Baguelin, Marc; Hoek, Albert Jan Van; Jit, Mark; Flasche, Stefan; White, Peter J; Edmunds, W John; (2010) Vaccination against pandemic influenza A/H1N1v in England: a real-time economic evaluation. Vaccine, 28 (12). pp. 2370-2384. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2010.01.002 Full text not available from this repository.

De Waroux, OL; Flasche, S; Prieto-Merino, D; (2016) The Efficacy and Duration of Protection of Pneumococcal Conjugate Vaccines Against Nasopharyngeal Carriage A Meta-regression Model. PEDIATRIC INFECTIOUS DISEASE JOURNAL, 35 (5). p. 591. ISSN 0891-3668 DOI: https://doi.org/10.1097/inf.0000000000001148 Full text not available from this repository.

Abbas, Kaja; Procter, Simon R; Clark, Andrew; Flasche, Stefan; (2021) COVID-19's lost generation of unvaccinated children - Authors' reply. The Lancet. Global health, 9 (3). e251-. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(20)30537-4

Abbas, Kaja; Procter, Simon R; van Zandvoort, Kevin; Clark, Andrew; Funk, Sebastian; Mengistu, Tewodaj; Hogan, Dan; Dansereau, Emily; Jit, Mark; Flasche, Stefan; +1 more... LSHTM CMMID COVID-19 Working Group; (2020) Routine childhood immunisation during the COVID-19 pandemic in Africa: a benefit-risk analysis of health benefits versus excess risk of SARS-CoV-2 infection. The Lancet Global Health, 8 (10). e1264-e1272. DOI: https://doi.org/10.1016/S2214-109X(20)30308-9

Abbott, Sam; Hellewell, Joel; Thompson, Robin N; Sherratt, Katharine; Gibbs, Hamish P; Bosse, Nikos I; Munday, James D; Meakin, Sophie; Doughty, Emma L; Chun, June Young; +11 more... Chan, Yung-Wai Desmond; Finger, Flavio; Campbell, Paul; Endo, Akira; Pearson, Carl AB; Gimma, Amy; Russell, Tim; Flasche, Stefan; Kucharski, Adam J; Eggo, Rosalind M; Funk, Sebastian; (2020) Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts. Wellcome Open Research, 5. p. 112. DOI: https://doi.org/10.12688/wellcomeopenres.16006.1

Abbott, Sam; Hellewell, Joel; Thompson, Robin N; Sherratt, Katharine; Gibbs, Hamish P; Bosse, Nikos I; Munday, James D; Meakin, Sophie; Doughty, Emma L; Chun, June Young; +11 more... Chan, Yung-Wai Desmond; Finger, Flavio; Campbell, Paul; Endo, Akira; Pearson, Carl AB; Gimma, Amy; Russell, Tim; Flasche, Stefan; Kucharski, Adam J; Eggo, Rosalind M; Funk, Sebastian; (2020) Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts. Wellcome Open Research, 5. p. 112. DOI: https://doi.org/10.12688/wellcomeopenres.16006.2

Althouse, Benjamin M; Flasche, Stefan; Minh, Le Nhat; Thiem, Vu Dinh; Hashizume, Masahiro; Ariyoshi, Koya; Anh, Dang Duc; Rodgers, Gail L; Klugman, Keith P; Hu, Hao; +1 more... Yoshida, Lay-Myint; (2018) Seasonality of respiratory viruses causing hospitalizations for acute respiratory infections in children in Nha Trang, Vietnam. International journal of infectious diseases, 75. pp. 18-25. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2018.08.001

Althouse, Benjamin M; Flasche, Stefan; Toizumi, Michiko; Nguyen, Hien-Anh Thi; Vo, Hien Minh; Le, Minh Nhat; Hashizume, Masahiro; Ariyoshi, Koya; Anh, Dang Duc; Rodgers, Gail L; +3 more... Klugman, Keith P; Hu, Hao; Yoshida, Lay-Myint; (2021) Differences in clinical severity of respiratory viral infections in hospitalized children. Scientific reports, 11 (1). 5163-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-021-84423-2

