LSHTM Organisational Structure (62716)

Faculty of Epidemiology and Population Health (28026)

Dept of Infectious Disease Epidemiology & Dynamics (2023-) (2640) Month Authors/Creators Item Type Full Text

Article

Estimating the duration of seropositivity of human seasonal coronaviruses using seroprevalence studies. (2021) Rees, Eleanor M; Waterlow, Naomi R; Lowe, Rachel; Kucharski, Adam J

Human papillomavirus vaccination in the European Union/European Economic Area and globally: a moral dilemma. (2021) Colzani, Edoardo; Johansen, Kari; Johnson, Helen; Pastore Celentano, Lucia

Linkage of Whole Genome Sequencing, Epidemiological, and Clinical Data to Understand the Genetic Diversity and Clinical Outcomes of Shigella flexneri among Men Who Have Sex with Men in England. (2021) Mitchell, Holly D; Thomson, Nicholas R; Jenkins, Claire; Dallman, Timothy J; Painset, Anaïs; Kirwan, Peter; Delpech, Valerie; Mikhail, Amy FW; Field, Nigel; Hughes, Gwenda

The silent and dangerous inequity around access to COVID-19 testing: A call to action. (2021) Batista, Carolina; Hotez, Peter; Amor, Yanis Ben; Kim, Jerome H; Kaslow, David; Lall, Bhavna; Ergonul, Onder; Figueroa, J Peter; Gursel, Mayda; Hassanain, Mazen; Kang, Gagandeep; Larson, Heidi; Naniche, Denise; Sheahan, Timothy; Wilder-Smith, Annelies; Shoham, Shmuel; Sow, Samba O; Yadav, Prashant; Strub-Wourgaft, Nathalie; Loveday, Sarah-Jane; Hannay, Emma; Bottazzi, Maria Elena

Changing socio-economic and ethnic disparities in influenza/A/H1N1 infection early in the 2009 UK epidemic: a descriptive analysis. (2021) Munday, James D; Pebody, Richard; Atkins, Katherine E; van Hoek, Albert Jan

Correction: Practical considerations for measuring the effective reproductive number, Rt. (2021) Gostic, Katelyn M; McGough, Lauren; Baskerville, Edward B; Abbott, Sam; Joshi, Keya; Tedijanto, Christine; Kahn, Rebecca; Niehus, Rene; Hay, James A; De Salazar, Pablo M; Hellewell, Joel; Meakin, Sophie; Munday, James D; Bosse, Nikos I; Sherrat, Katharine; Thompson, Robin N; White, Laura F; Huisman, Jana S; Scire, Jérémie; Bonhoeffer, Sebastian; Stadler, Tanja; Wallinga, Jacco; Funk, Sebastian; Lipsitch, Marc; Cobey, Sarah picture_as_pdf

The impact of climate suitability, urbanisation, and connectivity on the expansion of dengue in 21st century Brazil. (2021) Lee, Sophie A; Economou, Theodoros; de Castro Catão, Rafael; Barcellos, Christovam; Lowe, Rachel

Tracking the emergence of disparities in the subnational spread of COVID-19 in Brazil using an online application for real-time data visualisation: A longitudinal analysis. (2021) Mee, Paul; Alexander, Neal; Mayaud, Philippe; González, Felipe de Jesus Colón; Abbott, Sam; Santos, Andreza Aruska de Souza; Acosta, André Luís; Parag, Kris V; Pereira, Rafael HM; Prete, Carlos A; Sabino, Ester C; Faria, Nuno R; LSHTM Centre for Mathematical Modelling of Infectious Disease CO; Brady, Oliver J

The importance of saturating density dependence for population-level predictions of SARS-CoV-2 resurgence compared with density-independent or linearly density-dependent models, England, 23 March to 31 July 2020. (2021) Nightingale, Emily S; Brady, Oliver J; CMMID Covid-19 working group; Yakob, Laith

Estimating the number of undetected COVID-19 cases among travellers from mainland China. (2021) Bhatia, Sangeeta; Imai, Natsuko; Cuomo-Dannenburg, Gina; Baguelin, Marc; Boonyasiri, Adhiratha; Cori, Anne; Cucunubá, Zulma; Dorigatti, Ilaria; FitzJohn, Rich; Fu, Han; Gaythorpe, Katy; Ghani, Azra; Hamlet, Arran; Hinsley, Wes; Laydon, Daniel; Nedjati-Gilani, Gemma; Okell, Lucy; Riley, Steven; Thompson, Hayley; van Elsland, Sabine; Volz, Erik; Wang, Haowei; Wang, Yuanrong; Whittaker, Charles; Xi, Xiaoyue; Donnelly, Christl A; Ferguson, Neil M

Risk scores for predicting HIV incidence among adult heterosexual populations in sub-Saharan Africa: a systematic review and meta-analysis. (2021) Jia, Katherine M; Eilerts, Hallie; Edun, Olanrewaju; Lam, Kevin; Howes, Adam; Thomas, Matthew L; Eaton, Jeffrey W

Choice of antibiotics for prophylaxis of bacterial STIs among individuals currently self-sourcing. (2021) Kohli, Manik; Reid, David; Pulford, Caisey V; Howarth, Alison; Brown, Jack; Mohammed, Hamish; Hughes, Gwenda; Mercer, Catherine H; Saunders, John

Co-learning during the co-creation of a dengue early warning system for the health sector in Barbados. (2021) Stewart-Ibarra, Anna M; Rollock, Leslie; Best, Sabu; Brown, Tia; Diaz, Avriel R; Dunbar, Willy; Lippi, Catherine A; Mahon, Roché; Ryan, Sadie J; Trotman, Adrian; Van Meerbeeck, Cedric J; Lowe, Rachel

Spatial variation in time to diagnosis of visceral leishmaniasis in Bihar, India. (2021) Nightingale, Emily S; Bindroo, Joy; Dubey, Pushkar; Priyamvada, Khushbu; Das, Aritra; Bern, Caryn; Srikantiah, Sridhar; Kumar, Ashok; Cameron, Mary M; Lucas, Tim CD; Sharma, Sadhana; Medley, Graham F; Brady, Oliver J

Stark choices: exploring health sector costs of policy responses to COVID-19 in low-income and middle-income countries. (2021) Torres-Rueda, Sergio; Sweeney, Sedona; Bozzani, Fiammetta; Naylor, Nichola R; Baker, Tim; Pearson, Carl; Eggo, Rosalind; Procter, Simon R; Davies, Nicholas; Quaife, Matthew; Kitson, Nichola; Keogh-Brown, Marcus R; Jensen, Henning Tarp; Saadi, Nuru; Khan, Mishal; Huda, Maryam; Kairu, Angela; Zaidi, Raza; Barasa, Edwine; Jit, Mark; Vassall, Anna

How immunity from and interaction with seasonal coronaviruses can shape SARS-CoV-2 epidemiology. (2021) Waterlow, Naomi R; van Leeuwen, Edwin; Davies, Nicholas G; CMMID COVID-19 Working Group; Flasche, Stefan; Eggo, Rosalind M

Global phylogeny of Treponema pallidum lineages reveals recent expansion and spread of contemporary syphilis. (2021) Beale, Mathew A; Marks, Michael; Cole, Michelle J; Lee, Min-Kuang; Pitt, Rachel; Ruis, Christopher; Balla, Eszter; Crucitti, Tania; Ewens, Michael; Fernández-Naval, Candela; Grankvist, Anna; Guiver, Malcolm; Kenyon, Chris R; Khairullin, Rafil; Kularatne, Ranmini; Arando, Maider; Molini, Barbara J; Obukhov, Andrey; Page, Emma E; Petrovay, Fruzsina; Rietmeijer, Cornelis; Rowley, Dominic; Shokoples, Sandy; Smit, Erasmus; Sweeney, Emma L; Taiaroa, George; Vera, Jaime H; Wennerås, Christine; Whiley, David M; Williamson, Deborah A; Hughes, Gwenda; Naidu, Prenilla; Unemo, Magnus; Krajden, Mel; Lukehart, Sheila A; Morshed, Muhammad G; Fifer, Helen; Thomson, Nicholas R

Frequency and Correlates of Mycoplasma genitalium Antimicrobial Resistance Mutations and Their Association With Treatment Outcomes: Findings From a National Sentinel Surveillance Pilot in England. (2021) Fifer, Helen; Merrick, Rachel; Pitt, Rachel; Yung, Mandy; Allen, Hester; Day, Michaela; Sinka, Katy; Woodford, Neil; Mohammed, Hamish; Brown, Colin S; Hughes, Gwenda; Cole, Michelle; MARS Collaborators Group

The Impact of Cocirculating Pathogens on Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/Coronavirus Disease 2019 Surveillance: How Concurrent Epidemics May Introduce Bias and Decrease the Observed SARS-CoV-2 Percentage Positivity. (2021) Kovacevic, Aleksandra; Eggo, Rosalind M; Baguelin, Marc; Domenech de Cellès, Matthieu; Opatowski, Lulla

Lifetime burden of disease due to incident tuberculosis: a global reappraisal including post-tuberculosis sequelae. (2021) Menzies, Nicolas A; Quaife, Matthew; Allwood, Brian W; Byrne, Anthony L; Coussens, Anna K; Harries, Anthony D; Marx, Florian M; Meghji, Jamilah; Pedrazzoli, Debora; Salomon, Joshua A; Sweeney, Sedona; van Kampen, Sanne C; Wallis, Robert S; Houben, Rein MGJ; Cohen, Ted

The One Health approach to incident management of the 2019 Lassa fever outbreak response in Nigeria. (2021) Nwafor, Chioma Dan; Ilori, Elsie; Olayinka, Adebola; Ochu, Chinwe; Olorundare, Rosemary; Edeh, Edwin; Okwor, Tochi; Oyebanji, Oyeronke; Namukose, Esther; Ukponu, Winifred; Olugbile, Michael; Adekanye, Usman; Chandra, Nastassya; Bolt, Hikaru; Namara, Geofrey; Ipadeola, Oladipupo; Furuse, Yuki; Woldetsadik, Solomon; Akano, Adejoke; Iniobong, Akanimo; Amedu, Michael; Anueyiagu, Chimezie; Bakare, Lawal; Ahumibe, Anthony; Joseph, Gbenga; Eneh, Chibuzo; Saleh, Muhammad; Dhamari, Naidoo; Okoli, Ihekerenma; Kachalla, Mairo; Okea, Rita; Okenyi, Collins; Makava, Favour; Makwe, Catherine; Ugbogulu, Nkem; Fonkeng, Fritz; Aniaku, Everistus; Agogo, Emmanuel; Mba, Nwando; Aruna, Olusola; Nguku, Patrick; Ihekweazu, Chikwe

Models of COVID-19 vaccine prioritisation: a systematic literature search and narrative review. (2021) Saadi, Nuru; Chi, Y-Ling; Ghosh, Srobana; Eggo, Rosalind M; McCarthy, Ciara V; Quaife, Matthew; Dawa, Jeanette; Jit, Mark; Vassall, Anna

The effect of new Mycobacterium tuberculosis infection on the sensitivity of prognostic TB signatures. (2021) Sumner, T; Fiore-Gartland, A; Hatherill, M; Houben, RMGJ; Scriba, TJ; White, RG

Economic Evaluation of Community Tuberculosis Active Case-Finding Approaches in Cambodia: A Quasi-Experimental Study. (2021) Teo, Alvin Kuo Jing; Prem, Kiesha; Wang, Yi; Pande, Tripti; Smelyanskaya, Marina; Gerstel, Lisanne; Chry, Monyrath; Tuot, Sovannary; Yi, Siyan

Estimating the contribution of HIV-infected adults to household pneumococcal transmission in South Africa, 2016-2018: A hidden Markov modelling study. (2021) Thindwa, Deus; Wolter, Nicole; Pinsent, Amy; Carrim, Maimuna; Ojal, John; Tempia, Stefano; Moyes, Jocelyn; McMorrow, Meredith; Kleynhans, Jackie; Gottberg, Anne von; French, Neil; PHIRST group; Cohen, Cheryl; Flasche, Stefan

Genomic epidemiology of persistently circulating MDR Shigella sonnei strains associated with men who have sex with men (MSM) in Belgium (2013-19). (2021) Fischer, Natalie; Maex, Margo; Mattheus, Wesley; Van den Bossche, An; Van Cauteren, Dieter; Laisnez, Valeska; Hammami, Naïma; Ceyssens, Pieter-Jan

Effect of evidence updates on key determinants of measles vaccination impact: a DynaMICE modelling study in ten high-burden countries. (2021) Fu, Han; Abbas, Kaja; Klepac, Petra; van Zandvoort, Kevin; Tanvir, Hira; Portnoy, Allison; Jit, Mark

Real-Time Projections of SARS-CoV-2 B.1.1.7 Variant in a University Setting, Texas, USA. (2021) Johnson, Kaitlyn E; Woody, Spencer; Lachmann, Michael; Fox, Spencer J; Klima, Jessica; Hines, Terrance S; Meyers, Lauren Ancel

SARS-CoV-2 infection risk during delivery of childhood vaccination campaigns: a modelling study. (2021) Procter, Simon R; Abbas, Kaja; Flasche, Stefan; Griffiths, Ulla; Hagedorn, Brittany; O'Reilly, Kathleen M; CMMID COVID-19 Working Group; Jit, Mark

Optimising health and economic impacts of COVID-19 vaccine prioritisation strategies in the WHO European Region: a mathematical modelling study. (2021) Liu, Yang; Sandmann, Frank G; Barnard, Rosanna C; Pearson, Carl AB; Pastore, Roberta; Pebody, Richard; Flasche, Stefan; Jit, Mark

Effectiveness of infection prevention and control interventions, excluding personal protective equipment, to prevent nosocomial transmission of SARS-CoV-2: a systematic review and call for action. (2021) Jafari, Yalda; Yin, Mo; Lim, Cherry; Pople, Diane; Evans, Stephanie; Stimson, James; Pham, Thi Mui; LSHTM CMMID COVID-19 working group; Read, Jonathan M; Robotham, Julie V; Cooper, Ben S; Knight, Gwenan M

Impact of parental divorce versus separation due to migration on mental health and self-injury of Chinese children: a cross sectional survey. (2021) Wang, Feng; Lu, Jingjing; Lin, Leesa; Cai, Jingjing; Xu, Jiayao; Zhou, Xudong

Epidemiology of Extended-Spectrum Beta-Lactamase and Carbapenemase-Producing Enterobacterales in the Greater Mekong Subregion: A Systematic-Review and Meta-Analysis of Risk Factors Associated With Extended-Spectrum Beta-Lactamase and Carbapenemase Isolation. (2021) Singh, Shweta R; Teo, Alvin Kuo Jing; Prem, Kiesha; Ong, Rick Twee-Hee; Ashley, Elizabeth A; van Doorn, H Rogier; Limmathurotsakul, Direk; Turner, Paul; Hsu, Li Yang

World Health Organization Expert Working Group: Recommendations for assessing morbidity associated with enteric pathogens. (2021) Hasso-Agopsowicz, Mateusz; Lopman, Benjamin A; Lanata, Claudio F; Rogawski McQuade, Elizabeth T; Kang, Gagandeep; Prudden, Holly J; Khalil, Ibrahim; Platts-Mills, James A; Kotloff, Karen; Jit, Mark; Riddle, Mark S; Pavlinac, Patricia B; Luz, Paula M; Pitzer, Virginia E; Breiman, Robert F; Giersing, Birgitte K

High SARS-CoV-2 Seroprevalence in Rural Peru, 2021: a Cross-Sectional Population-Based Study. (2021) Moreira-Soto, Andres; Pachamora Diaz, Johanna Maribel; González-Auza, Lilian; Merino Merino, Xiomara Jeanleny; Schwalb, Alvaro; Drosten, Christian; Gotuzzo, Eduardo; Talledo, Michael; Arévalo Ramirez, Heriberto; Peralta Delgado, Roxana; Bocanegra Vargas, Spassky; Drexler, Jan Felix

Early career psychiatrists advocate reorientation not redeployment for COVID-19 care. (2021) Alkasaby, Muhammad Abdullaitf; Philip, Sharad; Agrawal, Aditi; Jakhar, Jitender; Ojeahere, Margaret Isioma; Ori, Dorottya; Ransing, Ramdas; Saeed, Fahimeh; Mohammadreza, Shalbafan; Shoib, Sheikh; El Halabi, Sarah; Solerdelcoll, Mireia; Pereira-Sanchez, Victor; Pinto da Costa, Mariana

Predictors of stress among a sample of Egyptian healthcare providers during the COVID-19 pandemic. (2021) Shaker, Nermin Mahmoud; Sabry, Noha; Alkasaby, Muhammad Abdullatif; Rabie, Menan

Within and between classroom transmission patterns of seasonal influenza among primary school students in Matsumoto city, Japan. (2021) Endo, Akira; Uchida, Mitsuo; Hayashi, Naoki; Liu, Yang; Atkins, Katherine E; Kucharski, Adam J; Funk, Sebastian

OpenSAFELY: impact of national guidance on switching anticoagulant therapy during COVID-19 pandemic. (2021) OpenSAFELY Collaborative; Curtis, Helen J; MacKenna, Brian; Walker, Alex J; Croker, Richard; Mehrkar, Amir; Morton, Caroline; Bacon, Seb; Hickman, George; Inglesby, Peter; Bates, Chris; Evans, David; Ward, Tom; Cockburn, Jonathan; Davy, Simon; Bhaskaran, Krishnan; Schultze, Anna; Rentsch, Christopher T; Williamson, Elizabeth; Hulme, William; Tomlinson, Laurie; Mathur, Rohini; Drysdale, Henry; Eggo, Rosalind M; Wong, Angel Yun; Forbes, Harriet; Parry, John; Hester, Frank; Harper, Sam; Douglas, Ian; Smeeth, Liam; Goldacre, Ben

Fluoroquinolone susceptibility in first-line drug-susceptible M. tuberculosis isolates in Lima, Peru. (2021) Schwalb, Alvaro; Cachay, Rodrigo; Meza, Ericka; Cáceres, Tatiana; Blackman, Amondrea; Maruri, Fernanda; Sterling, Timothy R; Gotuzzo, Eduardo

Vaccine Confidence and Hesitancy at the Start of COVID-19 Vaccine Deployment in the UK: An Embedded Mixed-Methods Study. (2021) Roberts, Chrissy H; Brindle, Hannah; Rogers, Nina T; Eggo, Rosalind M; Enria, Luisa; Lees, Shelley

Durations of asymptomatic, symptomatic, and care-seeking phases of tuberculosis disease with a Bayesian analysis of prevalence survey and notification data. (2021) Ku, Chu-Chang; MacPherson, Peter; Khundi, McEwen; Nzawa Soko, Rebecca H; Feasey, Helena RA; Nliwasa, Marriott; Horton, Katherine C; Corbett, Elizabeth L; Dodd, Peter J

Evaluation of implementation and effectiveness of digital adherence technology with differentiated care to support tuberculosis treatment adherence and improve treatment outcomes in Ethiopia: a study protocol for a cluster randomised trial. (2021) Tadesse, Amare W; Mohammed, Zemedu; Foster, Nicola; Quaife, Matthew; McQuaid, Christopher Finn; Levy, Jens; van Kalmthout, Kristian; van Rest, Job; Jerene, Degu; Abdurhman, Tofik; Yazew, Hiwot; Umeta, Demekech G; Assefa, Demelash; Weldemichael, Gedion T; Bedru, Ahmed; Letta, Taye; Fielding, Katherine L

