbell, James I; Van Minh Hoang, Nguyen; Voong Vinh, Phat; Farrar, Jeremy J; Holt, Kathryn E; Dougan, Gordon; Baker, Stephen

Molecular typing of Treponema pallidum in South Africa: cross-sectional studies. (2002) Pillay, A; Liu, H; Ebrahim, S; Chen, CY; Lai, W; Fehler, G; Ballard, RC; Steiner, B; Sturm, AW; Morse, SA

Evaluation of Xpert MTB/RIF for Detection of Mycobacterium tuberculosis in Cerebrospinal Fluid. (2016) Pink, F; Brown, TJ; Kranzer, K; Drobniewski, F

Mitochondrial DNA targets increase sensitivity of malaria detection using loop-mediated isothermal amplification. (2010) Polley, Spencer D; Mori, Yasuyoshi; Watson, Julie; Perkins, Mark D; González, Iveth J; Notomi, Tsugunori; Chiodini, Peter L; Sutherland, Colin J

Use of genome level-informed PCR as a new investigational approach for analysis of outbreak-associated Mycobacterium tuberculosis isolates. (2004) Rajakumar, Kumar; Shafi, Jamila; Smith, Rebecca J; Stabler, Richard A; Andrew, Peter W; Modha, Deborah; Bryant, Gerry; Monk, Philip; Hinds, Jason; Butcher, Philip D; Barer, Michael R

Geographic information systems and genotyping in identification of rotavirus G12 infections in residents of an urban slum with subsequent detection in hospitalized children: emergence of G12 genotype in South India. (2007) Ramani, Sasirekha; Banerjee, Indrani; Gladstone, Beryl Primrose; Sarkar, Rajiv; Selvapandian, David; Le Fevre, Andrea M; Jaffar, Shabbar; Iturriza-Gomara, Miren; Gray, James J; Estes, Mary K; Brown, David W; Kang, Gagandeep

A Method for Amplicon Deep Sequencing of Drug Resistance Genes in Plasmodium falciparum Clinical Isolates from India. (2016) Rao, Pavitra N; Uplekar, Swapna; Kayal, Sriti; Mallick, Prashant K; Bandyopadhyay, Nabamita; Kale, Sonal; Singh, Om P; Mohanty, Akshaya; Mohanty, Sanjib; Wassmer, Samuel C; Carlton, Jane M

Genome-Based Analysis of Enterococcus faecium Bacteremia Associated with Recurrent and Mixed-Strain Infection. (2017) Raven, Kathy E; Gouliouris, Theodore; Parkhill, Julian; Peacock, Sharon J

Molecular diagnosis of leishmaniasis: current status and future applications. (2006) Reithinger, Richard; Dujardin, Jean-Claude

Evaluation of PCR as a diagnostic mass-screening tool to detect Leishmania (Viannia) spp. in domestic dogs (Canis familiaris). (2003) Reithinger, Richard; Espinoza, Juan Canales; Courtenay, Orin; Davies, Clive R

Rapid detection of Trypanosoma cruzi in human serum by use of an immunochromatographic dipstick test. (2010) Reithinger, Richard; Grijalva, Mario J; Chiriboga, Rosa F; de Noya, Belkisyolé Alarcón; Torres, Jaime R; Pavia-Ruz, Norma; Manrique-Saide, Pablo; Cardinal, Marta V; Gürtler, Ricardo E

Rapid detection of Leishmania infantum infection in dogs: comparative study using an immunochromatographic dipstick test, enzyme-linked immunosorbent assay, and PCR. (2002) Reithinger, Richard; Quinnell, Rupert J; Alexander, Bruce; Davies, Clive R

Development and evaluation of a next-generation digital PCR diagnostic assay for ocular Chlamydia trachomatis infections. (2013) Roberts, Chrissy H; Last, Anna; Molina-Gonzalez, Sandra; Cassama, Eunice; Butcher, Robert; Nabicassa, Meno; McCarthy, Elizabeth; Burr, Sarah E; Mabey, David C; Bailey, Robin L; Holland, Martin J

Real-time-PCR assay for diagnosis of Entamoeba histolytica infection. (2005) Roy, Shantanu; Kabir, Mamun; Mondal, Dinesh; Ali, Ibne Karim M; Petri, William A; Haque, Rashidul

As a bacterial culture medium, citrated sheep blood agar is a practical alternative to citrated human blood agar in laboratories of developing countries. (2006) Russell, FM; Biribo, SSN; Selvaraj, G; Oppedisano, F; Warren, S; Seduadua, A; Mulholland, EK; Carapetis, JR