Atkins, Katherine E; Flasche, Stefan; (2018) Vaccination to reduce antimicrobial resistance. The Lancet Global health, 6 (3). e252-. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(18)30043-3

Baguelin, Marc; Camacho, Anton; Flasche, Stefan; Edmunds, W John; (2015) Extending the elderly- and risk-group programme of vaccination against seasonal influenza in England and Wales: a cost-effectiveness study. BMC medicine, 13 (1). 236-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-015-0452-y

Baguelin, Marc; Flasche, Stefan; Camacho, Anton; Demiris, Nikolaos; Miller, Elizabeth; Edmunds, W John; (2013) Assessing optimal target populations for influenza vaccination programmes: an evidence synthesis and modelling study. PLoS medicine, 10 (10). e1001527-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1001527

Camacho, A; Kucharski, A; Aki-Sawyerr, Y; White, MA; Flasche, S; Baguelin, M; Pollington, T; Carney, JR; Glover, R; Smout, E; +3 more... Tiffany, A; Edmunds, WJ; Funk, S; (2015) Temporal changes in ebola transmission in sierra leone and implications for control requirements: A real-time modelling study. PLoS Currents, 7 (OUTBRE). 55052-. DOI: https://doi.org/10.1371/currents.outbreaks.406ae55e83ec0b5193e3085

Camacho, Anton; Kucharski, Adam; Aki-Sawyerr, Yvonne; White, Mark A; Flasche, Stefan; Baguelin, Marc; Pollington, Timothy; Carney, Julia R; Glover, Rebecca; Smout, Elizabeth; +3 more... Tiffany, Amanda; Edmunds, W John; Funk, Sebastian; (2015) Temporal Changes in Ebola Transmission in Sierra Leone and Implications for Control Requirements: a Real-time Modelling Study. PLoS currents, 7. ecurrents.outbreaks.406ae55e83ec0b5193e30856b9235e-. ISSN 2157-3999 DOI: https://doi.org/10.1371/currents.outbreaks.406ae55e83ec0b5193e30856b9235ed2

Chan, DYW; Edmunds, WJ; Chan, HL; Chan, V; Lam, YCK; Thomas, SL; van Hoek, AJ; Flasche, S; (2018) The changing epidemiology of varicella and herpes zoster in Hong Kong before universal varicella vaccination in 2014. Epidemiology and infection, 146 (6). pp. 723-734. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268818000444

Chan, Yung-Wai Desmond; Edmunds, W John; Chan, Hong-Lam; Wong, Miu-Ling; Au, Ka-Wing Albert; Chuang, Shuk-Kwan; van Hoek, Albert Jan; Flasche, Stefan; (2019) Varicella vaccine dose depended effectiveness and waning among preschool children in Hong Kong. Human vaccines & immunotherapeutics, 16 (3). pp. 499-505. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2019.1663121

Chan, Yung-Wai Desmond; Flasche, Stefan; Lam, Tin-Long Terence; Leung, Mei-Hung Joanna; Wong, Miu-Ling; Lam, Ho-Yeung; Chuang, Shuk-Kwan; (2020) Transmission dynamics, serial interval and epidemiology of COVID-19 diseases in Hong Kong under different control measures. Wellcome Open Research, 5. p. 91. DOI: https://doi.org/10.12688/wellcomeopenres.15896.1

Chan, Yung-Wai Desmond; Flasche, Stefan; Lam, Tin-Long Terence; Leung, Mei-Hung Joanna; Wong, Miu-Ling; Lam, Ho-Yeung; Chuang, Shuk-Kwan; (2020) Transmission dynamics, serial interval and epidemiology of COVID-19 diseases in Hong Kong under different control measures. Wellcome Open Research, 5. p. 91. DOI: https://doi.org/10.12688/wellcomeopenres.15896.2

Chen, Cynthia; Cervero Liceras, Francisco; Flasche, Stefan; Sidharta, Sucitro; Yoong, Joanne; Sundaram, Neisha; Jit, Mark; (2019) Effect and cost-effectiveness of pneumococcal conjugate vaccination: a global modelling analysis. LANCET GLOBAL HEALTH, 7 (1). e58-e67. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(18)30422-4