How can the public health impact of vaccination be estimated? (2021) Echeverria-Londono, Susy; Li, Xiang; Toor, Jaspreet; de Villiers, Margaret J; Nayagam, Shevanthi; Hallett, Timothy B; Abbas, Kaja; Jit, Mark; Klepac, Petra; Jean, Kévin; Garske, Tini; Ferguson, Neil M; Gaythorpe, Katy AM

Predicted norovirus resurgence in 2021-2022 due to the relaxation of nonpharmaceutical interventions associated with COVID-19 restrictions in England: a mathematical modeling study. (2021) O'Reilly, Kathleen M; Sandman, Frank; Allen, David; Jarvis, Christopher I; Gimma, Amy; Douglas, Amy; Larkin, Lesley; Wong, Kerry LM; Baguelin, Marc; Baric, Ralph S; Lindesmith, Lisa C; Goldstein, Richard A; Breuer, Judith; Edmunds, W John

Quantifying the Acute Care Costs of Neonatal Bacterial Sepsis and Meningitis in Mozambique and South Africa. (2021) Aerts, Céline; Leahy, Shannon; Mucasse, Humberto; Lala, Sanjay; Bramugy, Justina; Tann, Cally J; Madhi, Shabir A; Bardají, Azucena; Bassat, Quique; Dangor, Ziyaad; Lawn, Joy E; Jit, Mark; Procter, Simon R

Optimal human papillomavirus vaccination strategies to prevent cervical cancer in low-income and middle-income countries in the context of limited resources: a mathematical modelling analysis. (2021) Drolet, Mélanie; Laprise, Jean-François; Martin, Dave; Jit, Mark; Bénard, Élodie; Gingras, Guillaume; Boily, Marie-Claude; Alary, Michel; Baussano, Iacopo; Hutubessy, Raymond; Brisson, Marc

Projections of human papillomavirus (HPV) vaccination impact in Ethiopia, India, Nigeria and Pakistan: a comparative modelling study. (2021) Portnoy, Allison; Abbas, Kaja; Sweet, Steven; Kim, Jane J; Jit, Mark

Tracking progress on health and climate change in Europe. (2021) Romanello, Marina; van Daalen, Kim; Anto, Josep M; Dasandi, Niheer; Drummond, Paul; Hamilton, Ian G; Jankin, Slava; Kendrovski, Vladimir; Lowe, Rachel; Rocklöv, Joacim; Schmoll, Oliver; Semenza, Jan C; Tonne, Cathryn; Nilsson, Maria

Epidemiological and Immunological Features of Obesity and SARS-CoV-2. (2021) Nilles, Eric J; Siddiqui, Sameed M; Fischinger, Stephanie; Bartsch, Yannic C; de St. Aubin, Michael; Zhou, Guohai; Gluck, Matthew J; Berger, Samuel; Rhee, Justin; Petersen, Eric; Mormann, Benjamin; Loesche, Michael; Hu, Yiyuan; Chen, Zhilin; Yu, Jingyou; Gebre, Makda; Atyeo, Caroline; Gorman, Matthew J; Zhu, Alex Lee; Burke, John; Slein, Matthew; Hasdianda, Mohammad A; Jambaulikar, Guruprasad; Boyer, Edward W; Sabeti, Pardis C; Barouch, Dan H; Julg, Boris; Kucharski, Adam J; Musk, Elon R; Lauffenburger, Douglas A; Alter, Galit; Menon, Anil S

COVID-19 in Children with Down Syndrome: Data from the Trisomy 21 Research Society Survey. (2021) Emes, David; Hüls, Anke; Baumer, Nicole; Dierssen, Mara; Puri, Shiela; Russell, Lauren; Sherman, Stephanie L; Strydom, Andre; Bargagna, Stefania; Brandão, Ana Cláudia; Costa, Alberto CS; Feany, Patrick T; Chicoine, Brian Allen; Ghosh, Sujay; Rebillat, Anne-Sophie; Sgandurra, Giuseppina; Valentini, Diletta; Rohrer, Tilman R; Levin, Johannes; Lakhanpaul, Monica; On Behalf Of The Trisomy Research Society Covid-Initiative Study

A snapshot of the practicality and barriers to COVID-19 interventions: Public health and healthcare workers' perceptions in high and low- and middle-income countries. (2021) Glazik, Rosanna; Moore, Hannah; Kennedy, David; Bower, Hilary; Rohan, Hana; Sharp, Ashley; Seale, Anna C

Mosquito abundance in relation to extremely high temperatures in urban and rural areas of Incheon Metropolitan City, South Korea from 2015 to 2020: an observational study. (2021) Lim, Ah-Young; Cheong, Hae-Kwan; Chung, Yeonseung; Sim, Kisung; Kim, Jong-Hun

The impact of blood transcriptomic biomarker targeted tuberculosis preventive therapy in people living with HIV: a mathematical modelling study. (2021) Sumner, Tom; Mendelsohn, Simon C; Scriba, Thomas J; Hatherill, Mark; White, Richard G

Sociological variety and the transmission efficiency of Mycobacterium tuberculosis: a secondary analysis of qualitative and quantitative data from 15 communities in Zambia. (2021) Murray, Emma J; Dodd, Peter J; Marais, Ben; Ayles, Helen; Shanaube, Kwame; Schaap, Albertus; White, Richard G; Bond, Virginia

Modelling the effect of infection prevention and control measures on rate of Mycobacterium tuberculosis transmission to clinic attendees in primary health clinics in South Africa. (2021) McCreesh, Nicky; Karat, Aaron S; Baisley, Kathy; Diaconu, Karin; Bozzani, Fiammetta; Govender, Indira; Beckwith, Peter; Yates, Tom A; Deol, Arminder K; Houben, Rein MGJ; Kielmann, Karina; White, Richard G; Grant, Alison D

Drivers of global media attention and representations for antimicrobial resistance risk: an analysis of online English and Chinese news media data, 2015-2018. (2021) Liao, Qiuyan; Yuan, Jiehu; Dong, Meihong; Paterson, Pauline; Lam, Wendy Wing Tak

Correction to: Epidemiological and clinical characteristics of patients with suspected COVID-19 admitted in Metro Manila, Philippines. (2021) Salva, Eumelia P; Villarama, Jose Benito; Lopez, Edmundo B; Sayo, Ana Ria; Villanueva, Annavi Marie G; Edwards, Tansy; Han, Su Myat; Suzuki, Shuichi; Seposo, Xerxes; Ariyoshi, Koya; Smith, Chris

Impact of COVID-19 Disruptions on Global BCG Coverage and Paediatric TB Mortality: A Modelling Study. (2021) Shaikh, Nabila; Pelzer, Puck T; Thysen, Sanne M; Roy, Partho; Harris, Rebecca C; White, Richard G

Emergence of novel strains of Shigella flexneri associated with sexual transmission in adult men in England, 2019-2020. (2021) Dallman, Timothy J; Charles, Hannah; Prochazka, Mateo; Sinka, Katy; Hughes, Gwenda; Godbole, Gauri; Jenkins, Claire

Association between warfarin and COVID-19-related outcomes compared with direct oral anticoagulants: population-based cohort study. (2021) OpenSAFELY Collaborative; Wong, Angel YS; Tomlinson, Laurie A; Brown, Jeremy P; Elson, William; Walker, Alex J; Schultze, Anna; Morton, Caroline E; Evans, David; Inglesby, Peter; MacKenna, Brian; Bhaskaran, Krishnan; Rentsch, Christopher T; Powell, Emma; Williamson, Elizabeth; Croker, Richard; Bacon, Seb; Hulme, William; Bates, Chris; Curtis, Helen J; Mehrkar, Amir; Cockburn, Jonathan; McDonald, Helen I; Mathur, Rohini; Wing, Kevin; Forbes, Harriet; Eggo, Rosalind M; Evans, Stephen JW; Smeeth, Liam; Goldacre, Ben; Douglas, Ian J

Recommended reporting items for epidemic forecasting and prediction research: The EPIFORGE 2020 guidelines. (2021) Pollett, Simon; Johansson, Michael A; Reich, Nicholas G; Brett-Major, David; Del Valle, Sara Y; Venkatramanan, Srinivasan; Lowe, Rachel; Porco, Travis; Berry, Irina Maljkovic; Deshpande, Alina; Kraemer, Moritz UG; Blazes, David L; Pan-Ngum, Wirichada; Vespigiani, Alessandro; Mate, Suzanne E; Silal, Sheetal P; Kandula, Sasikiran; Sippy, Rachel; Quandelacy, Talia M; Morgan, Jeffrey J; Ball, Jacob; Morton, Lindsay C; Althouse, Benjamin M; Pavlin, Julie; van Panhuis, Wilbert; Riley, Steven; Biggerstaff, Matthew; Viboud, Cecile; Brady, Oliver; Rivers, Caitlin

Climate change and health in Southeast Asia – defining research priorities and the role of the Wellcome Trust Africa Asia Programmes. (2021) Choisy, Marc; McBride, Angela; Chambers, Mary; Ho Quang, Chanh; Nguyen Quang, Huy; Xuan Chau, Nguyen Thi; Thi, Giang Nguyen; Bonell, Ana; Evans, Megan; Ming, Damien; Ngo-Duc, Thanh; Quang Thai, Pham; Dang Giang, Duy Hoang; Dan Thanh, Ho Ngoc; Ngoc Nhung, Hoang; Lowe, Rachel; Maude, Richard; Elyazar, Iqbal; Surendra, Henry; Ashley, Elizabeth A; Thwaites, Louise; van Doorn, H Rogier; Kestelyn, Evelyne; Dondorp, Arjen M; Thwaites, Guy; Vinh Chau, Nguyen Van; Yacoub, Sophie

Genomic reconstruction of the SARS-CoV-2 epidemic in England. (2021) Vöhringer, Harald S; Sanderson, Theo; Sinnott, Matthew; De Maio, Nicola; Nguyen, Thuy; Goater, Richard; Schwach, Frank; Harrison, Ian; Hellewell, Joel; Ariani, Cristina V; Gonçalves, Sonia; Jackson, David K; Johnston, Ian; Jung, Alexander W; Saint, Callum; Sillitoe, John; Suciu, Maria; Goldman, Nick; Panovska-Griffiths, Jasmina; Wellcome Sanger Institute COVID-19 Surveillance Team; COVID-19 Genomics UK (COG-UK) Consortium*; Birney, Ewan; Volz, Erik; Funk, Sebastian; Kwiatkowski, Dominic; Chand, Meera; Martincorena, Inigo; Barrett, Jeffrey C; Gerstung, Moritz

A cross-sectional analysis of meteorological factors and SARS-CoV-2 transmission in 409 cities across 26 countries. (2021) Sera, Francesco; Armstrong, Ben; Abbott, Sam; Meakin, Sophie; O'Reilly, Kathleen; von Borries, Rosa; Schneider, Rochelle; Royé, Dominic; Hashizume, Masahiro; Pascal, Mathilde; Tobias, Aurelio; Vicedo-Cabrera, Ana Maria; MCC Collaborative Research Network; CMMID COVID-19 Working Group; Gasparrini, Antonio; Lowe, Rachel

Learning from each other in the COVID-19 pandemic. (2021) Seale, Anna C; Ibeto, Maryirene; Gallo, Josie; le Polain de Waroux, Olivier; Glynn, Judith R; Fogarty, Jenny

Multi-country collaboration in responding to global infectious disease threats: lessons for Europe from the COVID-19 pandemic. (2021) Jit, Mark; Ananthakrishnan, Aparna; McKee, Martin; Wouters, Olivier J; Beutels, Philippe; Teerawattananon, Yot

Sharing, synthesis and sustainability of data analysis for epidemic preparedness in Europe. (2021) Kucharski, Adam J; Hodcroft, Emma B; Kraemer, Moritz UG

Understanding MRSA clonal competition within a UK hospital; the possible importance of density dependence. (2021) de Vos, Anneke S; de Vlas, Sake J; Lindsay, Jodi A; Kretzschmar, Mirjam EE; Knight, Gwenan M

COVID-19 vaccination in Sindh Province, Pakistan: A modelling study of health impact and cost-effectiveness. (2021) Pearson, Carl AB; Bozzani, Fiammetta; Procter, Simon R; Davies, Nicholas G; Huda, Maryam; Jensen, Henning Tarp; Keogh-Brown, Marcus; Khalid, Muhammad; Sweeney, Sedona; Torres-Rueda, Sergio; CHiL COVID-19 Working Group; CMMID COVID-19 Working Group; Eggo, Rosalind M; Vassall, Anna; Jit, Mark

Association of enteropathogen detection with diarrhoea by age and high versus low child mortality settings: a systematic review and meta-analysis. (2021) Baker, Julia M; Hasso-Agopsowicz, Mateusz; Pitzer, Virginia E; Platts-Mills, James A; Peralta-Santos, Andre; Troja, Catherine; Archer, Helena; Guo, Boya; Sheahan, William; Lingappa, Jairam; Jit, Mark; Lopman, Benjamin A

High-throughput low-cost nl-qPCR for enteropathogen detection: A proof-of-concept among hospitalized patients in Bangladesh. (2021) Flaherty, Katelyn E; Grembi, Jessica A; Ramachandran, Vasavi V; Haque, Farhana; Khatun, Selina; Rahman, Mahmudu; Maples, Stace; Becker, Torben K; Spormann, Alfred M; Schoolnik, Gary K; Hryckowian, Andrew J; Nelson, Eric J

Implementing Serosurveys in India: Experiences, Lessons Learned, and Recommendations. (2021) Hasan, Alvira Z; Kumar, Muthusamy Santhosh; Prosperi, Christine; Thangaraj, Jeromie Wesley Vivian; Sabarinathan, R; Saravanakumar, V; Duraiswamy, Augustine; Kaduskar, Ojas; Bhatt, Vaishali; Deshpande, Gururaj Rao; Ullas, Padinjaremattathil Thankappan; Sapkal, Gajanan N; Sangal, Lucky; Mehendale, Sanjay M; Gupta, Nivedita; Moss, William J; Hayford, Kyla; Murhekar, Manoj V; IMRVI Study Group

Digital and technological innovation in vector-borne disease surveillance to predict, detect, and control climate-driven outbreaks. (2021) Pley, Caitlin; Evans, Megan; Lowe, Rachel; Montgomery, Hugh; Yacoub, Sophie

Rapid Increase in Lymphogranuloma Venereum among HIV-Negative Men Who Have Sex with Men, England, 2019. (2021) Prochazka, Mateo; Charles, Hannah; Allen, Hester; Cole, Michelle; Hughes, Gwenda; Sinka, Katy

How to Prevent Vaccines Falling Victim to Their Own Success: Intertemporal Dependency of Incidence Levels on Indirect Effects in Economic Reevaluations. (2021) Sandmann, Frank; Ramsay, Mary; Edmunds, W John; Choi, Yoon H; Jit, Mark

Estimating the annual dengue force of infection from the age of reporting primary infections across urban centres in endemic countries. (2021) Biggs, Joseph R; Sy, Ava Kristy; Sherratt, Katharine; Brady, Oliver J; Kucharski, Adam J; Funk, Sebastian; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Avelino, Ferchito L; Sucaldito, Nemia L; Tandoc, Amado O; la Paz, Eva Cutiongco-de; Capeding, Maria Rosario Z; Padilla, Carmencita D; Hafalla, Julius Clemence R; Hibberd, Martin L

Strategies to reduce the risk of SARS-CoV-2 importation from international travellers: modelling estimations for the United Kingdom, July 2020. (2021) Clifford, Samuel; Quilty, Billy J; Russell, Timothy W; Liu, Yang; Chan, Yung-Wai D; Pearson, Carl AB; Eggo, Rosalind M; Endo, Akira; CMMID COVID-19 Working Group; Flasche, Stefan; Edmunds, W John; Centre for Mathematical Modelling of Infectious Diseases (CMMID)

SOCRATES-CoMix: a platform for timely and open-source contact mixing data during and in between COVID-19 surges and interventions in over 20 European countries. (2021) Verelst, Frederik; Hermans, Lisa; Vercruysse, Sarah; Gimma, Amy; Coletti, Pietro; Backer, Jantien A; Wong, Kerry LM; Wambua, James; van Zandvoort, Kevin; Willem, Lander; Bogaardt, Laurens; Faes, Christel; Jarvis, Christopher I; Wallinga, Jacco; Edmunds, W John; Beutels, Philippe; Hens, Niel

Drug resistance mutations in HIV: new bioinformatics approaches and challenges. (2021) Blassel, Luc; Zhukova, Anna; Villabona-Arenas, Christian J; Atkins, Katherine E; Hué, Stéphane; Gascuel, Olivier

Trends and clinical characteristics of COVID-19 vaccine recipients: a federated analysis of 57.9 million patients’ primary care records in situ using OpenSAFELY. (2021) Curtis, Helen J; Inglesby, Peter; Morton, Caroline E; MacKenna, Brian; Green, Amelia; Hulme, William; Walker, Alex J; Morley, Jessica; Mehrkar, Amir; Bacon, Seb; Hickman, George; Bates, Chris; Croker, Richard; Evans, David; Ward, Tom; Cockburn, Jonathan; Davy, Simon; Bhaskaran, Krishnan; Schultze, Anna; Rentsch, Christopher T; Williamson, Elizabeth J; Rowan, Anna; Fisher, Louis; McDonald, Helen I; Tomlinson, Laurie; Mathur, Rohini; Drysdale, Henry; Eggo, Rosalind M; Wing, Kevin; Wong, Angel Ys; Forbes, Harriet; Parry, John; Hester, Frank; Harper, Sam; O'Hanlon, Shaun; Eavis, Alex; Jarvis, Richard; Avramov, Dima; Griffiths, Paul; Fowles, Aaron; Parkes, Nasreen; Douglas, Ian J; Evans, Stephen Jw; Smeeth, Liam; Goldacre, Ben; (The OpenSAFELY Collaborative)

OpenSAFELY NHS Service Restoration Observatory 1: primary care clinical activity in England during the first wave of COVID-19. (2021) Curtis, Helen J; MacKenna, Brian; Croker, Richard; Inglesby, Peter; Walker, Alex J; Morley, Jessica; Mehrkar, Amir; Morton, Caroline E; Bacon, Seb; Hickman, George; Bates, Chris; Evans, David; Ward, Tom; Cockburn, Jonathan; Davy, Simon; Bhaskaran, Krishnan; Schultze, Anna; Rentsch, Christopher T; Williamson, Elizabeth J; Hulme, William J; McDonald, Helen I; Tomlinson, Laurie; Mathur, Rohini; Drysdale, Henry; Eggo, Rosalind M; Wing, Kevin; Wong, Angel Ys; Forbes, Harriet; Parry, John; Hester, Frank; Harper, Sam; Evans, Stephen Jw; Douglas, Ian J; Smeeth, Liam; Goldacre, Ben; (The OpenSAFELY Collaborative)

COVID-19 Vaccine Uptake Among Residents and Staff Members of Assisted Living and Residential Care Communities-Pharmacy Partnership for Long-Term Care Program, December 2020-April 2021. (2021) Gharpure, Radhika; Yi, Sarah H; Li, Ruoran; Jacobs Slifka, Kara M; Tippins, Ashley; Jaffe, Aaron; Guo, Angela; Kent, Alyssa G; Gouin, Katryna A; Whitworth, J Carrie; Vlachos, Nicholas; Patel, Anita; Stuckey, Matthew J; Link-Gelles, Ruth