Prevalence of Chlamydia trachomatis infection among low- and high-risk Filipino women and performance of Chlamydia rapid tests in resource-limited settings. (2007) Saison, Francis; Mahilum-Tapay, Lourdes; Michel, Claude-Edouard E; Buttress, Nigel D; Nadala, Elpidio Cesar B; Magbanua, Jose Paolo V; Harding-Esch, Emma M; Villaruel, M Odeta; Canong, Lorna; Celis, Rey L; Lee, Helen H

Optimal threshold for a positive hybrid capture 2 test for detection of human papillomavirus: data from the ARTISTIC trial. (2010) Sargent, A; Bailey, A; Turner, A; Almonte, M; Gilham, C; Baysson, H; Peto, J; Roberts, C; Thomson, C; Desai, M; Mather, J; Kitchener, H

Molecular epidemiology of Streptococcus pneumoniae serogroup 6 isolates from Fijian children, including newly identified serotypes 6C and 6D. (2010) Satzke, Catherine; Ortika, Belinda D; Oftadeh, Shahin; Russell, Fiona M; Robins-Browne, Roy M; Mulholland, E Kim; Gilbert, Gwendolyn L

Comparison of citrated human blood, citrated sheep blood, and defibrinated sheep blood Mueller-Hinton agar preparations for antimicrobial susceptibility testing of Streptococcus pneumoniae isolates. (2010) Satzke, Catherine; Seduadua, Anna; Chandra, Reginald; Carapetis, Jonathan R; Mulholland, E Kim; Russell, Fiona M

Diagnosis of pneumococcal pneumonia by psaA PCR analysis of lung aspirates from adult patients in Kenya. (2003) Scott, J Anthony G; Marston, Eric L; Hall, Andrew J; Marsh, Kevin

Sputum PCR-single-strand conformational polymorphism test for same-day detection of pyrazinamide resistance in tuberculosis patients. (2009) Sheen, Patricia; Méndez, Melissa; Gilman, Robert H; Peña, Lizeth; Caviedes, Luz; Zimic, Mirko J; Zhang, Ying; Moore, David AJ; Evans, Carlton A

Capsular Typing Method for Streptococcus agalactiae Using Whole-Genome Sequence Data. (2016) Sheppard, Anna E; Vaughan, Alison; Jones, Nicola; Turner, Paul; Turner, Claudia; Efstratiou, Androulla; Patel, Darshana; Modernising Medical Microbiology Informatics Group; Walker, A Sarah; Berkley, James A; Crook, Derrick W; Seale, Anna C

Shedding of Epstein-Barr virus and cytomegalovirus from the genital tract of women in a periurban community in Andhra Pradesh, India. (2011) Silver, Michelle I; Paul, Proma; Sowjanya, Pavani; Ramakrishna, Gayatri; Vedantham, Haripriya; Kalpana, Basany; Shah, Keerti V; Gravitt, Patti E

Pathogen chip for respiratory tract infections. (2013) Simões, Eric AF; Patel, Champa; Sung, Wing-Kin; Lee, Charlie WH; Loh, Kuan Hon; Lucero, Marilla; Nohynek, Hanna; Nai, Geraldine; Thien, Pei Ling; Koh, Chee Wee; Chan, Yang Sun; Ma, Jianmin; Maurer-Stroh, Sebastian; Carosone-Link, Phyllis; Hibberd, Martin L; Wong, Christopher W; ARIVAC Consortium

Optimizing outpatient serial sputum colony counting for studies of tuberculosis treatment in resource-poor settings. (2012) Sloan, Derek J; Corbett, Elizabeth L; Butterworth, Anthony E; Mwandumba, Henry C; Khoo, Saye H; Mdolo, Aaron; Shani, Doris; Kamdolozi, Mercy; Allen, Jenny; Mitchison, Denis A; Coleman, David J; Davies, Geraint R

Simple and rapid differentiation of Mycobacterium tuberculosis H37Ra from M. tuberculosis clinical isolates through two cytochemical tests using neutral red and nile blue stains. (2002) Soto, Carlos Y; Andreu, Núria; Gibert, Isidre; Luquin, Marina

Clonal spread of a vancomycin-resistant Enterococcus faecium strain among bloodstream-infecting isolates in Italy. (2005) Stampone, Lucia; Del Grosso, Maria; Boccia, Delia; Pantosti, Annalisa

Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses. (2015) Stoesser, N; Sheppard, AE; Moore, CE; Golubchik, T; Parry, CM; Nget, P; Saroeun, M; Day, NPJ; Giess, A; Johnson, JR; Peto, TEA; Crook, DW; Walker, AS; Modernizing Medical Microbiology Informatics Group

Type III secretion genes in Aeromonas salmonicida subsp salmonicida are located on a large thermolabile virulence plasmid. (2003) Stuber, Katja; Burr, Sarah E; Braun, Martin; Wahli, Thomas; Frey, Joachim