Prematurity Modifies the Risk of Long-term Neurodevelopmental Impairments After Invasive Group B Streptococcus Infections During Infancy in Denmark and the Netherlands. (2021) Horváth-Puhó, Erzsébet; Snoek, Linde; van Kassel, Merel N; Gonçalves, Bronner P; Chandna, Jaya; Procter, Simon R; van de Beek, Diederik; de Gier, Brechje; van der Ende, Arie; Sørensen, Henrik T; Lawn, Joy E; Bijlsma, Merijn W; GBS Danish and Dutch Collaborative Group for Long-term Outcomes picture_as_pdf

First report of severe acute respiratory syndrome coronavirus 2 detection in two asymptomatic cats in the state of Pernambuco, Northeastern Brazil. (2021) da Silva Epifanio, Ivyson; dos Santos Rodrigues, Davi; de Lima, Leonardo Borges; de Azevedo Nogueira, Maria Aurea; do Monte Pessoa Felix, Laelia Reginae; de Almeida, Barbara Ferreira; da Silva Farias, Claudia Kathariny; de Carvalho, Otavio Valerio; de Cassia Carvalho Maia, Rita; Ristow, Luiz Eduardo; Barbosa, David Soeiro; Galhardo, Juliana Arena; Pettan-Brewer, Christina; Kmetiuk, Louise Bach; Agopian, Rafael Garabet; Dutra, Valeria; de Morais, Helio Autran; dos Santos, Andrea Pires; Biondo, Alexander Welker; Brandespim, Daniel Friguglietti

Duration and determinants of delayed tuberculosis diagnosis and treatment in high-burden countries: a mixed-methods systematic review and meta-analysis. (2021) Teo, Alvin Kuo Jing; Singh, Shweta R; Prem, Kiesha; Hsu, Li Yang; Yi, Siyan

Childhood immunisation timeliness and vaccine confidence by health information source, maternal, socioeconomic, and geographic characteristics in Albania. (2021) Mayerová, Daniela; Abbas, Kaja

Rapid COVID-19 vaccine rollout: immense success but challenges ahead. (2021) Sandmann, Frank G; Jit, Mark

Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape. (2021) Tennant, Warren SD; Cardinale, Eric; Cêtre-Sossah, Catherine; Moutroifi, Youssouf; Le Godais, Gilles; Colombi, Davide; Spencer, Simon EF; Tildesley, Mike J; Keeling, Matt J; Charafouddine, Onzade; Colizza, Vittoria; Edmunds, W John; Métras, Raphaëlle

Epidemiological versus meteorological forecasts: Best practice for linking models to policymaking. (2021) Coughlan de Perez, Erin; Stephens, Elisabeth; van Aalst, Maarten; Bazo, Juan; Fournier-Tombs, Eleonore; Funk, Sebastian; Hess, Jeremy J; Ranger, Nicola; Lowe, Rachel

Antimicrobial Resistance: Is Health Technology Assessment Part of the Solution or Part of the Problem? (2021) Colson, Abigail R; Morton, Alec; Årdal, Christine; Chalkidou, Kalipso; Davies, Sally C; Garrison, Louis P; Jit, Mark; Laxminarayan, Ramanan; Megiddo, Itamar; Morel, Chantal; Nonvignon, Justice; Outterson, Kevin; Rex, John H; Sarker, Abdur Razzaque; Sculpher, Mark; Woods, Beth; Xiao, Yue

'Stay at home …': exploring the impact of the COVID-19 public health response on sexual behaviour and health service use among men who have sex with men: findings from a large online survey in the UK. (2021) Howarth, Alison R; Saunders, John; Reid, David; Kelly, Isabelle; Wayal, Sonali; Weatherburn, Peter; Hughes, Gwenda; Mercer, Catherine H

'Learn from the lessons and don't forget them': identifying transferable lessons for COVID-19 from meningitis A, yellow fever and Ebola virus disease vaccination campaigns. (2021) Collins, Julie; Westerveld, Rosie; Nelson, Kate A; Rohan, Hana; Bower, Hilary; Lazenby, Siobhan; Ikilezi, Gloria; Bartlein, Rebecca; Bausch, Daniel G; Kennedy, David S

Shining the light on congenital syphilis: from TORCH to SCORTCH. (2021) Fifer, Helen; Hughes, Gwenda; Ladhani, Shamez

Hospital-acquired SARS-CoV-2 infection in the UK's first COVID-19 pandemic wave. (2021) Read, Jonathan M; Green, Chris A; Harrison, Ewen M; Docherty, Annemarie B; Funk, Sebastian; Harrison, Janet; Girvan, Michelle; Hardwick, Hayley E; Turtle, Lance; Dunning, Jake; Nguyen-Van-Tam, Jonathan S; Openshaw, Peter Jm; Baillie, J Kenneth; Semple, Malcolm G; ISARIC4C investigators

'My primary purpose is to protect the unborn child': Understanding pregnant women's perceptions of maternal vaccination and vaccine trials in Europe. (2021) Karafillakis, E; Paterson, P; Larson, HJ

Localising Vaccination Services: Qualitative Insights on an Orthodox Jewish Collaboration with Public health during the UK coronavirus Vaccine Programme. (2021) Kasstan, Ben; Mounier-Jack, Sandra; Letley, Louise; Gaskell, Katherine M; Roberts, Chrissy H; Stone, Neil RH; Lal, Sham; Eggo, Rosalind M; Marks, Michael; Chantler, Tracey picture_as_pdf

Cost-effectiveness of strategies for preventing paediatric lower respiratory infections associated with respiratory syncytial virus in eight Chinese cities. (2021) Liu, Di; Leung, Kathy; Jit, Mark; Wu, Joseph T

Point-of-care vaccinators' perceptions of vaccine hesitancy drivers: A qualitative study from the cape metropolitan district, South Africa. (2021) Oduwole, Elizabeth O; Mahomed, Hassan; Laurenzi, Christina A; Larson, Heidi J; Wiysonge, Charles S

Safety and immunogenicity of the two-dose heterologous Ad26.ZEBOV and MVA-BN-Filo Ebola vaccine regimen in children in Sierra Leone: a randomised, double-blind, controlled trial. (2021) Afolabi, Muhammed O; Ishola, David; Manno, Daniela; Keshinro, Babajide; Bockstal, Viki; Rogers, Baimba; Owusu-Kyei, Kwabena; Serry-Bangura, Alimamy; Swaray, Ibrahim; Lowe, Brett; Kowuor, Dickens; Baiden, Frank; Mooney, Thomas; Smout, Elizabeth; Köhn, Brian; Otieno, Godfrey T; Jusu, Morrison; Foster, Julie; Samai, Mohamed; Deen, Gibrilla Fadlu; Larson, Heidi; Lees, Shelley; Goldstein, Neil; Gallagher, Katherine E; Gaddah, Auguste; Heerwegh, Dirk; Callendret, Benoit; Luhn, Kerstin; Robinson, Cynthia; Greenwood, Brian; Leyssen, Maarten; Douoguih, Macaya; Leigh, Bailah; Watson-Jones, Deborah; EBL3001 study group

Contact tracing is an imperfect tool for controlling COVID-19 transmission and relies on population adherence. (2021) Davis, Emma L; Lucas, Tim CD; Borlase, Anna; Pollington, Timothy M; Abbott, Sam; Ayabina, Diepreye; Crellen, Thomas; Hellewell, Joel; Pi, Li; CMMID COVID-19 Working Group; Medley, Graham F; Hollingsworth, T Déirdre; Klepac, Petra

Achieving global equity for COVID-19 vaccines: Stronger international partnerships and greater advocacy and solidarity are needed. (2021) Figueroa, J Peter; Hotez, Peter J; Batista, Carolina; Ben Amor, Yanis; Ergonul, Onder; Gilbert, Sarah; Gursel, Mayda; Hassanain, Mazen; Kang, Gagandeep; Kaslow, David C; Kim, Jerome H; Lall, Bhavna; Larson, Heidi; Naniche, Denise; Sheahan, Timothy; Shoham, Shmuel; Wilder-Smith, Annelies; Sow, Samba O; Strub-Wourgaft, Nathalie; Yadav, Prashant; Bottazzi, Maria Elena picture_as_pdf

Safety and long-term immunogenicity of the two-dose heterologous Ad26.ZEBOV and MVA-BN-Filo Ebola vaccine regimen in adults in Sierra Leone: a combined open-label, non-randomised stage 1, and a randomised, double-blind, controlled stage 2 trial. (2021) Ishola, David; Manno, Daniela; Afolabi, Muhammed O; Keshinro, Babajide; Bockstal, Viki; Rogers, Baimba; Owusu-Kyei, Kwabena; Serry-Bangura, Alimamy; Swaray, Ibrahim; Lowe, Brett; Kowuor, Dickens; Baiden, Frank; Mooney, Thomas; Smout, Elizabeth; Köhn, Brian; Otieno, Godfrey T; Jusu, Morrison; Foster, Julie; Samai, Mohamed; Deen, Gibrilla Fadlu; Larson, Heidi; Lees, Shelley; Goldstein, Neil; Gallagher, Katherine E; Gaddah, Auguste; Heerwegh, Dirk; Callendret, Benoit; Luhn, Kerstin; Robinson, Cynthia; Leyssen, Maarten; Greenwood, Brian; Douoguih, Macaya; Leigh, Bailah; Watson-Jones, Deborah; EBL3001 study group

Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data. (2021) Munday, James D; Jarvis, Christopher I; Gimma, Amy; Wong, Kerry LM; van Zandvoort, Kevin; CMMID COVID-19 Working Group; Funk, Sebastian; Edmunds, W John

Correction: Impacts of a sugar sweetened beverage tax on body mass index and obesity in Thailand: A modelling study. (2021) Phonsuk, Payao; Vongmongkol, Vuthiphan; Pongutta, Suladda; Suphanchaimat, Rapeepong; Rojroongwasinkul, Nipa; Swinburn, Boyd Anthony

Anal human papillomavirus prevalence and risk factors among men who have sex with men in Vietnam. (2021) Tuan, Le Anh; Prem, Kiesha; Pham, Quang Duy; Toh, Zheng Quan; Tran, Hau Phuc; Nguyen, Phuc Duy; Mai, Chu Thi Ngoc; Ly, Le Thi Khanh; Cao, Van; Le-Ha, Tam-Duong; Tuan, Nguyen Anh; Jit, Mark; Bright, Kathryn; Brisson, Marc; Nguyen, Thuong Vu; Garland, Suzanne; Anh, Dang Duc; Trang, Nguyen Van; Mulholland, Kim

The potential impact of vaccine passports on inclination to accept COVID-19 vaccinations in the United Kingdom: Evidence from a large cross-sectional survey and modeling study. (2021) de Figueiredo, Alexandre; Larson, Heidi J; Reicher, Stephen D picture_as_pdf

Impact of the Covid-19 epidemic and related social distancing regulations on social contact and SARS-CoV-2 transmission potential in rural South Africa: analysis of repeated cross-sectional surveys. (2021) McCreesh, Nicky; Dlamini, Vuyiswa; Edwards, Anita; Olivier, Stephen; Dayi, Njabulo; Dikgale, Keabetswe; Nxumalo, Siyabonga; Dreyer, Jaco; Baisley, Kathy; Siedner, Mark J; White, Richard G; Herbst, Kobus; Grant, Alison D; Harling, Guy

Severity of Severe Acute Respiratory System Coronavirus 2 (SARS-CoV-2) Alpha Variant (B.1.1.7) in England. (2021) Grint, Daniel J; Wing, Kevin; Houlihan, Catherine; Gibbs, Hamish P; Evans, Stephen JW; Williamson, Elizabeth; McDonald, Helen I; Bhaskaran, Krishnan; Evans, David; Walker, Alex J; Hickman, George; Nightingale, Emily; Schultze, Anna; Rentsch, Christopher T; Bates, Chris; Cockburn, Jonathan; Curtis, Helen J; Morton, Caroline E; Bacon, Sebastian; Davy, Simon; Wong, Angel YS; Mehrkar, Amir; Tomlinson, Laurie; Douglas, Ian J; Mathur, Rohini; MacKenna, Brian; Ingelsby, Peter; Croker, Richard; Parry, John; Hester, Frank; Harper, Sam; DeVito, Nicholas J; Hulme, Will; Tazare, John; Smeeth, Liam; Goldacre, Ben; Eggo, Rosalind M

Serial intervals in SARS-CoV-2 B.1.617.2 variant cases. (2021) Pung, Rachael; Mak, Tze Minn; CMMID COVID-19 working group; Kucharski, Adam J; Lee, Vernon J

Pragmatic cluster randomised control trial using Vaxcards as an age-appropriate tool to incentivise and educate school students about vaccination. (2021) Epstein, Daniel; Enticott, Joanne; Larson, Heidi; Barton, Christopher

The role of maturity in adolescent decision-making around HPV vaccination in France. (2021) Karafillakis, E; Peretti-Watel, P; Verger, P; Chantler, T; Larson, HJ picture_as_pdf

Effective vaccine allocation strategies, balancing economy with infection control against COVID-19 in Japan. (2021) Sunohara, Satoshi; Asakura, Toshiaki; Kimura, Takashi; Ozawa, Shun; Oshima, Satoshi; Yamauchi, Daigo; Tamakoshi, Akiko picture_as_pdf

Real-time prediction model of cVDPV2 outbreaks to aid outbreak response vaccination strategies. (2021) Voorman, Arend; O'Reilly, Kathleen; Lyons, Hil; Goel, Ajay Kumar; Touray, Kebba; Okiror, Samuel

Global public health security and justice for vaccines and therapeutics in the COVID-19 pandemic. (2021) Hotez, Peter J; Batista, Carolina; Amor, Yanis Ben; Ergonul, Onder; Figueroa, J Peter; Gilbert, Sarah; Gursel, Mayda; Hassanain, Mazen; Kang, Gagandeep; Kaslow, David C; Kim, Jerome H; Lall, Bhavna; Larson, Heidi; Naniche, Denise; Sheahan, Timothy; Shoham, Shmuel; Wilder-Smith, Annelies; Sow, Samba O; Strub-Wourgaft, Nathalie; Yadav, Prashant; Bottazzi, Maria Elena

Respiratory syncytial virus seasonality and prevention strategy planning for passive immunisation of infants in low-income and middle-income countries: a modelling study. (2021) Li, You; Hodgson, David; Wang, Xin; Atkins, Katherine E; Feikin, Daniel R; Nair, Harish

The Global Landscape of Pediatric Bacterial Meningitis Data Reported to the World Health Organization-Coordinated Invasive Bacterial Vaccine-Preventable Disease Surveillance Network, 2014-2019. (2021) Nakamura, Tomoka; Cohen, Adam L; Schwartz, Stephanie; Mwenda, Jason M; Weldegebriel, Goitom; Biey, Joseph NM; Katsande, Reggis; Ghoniem, Amany; Fahmy, Kamal; Rahman, Hossam Abdel; Videbaek, Dovile; Daniels, Danni; Singh, Simarjit; Wasley, Annemarie; Rey-Benito, Gloria; de Oliveira, Lucia; Ortiz, Claudia; Tondo, Emmanuel; Liyanage, Jayantha BL; Sharifuzzaman, Mohammad; Grabovac, Varja; Batmunkh, Nyambat; Logronio, Josephine; Heffelfinger, James; Fox, Kimberly; De Gouveia, Linda; von Gottberg, Anne; Du Plessis, Mignon; Kwambana-Adams, Brenda; Antonio, Martin; El Gohary, Samaa; Azmy, Aya; Gamal, Asmaa; Voropaeva, Elena; Egorova, Ekaterina; Urban, Yulia; Duarte, Carolina; Veeraraghavan, Balaji; Saha, Samir; Howden, Ben; Sait, Michelle; Jung, Sangoun; Bae, Songmee; Litt, David; Seaton, Shila; Slack, Mary; Antoni, Sebastien; Ouattara, Mahamoudou; Van Beneden, Chris; Serhan, Fatima

'Learn from the lessons and don't forget them': identifying transferable lessons for COVID-19 from meningitis A, yellow fever and Ebola virus disease vaccination campaigns. (2021) Collins, Julie; Westerveld, Rosie; Nelson, Kate A; Rohan, Hana; Bower, Hilary; Lazenby, Siobhan; Ikilezi, Gloria; Bartlein, Rebecca; Bausch, Daniel G; Kennedy, David S picture_as_pdf

Prevalence estimates of genital Chlamydia trachomatis infection in Belgium: results from two cross-sectional studies. (2021) Fischer, Natalie; Peeters, Ilse; Klamer, Sofieke; Montourcy, Marion; Cuylaerts, Vicky; Van Beckhoven, Dominique; De Baetselier, Irith; Van der Heyden, Johan; Vanden Berghe, Wim

Potential test-negative design study bias in outbreak settings: application to Ebola vaccination in Democratic Republic of Congo. (2021) Pearson, Carl AB; Edmunds, W John; Hladish, Thomas J; Eggo, Rosalind M

Identification of Genetically Related HCV Infections Among Self-Described Injecting Partnerships. (2021) Tully, Damien C; Hahn, Judith A; Bean, David J; Evans, Jennifer L; Morris, Meghan D; Page, Kimberly; Allen, Todd M

Impact evaluation of immunisation service integration to nutrition programmes and paediatric outpatient departments of primary healthcare centres in Rumbek East and Rumbek Centre counties of South Sudan. (2021) Idris, Israel Oluwaseyidayo; Obwoya, Justin Geno; Tapkigen, Janet; Lamidi, Serifu Ayobami; Ochagu, Victor A; Abbas, Kaja

Assessing the impact of COVID-19 border restrictions on dengue transmission in Yunnan Province, China: an observational epidemiological and phylogenetic analysis. (2021) Li, Naizhe; Feng, Yun; Vrancken, Bram; Chen, Yuyang; Dong, Lu; Yang, Qiqi; Kraemer, Moritz UG; Pybus, Oliver G; Zhang, Hailin; Brady, Oliver J; Tian, Huaiyu

COVID-19-related stigma and its influencing factors: a nationwide cross-sectional study during the early stage of the pandemic in China. (2021) Jiang, Tianyu; Zhou, Xudong; Lin, Leesa; Pan, Yanzheng; Zhong, Yuyuan; Wang, Xiaomin; Zhu, Hui

From the Approach to the Concept: One Health in Latin America-Experiences and Perspectives in Brazil, Chile, and Colombia. (2021) Pettan-Brewer, Christina; Martins, Andreza Francisco; de Abreu, Daniel Paiva Barros; Brandão, Ana Pérola Drulla; Barbosa, David Soeiro; Figueroa, Daniela P; Cediel, Natalia; Kahn, Laura H; Brandespim, Daniel Friguglietti; Velásquez, Juan Carlos Carrascal; Carvalho, Adolorata Aparecida Bianco; Takayanagui, Angela Maria Magosso; Galhardo, Juliana Arena; Maia-Filho, Luiz Flávio Arreguy; Pimpão, Cláudia Turra; Vicente, Creuza Rachel; Biondo, Alexander Welker

Exploring the behavioral determinants of COVID-19 vaccine acceptance among an urban population in Bangladesh: Implications for behavior change interventions. (2021) Kalam, Md Abul; Davis, Thomas P; Shano, Shahanaj; Uddin, Md Nasir; Islam, Md Ariful; Kanwagi, Robert; Islam, Ariful; Hassan, Mohammad Mahmudul; Larson, Heidi J

Community-based model for the delivery of antiretroviral therapy in Cambodia: a quasi-experimental study protocol. (2021) Tuot, Sovannary; Teo, Alvin Kuo Jing; Prem, Kiesha; Chhoun, Pheak; Pall, Chamroen; Ung, Mengieng; Ly, Penh Sun; Jimba, Masamine; Yi, Siyan

Factors associated with the occurrence of dengue epidemics in Brazil: a systematic review. (2021) de Sousa, Selma Costa; Carneiro, Mariângela; Eiras, Álvaro Eduardo; Bezerra, Juliana Maria Trindade; Barbosa, David Soeiro

Exploratory study of the global intent to accept COVID-19 vaccinations. (2021) de Figueiredo, Alexandre; Larson, Heidi J

''Those who do not vaccinate don't love themselves, or anyone else'': a qualitative study of views and attitudes of urban pregnant women towards maternal immunisation in Panama. (2021) Simas, Clarissa; Larson, Heidi J; Paterson, Pauline

How to improve outbreak response: a case study of integrated outbreak analytics from Ebola in Eastern Democratic Republic of the Congo. (2021) Carter, Simone E; Ahuka-Mundeke, Steve; Pfaffmann Zambruni, Jérôme; Navarro Colorado, Carlos; van Kleef, Esther; Lissouba, Pascale; Meakin, Sophie; le Polain de Waroux, Olivier; Jombart, Thibaut; Mossoko, Mathias; Bulemfu Nkakirande, Dorothée; Esmail, Marjam; Earle-Richardson, Giulia; Degail, Marie-Amelie; Umutoni, Chantal; Anoko, Julienne Ngoundoung; Gobat, Nina

Better data for country-level TB resource allocation are urgently required. (2021) Clarkson, MC; McQuaid, CF; Houben, RM; Kranzer, K; White, RG

An approach for improving the quality of country-level TB modelling. (2021) McQuaid, CF; Clarkson, MC; Bellerose, M; Floyd, K; White, RG; Menzies, NA

Vaccine hesitancy in migrant communities: a rapid review of latest evidence. (2021) Tankwanchi, Akhenaten Siankam; Bowman, Brett; Garrison, Michelle; Larson, Heidi; Wiysonge, Charles Shey

Modeling the effect of vaccination on selection for antibiotic resistance in Streptococcus pneumonia e. (2021) Davies, Nicholas G; Flasche, Stefan; Jit, Mark; Atkins, Katherine E

Unintentional Injury Burden in Hong Kong: Results from a Representative Population-Based Survey. (2021) Tang, Eric Ho Man; Bedford, Laura Elizabeth; Yu, Esther Yee Tak; Tse, Emily Tsui Yee; Dong, Weinan; Wu, Tingting; Cheung, Bernard Man Yung; Wong, Carlos King Ho; Lam, Cindy Lo Kuen

Disregarding the restrictive vial-opening policy for BCG vaccine in Guinea-Bissau: impact and cost-effectiveness for tuberculosis mortality and all-cause mortality in children aged 0-4 years. (2021) Thysen, Sanne M; Fisker, Ane Baerent; Byberg, Stine; Aaby, Peter; Roy, Partho; White, Richard; Griffiths, Ulla; Harris, Rebecca C

An Introduction to the Main Types of Economic Evaluations Used for Informing Priority Setting and Resource Allocation in Healthcare: Key Features, Uses, and Limitations. (2021) Turner, Hugo C; Archer, Rachel A; Downey, Laura E; Isaranuwatchai, Wanrudee; Chalkidou, Kalipso; Jit, Mark; Teerawattananon, Yot

Factors related to perceived stress during the COVID-19 epidemic context among the general population in China: A cross-sectional nationwide study. (2021) Xu, Jiayao; Wang, Xiaomin; Xuan, Ziming; Lin, Leesa; Sun, Kai Sing; Zhou, Yiyi; Jiang, Fangyuan; Han, Weiqi; Zhou, Xudong

A pre-registered short-term forecasting study of COVID-19 in Germany and Poland during the second wave. (2021) Bracher, J; Wolffram, D; Deuschel, J; Görgen, K; Ketterer, JL; Ullrich, A; Abbott, S; Barbarossa, MV; Bertsimas, D; Bhatia, S; Bodych, M; Bosse, NI; Burgard, JP; Castro, L; Fairchild, G; Fuhrmann, J; Funk, S; Gogolewski, K; Gu, Q; Heyder, S; Hotz, T; Kheifetz, Y; Kirsten, H; Krueger, T; Krymova, E; Li, ML; Meinke, JH; Michaud, IJ; Niedzielewski, K; Ożański, T; Rakowski, F; Scholz, M; Soni, S; Srivastava, A; Zieliński, J; Zou, D; Gneiting, T; Schienle, M; List of Contributors by Team

Predicting the environmental suitability for onchocerciasis in Africa as an aid to elimination planning. (2021) Cromwell, Elizabeth A; Osborne, Joshua CP; Unnasch, Thomas R; Basáñez, Maria-Gloria; Gass, Katherine M; Barbre, Kira A; Hill, Elex; Johnson, Kimberly B; Donkers, Katie M; Shirude, Shreya; Schmidt, Chris A; Adekanmbi, Victor; Adetokunboh, Olatunji O; Afarideh, Mohsen; Ahmadpour, Ehsan; Ahmed, Muktar Beshir; Akalu, Temesgen Yihunie; Al-Aly, Ziyad; Alanezi, Fahad Mashhour; Alanzi, Turki M; Alipour, Vahid; Andrei, Catalina Liliana; Ansari, Fereshteh; Ansha, Mustafa Geleto; Anvari, Davood; Appiah, Seth Christopher Yaw; Arabloo, Jalal; Arnold, Benjamin F; Ausloos, Marcel; Ayanore, Martin Amogre; Baig, Atif Amin; Banach, Maciej; Barac, Aleksandra; Bärnighausen, Till Winfried; Bayati, Mohsen; Bhattacharyya, Krittika; Bhutta, Zulfiqar A; Bibi, Sadia; Bijani, Ali; Bohlouli, Somayeh; Bohluli, Mahdi; Brady, Oliver J; Bragazzi, Nicola Luigi; Butt, Zahid A; Carvalho, Felix; Chatterjee, Souranshu; Chattu, Vijay Kumar; Chattu, Soosanna Kumary; Cormier, Natalie Maria; Dahlawi, Saad MA; Damiani, Giovanni; Daoud, Farah; Darwesh, Aso Mohammad; Daryani, Ahmad; Deribe, Kebede; Dharmaratne, Samath Dhamminda; Diaz, Daniel; Do, Hoa Thi; El Sayed Zaki, Maysaa; El Tantawi, Maha; Elemineh, Demelash Abewa; Faraj, Anwar; Fasihi Harandi, Majid; Fatahi, Yousef; Feigin, Valery L; Fernandes, Eduarda; Foigt, Nataliya A; Foroutan, Masoud; Franklin, Richard Charles; Gubari, Mohammed Ibrahim Mohialdeen; Guido, Davide; Guo, Yuming; Haj-Mirzaian, Arvin; Hamagharib Abdullah, Kanaan; Hamidi, Samer; Herteliu, Claudiu; Hidru, Hagos Degefa de; Higazi, Tarig B; Hossain, Naznin; Hosseinzadeh, Mehdi; Househ, Mowafa; Ilesanmi, Olayinka Stephen; Ilic, Milena D; Ilic, Irena M; Iqbal, Usman; Irvani, Seyed Sina Naghibi; Jha, Ravi Prakash; Joukar, Farahnaz; Jozwiak, Jacek Jerzy; Kabir, Zubair; Kalankesh, Leila R; Kalhor, Rohollah; Karami Matin, Behzad; Karimi, Salah Eddin; Kasaeian, Amir; Kavetskyy, Taras; Kayode, Gbenga A; Kazemi Karyani, Ali; Kelbore, Abraham Getachew; Keramati, Maryam; Khalilov, Rovshan; Khan, Ejaz Ahmad; Khan, Md Nuruzzaman Nuruzzaman; Khatab, Khaled; Khater, Mona M; Kianipour, Neda; Kibret, Kelemu Tilahun; Kim, Yun Jin; Kosen, Soewarta; Krohn, Kris J; Kusuma, Dian; La Vecchia, Carlo; Lansingh, Van Charles; Lee, Paul H; LeGrand, Kate E; Li, Shanshan; Longbottom, Joshua; Magdy Abd El Razek, Hassan; Magdy Abd El Razek, Muhammed; Maleki, Afshin; Mamun, Abdullah A; Manafi, Ali; Manafi, Navid; Mansournia, Mohammad Ali; Martins-Melo, Francisco Rogerlândio; Mazidi, Mohsen; McAlinden, Colm; Meharie, Birhanu Geta; Mendoza, Walter; Mengesha, Endalkachew Worku; Mengistu, Desalegn Tadese; Mereta, Seid Tiku; Mestrovic, Tomislav; Miller, Ted R; Miri, Mohammad; Moghadaszadeh, Masoud; Mohammadian-Hafshejani, Abdollah; Mohammadpourhodki, Reza; Mohammed, Shafiu; Mohammed, Salahuddin; Moradi, Masoud; Moradzadeh, Rahmatollah; Moraga, Paula; Mosser, Jonathan F; Naderi, Mehdi; Nagarajan, Ahamarshan Jayaraman; Naik, Gurudatta; Negoi, Ionut; Nguyen, Cuong Tat; Nguyen, Huong Lan Thi; Nguyen, Trang Huyen; Nikbakhsh, Rajan; Oancea, Bogdan; Olagunju, Tinuke O; Olagunju, Andrew T; Omar Bali, Ahmed; Onwujekwe, Obinna E; Pana, Adrian; Pourjafar, Hadi; Rahim, Fakher; Rahman, Mohammad Hifz Ur; Rathi, Priya; Rawaf, Salman; Rawaf, David Laith; Rawassizadeh, Reza; Resnikoff, Serge; Reta, Melese Abate; Rezapour, Aziz; Rubagotti, Enrico; Rubino, Salvatore; Sadeghi, Ehsan; Saghafipour, Abedin; Sajadi, S Mohammad; Samy, Abdallah M; Sarmiento-Suárez, Rodrigo; Sawhney, Monika; Schipp, Megan F; Shaheen, Amira A; Shaikh, Masood Ali; Shamsizadeh, Morteza; Sharafi, Kiomars; Sheikh, Aziz; Shetty, B Suresh Kumar; Shin, Jae Il; Shivakumar, KM; Simonetti, Biagio; Singh, Jasvinder A; Skiadaresi, Eirini; Soheili, Amin; Soltani, Shahin; Spurlock, Emma Elizabeth; Sufiyan, Mu'awiyyah Babale; Tabuchi, Takahiro; Tapak, Leili; Thompson, Robert L; Thomson, Alan J; Traini, Eugenio; Tran, Bach Xuan; Ullah, Irfan; Ullah, Saif; Uneke, Chigozie Jesse; Unnikrishnan, Bhaskaran; Uthman, Olalekan A; Vinkeles Melchers, Natalie VS; Violante, Francesco S; Wolde, Haileab Fekadu; Wonde, Tewodros Eshete; Yamada, Tomohide; Yaya, Sanni; Yazdi-Feyzabadi, Vahid; Yip, Paul; Yonemoto, Naohiro; Yousof, Hebat-Allah Salah A; Yu, Chuanhua; Yu, Yong; Yusefzadeh, Hasan; Zaki, Leila; Zaman, Sojib Bin; Zamanian, Maryam; Zhang, Zhi-Jiang; Zhang, Yunquan; Ziapour, Arash; Hay, Simon I; Pigott, David M

Modelling cassava production and pest management under biotic and abiotic constraints. (2021) Alonso Chavez, Vasthi; Milne, Alice E; van den Bosch, Frank; Pita, Justin; McQuaid, C Finn

Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the COVID-19 era. (2021) Prem, Kiesha; Zandvoort, Kevin van; Klepac, Petra; Eggo, Rosalind M; Davies, Nicholas G; Centre for the Mathematical Modelling of Infectious Diseases COV; Cook, Alex R; Jit, Mark

Serological Evidence of Widespread Zika Transmission across the Philippines. (2021) Biggs, Joseph R; Sy, Ava Kristy; Brady, Oliver J; Kucharski, Adam J; Funk, Sebastian; Tu, Yun-Hung; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Ashall, James; Avelino, Ferchito L; Sucaldito, Nemia L; Tandoc, Amado O; Cutiongco-de la Paz, Eva; Capeding, Maria Rosario Z; Padilla, Carmencita D; Hibberd, Martin L; Hafalla, Julius Clemence R

Waiting times, patient flow, and occupancy density in South African primary health care clinics: implications for infection prevention and control. (2021) Karat, Aaron S; McCreesh, Nicky; Baisley, Kathy; Govender, Indira; Kallon, Idriss I; Kielmann, Karina; MacGregor, Hayley; Vassall, Anna; Yates, Tom A; Grant, Alison D

Risk scorecard to minimize impact of COVID-19 when reopening. (2021) Lim, Shin B; Pung, Rachael; Tan, Kellie; Lang, Jocelyn HS; Yong, Dominique ZX; Teh, Shi-Hua; Quah, Elizabeth; Sun, Yinxiaohe; Ma, Stefan; Lee, Vernon JM

Evaluating the impact of a continued maternal pertussis immunisation programme in England: A modelling study and cost-effectiveness analysis. (2021) Sandmann, Frank; Jit, Mark; Andrews, Nick; Buckley, Hannah L; Campbell, Helen; Ribeiro, Sonia; Sile, Bersabeh; Stowe, Julia; Tessier, Elise; Ramsay, Mary; Amirthalingam, Gayatri; Choi, Yoon H

Real-time nowcasting and forecasting of COVID-19 dynamics in England: the first wave. (2021) Birrell, Paul; Blake, Joshua; van Leeuwen, Edwin; Gent, Nick; De Angelis, Daniela

Real-time monitoring of COVID-19 dynamics using automated trend fitting and anomaly detection. (2021) Jombart, Thibaut; Ghozzi, Stéphane; Schumacher, Dirk; Taylor, Timothy J; Leclerc, Quentin J; Jit, Mark; Flasche, Stefan; Greaves, Felix; Ward, Tom; Eggo, Rosalind M; Nightingale, Emily; Meakin, Sophie; Brady, Oliver J; Centre for Mathematical Modelling of Infectious Diseases COVID-1; Medley, Graham F; Höhle, Michael; Edmunds, W John

Quantifying long-term health and economic outcomes for survivors of group B Streptococcus invasive disease in infancy: protocol of a multi-country study in Argentina, India, Kenya, Mozambique and South Africa. (2021) Paul, Proma; Procter, Simon R; Dangor, Ziyaad; Bassat, Quique; Abubakar, Amina; Santhanam, Sridhar; Libster, Romina; Gonçalves, Bronner P; Madhi, Shabir A; Bardají, Azucena; Mwangome, Eva; Mabrouk, Adam; John, Hima B; Sánchez Yanotti, Clara; Chandna, Jaya; Sithole, Pamela; Mucasse, Humberto; Katana, Patrick V; Koukounari, Artemis; Harden, Lois M; Aerts, Celine; Ghoor, Azra; Leahy, Shannon; Mbatha, Sibongile; Lowick, Sarah; Lala, Sanjay G; Bramugy, Justina; Newton, Charles; Hossain, AKM Tanvir; Sadeq-Ur Rahman, Qazi; Lambach, Philipp; Jit, Mark; Lawn, Joy E

Public Attitudes and Factors of COVID-19 Testing Hesitancy in the United Kingdom and China: Comparative Infodemiology Study. (2021) Lin, Leesa; Song, Yi; Wang, Qian; Pu, Jialu; Sun, Fiona Yueqian; Zhang, Yixuan; Zhou, Xinyu; Larson, Heidi J; Hou, Zhiyuan

Repurposing DPP-4 Inhibitors for Colorectal Cancer: A Retrospective and Single Center Study. (2021) Ng, Lui; Foo, Dominic Chi-Chung; Wong, Carlos King-Ho; Man, Abraham Tak-Ka; Lo, Oswens Siu-Hung; Law, Wai-Lun

Disruptions to childhood immunisation due to the COVID-19 pandemic. (2021) Abbas, Kaja; Mogasale, Vittal

Clinical, Radiological and Functional Characteristics of Pulmonary Diseases among HTLV-1 Infected Patients without Prior Active Tuberculosis Infection. (2021) Cachay, Rodrigo; Gil-Zacarias, Marcela; Watanabe-Tejada, Takashi; Schwalb, Alvaro; Mejía, Fernando; Gayoso, Oscar; Gotuzzo, Eduardo

Optimization and Stability Testing of Four Commercially Available Dried Blood Spot Devices for Estimating Measles and Rubella IgG Antibodies. (2021) Kaduskar, Ojas; Bhatt, Vaishali; Prosperi, Christine; Hayford, Kyla; Hasan, Alvira Z; Deshpande, Gururaj Rao; Tilekar, Bipin; Vivian Thangaraj, Jeromie Wesley; Kumar, Muthusamy Santhosh; Gupta, Nivedita; Murhekar, Manoj V; Moss, William J; Mehendale, Sanjay M; Sangal, Lucky; Sapkal, Gajanan

Key epidemiological drivers and impact of interventions in the 2020 SARS-CoV-2 epidemic in England. (2021) Knock, Edward S; Whittles, Lilith K; Lees, John A; Perez-Guzman, Pablo N; Verity, Robert; FitzJohn, Richard G; Gaythorpe, Katy AM; Imai, Natsuko; Hinsley, Wes; Okell, Lucy C; Rosello, Alicia; Kantas, Nikolas; Walters, Caroline E; Bhatia, Sangeeta; Watson, Oliver J; Whittaker, Charlie; Cattarino, Lorenzo; Boonyasiri, Adhiratha; Djaafara, Bimandra A; Fraser, Keith; Fu, Han; Wang, Haowei; Xi, Xiaoyue; Donnelly, Christl A; Jauneikaite, Elita; Laydon, Daniel J; White, Peter J; Ghani, Azra C; Ferguson, Neil M; Cori, Anne; Baguelin, Marc

Optimising health and economic impacts of COVID-19 vaccine prioritisation strategies in the WHO European Region. (2021) Liu, Yang; Sandmann, Frank G; Barnard, Rosanna C; Pearson, Carl AB; CMMID COVID-19 Working Group; Pastore, Roberta; Pebody, Richard; Flasche, Stefan; Jit, Mark

Diagnostic Accuracy of Dried Blood Spots Collected on HemaSpot HF Devices Compared to Venous Blood Specimens To Estimate Measles and Rubella Seroprevalence. (2021) Prosperi, Christine; Kaduskar, Ojas; Bhatt, Vaishali; Hasan, Alvira Z; Vivian Thangaraj, Jeromie W; Kumar, Muthusamy S; Sabarinathan, R; Kumar, Saravana; Duraiswamy, Augustine; Deshpande, Gururaj Rao; Padinjaremattathil Thankappan, Ullas; Chauhan, Sanjay L; Kulkarni, Ragini N; Bansal, Avi Kumar; Chaaithanya, Itta K; Salvi, Neha R; Sharma, Sandeep; Moss, William J; Sangal, Lucky; Gupta, Nivedita; Murherkar, Manoj V; Mehendale, Sanjay M; Sapkal, Gajanan N; Hayford, Kyla