Genetic marker suitable for identification and genotyping of Plasmodium ovale curtisi and Plasmodium ovale wallikeri. (2013) Tanomsing, Naowarat; Imwong, Mallika; Sutherland, Colin J; Dolecek, Christiane; Hien, Tran Tinh; Nosten, Francois; Day, Nicholas PJ; White, Nicholas J; Snounou, Georges

Discrimination of human pathogenic subspecies of Francisella tularensis by using restriction fragment length polymorphism. (2003) Thomas, Rebecca; Johansson, Anders; Neeson, Brendan; Isherwood, Karen; Sjöstedt, Anders; Ellis, Jill; Titball, Richard W

Genetic Variation among Human Isolates of Uninucleated Cyst-Producing Entamoeba Species. (2001) Verweij, JJ; Polderman, AM; Clark, CG

Detection of Shigella by a PCR assay targeting the ipaH gene suggests increased prevalence of shigellosis in Nha Trang, Vietnam. (2004) Vu, Dinh Thiem; Sethabutr, Orntipa; Von Seidlein, Lorenz; Tran, Van Tung; Do, Gia Canh; Bui, Trong Chien; Le, Huu Tho; Lee, Hyejon; Houng, Huo-Shu; Hale, Thomas L; Clemens, John D; Mason, Carl; Dang, Duc Trach

Use of spoligotyping for accurate classification of recurrent tuberculosis. (2002) Warren, RM; Streicher, EM; Charalambous, S; Churchyard, G; van der Spuy, GD; Grant, AD; van Helden, PD; Victor, TC

Use of acyclovir for suppression of human immunodeficiency virus infection is not associated with genotypic evidence of herpes simplex virus type 2 resistance to acyclovir: analysis of specimens from three phase III trials. (2010) Watson-Jones, Deborah; Wald, Anna; Celum, Connie; Lingappa, Jairam; Weiss, Helen A; Changalucha, John; Baisley, Kathy; Tanton, Clare; Hayes, Richard J; Marshak, Joshua O; Gladden, Rula Green; Koelle, David M

hicap: In Silico Serotyping of the Haemophilus influenzae Capsule Locus. (2019) Watts, Stephen C; Holt, Kathryn E

Simplified PCR for detection of Haemophilus ducreyi and diagnosis of chancroid. (1995) West, B; Wilson, S.M; Changalucha, J; Patel, S; Mayaud, P; Ballard, RC; Mabey, DC

Pathotyping the Zoonotic Pathogen Streptococcus suis: Novel Genetic Markers To Differentiate Invasive Disease-Associated Isolates from Non-Disease-Associated Isolates from England and Wales. (2019) Wileman, Thomas M; Weinert, Lucy A; Howell, Kate J; Wang, Jinhong; Peters, Sarah E; Williamson, Susanna M; Wells, Jerry M; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Maskell, Duncan J; Tucker, Alexander W

Evaluation of a Rapid Diagnostic Test for Detection of Burkholderia pseudomallei in the Lao People's Democratic Republic. (2018) Woods, Kate L; Boutthasavong, Latsaniphone; NicFhogartaigh, Caoimhe; Lee, Sue J; Davong, Viengmon; AuCoin, David P; Dance, David AB

Transmission events within outbreaks of gastroenteritis determined through analysis of nucleotide sequences of the P2 domain of genogroup II noroviruses. (2008) Xerry, Jacqueline; Gallimore, Chris I; Iturriza-Gómara, Miren; Allen, David J; Gray, Jim J

Microsatellite mapping of Mycobacterium leprae populations in infected humans. (2004) Young, Saroj K; Taylor, G Michael; Jain, Suman; Suneetha, Lavanya M; Suneetha, Sujai; Lockwood, Diana NJ; Young, Douglas B

Isolation and characterization of polymorphic DNA from Entamoeba histolytica. (2001) Zaki, M; Clark, CG

Simultaneous differentiation and typing of Entamoeba histolytica and Entamoeba dispar. (2002) Zaki, Mehreen; Meelu, Parool; Sun, Wei; Clark, C Graham

Performance of commercially available enzyme immunoassays for detection of antibodies against herpes simplex virus type 2 in African populations. (2004) van Dyck, Eddy; Buvé, Anne; Weiss, Helen A; Glynn, Judith R; Brown, David WG; De Deken, Bénédicte; Parry, John; Hayes, Richard J

Conference or Workshop Item

Multilocus Sequence Typing of Streptococcus pneumoniae by Use of Mass Spectrometry (vol 49, pg 3756, 2011). (2013) Dunne, EileenM; Ong, EngKok; Moser, RalfJ; Siba, PeterM; Phuanukoonnon, Suparat; Greenhill, AndrewR; Robins-Browne, RoyM; Mulholland, EKim; Satzke, Catherine