Risks of covid-19 hospital admission and death for people with learning disability: population based cohort study using the OpenSAFELY platform. (2021) Williamson, Elizabeth J; McDonald, Helen I; Bhaskaran, Krishnan; Walker, Alex J; Bacon, Sebastian; Davy, Simon; Schultze, Anna; Tomlinson, Laurie; Bates, Chris; Ramsay, Mary; Curtis, Helen J; Forbes, Harriet; Wing, Kevin; Minassian, Caroline; Tazare, John; Morton, Caroline E; Nightingale, Emily; Mehrkar, Amir; Evans, Dave; Inglesby, Peter; MacKenna, Brian; Cockburn, Jonathan; Rentsch, Christopher T; Mathur, Rohini; Wong, Angel YS; Eggo, Rosalind M; Hulme, William; Croker, Richard; Parry, John; Hester, Frank; Harper, Sam; Douglas, Ian J; Evans, Stephen JW; Smeeth, Liam; Goldacre, Ben; Kuper, Hannah

Lives saved with vaccination for 10 pathogens across 112 countries in a pre-COVID-19 world. (2021) Toor, Jaspreet; Echeverria-Londono, Susy; Li, Xiang; Abbas, Kaja; Carter, Emily D; Clapham, Hannah E; Clark, Andrew; de Villiers, Margaret J; Eilertson, Kirsten; Ferrari, Matthew; Gamkrelidze, Ivane; Hallett, Timothy B; Hinsley, Wes R; Hogan, Daniel; Huber, John H; Jackson, Michael L; Jean, Kevin; Jit, Mark; Karachaliou, Andromachi; Klepac, Petra; Kraay, Alicia; Lessler, Justin; Li, Xi; Lopman, Benjamin A; Mengistu, Tewodaj; Metcalf, C Jessica E; Moore, Sean M; Nayagam, Shevanthi; Papadopoulos, Timos; Perkins, T Alex; Portnoy, Allison; Razavi, Homie; Razavi-Shearer, Devin; Resch, Stephen; Sanderson, Colin; Sweet, Steven; Tam, Yvonne; Tanvir, Hira; Tran Minh, Quan; Trotter, Caroline L; Truelove, Shaun A; Vynnycky, Emilia; Walker, Neff; Winter, Amy; Woodruff, Kim; Ferguson, Neil M; Gaythorpe, Katy Am

Detecting behavioural changes in human movement to inform the spatial scale of interventions against COVID-19. (2021) Gibbs, Hamish; Nightingale, Emily; Liu, Yang; Cheshire, James; Danon, Leon; Smeeth, Liam; Pearson, Carl AB; Grundy, Chris; LSHTM CMMID COVID-19 working group; Kucharski, Adam J; Eggo, Rosalind M

Costing analysis of field implementation of hepatitis C case detection in rural Maung Russey operational district, Cambodia. (2021) Han, Su Myat; Por, Ir; Samley, Keo; Bunreth, Voeurng; Smith, Chris; Ariyoshi, Koya; Dousset, Jean-Philippe; Le Paih, Mickael

Projecting the risk of mosquito-borne diseases in a warmer and more populated world: a multi-model, multi-scenario intercomparison modelling study. (2021) Colón-González, Felipe J; Sewe, Maquins Odhiambo; Tompkins, Adrian M; Sjödin, Henrik; Casallas, Alejandro; Rocklöv, Joacim; Caminade, Cyril; Lowe, Rachel

Transmission modelling of environmentally persistent zoonotic diseases: a systematic review. (2021) Rees, Eleanor M; Minter, Amanda; Edmunds, W John; Lau, Colleen L; Kucharski, Adam J; Lowe, Rachel

Trust, emotions and risks: Pregnant women's perceptions, confidence and decision-making practices around maternal vaccination in France. (2021) Karafillakis, E; Francis, MR; Paterson, P; Larson, HJ

covidregionaldata: Subnational data for COVID-19 epidemiology. (2021) Palmer, Joseph; Sherratt, Katharine; Martin-Nielsen, Richard; Bevan, Jonnie; Gibbs, Hamish; Group, Cmmid; Funk, Sebastian; Abbott, Sam

"From my phone, I could rule the world": Critical engagement with maternal vaccine information, vaccine confidence builders and post-Zika outbreak rumours in Brazil. (2021) Simas, Clarissa; Paterson, Pauline; Lees, Shelley; J Larson, Heidi

Trips-Viz: an environment for the analysis of public and user-generated ribosome profiling data. (2021) Kiniry, Stephen J; Judge, Ciara E; Michel, Audrey M; Baranov, Pavel V

Seroprevalence of SARS-CoV-2 among Blood Donors and Changes after Introduction of Public Health and Social Measures, London, UK. (2021) Amirthalingam, Gayatri; Whitaker, Heather; Brooks, Tim; Brown, Kevin; Hoschler, Katja; Linley, Ezra; Borrow, Ray; Brown, Colin; Watkins, Nick; Roberts, David J; Solomon, Danielle; Gower, Charlotte M; de Waroux, Olivier le Polain; Andrews, Nick J; Ramsay, Mary E

Factors associated with deaths due to COVID-19 versus other causes: population-based cohort analysis of UK primary care data and linked national death registrations within the OpenSAFELY platform. (2021) Bhaskaran, Krishnan; Bacon, Sebastian; Evans, Stephen Jw; Bates, Chris J; Rentsch, Christopher T; MacKenna, Brian; Tomlinson, Laurie; Walker, Alex J; Schultze, Anna; Morton, Caroline E; Grint, Daniel; Mehrkar, Amir; Eggo, Rosalind M; Inglesby, Peter; Douglas, Ian J; McDonald, Helen I; Cockburn, Jonathan; Williamson, Elizabeth J; Evans, David; Curtis, Helen J; Hulme, William J; Parry, John; Hester, Frank; Harper, Sam; Spiegelhalter, David; Smeeth, Liam; Goldacre, Ben

Global diarrhoea-associated mortality estimates and models in children: Recommendations for dataset and study selection. (2021) Butkeviciute, Egle; Prudden, Holly J; Jit, Mark; Smith, Peter G; Kang, Gagandeep; Riddle, Mark S; Lopman, Benjamin A; Pitzer, Virginia E; Lanata, Claudio F; Platts-Mills, James A; Breiman, Robert F; Giersing, Birgitte K; Hasso-Agopsowicz, Mateusz

Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UK. (2021) Docherty, Annemarie B; Mulholland, Rachel H; Lone, Nazir I; Cheyne, Christopher P; De Angelis, Daniela; Diaz-Ordaz, Karla; Donegan, Cara; Drake, Thomas M; Dunning, Jake; Funk, Sebastian; García-Fiñana, Marta; Girvan, Michelle; Hardwick, Hayley E; Harrison, Janet; Ho, Antonia; Hughes, David M; Keogh, Ruth H; Kirwan, Peter D; Leeming, Gary; Nguyen Van-Tam, Jonathan S; Pius, Riinu; Russell, Clark D; Spencer, Rebecca G; Tom, Brian Dm; Turtle, Lance; Openshaw, Peter Jm; Baillie, J Kenneth; Harrison, Ewen M; Semple, Malcolm G; ISARIC4C Investigators

The impact of testing and infection prevention and control strategies on within-hospital transmission dynamics of COVID-19 in English hospitals. (2021) Evans, Stephanie; Agnew, Emily; Vynnycky, Emilia; Stimson, James; Bhattacharya, Alex; Rooney, Christopher; Warne, Ben; Robotham, Julie

SARS-CoV-2 seroprevalence in a strictly-Orthodox Jewish community in the UK: A retrospective cohort study. (2021) Gaskell, Katherine M; Johnson, Marina; Gould, Victoria; Hunt, Adam; Stone, Neil Rh; Waites, William; Kasstan, Ben; Chantler, Tracey; Lal, Sham; Roberts, Chrissy H; Goldblatt, David; Eggo, Rosalind M; Marks, Michael picture_as_pdf

Effects of Coronavirus Disease Pandemic on Tuberculosis Notifications, Malawi. (2021) Soko, Rebecca Nzawa; Burke, Rachael M; Feasey, Helena RA; Sibande, Wakumanya; Nliwasa, Marriott; Henrion, Marc YR; Khundi, McEwen; Dodd, Peter J; Ku, Chu Chang; Kawalazira, Gift; Choko, Augustine T; Divala, Titus H; Corbett, Elizabeth L; MacPherson, Peter

Exploring surveillance data biases when estimating the reproduction number: with insights into subpopulation transmission of COVID-19 in England. (2021) Sherratt, Katharine; Abbott, Sam; Meakin, Sophie R; Hellewell, Joel; Munday, James D; Bosse, Nikos; CMMID COVID-19 Working Group; Jit, Mark; Funk, Sebastian

Effects of COVID-19 Vaccination Timing and Risk Prioritization on Mortality Rates, United States. (2021) Wang, Xutong; Du, Zhanwei; Johnson, Kaitlyn E; Pasco, Remy F; Fox, Spencer J; Lachmann, Michael; McLellan, Jason S; Meyers, Lauren Ancel

Clinical coding of long COVID in English primary care: a federated analysis of 58 million patient records in situ using OpenSAFELY. (2021) Walker, Alex J; MacKenna, Brian; Inglesby, Peter; Tomlinson, Laurie; Rentsch, Christopher T; Curtis, Helen J; Morton, Caroline E; Morley, Jessica; Mehrkar, Amir; Bacon, Seb; Hickman, George; Bates, Chris; Croker, Richard; Evans, David; Ward, Tom; Cockburn, Jonathan; Davy, Simon; Bhaskaran, Krishnan; Schultze, Anna; Williamson, Elizabeth J; Hulme, William J; McDonald, Helen I; Mathur, Rohini; Eggo, Rosalind M; Wing, Kevin; Wong, Angel Ys; Forbes, Harriet; Tazare, John; Parry, John; Hester, Frank; Harper, Sam; O'Hanlon, Shaun; Eavis, Alex; Jarvis, Richard; Avramov, Dima; Griffiths, Paul; Fowles, Aaron; Parkes, Nasreen; Douglas, Ian J; Evans, Stephen Jw; (The OpenSAFELY Collaborative)

‘Welcome to #GabFam’: Far-right virtual community on Gab. (2021) Jasser, Greta; McSwiney, Jordan; Pertwee, Ed; Zannettou, Savvas

Models of COVID-19 vaccine prioritisation: a systematic literature search and narrative review. (2021) Saadi, Nuru; Chi, Y-Ling; Ghosh, Srobana; Eggo, Rosalind M; McCarthy, Ciara; Quaife, Matthew; Dawa, Jeanette; Jit, Mark; Vassall, Anna

Modeling the early temporal dynamics of viral load in respiratory tract specimens of COVID-19 patients in Incheon, the Republic of Korea. (2021) Lim, Ah-Young; Cheong, Hae-Kwan; Oh, Yoon Ju; Lee, Jae Kap; So, Jae Bum; Kim, Hyun Jin; Han, Boram; Park, Sung Won; Jang, Yongsun; Yoon, Chang Yong; Park, Yun Ok; Kim, Jong-Hun; Kim, Jin Yong

Estimating ventilation rates in rooms with varying occupancy levels: Relevance for reducing transmission risk of airborne pathogens. (2021) Deol, Arminder K; Scarponi, Danny; Beckwith, Peter; Yates, Tom A; Karat, Aaron S; Yan, Ada WC; Baisley, Kathy S; Grant, Alison D; White, Richard G; McCreesh, Nicky

Impact of COVID-19-related disruptions to measles, meningococcal A, and yellow fever vaccination in 10 countries. (2021) Gaythorpe, Katy Am; Abbas, Kaja; Huber, John; Karachaliou, Andromachi; Thakkar, Niket; Woodruff, Kim; Li, Xiang; Echeverria-Londono, Susy; VIMC Working Group on COVID-19 Impact on Vaccine Preventable Dis; Ferrari, Matthew; Jackson, Michael L; McCarthy, Kevin; Perkins, T Alex; Trotter, Caroline; Jit, Mark

Field-based longitudinal study design for measuring the association between indoor air quality and occupant health status in residential buildings. (2021) Lim, Ah-Young; Yoon, Miryoung; Kim, Eun-Hye; Kim, Hyun-Ah; Lee, Myoung Ju; Cheong, Hae-Kwan

"Saint Google, now we have information!": a qualitative study on narratives of trust and attitudes towards maternal vaccination in Mexico City and Toluca. (2021) Simas, Clarissa; Larson, Heidi J; Paterson, Pauline

Increased transmissibility and global spread of SARS-CoV-2 variants of concern as at June 2021. (2021) Campbell, Finlay; Archer, Brett; Laurenson-Schafer, Henry; Jinnai, Yuka; Konings, Franck; Batra, Neale; Pavlin, Boris; Vandemaele, Katelijn; Van Kerkhove, Maria D; Jombart, Thibaut; Morgan, Oliver; le Polain de Waroux, Olivier

<i>o2geosocial</i>: Reconstructing who-infected-whom from routinely collected surveillance data. (2021) Robert, Alexis; Funk, Sebastian; Kucharski, Adam J

o2geosocial: Reconstructing who-infected-whom from routinely collected surveillance data. (2021) Robert, Alexis; Funk, Sebastian; Kucharski, Adam J

Case-area targeted interventions (CATI) for reactive dengue control: Modelling effectiveness of vector control and prophylactic drugs in Singapore. (2021) Brady, Oliver J; Kucharski, Adam J; Funk, Sebastian; Jafari, Yalda; Loock, Marnix Van; Herrera-Taracena, Guillermo; Menten, Joris; Edmunds, W John; Sim, Shuzhen; Ng, Lee-Ching; Hué, Stéphane; Hibberd, Martin L

SARS-CoV-2 antigen testing: weighing the false positives against the costs of failing to control transmission. (2021) Fearon, Elizabeth; Buchan, Iain E; Das, Rajenki; Davis, Emma L; Fyles, Martyn; Hall, Ian; Hollingsworth, T Deirdre; House, Thomas; Jay, Caroline; Medley, Graham F; Pellis, Lorenzo; Quilty, Billy J; Silva, Miguel EP; Stage, Helena B; Wingfield, Tom

Estimation of country-level incidence of early-onset invasive Group B Streptococcus disease in infants using Bayesian methods. (2021) Gonçalves, Bronner P; Procter, Simon R; Clifford, Sam; Koukounari, Artemis; Paul, Proma; Lewin, Alexandra; Jit, Mark; Lawn, Joy

Inequities in childhood immunisation coverage associated with socioeconomic, geographic, maternal, child, and place of birth characteristics in Kenya. (2021) Allan, Simon; Adetifa, Ifedayo MO; Abbas, Kaja

Serial intervals observed in SARS-CoV-2 B.1.617.2 variant cases. (2021) Pung, Rachael; Mak, Tze Minn; Kucharski, Adam J; Lee, Vernon J

Beyond the jab: A need for global coordination of pharmacovigilance for COVID-19 vaccine deployment. (2021) Naniche, Denise; Hotez, Peter; Bottazzi, Maria Elena; Ergonul, Onder; Figueroa, J Peter; Gilbert, Sarah; Gursel, Mayda; Hassanain, Mazen; Kang, Gagandeep; Kaslow, David; Kim, Jerome H; Lall, Bhavna; Larson, Heidi; Sheahan, Timothy; Shoham, Shmuel; Wilder-Smith, Annelies; Sow, Samba O; Strub-Wourgaft, Nathalie; Yadav, Prashant; Batista, Carolina

The validity, reliability, sensitivity and responsiveness of a modified Patient Enablement Instrument (PEI-2) as a tool for serial measurements of health enablement. (2021) Bedford, Laura Elizabeth; Yeung, Maegan Hon Yan; Au, Chi Ho; Tse, Emily Tsui Yee; Yim, Wing Yee; Yu, Esther Yee Tak; Wong, Carlos King Ho; Lam, Cindy Lo Kuen

Tuberculosis in the Western Pacific Region: Estimating the burden of disease and return on investment 2020–2030 in four countries. (2021) Estill, Janne; Islam, Tauhid; Houben, Rein MGJ; Rudman, Jamie; Ragonnet, Romain; McBryde, Emma S; Trauer, James M; Orel, Erol; Nguyen, Anh Tuan; Rahevar, Kalpeshsinh; Morishita, Fukushi; Oh, Kyung Hyun; Raviglione, Mario C; Keiser, Olivia

Oropharyngeal Neisseria gonorrhoeae infections: should women be routinely tested? (2021) Fifer, Helen; Hughes, Gwenda

Understanding confidence in the human papillomavirus vaccine in Japan: a web-based survey of mothers, female adolescents, and healthcare professionals. (2021) Shuto, Michiko; Kim, Youngju; Okuyama, Kotoba; Ouchi, Kazunobu; Ueichi, Hideo; Nnadi, Chimeremma; Larson, Heidi J; Perez, Gonzalo; Sasaki, Shin

A global assessment of the impact of school closure in reducing COVID-19 spread. (2021) Wu, Joseph T; Mei, Shujiang; Luo, Sihui; Leung, Kathy; Liu, Di; Lv, Qiuying; Liu, Jian; Li, Yuan; Prem, Kiesha; Jit, Mark; Weng, Jianping; Feng, Tiejian; Zheng, Xueying; Leung, Gabriel M

Screening for tuberculosis among high-risk groups attending London emergency departments: a prospective observational study. (2021) Gupta, Rishi K; Lule, Swaib A; Krutikov, Maria; Gosce, Lara; Green, Nathan; Southern, Jo; Imran, Ambreen; Aldridge, Robert W; Kunst, Heinke; Lipman, Marc; Lynn, William; Burgess, Helen; Rahman, Asif; Menezes, Dee; Rahman, Ananna; Tiberi, Simon; White, Peter J; Abubakar, Ibrahim

The social impact of the COVID-19 outbreak on urban slums and the response of civil society organisations: A case study in Bangkok, Thailand. (2021) Pongutta, Suladda; Kantamaturapoj, Kanang; Phakdeesettakun, Kannapon; Phonsuk, Payao

The Influence of the COVID-19 Epidemic on Prevention and Vaccination Behaviors Among Chinese Children and Adolescents: Cross-sectional Online Survey Study. (2021) Hou, Zhiyuan; Song, Suhang; Du, Fanxing; Shi, Lu; Zhang, Donglan; Lin, Leesa; Yu, Hongjie picture_as_pdf

Spatial connectivity in mosquito-borne disease models: a systematic review of methods and assumptions. (2021) Lee, Sophie A; Jarvis, Christopher I; Edmunds, W John; Economou, Theodoros; Lowe, Rachel

Maternal Vaccination in Uganda: Exploring Pregnant Women, Community Leaders and Healthcare Workers' Perceptions. (2021) Nalubega, Phiona; Karafillakis, Emilie; Atuhaire, Lydia; Akite, Pamela; Zalwango, Flavia; Chantler, Tracey; Cochet, Madeleine; Seeley, Janet; Le Doare, Kirsty picture_as_pdf

Urgent needs to accelerate the race for COVID-19 therapeutics. (2021) Batista, Carolina; Shoham, Shmuel; Ergonul, Onder; Hotez, Peter; Bottazzi, Maria Elena; Figueroa, J Peter; Gilbert, Sarah; Gursel, Mayda; Hassanain, Mazen; Kang, Gagandeep; Kaslow, David; Kim, Jerome H; Lall, Bhavna; Larson, Heidi; Naniche, Denise; Sheahan, Timothy; Wilder-Smith, Annelies; Sow, Samba O; Yadav, Prashant; Strub-Wourgaft, Nathalie

The potential for vaccination-induced herd immunity against the SARS-CoV-2 B.1.1.7 variant. (2021) Hodgson, David; Flasche, Stefan; Jit, Mark; Kucharski, Adam J; CMMID COVID-19 Working Group; Centre for Mathematical Modelling of Infectious Disease (CMMID)

Exceptional Prices of Medical and Other Supplies during the COVID-19 Pandemic in Ecuador. (2021) Ortiz-Prado, Esteban; Fernandez-Naranjo, Raul; Torres-Berru, Yeferson; Lowe, Rachel; Torres, Irene

A follow-up study (2007-2018) on American Tegumentary Leishmaniasis in the municipality of Caratinga, Minas Gerais State, Brazil: Spatial analyses and sand fly collection. (2021) Neves, Rafael L; Cardoso, Diogo T; Rêgo, Felipe D; Gontijo, Célia MF; Barbosa, David S; Soares, Rodrigo P

Quarantine and testing strategies in contact tracing for SARS-CoV-2: a modelling study. (2021) Quilty, Billy J; Clifford, Samuel; Hellewell, Joel; Russell, Timothy W; Kucharski, Adam J; Flasche, Stefan; Edmunds, W John; Centre for the Mathematical Modelling of Infectious Diseases COV

Assessing COVID-19 Vaccine Hesitancy, Confidence, and Public Engagement: A Global Social Listening Study. (2021) Hou, Zhiyuan; Tong, Yixin; Du, Fanxing; Lu, Linyao; Zhao, Sihong; Yu, Kexin; Piatek, Simon J; Larson, Heidi J; Lin, Leesa

Barriers and enablers experienced by health care workers in swabbing for COVID-19 in Papua New Guinea: A multi-methods cross-sectional study. (2021) Smaghi, Bernnedine S; Collins, Julie; Dagina, Rosheila; Hiawalyer, Gilbert; Vaccher, Stefanie; Flint, James; Housen, Tambri

Importance of patient bed pathways and length of stay differences in predicting COVID-19 hospital bed occupancy in England. (2021) Leclerc, Quentin J; Fuller, Naomi M; Keogh, Ruth H; Diaz-Ordaz, Karla; Sekula, Richard; Semple, Malcolm G; ISARIC4C Investigators; CMMID COVID-19 Working Group; Atkins, Katherine E; Procter, Simon R; Knight, Gwenan M

Pre-vaccination testing could expand coverage of two-dose COVID vaccines. (2021) Pearson, Carl AB; Clifford, Sam; Pulliam, Juliet RC; Eggo, Rosalind M

COVID-19 vaccine challenges: What have we learned so far and what remains to be done? (2021) Forman, Rebecca; Shah, Soleil; Jeurissen, Patrick; Jit, Mark; Mossialos, Elias

The impact of childhood pneumococcal conjugate vaccine immunisation on all-cause pneumonia admissions in Hong Kong: A 14-year population-based interrupted time series analysis. (2021) Yu, Qiuyan; Li, Xue; Fan, Min; Qiu, Hong; Wong, Angel YS; Tian, Linwei; Chui, Celine SL; Li, Philip H; Lau, Lauren KW; Chan, Esther W; Goggins, William B; Ip, Patrick; Lum, Terry Y; Hung, Ivan FN; Cowling, Benjamin J; Wong, Ian CK; Jit, Mark

Recruiting for research on sensitive topics in schools: an experience with Vaxcards, a collectable vaccine card game. (2021) Epstein, DS; Enticott, JC; Larson, HJ; Barton, C

Digital adherence technology for TB: focus on livelihoods as well as lives. (2021) McQuaid, CF; Foster, N; Quaife, M; Levy, J; Tadesse, AW; Charalambous, S; Alacapa, JV; Deyanova, N; Mganga, A; Houben, RMGJ; Fielding, KL

The impact of population-wide rapid antigen testing on SARS-CoV-2 prevalence in Slovakia. (2021) Pavelka, Martin; Van-Zandvoort, Kevin; Abbott, Sam; Sherratt, Katharine; Majdan, Marek; CMMID COVID-19 working group; Inštitút Zdravotných Analýz; Jarčuška, Pavol; Krajčí, Marek; Flasche, Stefan; Funk, Sebastian

Tuberculosis Scientific Conferences in Peru: Sharing local evidence for local decisions. (2021) Schwalb, Alvaro; Cachay, Rodrigo; Curisinche-Rojas, Maricela; Gotuzzo, Eduardo; Ríos, Julia; Ugarte-Gil, César

HIV Pre-Exposure Prophylaxis, Condoms, or Both? Insights on Risk Compensation Through a Discrete Choice Experiment and Latent Class Analysis Among Men Who Have Sex With Men. (2021) Tan, Rayner Kay Jin; Wang, Yi; Prem, Kiesha; Harrison-Quintana, Jack; Teo, Alvin Kuo Jing; Kaur, Nashwinder; Cook, Alex R; Chen, Mark I-Cheng; Wong, Chen Seong

Responsiveness of the EuroQoL 5-Dimension (EQ-5D) questionnaire in patients with spondyloarthritis. (2021) Tsang, Helen Hoi Lun; Wong, Carlos King Ho; Cheung, Prudence Wing Hang; Lau, Chak Sing; Chung, Ho Yin; Cheung, Jason Pui Yin

Ethnic differences in SARS-CoV-2 infection and COVID-19-related hospitalisation, intensive care unit admission, and death in 17 million adults in England: an observational cohort study using the OpenSAFELY platform. (2021) Mathur, Rohini; Rentsch, Christopher T; Morton, Caroline E; Hulme, William J; Schultze, Anna; MacKenna, Brian; Eggo, Rosalind M; Bhaskaran, Krishnan; Wong, Angel YS; Williamson, Elizabeth J; Forbes, Harriet; Wing, Kevin; McDonald, Helen I; Bates, Chris; Bacon, Seb; Walker, Alex J; Evans, David; Inglesby, Peter; Mehrkar, Amir; Curtis, Helen J; DeVito, Nicholas J; Croker, Richard; Drysdale, Henry; Cockburn, Jonathan; Parry, John; Hester, Frank; Harper, Sam; Douglas, Ian J; Tomlinson, Laurie; Evans, Stephen JW; Grieve, Richard; Harrison, David; Rowan, Kathy; Khunti, Kamlesh; Chaturvedi, Nishi; Smeeth, Liam; Goldacre, Ben

Exploring equity in health and poverty impacts of control measures for SARS-CoV-2 in six countries. (2021) Sweeney, Sedona; Capeding, Theo Prudencio Juhani; Eggo, Rosalind; Huda, Maryam; Jit, Mark; Mudzengi, Don; Naylor, Nichola R; Procter, Simon; Quaife, Matthew; Serebryakova, Lela; Torres-Rueda, Sergio; Vargas, Veronica; CHiL COVID Working Group; Vassall, Anna

Estimating the effectiveness of routine asymptomatic PCR testing at different frequencies for the detection of SARS-CoV-2 infections. (2021) Hellewell, Joel; Russell, Timothy W; SAFER Investigators and Field Study Team; Crick COVID-19 Consortium; CMMID COVID-19 working group; Beale, Rupert; Kelly, Gavin; Houlihan, Catherine; Nastouli, Eleni; Kucharski, Adam J

Dynamics of sputum conversion during effective tuberculosis treatment: A systematic review and meta-analysis. (2021) Calderwood, Claire J; Wilson, James P; Fielding, Katherine L; Harris, Rebecca C; Karat, Aaron S; Mansukhani, Raoul; Falconer, Jane; Bergstrom, Malin; Johnson, Sarah M; McCreesh, Nicky; Monk, Edward JM; Odayar, Jasantha; Scott, Peter J; Stokes, Sarah A; Theodorou, Hannah; Moore, David AJ

Interventions targeting non-symptomatic cases can be important to prevent local outbreaks: SARS-CoV-2 as a case study. (2021) Lovell-Read, Francesca A; Funk, Sebastian; Obolski, Uri; Donnelly, Christl A; Thompson, Robin N

Leveraging community mortality indicators to infer COVID-19 mortality and transmission dynamics in Damascus, Syria. (2021) Watson, Oliver J; Alhaffar, Mervat; Mehchy, Zaki; Whittaker, Charles; Akil, Zack; Brazeau, Nicholas F; Cuomo-Dannenburg, Gina; Hamlet, Arran; Thompson, Hayley A; Baguelin, Marc; FitzJohn, Richard G; Knock, Edward; Lees, John A; Whittles, Lilith K; Mellan, Thomas; Winskill, Peter; Imperial College COVID-19 Response Team; Howard, Natasha; Clapham, Hannah; Checchi, Francesco; Ferguson, Neil; Ghani, Azra; Beals, Emma; Walker, Patrick

Mortality, neurodevelopmental impairments, and economic outcomes after invasive group B streptococcal disease in early infancy in Denmark and the Netherlands: a national matched cohort study. (2021) Horváth-Puhó, Erzsébet; van Kassel, Merel N; Gonçalves, Bronner P; de Gier, Brechje; Procter, Simon R; Paul, Proma; van der Ende, Arie; Søgaard, Kirstine K; Hahné, Susan JM; Chandna, Jaya; Schrag, Stephanie J; van de Beek, Diederik; Jit, Mark; Sørensen, Henrik T; Bijlsma, Merijn W; Lawn, Joy E

The Uncounted Casualties of a Hidden COVID-19 Epidemic in China: Cross-sectional Study on Deaths Related to Overwork. (2021) Wang, Zhicheng; Lin, Leesa; Guo, Yan; Xiong, Huayi; Tang, Kun picture_as_pdf

Smallholder Cassava Planting Material Movement and Grower Behavior in Zambia: Implications for the Management of Cassava Virus Diseases. (2021) Szyniszewska, Anna Maria; Chikoti, Patrick Chiza; Tembo, Mathias; Mulenga, Rabson; Gilligan, Christopher Aidan; van den Bosch, Frank; McQuaid, Christopher Finn

"Kankasha" in Kassala: A prospective observational cohort study of the clinical characteristics, epidemiology, genetic origin, and chronic impact of the 2018 epidemic of Chikungunya virus infection in Kassala, Sudan. (2021) Bower, Hilary; El Karsany, Mubarak; Adam, Abd Alhadi Adam Hussein; Idriss, Mubarak Ibrahim; Alzain, Ma'aaza Abasher; Alfakiyousif, Mohamed Elamin Ahmed; Mohamed, Rehab; Mahmoud, Iman; Albadri, Omer; Mahmoud, Suha Abdulaziz Alnour; Abdalla, Orwa Ibrahim; Eldigail, Mawahib; Elagib, Nuha; Arnold, Ulrike; Gutierrez, Bernardo; Pybus, Oliver G; Carter, Daniel P; Pullan, Steven T; Jacob, Shevin T; Abdallah, Tajeldin Mohammedein; Gannon, Benedict; Fletcher, Tom E

Categorizing Vaccine Confidence With a Transformer-Based Machine Learning Model: Analysis of Nuances of Vaccine Sentiment in Twitter Discourse. (2021) Kummervold, Per E; Martin, Sam; Dada, Sara; Kilich, Eliz; Denny, Chermain; Paterson, Pauline; Larson, Heidi J

Validation of a host blood transcriptomic biomarker for pulmonary tuberculosis in people living with HIV: a prospective diagnostic and prognostic accuracy study. (2021) Mendelsohn, Simon C; Fiore-Gartland, Andrew; Penn-Nicholson, Adam; Mulenga, Humphrey; Mbandi, Stanley Kimbung; Borate, Bhavesh; Hadley, Katie; Hikuam, Chris; Musvosvi, Munyaradzi; Bilek, Nicole; Erasmus, Mzwandile; Jaxa, Lungisa; Raphela, Rodney; Nombida, Onke; Kaskar, Masooda; Sumner, Tom; White, Richard G; Innes, Craig; Brumskine, William; Hiemstra, Andriëtte; Malherbe, Stephanus T; Hassan-Moosa, Razia; Tameris, Michèle; Walzl, Gerhard; Naidoo, Kogieleum; Churchyard, Gavin; Scriba, Thomas J; Hatherill, Mark; CORTIS-HR Study Team

Climate services for health: From global observations to local interventions. (2021) Fletcher, Isabel K; Stewart-Ibarra, Anna M; García-Díez, Markel; Shumake-Guillemot, Joy; Lowe, Rachel

Military coup during COVID-19 pandemic and health crisis in Myanmar. (2021) Han, Su Myat; Lwin, Kaung Suu; Swe, Khin Thet; Gilmour, Stuart; Nomura, Shuhei

Large-scale survey of parental antibiotic use for paediatric upper respiratory tract infections in China: implications for stewardship programmes and national policy. (2021) Lin, Leesa; Harbarth, Stephan; Hargreaves, James R; Zhou, Xudong; Li, Leah

Modelling intensive care unit capacity under different epidemiological scenarios of the COVID-19 pandemic in three Western European countries. (2021) McCabe, Ruth; Kont, Mara D; Schmit, Nora; Whittaker, Charles; Løchen, Alessandra; Baguelin, Marc; Knock, Edward; Whittles, Lilith K; Lees, John; Brazeau, Nicholas F; Walker, Patrick Gt; Ghani, Azra C; Ferguson, Neil M; White, Peter J; Donnelly, Christl A; Hauck, Katharina; Watson, Oliver J

Association of SARS-CoV-2 clades with clinical, inflammatory and virologic outcomes: An observational study. (2021) Young, Barnaby E; Wei, Wycliffe E; Fong, Siew-Wai; Mak, Tze-Minn; Anderson, Danielle E; Chan, Yi-Hao; Pung, Rachael; Heng, Cheryl Sy; Ang, Li Wei; Zheng, Adrian Kang Eng; Lee, Bernett; Kalimuddin, Shirin; Pada, Surinder; Tambyah, Paul A; Parthasarathy, Purnima; Tan, Seow Yen; Sun, Louisa; Smith, Gavin Jd; Lin, Raymond Tzer Pin; Leo, Yee-Sin; Renia, Laurent; Wang, Lin-Fa; Ng, Lisa Fp; Maurer-Stroh, Sebastian; Lye, David Chien; Lee, Vernon J

An outbreak of acute jaundice syndrome (AJS) among the Rohingya refugees in Cox's Bazar, Bangladesh: Findings from enhanced epidemiological surveillance. (2021) Mazhar, Md Khadimul Anam; Finger, Flavio; Evers, Egmond Samir; Kuehne, Anna; Ivey, Melissa; Yesurajan, Francis; Shirin, Tahmina; Ajim, Nurul; Kabir, Ahammadul; Musto, Jennie; White, Kate; Baidjoe, Amrish; le Polain de Waroux, Olivier

Is there an association between long-term antibiotics for acne and subsequent infection sequelae and antimicrobial resistance? A systematic review. (2021) Bhate, Ketaki; Lin, Liang-Yu; Barbieri, John S; Leyrat, Clémence; Hopkins, Susan; Stabler, Richard; Shallcross, Laura; Smeeth, Liam; Francis, Nick; Mathur, Rohini; Langan, Sinéad M; Sinnott, Sarah-Jo picture_as_pdf

Assortative social mixing and sex disparities in tuberculosis burden. (2021) Shaweno, Debebe; Horton, Katherine C; Hayes, Richard J; Dodd, Peter J

Entry of dengue virus serotypes and their geographic distribution in Brazilian federative units: a systematic review. (2021) Bezerra, Juliana Maria Trindade; Sousa, Selma Costa de; Tauil, Pedro Luiz; Carneiro, Mariângela; Barbosa, David Soeiro

Effects of Hot Nights on Mortality in Southern Europe. (2021) Royé, Dominic; Sera, Francesco; Tobías, Aurelio; Lowe, Rachel; Gasparrini, Antonio; Pascal, Mathilde; de'Donato, Francesca; Nunes, Baltazar; Teixeira, Joao Paulo

The impact of COVID-19 on global tuberculosis control. (2021) Lipman, Marc; McQuaid, C Finn; Abubakar, Ibrahim; Khan, Mishal; Kranzer, Katharina; McHugh, Timothy D; Padmapriyadarsini, Chandrasekaran; Rangaka, Molebogeng X; Stoker, Neil

Combined effects of hydrometeorological hazards and urbanisation on dengue risk in Brazil: a spatiotemporal modelling study. (2021) Lowe, Rachel; Lee, Sophie A; O'Reilly, Kathleen M; Brady, Oliver J; Bastos, Leonardo; Carrasco-Escobar, Gabriel; de Castro Catão, Rafael; Colón-González, Felipe J; Barcellos, Christovam; Carvalho, Marilia Sá; Blangiardo, Marta; Rue, Håvard; Gasparrini, Antonio

Testing for SARS-CoV-2 at the core of voluntary collective isolation: Lessons from the indigenous populations living in the Amazon region in Ecuador. (2021) Ortiz-Prado, Esteban; Rivera-Olivero, Ismar A; Freire-Paspuel, Byron; Lowe, Rachel; Lozada, Tannya; Henriquez-Trujillo, Aquiles R; Garcia-Bereguiain, Miguel Angel; UDLA COVID-19 Team

Climate change risk communication: a vaccine hesitancy perspective. (2021) Paterson, Pauline; Clarke, Richard M

The COVID-19 Pandemic in Peru: What Went Wrong? (2021) Schwalb, Alvaro; Seas, Carlos

Vaccine Hesitancy: COVID-19 and Influenza Vaccine Willingness among Parents in Wuxi, China-A Cross-Sectional Study. (2021) Wang, Qiang; Xiu, Shixin; Zhao, Shuangyu; Wang, Jianli; Han, Ying; Dong, Shuheng; Huang, Jinxin; Cui, Tingting; Yang, Liuqing; Shi, Naiyang; Liu, Minqi; Han, Yue; Wang, Xuwen; Shen, Yuan; Chen, Enpin; Lu, Bing; Jin, Hui; Lin, Leesa

Cost-effectiveness of emergency preparedness measures in response to infectious respiratory disease outbreaks: a systematic review and econometric analysis. (2021) Vardavas, Constantine; Nikitara, Katerina; Zisis, Konstantinos; Athanasakis, Konstantinos; Phalkey, Revati; Leonardi-Bee, Jo; Johnson, Helen; Tsolova, Svetla; Ciotti, Massimo; Suk, Jonathan E

Boosting understanding of Lassa Fever virus epidemiology: Field testing a novel assay to identify past Lassa Fever virus infection in blood and oral fluids of survivors and unexposed controls in Sierra Leone. (2021) Akpogheneta, Onome; Dicks, Steve; Grant, Donald; Kanneh, Zainab; Jusu, Brima; Edem-Hotah, Joseph; Kanneh, Lansana; Alhasan, Foday; Gbakie, Michael; Schieffelin, John; Ijaz, Samreen; Tedder, Richard; Bower, Hilary

Vaccination as a Control Tool in Bovine Tuberculosis: Social Media Monitoring to Assess Public Response to Government Policy Development and Implementation. (2021) Dicks, Frederika; Marks, Tatjana; Karafillakis, Emilie; Chambers, Mark A

Analysis of temporal trends in potential COVID-19 cases reported through NHS Pathways England. (2021) Leclerc, Quentin J; Nightingale, Emily S; Abbott, Sam; CMMID COVID-19 Working Group; Jombart, Thibaut

The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study. (2021) Leng, Trystan; White, Connor; Hilton, Joe; Kucharski, Adam; Pellis, Lorenzo; Stage, Helena; Davies, Nicholas G; Centre for Mathematical Modelling of Infectious Disease 2019 nCo; Keeling, Matt J; Flasche, Stefan

The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study. (2021) Leng, Trystan; White, Connor; Hilton, Joe; Kucharski, Adam; Pellis, Lorenzo; Stage, Helena; Davies, Nicholas G; Keeling, Matt J; Flasche, Stefan

The impact of COVID-19 on TB: a review of the data. (2021) McQuaid, CF; Vassall, A; Cohen, T; Fiekert, K; White, RG

Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England. (2021) Munday, James D; Sherratt, Katharine; Meakin, Sophie; Endo, Akira; Pearson, Carl AB; Hellewell, Joel; Abbott, Sam; Bosse, Nikos I; CMMID COVID-19 Working Group; Atkins, Katherine E; Wallinga, Jacco; Edmunds, W John; van Hoek, Albert Jan; Funk, Sebastian

Does Ghana's National Health Insurance Scheme provide financial protection to tuberculosis patients and their households? (2021) Pedrazzoli, Debora; Carter, Daniel J; Borghi, Josephine; Laokri, Samia; Boccia, Delia; Houben, Rein Mgj

Age groups that sustain resurging COVID-19 epidemics in the United States. (2021) Monod, Mélodie; Blenkinsop, Alexandra; Xi, Xiaoyue; Hebert, Daniel; Bershan, Sivan; Tietze, Simon; Baguelin, Marc; Bradley, Valerie C; Chen, Yu; Coupland, Helen; Filippi, Sarah; Ish-Horowicz, Jonathan; McManus, Martin; Mellan, Thomas; Gandy, Axel; Hutchinson, Michael; Unwin, H Juliette T; van Elsland, Sabine L; Vollmer, Michaela AC; Weber, Sebastian; Zhu, Harrison; Bezancon, Anne; Ferguson, Neil M; Mishra, Swapnil; Flaxman, Seth; Bhatt, Samir; Ratmann, Oliver; Imperial College COVID-19 Response Team

Competition between RSV and influenza: Limits of modelling inference from surveillance data. (2021) Waterlow, Naomi R; Flasche, Stefan; Minter, Amanda; Eggo, Rosalind M

Spatiotemporal dynamics and risk estimates of COVID-19 epidemic in Minas Gerais State: analysis of an expanding process. (2021) Coura-Vital, Wendel; Cardoso, Diogo Tavares; Ker, Fabricio Thomaz de Oliveira; Magalhães, Fernanda do Carmo; Bezerra, Juliana Maria Trindade; Viegas, Ana Maria; Morais, Maria Helena Franco; Bastos, Leonardo Soares; Reis, Ilka Afonso; Carneiro, Mariângela; Barbosa, David Soeiro

Impact of COVID-19 on tuberculosis notifications in Blantyre Malawi: an interrupted time series analysis and qualitative study with healthcare workers. (2021) Soko, Rebecca Nzawa; Burke, Rachael M; Feasey, Helena RA; Sibande, Wakumanya; Nliwasa, Marriott; Henrion, Marc YR; Khundi, McEwen; Dodd, Peter J; Ku, Chu Chang; Kawalazira, Gift; Choko, Augustine T; Divala, Titus H; Corbett, Elizabeth L; MacPherson, Peter

Vaccine safety in the next decade: why we need new modes of trust building. (2021) Larson, Heidi J; Sahinovic, Isabelle; Balakrishnan, Madhava Ram; Simas, Clarissa

Model-based estimation of the economic burden of cholera in Africa. (2021) Mogasale, Vittal; Ngogoyo, Samuel Mwaura; Mogasale, Vijayalaxmi V

Data-driven analyses of behavioral strategies to eliminate cysticercosis in sub-Saharan Africa. (2021) Skrip, Laura A; Dermauw, Veronique; Dorny, Pierre; Ganaba, Rasmané; Millogo, Athanase; Tarnagda, Zékiba; Carabin, Hélène

If Not COVID-19 What Is It? Analysis of COVID-19 versus Common Respiratory Viruses among Symptomatic Health Care Workers in a Tertiary Infectious Disease Referral Hospital in Manila, Philippines. (2021) Agrupis, Kristal An; Villanueva, Annavi Marie G; Sayo, Ana Ria; Lazaro, Jezreel; Han, Su Myat; Celis, Alyannah C; Suzuki, Shuichi; Uichanco, Ann Celestyn; Sagurit, Jocelyn; Solante, Rontgene; Yoshida, Lay-Myint; Ariyoshi, Koya; Smith, Chris

Community transmission of multidrug-resistant tuberculosis is associated with activity space overlap in Lima, Peru. (2021) Bui, David P; Chandran, Shruthi S; Oren, Eyal; Brown, Heidi E; Harris, Robin B; Knight, Gwenan M; Grandjean, Louis

Association between living with children and outcomes from covid-19: OpenSAFELY cohort study of 12 million adults in England. (2021) Forbes, Harriet; Morton, Caroline E; Bacon, Seb; McDonald, Helen I; Minassian, Caroline; Brown, Jeremy P; Rentsch, Christopher T; Mathur, Rohini; Schultze, Anna; DeVito, Nicholas J; MacKenna, Brian; Hulme, William J; Croker, Richard; Walker, Alex J; Williamson, Elizabeth J; Bates, Chris; Mehrkar, Amir; Curtis, Helen J; Evans, David; Wing, Kevin; Inglesby, Peter; Drysdale, Henry; Wong, Angel YS; Cockburn, Jonathan; McManus, Robert; Parry, John; Hester, Frank; Harper, Sam; Douglas, Ian J; Smeeth, Liam; Evans, Stephen JW; Bhaskaran, Krishnan; Eggo, Rosalind M; Goldacre, Ben; Tomlinson, Laurie A

Case fatality risk of the SARS-CoV-2 variant of concern B.1.1.7 in England, 16 November to 5 February. (2021) Grint, Daniel J; Wing, Kevin; Williamson, Elizabeth; McDonald, Helen I; Bhaskaran, Krishnan; Evans, David; Evans, Stephen Jw; Walker, Alex J; Hickman, George; Nightingale, Emily; Schultze, Anna; Rentsch, Christopher T; Bates, Chris; Cockburn, Jonathan; Curtis, Helen J; Morton, Caroline E; Bacon, Sebastian; Davy, Simon; Wong, Angel Ys; Mehrkar, Amir; Tomlinson, Laurie; Douglas, Ian J; Mathur, Rohini; Blomquist, Paula; MacKenna, Brian; Ingelsby, Peter; Croker, Richard; Parry, John; Hester, Frank; Harper, Sam; DeVito, Nicholas J; Hulme, Will; Tazare, John; Goldacre, Ben; Smeeth, Liam; Eggo, Rosalind M

The potential health and economic value of SARS-CoV-2 vaccination alongside physical distancing in the UK: a transmission model-based future scenario analysis and economic evaluation. (2021) Sandmann, Frank G; Davies, Nicholas G; Vassall, Anna; Edmunds, W John; Jit, Mark; Centre for the Mathematical Modelling of Infectious Diseases COV

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Setting-specific Transmission Rates: A Systematic Review and Meta-analysis. (2021) Thompson, Hayley A; Mousa, Andria; Dighe, Amy; Fu, Han; Arnedo-Pena, Alberto; Barrett, Peter; Bellido-Blasco, Juan; Bi, Qifang; Caputi, Antonio; Chaw, Liling; De Maria, Luigi; Hoffmann, Matthias; Mahapure, Kiran; Ng, Kangqi; Raghuram, Jagadesan; Singh, Gurpreet; Soman, Biju; Soriano, Vicente; Valent, Francesca; Vimercati, Luigi; Wee, Liang En; Wong, Justin; Ghani, Azra C; Ferguson, Neil M picture_as_pdf

Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7. (2021) Davies, Nicholas G; Jarvis, Christopher I; CMMID COVID-19 Working Group; Edmunds, W John; Jewell, Nicholas P; Diaz-Ordaz, Karla; Keogh, Ruth H

Interactions between timing and transmissibility explain diverse flavivirus dynamics in Fiji. (2021) Henderson, Alasdair D; Kama, Mike; Aubry, Maite; Hue, Stephane; Teissier, Anita; Naivalu, Taina; Bechu, Vinaisi D; Kailawadoko, Jimaima; Rabukawaqa, Isireli; Sahukhan, Aalisha; Hibberd, Martin L; Nilles, Eric J; Funk, Sebastian; Whitworth, Jimmy; Watson, Conall H; Lau, Colleen L; Edmunds, W John; Cao-Lormeau, Van-Mai; Kucharski, Adam J

Epidemiological, clinical, and public health response characteristics of a large outbreak of diphtheria among the Rohingya population in Cox's Bazar, Bangladesh, 2017 to 2019: A retrospective study. (2021) Polonsky, Jonathan A; Ivey, Melissa; Mazhar, Md Khadimul Anam; Rahman, Ziaur; le Polain de Waroux, Olivier; Karo, Basel; Jalava, Katri; Vong, Sirenda; Baidjoe, Amrish; Diaz, Janet; Finger, Flavio; Habib, Zakir H; Halder, Charls Erik; Haskew, Christopher; Kaiser, Laurent; Khan, Ali S; Sangal, Lucky; Shirin, Tahmina; Zaki, Quazi Ahmed; Salam, Md Abdus; White, Kate

UK prevalence of underlying conditions which increase the risk of severe COVID-19 disease: a point prevalence study using electronic health records. (2021) Walker, Jemma L; Grint, Daniel J; Strongman, Helen; Eggo, Rosalind M; Peppa, Maria; Minassian, Caroline; Mansfield, Kathryn E; Rentsch, Christopher T; Douglas, Ian J; Mathur, Rohini; Wong, Angel YS; Quint, Jennifer K; Andrews, Nick; Bernal, Jamie Lopez; Scott, J Anthony; Ramsay, Mary; Smeeth, Liam; McDonald, Helen I

Affordability of Adult Tuberculosis Vaccination in India and China: A Dynamic Transmission Model-Based Analysis. (2021) Weerasuriya, Chathika Krishan; Harris, Rebecca Claire; Quaife, Matthew; McQuaid, Christopher Finn; White, Richard G; Gomez, Gabriela B

Comparison of Public Responses to Containment Measures During the Initial Outbreak and Resurgence of COVID-19 in China: Infodemiology Study. (2021) Zhou, Xinyu; Song, Yi; Jiang, Hao; Wang, Qian; Qu, Zhiqiang; Zhou, Xiaoyu; Jit, Mark; Hou, Zhiyuan; Lin, Leesa

Ethnic Differences in Dementia Risk: A Systematic Review and Meta-Analysis. (2021) Shiekh, Suhail Ismail; Cadogan, Sharon Louise; Lin, Liang-Yu; Mathur, Rohini; Smeeth, Liam; Warren-Gash, Charlotte

Author Correction: Measuring the impact of COVID-19 vaccine misinformation on vaccination intent in the UK and USA. (2021) Loomba, Sahil; de Figueiredo, Alexandre; Piatek, Simon J; de Graaf, Kristen; Larson, Heidi J

Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data. (2021) Munday, James D; I Jarvis, Christopher; Gimma, Amy; Wong, Kerry LM; Zandvoort, Kevin van; Funk, Sebastian; Edmunds, W John

Correcting COVID-19 vaccine misinformation: Lancet Commission on COVID-19 Vaccines and Therapeutics Task Force Members. (2021) Hotez, Peter; Batista, Carolina; Ergonul, Onder; Figueroa, J Peter; Gilbert, Sarah; Gursel, Mayda; Hassanain, Mazen; Kang, Gagandeep; Kim, Jerome H; Lall, Bhavna; Larson, Heidi; Naniche, Denise; Sheahan, Timothy; Shoham, Shmuel; Wilder-Smith, Annelies; Strub-Wourgaft, Nathalie; Yadav, Prashant; Bottazzi, Maria Elena

Differences in clinical severity of respiratory viral infections in hospitalized children. (2021) Althouse, Benjamin M; Flasche, Stefan; Toizumi, Michiko; Nguyen, Hien-Anh Thi; Vo, Hien Minh; Le, Minh Nhat; Hashizume, Masahiro; Ariyoshi, Koya; Anh, Dang Duc; Rodgers, Gail L; Klugman, Keith P; Hu, Hao; Yoshida, Lay-Myint

Probabilistic seasonal dengue forecasting in Vietnam: A modelling study using superensembles. (2021) Colón-González, Felipe J; Soares Bastos, Leonardo; Hofmann, Barbara; Hopkin, Alison; Harpham, Quillon; Crocker, Tom; Amato, Rosanna; Ferrario, Iacopo; Moschini, Francesca; James, Samuel; Malde, Sajni; Ainscoe, Eleanor; Sinh Nam, Vu; Quang Tan, Dang; Duc Khoa, Nguyen; Harrison, Mark; Tsarouchi, Gina; Lumbroso, Darren; Brady, Oliver J; Lowe, Rachel

Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England. (2021) Davies, Nicholas G; Abbott, Sam; Barnard, Rosanna C; Jarvis, Christopher I; Kucharski, Adam J; Munday, James D; Pearson, Carl AB; Russell, Timothy W; Tully, Damien C; Washburne, Alex D; Wenseleers, Tom; Gimma, Amy; Waites, William; Wong, Kerry LM; van Zandvoort, Kevin; Silverman, Justin D; CMMID COVID-19 Working Group; COVID-19 Genomics UK (COG-UK) Consortium; Diaz-Ordaz, Karla; Keogh, Ruth; Eggo, Rosalind M; Funk, Sebastian; Jit, Mark; Atkins, Katherine E; Edmunds, W John

Effectiveness and cost-effectiveness of eliminating cervical cancer through a tailored optimal pathway: a modeling study. (2021) Xia, Changfa; Xu, Xiaoqian; Zhao, Xuelian; Hu, Shangying; Qiao, Youlin; Zhang, Yong; Hutubessy, Raymond; Basu, Partha; Broutet, Nathalie; Jit, Mark; Zhao, Fanghui

Risk of symptomatic COVID-19 due to aircraft transmission: a retrospective cohort study of contact-traced flights during England's containment phase. (2021) Blomquist, Paula Bianca; Bolt, Hikaru; Packer, Simon; Schaefer, Ulf; Platt, Steven; Dabrera, Gavin; Gobin, Maya; Oliver, Isabel

Age-related risk of household transmission of COVID-19 in Singapore. (2021) Pung, Rachael; Park, Minah; Cook, Alex R; Lee, Vernon J

Monitoring of human coronaviruses in Belgian primary care and hospitals, 2015-20: a surveillance study. (2021) Fischer, Natalie; Dauby, Nicolas; Bossuyt, Nathalie; Reynders, Marijke; Gérard, Michèle; Lacor, Patrick; Daelemans, Siel; Lissoir, Bénédicte; Holemans, Xavier; Magerman, Koen; Jouck, Door; Bourgeois, Marc; Delaere, Bénédicte; Quoilin, Sophie; Van Gucht, Steven; Thomas, Isabelle; Barbezange, Cyril; Subissi, Lorenzo

From cervical cancer elimination to eradication of vaccine-type human papillomavirus: Feasibility, public health strategies and cost-effectiveness. (2021) Jit, Mark; Prem, Kiesha; Benard, Elodie; Brisson, Marc

Volatility of vaccine confidence. (2021) Larson, Heidi J; Broniatowski, David A

A descriptive analysis of antimicrobial resistance patterns of WHO priority pathogens isolated in children from a tertiary care hospital in India. (2021) Mogasale, Vijayalaxmi V; Saldanha, Prakash; Pai, Vidya; Rekha, PD; Mogasale, Vittal

Access to Vaccination Information and Confidence/Hesitancy Towards Childhood Vaccination: A Cross-Sectional Survey in China. (2021) Du, Fanxing; Chantler, Tracey; Francis, Mark R; Sun, Fiona Yueqian; Zhang, Xuan; Han, Kaiyi; Rodewald, Lance; Yu, Hongjie; Tu, Shiyi; Larson, Heidi; Hou, Zhiyuan picture_as_pdf

The epidemiologic impact and cost-effectiveness of new tuberculosis vaccines on multidrug-resistant tuberculosis in India and China. (2021) Weerasuriya, Chathika K; Harris, Rebecca C; McQuaid, C Finn; Bozzani, Fiammetta; Ruan, Yunzhou; Li, Renzhong; Li, Tao; Rade, Kirankumar; Rao, Raghuram; Ginsberg, Ann M; Gomez, Gabriela B; White, Richard G

Population Response to Air Pollution and the Risk of Coronavirus Disease in Chinese Cities during the Early Pandemic Period. (2021) Yoon, Miryoung; Kim, Jong-Hun; Sung, Jisun; Lim, Ah-Young; Hwang, Myung-Jae; Kim, Eun-Hye; Cheong, Hae-Kwan

The impact of local and national restrictions in response to COVID-19 on social contacts in England: a longitudinal natural experiment. (2021) Jarvis, Christopher I; Gimma, Amy; van Zandvoort, Kevin; Wong, Kerry LM; CMMID COVID-19 working group; Edmunds, W John

Global and national estimates of the number of healthcare workers at high risk of SARS-CoV-2 infection. (2021) McCarthy, CV; Sandmann, FG; CMMID COVID-19 Working Group; Jit, M

Indirect acute effects of the COVID-19 pandemic on physical and mental health in the UK: a population-based study. (2021) Mansfield, Kathryn E; Mathur, Rohini; Tazare, John; Henderson, Alasdair D; Mulick, Amy R; Carreira, Helena; Matthews, Anthony A; Bidulka, Patrick; Gayle, Alicia; Forbes, Harriet; Cook, Sarah; Wong, Angel YS; Strongman, Helen; Wing, Kevin; Warren-Gash, Charlotte; Cadogan, Sharon L; Smeeth, Liam; Hayes, Joseph F; Quint, Jennifer K; McKee, Martin; Langan, Sinéad M

Trust and transparency in times of crisis: Results from an online survey during the first wave (April 2020) of the COVID-19 epidemic in the UK. (2021) Enria, Luisa; Waterlow, Naomi; Rogers, Nina Trivedy; Brindle, Hannah; Lal, Sham; Eggo, Rosalind M; Lees, Shelley; Roberts, Chrissy H picture_as_pdf

Antimicrobial resistance and COVID-19: Intersections and implications. (2021) Knight, Gwenan M; Glover, Rebecca E; McQuaid, C Finn; Olaru, Ioana D; Gallandat, Karin; Leclerc, Quentin J; Fuller, Naomi M; Willcocks, Sam J; Hasan, Rumina; van Kleef, Esther; Chandler, Clare Ir picture_as_pdf

Challenges in ensuring global access to COVID-19 vaccines: production, affordability, allocation, and deployment. (2021) Wouters, Olivier J; Shadlen, Kenneth C; Salcher-Konrad, Maximilian; Pollard, Andrew J; Larson, Heidi J; Teerawattananon, Yot; Jit, Mark

Methods for Social Media Monitoring Related to Vaccination: Systematic Scoping Review. (2021) Karafillakis, Emilie; Martin, Sam; Simas, Clarissa; Olsson, Kate; Takacs, Judit; Dada, Sara; Larson, Heidi Jane

The impact of non-pharmaceutical interventions on SARS-CoV-2 transmission across 130 countries and territories. (2021) Liu, Yang; Morgenstern, Christian; Kelly, James; Lowe, Rachel; CMMID COVID-19 Working Group; Jit, Mark

Measuring the impact of COVID-19 vaccine misinformation on vaccination intent in the UK and USA. (2021) Loomba, Sahil; de Figueiredo, Alexandre; Piatek, Simon J; de Graaf, Kristen; Larson, Heidi J

Factors associated with delayed presentation to healthcare facilities for Lassa fever cases, Nigeria 2019: a retrospective cohort study. (2021) Chandra, Nastassya L; Bolt, Hikaru; Dan-Nwafor, Chioma; Ipadeola, Oladipupo; Ilori, Elsie; Namara, Geoffrey; Olayinka, Adebola T; Ukponu, Winifred; Iniobong, Akanimo; Amedu, Michael; Akano, Adejoke; Akabike, Kachikwulu O; Okhuarobo, Uwaifiokun; Fagbemi, Stephen; Sampson, Emeka; Newitt, Sophie; Verlander, Neville Q; Bausch, Daniel G; le Polain de Waroux, Olivier; Ihekweazu, Chikwe

The effectiveness of biosecurity interventions in reducing the transmission of bacteria from livestock to humans at the farm level: A systematic literature review. (2021) Youssef, Dina Mohamed; Wieland, Barbara; Knight, Gwenan M; Lines, Jo; Naylor, Nichola R

Extremely high SARS-CoV-2 seroprevalence in a strictly-Orthodox Jewish community in the UK. (2021) Gaskell, Katherine M; Johnson, Marina; Gould, Victoria; Hunt, Adam; Stone, Neil RH; Waites, William; Kasstan, Ben; Chantler, Tracey; Lal, Sham; Roberts, Chrissy H; Goldblatt, David; Eggo, Rosalind M; Marks, Michael

The importance of supplementary immunisation activities to prevent measles outbreaks during the COVID-19 pandemic in Kenya. (2021) Mburu, CN; Ojal, J; Chebet, R; Akech, D; Karia, B; Tuju, J; Sigilai, A; Abbas, K; Jit, M; Funk, S; Smits, G; van Gageldonk, PGM; van der Klis, FRM; Tabu, C; Nokes, DJ; LSHTM CMMID COVID-19 Working Group; Scott, Jag; Flasche, S; Adetifa, Imo

The importance of supplementary immunisation activities to prevent measles outbreaks during the COVID-19 pandemic in Kenya. (2021) Mburu, CN; Ojal, J; Chebet, R; Akech, D; Karia, B; Tuju, J; Sigilai, A; Abbas, K; Jit, M; Funk, S; Smits, G; van Gageldonk, PGM; van der Klis, FRM; Tabu, C; Nokes, DJ; Scott, JAG; Flasche, S; Adetifa, IMO

What role is there for 'nudging' clinicians? (2021) Pettigrew, Luisa M; Mays, Nicholas

Retrospective cohort study to investigate the 10-year trajectories of disease patterns in patients with hypertension and/or diabetes mellitus on subsequent cardiovascular outcomes and health service utilisation: a study protocol. (2021) Wan, Eric Yuk Fai; Chin, Weng Yee; Yu, Esther Yee Tak; Chen, Julie; Tse, Emily Tsui Yee; Wong, Carlos King Ho; Ha, Tony King Hang; Chao, David Vai Kiong; Tsui, Wendy Wing Sze; Lam, Cindy Lo Kuen

Estimating the health impact of vaccination against ten pathogens in 98 low-income and middle-income countries from 2000 to 2030: a modelling study. (2021) Li, Xiang; Mukandavire, Christinah; Cucunubá, Zulma M; Echeverria Londono, Susy; Abbas, Kaja; Clapham, Hannah E; Jit, Mark; Johnson, Hope L; Papadopoulos, Timos; Vynnycky, Emilia; Brisson, Marc; Carter, Emily D; Clark, Andrew; de Villiers, Margaret J; Eilertson, Kirsten; Ferrari, Matthew J; Gamkrelidze, Ivane; Gaythorpe, Katy AM; Grassly, Nicholas C; Hallett, Timothy B; Hinsley, Wes; Jackson, Michael L; Jean, Kévin; Karachaliou, Andromachi; Klepac, Petra; Lessler, Justin; Li, Xi; Moore, Sean M; Nayagam, Shevanthi; Nguyen, Duy Manh; Razavi, Homie; Razavi-Shearer, Devin; Resch, Stephen; Sanderson, Colin; Sweet, Steven; Sy, Stephen; Tam, Yvonne; Tanvir, Hira; Tran, Quan Minh; Trotter, Caroline L; Truelove, Shaun; van Zandvoort, Kevin; Verguet, Stéphane; Walker, Neff; Winter, Amy; Woodruff, Kim; Ferguson, Neil M; Garske, Tini; Vaccine Impact Modelling Consortium

Towards Societies Living with COVID-19. (2021) Piot, Peter; Spencer, Julia

Improving our understanding of the disproportionate incidence of STIs in heterosexual-identifying people of black Caribbean heritage: findings from a longitudinal study of sexual health clinic attendees in England. (2021) Bardsley, Megan; Wayal, Sonali; Blomquist, Paula; Mohammed, Hamish; Mercer, Catherine H; Hughes, Gwenda

Transmission dynamics and control measures of COVID-19 outbreak in China: a modelling study. (2021) Zhang, Xu-Sheng; Vynnycky, Emilia; Charlett, Andre; De Angelis, Daniela; Chen, Zhengji; Liu, Wei

Malaria in Southern Venezuela: The hottest hotspot in Latin America. (2021) Grillet, Maria Eugenia; Moreno, Jorge E; Hernández-Villena, Juan V; Vincenti-González, Maria F; Noya, Oscar; Tami, Adriana; Paniz-Mondolfi, Alberto; Llewellyn, Martin; Lowe, Rachel; Escalante, Ananías A; Conn, Jan E

Biomarker-guided tuberculosis preventive therapy (CORTIS): a randomised controlled trial. (2021) Scriba, Thomas J; Fiore-Gartland, Andrew; Penn-Nicholson, Adam; Mulenga, Humphrey; Kimbung Mbandi, Stanley; Borate, Bhavesh; Mendelsohn, Simon C; Hadley, Katie; Hikuam, Chris; Kaskar, Masooda; Musvosvi, Munyaradzi; Bilek, Nicole; Self, Steven; Sumner, Tom; White, Richard G; Erasmus, Mzwandile; Jaxa, Lungisa; Raphela, Rodney; Innes, Craig; Brumskine, William; Hiemstra, Andriëtte; Malherbe, Stephanus T; Hassan-Moosa, Razia; Tameris, Michèle; Walzl, Gerhard; Naidoo, Kogieleum; Churchyard, Gavin; Hatherill, Mark; CORTIS-01 Study Team

Optimising Vaccine Dose in Inoculation against SARS-CoV-2, a Multi-Factor Optimisation Modelling Study to Maximise Vaccine Safety and Efficacy. (2021) Benest, John; Rhodes, Sophie; Quaife, Matthew; Evans, Thomas G; White, Richard G

An open label, randomised controlled trial of rifapentine versus rifampicin based short course regimens for the treatment of latent tuberculosis in England: the HALT LTBI pilot study. (2021) Surey, J; Stagg, HR; Yates, TA; Lipman, M; White, PJ; Charlett, A; Muñoz, L; Gosce, L; Rangaka, MX; Francis, M; Hack, V; Kunst, H; Abubakar, I

Use of non-steroidal anti-inflammatory drugs and risk of death from COVID-19: an OpenSAFELY cohort analysis based on two cohorts. (2021) Wong, Angel Ys; MacKenna, Brian; Morton, Caroline E; Schultze, Anna; Walker, Alex J; Bhaskaran, Krishnan; Brown, Jeremy P; Rentsch, Christopher T; Williamson, Elizabeth; Drysdale, Henry; Croker, Richard; Bacon, Seb; Hulme, William; Bates, Chris; Curtis, Helen J; Mehrkar, Amir; Evans, David; Inglesby, Peter; Cockburn, Jonathan; McDonald, Helen I; Tomlinson, Laurie; Mathur, Rohini; Wing, Kevin; Forbes, Harriet; Eggo, Rosalind M; Parry, John; Hester, Frank; Harper, Sam; Evans, Stephen Jw; Smeeth, Liam; Douglas, Ian J; Goldacre, Ben; OpenSAFELY Collaborative

Rational policymaking during a pandemic. (2021) Berger, Loïc; Berger, Nicolas; Bosetti, Valentina; Gilboa, Itzhak; Hansen, Lars Peter; Jarvis, Christopher; Marinacci, Massimo; Smith, Richard D

Who should be prioritized for COVID-19 vaccination in China? A descriptive study. (2021) Yang, Juan; Zheng, Wen; Shi, Huilin; Yan, Xuemei; Dong, Kaige; You, Qian; Zhong, Guangjie; Gong, Hui; Chen, Zhiyuan; Jit, Mark; Viboud, Cecile; Ajelli, Marco; Yu, Hongjie

Implication of backward contact tracing in the presence of overdispersed transmission in COVID-19 outbreaks. (2021) Endo, Akira; Centre for the Mathematical Modelling of Infectious Diseases COV; Leclerc, Quentin J; Knight, Gwenan M; Medley, Graham F; Atkins, Katherine E; Funk, Sebastian; Kucharski, Adam J

Modelling the global burden of drug-resistant tuberculosis avertable by a post-exposure vaccine. (2021) Fu, Han; Lewnard, Joseph A; Frost, Isabel; Laxminarayan, Ramanan; Arinaminpathy, Nimalan

Estimating the minimum number of SARS-CoV-2 infected cases needed to detect viral RNA in wastewater: To what extent of the outbreak can surveillance of wastewater tell us? (2021) Hong, Pei-Ying; Rachmadi, Andri Taruna; Mantilla-Calderon, David; Alkahtani, Mohsen; Bashawri, Yasir M; Al Qarni, Hamed; O'Reilly, Kathleen M; Zhou, Jianqiang

The importance of local context in COVID-19 models. (2021) Eggo, Rosalind M; Dawa, Jeanette; Kucharski, Adam J; Cucunuba, Zulma M

Integrating epidemiological and genetic data with different sampling intensities into a dynamic model of respiratory syncytial virus transmission. (2021) Kombe, Ivy K; Agoti, Charles N; Munywoki, Patrick K; Baguelin, Marc; Nokes, D James; Medley, Graham F

Hepatitis C Virus Transmission Clusters in Public Health and Correctional Settings, Wisconsin, USA, 2016-20171. (2021) Hochstatter, Karli R; Tully, Damien C; Power, Karen A; Koepke, Ruth; Akhtar, Wajiha Z; Prieve, Audrey F; Whyte, Thomas; Bean, David J; Seal, David W; Allen, Todd M; Westergaard, Ryan P

Prevalence of Streptococcus pneumoniae in conjunctival flora and association with nasopharyngeal carriage among children in a Vietnamese community. (2021) Mohamed, Yasser Helmy; Toizumi, Michiko; Uematsu, Masafumi; Nguyen, Hien-Anh Thi; Le, Lien Thuy; Takegata, Mizuki; Iwasaki, Chihiro; Kitamura, Noriko; Nation, Monica L; Dunne, Eileen M; Hinds, Jason; Do, Hung Thai; Vien, Mai Quang; Satzke, Catherine; Flasche, Stefan; Mulholland, Kim; Dang, Duc-Anh; Kitaoka, Takashi; Yoshida, Lay-Myint

COVID-19's lost generation of unvaccinated children - Authors' reply. (2021) Abbas, Kaja; Procter, Simon R; Clark, Andrew; Flasche, Stefan

Distribution of vitamin D status in the UK: a cross-sectional analysis of UK Biobank. (2021) Lin, Liang-Yu; Smeeth, Liam; Langan, Sinead; Warren-Gash, Charlotte

Meningococcal carriage among Hajj pilgrims, risk factors for carriage and records of vaccination: a study of pilgrims to Mecca. (2021) Alasmari, Abrar; Houghton, Joanna; Greenwood, Brian; Heymann, David; Edwards, Phil; Larson, Heidi; Assiri, Abdullah; Ben-Rached, Fathia; Pain, Arnab; Behrens, Ron; Bustinduy, Amaya

HIV infection and COVID-19 death: a population-based cohort analysis of UK primary care data and linked national death registrations within the OpenSAFELY platform. (2021) Bhaskaran, Krishnan; Rentsch, Christopher T; MacKenna, Brian; Schultze, Anna; Mehrkar, Amir; Bates, Chris J; Eggo, Rosalind M; Morton, Caroline E; Bacon, Sebastian CJ; Inglesby, Peter; Doughlas, Ian J; Walker, Alex J; McDonald, Helen; Cockburn, Jonathan; Williamson, Elizabeth J; Evans, David; Forbes, Harriet J; Curtis, Helen J; Hulme, William J; Parry, John; Hester, Frank; Harper, Sam; Evans, Stephen JW; Smeeth, Liam; Goldacre, Ben

Genomic epidemiology of a densely sampled COVID-19 outbreak in China. (2021) Geidelberg, Lily; Boyd, Olivia; Jorgensen, David; Siveroni, Igor; Nascimento, Fabrícia F; Johnson, Robert; Ragonnet-Cronin, Manon; Fu, Han; Wang, Haowei; Xi, Xiaoyue; Chen, Wei; Liu, Dehui; Chen, Yingying; Tian, Mengmeng; Tan, Wei; Zai, Junjie; Sun, Wanying; Li, Jiandong; Li, Junhua; Volz, Erik M; Li, Xingguang; Nie, Qing

Informing Global Cost-Effectiveness Thresholds Using Country Investment Decisions: Human Papillomavirus Vaccine Introductions in 2006-2018. (2021) Jit, Mark

Integrating transcriptomics and bulk time course data into a mathematical framework to describe and predict therapeutic resistance in cancer. (2021) Johnson, Kaitlyn E; Howard, Grant R; Morgan, Daylin; Brenner, Eric A; Gardner, Andrea L; Durrett, Russell E; Mo, William; Al'Khafaji, Aziz; Sontag, Eduardo D; Jarrett, Angela M; Yankeelov, Thomas E; Brock, Amy

Intense transmission of visceral leishmaniasis in a region of northeastern Brazil: a situation analysis after the discontinuance of a zoonosis control program. (2021) Nogueira, Ranielly Araujo; Lira, Maria Gabriela Sampaio; Santos, Sarah Ingrid Pinto; Mondêgo-Oliveira, Renata; Andrade, Fábio Henrique Evangelista de; Sousa, Eduardo Martins de; Barbosa, David Soeiro; Abreu-Silva, Ana Lucia; Carvalho, Rafael Cardoso

Epidemiological, socio-demographic and clinical features of the early phase of the COVID-19 epidemic in Ecuador. (2021) Ortiz-Prado, Esteban; Simbaña-Rivera, Katherine; Barreno, Lenin Gómez; Diaz, Ana Maria; Barreto, Alejandra; Moyano, Carla; Arcos, Vannesa; Vásconez-González, Eduardo; Paz, Clara; Simbaña-Guaycha, Fernanda; Molestina-Luzuriaga, Martin; Fernández-Naranjo, Raúl; Feijoo, Javier; Henriquez-Trujillo, Aquiles R; Adana, Lila; López-Cortés, Andrés; Fletcher, Isabel; Lowe, Rachel

Effect of internationally imported cases on internal spread of COVID-19: a mathematical modelling study. (2021) Russell, Timothy W; Wu, Joseph T; Clifford, Sam; Edmunds, W John; Kucharski, Adam J; Jit, Mark; Centre for the Mathematical Modelling of Infectious Diseases COV

Commentary on the use of the reproduction number R during the COVID-19 pandemic. (2021) Vegvari, Carolin; Abbott, Sam; Ball, Frank; Brooks-Pollock, Ellen; Challen, Robert; Collyer, Benjamin S; Dangerfield, Ciara; Gog, Julia R; Gostic, Katelyn M; Heffernan, Jane M; Hollingsworth, T Déirdre; Isham, Valerie; Kenah, Eben; Mollison, Denis; Panovska-Griffiths, Jasmina; Pellis, Lorenzo; Roberts, Michael G; Scalia Tomba, Gianpaolo; Thompson, Robin N; Trapman, Pieter

The impact of surveillance and other factors on detection of emergent and circulating vaccine derived polioviruses. (2021) Auzenbergs, Megan; Fountain, Holly; Macklin, Grace; Lyons, Hil; O'Reilly, Kathleen M

Topical emollient therapy with sunflower seed oil alters the skin microbiota of young children with severe acute malnutrition in Bangladesh: A randomised, controlled study. (2021) Fischer, Natalie; Darmstadt, Gary L; Shahunja, KM; Crowther, Jonathan M; Kendall, Lindsay; Gibson, Rachel A; Ahmed, Tahmeed; Relman, David A

Database of epidemic trends and control measures during the first wave of COVID-19 in mainland China. (2021) Fu, Han; Wang, Haowei; Xi, Xiaoyue; Boonyasiri, Adhiratha; Wang, Yuanrong; Hinsley, Wes; Fraser, Keith J; McCabe, Ruth; Olivera Mesa, Daniela; Skarp, Janetta; Ledda, Alice; Dewé, Tamsin; Dighe, Amy; Winskill, Peter; van Elsland, Sabine L; Ainslie, Kylie EC; Baguelin, Marc; Bhatt, Samir; Boyd, Olivia; Brazeau, Nicholas F; Cattarino, Lorenzo; Charles, Giovanni; Coupland, Helen; Cucunuba, Zulma M; Cuomo-Dannenburg, Gina; Donnelly, Christl A; Dorigatti, Ilaria; Eales, Oliver D; FitzJohn, Richard G; Flaxman, Seth; Gaythorpe, Katy AM; Ghani, Azra C; Green, William D; Hamlet, Arran; Hauck, Katharina; Haw, David J; Jeffrey, Benjamin; Laydon, Daniel J; Lees, John A; Mellan, Thomas; Mishra, Swapnil; Nedjati-Gilani, Gemma; Nouvellet, Pierre; Okell, Lucy; Parag, Kris V; Ragonnet-Cronin, Manon; Riley, Steven; Schmit, Nora; Thompson, Hayley A; Unwin, H Juliette T; Verity, Robert; Vollmer, Michaela AC; Volz, Erik; Walker, Patrick GT; Walters, Caroline E; Watson, Oliver J; Whittaker, Charles; Whittles, Lilith K; Imai, Natsuko; Bhatia, Sangeeta; Ferguson, Neil M

In the long shadow of our best intentions: Model-based assessment of the consequences of school reopening during the COVID-19 pandemic. (2021) Johnson, Kaitlyn E; Stoddard, Madison; Nolan, Ryan P; White, Douglas E; Hochberg, Natasha S; Chakravarty, Arijit

Vitamin D Deficiency or Supplementation and the Risk of Human Herpesvirus Infections or Reactivation: A Systematic Review and Meta-analysis. (2021) Lin, Liang-Yu; Bhate, Ketaki; Forbes, Harriet; Smeeth, Liam; Warren-Gash, Charlotte; Langan, Sinéad M

Vaccine Confidence and the Importance of an Interdisciplinary Approach. (2021) Opel, Douglas J; Larson, Heidi J

Conference or Workshop Item

Potential influence of meteorological conditions on early COVID-19 transmission dynamics in 409 cities across 26 countries. (2021) Lowe, Rachel; Armstrong, Ben; Abbott, Sam; Meakin, Sophie; O'Reilly, Kathleen; von Borries, Rosa; Schneider, Rochelle; Royé, Dominic; Hashizume, Masahiro; Pascal, Mathilde; Tobias, Aurelio; Vicedo-Cabrera, Ana; Gasparrini, Antonio; Sera, Francesco

Analysis of the potential drivers of seasonality in COVID-19 transmission dynamics in 409 locations across 26 countries&amp;#160;. (2021) Lowe, Rachel; Armstrong, Ben; Abbott, Sam; Meakin, Sophie; O'Reilly, Kathleen; Von Borries, Rosa; Schneider, Rochelle; Roye, Dominic; Hashizume, Masahiro; Pascal, Mathilde; Tobias, Aurelio; Vicedo-Cabrera, Ana Maria; Gasparrini, Antonio; Sera, Francesco