Choi, Yoon Hong; Jit, Mark; Flasche, Stefan; Gay, Nigel; Miller, Elizabeth; (2012) Mathematical modelling long-term effects of replacing Prevnar7 with Prevnar13 on invasive pneumococcal diseases in England and Wales. PloS one, 7 (7). e39927-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0039927

Clark, Andrew; van Zandvoort, Kevin; Flasche, Stefan; Sanderson, Colin; Bines, Julie; Tate, Jacqueline; Parashar, Umesh; Jit, Mark; (2019) Efficacy of live oral rotavirus vaccines by duration of follow-up: a meta-regression of randomised controlled trials. LANCET INFECTIOUS DISEASES, 19 (7). pp. 717-727. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(19)30126-4

Clifford, Samuel; Pearson, Carl AB; Klepac, Petra; Van Zandvoort, Kevin; Quilty, Billy J; CMMID COVID-19 working group; Eggo, Rosalind M; Flasche, Stefan; (2020) Effectiveness of interventions targeting air travellers for delaying local outbreaks of SARS-CoV-2. JOURNAL OF TRAVEL MEDICINE, 27 (5). taaa068-. ISSN 1195-1982 DOI: https://doi.org/10.1093/jtm/taaa068

Clifford, Samuel; Quilty, Billy J; Russell, Timothy W; Liu, Yang; Chan, Yung-Wai D; Pearson, Carl AB; Eggo, Rosalind M; Endo, Akira; CMMID COVID-19 Working Group; Flasche, Stefan; +2 more... Edmunds, W John; Centre for Mathematical Modelling of Infectious Diseases (CMMID); CMMID COVID-19 Working Group, Centre for Mathematical Modelling of Infectious Diseases (CMMID); (2021) Strategies to reduce the risk of SARS-CoV-2 importation from international travellers: modelling estimations for the United Kingdom, July 2020. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 26 (39). ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2021.26.39.2001440

Clifford, Samuel; Waight, Pauline; Hackman, Jada; Hué, Stephane; Gower, Charlotte M; Kirsebom, Freja CM; Skarnes, Catriona; Letley, Louise; Lopez Bernal, Jamie; Andrews, Nick; +2 more... Flasche, Stefan; Miller, Elizabeth; (2023) Effectiveness of BNT162b2 and ChAdOx1 against SARS-CoV-2 household transmission: a prospective cohort study in England. Wellcome Open Research, 8. p. 96. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.17995.1

Dahab, Maysoon; van Zandvoort, Kevin; Flasche, Stefan; Warsame, Abdihamid; Ratnayake, Ruwan; Favas, Caroline; Spiegel, Paul B; Waldman, Ronald J; Checchi, Francesco; (2020) COVID-19 control in low-income settings and displaced populations: what can realistically be done? Conflict and Health, 14 (1). 54-. ISSN 1752-1505 DOI: https://doi.org/10.1186/s13031-020-00296-8

Davies, Nicholas G; Flasche, Stefan; Jit, Mark; Atkins, Katherine E; (2021) Modeling the effect of vaccination on selection for antibiotic resistance in Streptococcus pneumonia e. Science translational medicine, 13 (606). eaaz8690-eaaz8690. ISSN 1946-6234 DOI: https://doi.org/10.1126/scitranslmed.aaz8690

Davies, Nicholas G; Flasche, Stefan; Jit, Mark; Atkins, Katherine E; (2019) Within-host dynamics shape antibiotic resistance in commensal bacteria. Nature ecology & evolution, 3 (3). pp. 440-449. DOI: https://doi.org/10.1038/s41559-018-0786-x

Emery, Jon C; Russell, Timothy W; Liu, Yang; Hellewell, Joel; Pearson, Carl Ab; CMMID COVID-19 Working Group; Knight, Gwenan M; Eggo, Rosalind M; Kucharski, Adam J; Funk, Sebastian; +2 more... Flasche, Stefan; Houben, Rein Mgj; (2020) The contribution of asymptomatic SARS-CoV-2 infections to transmission on the Diamond Princess cruise ship. eLife, 9. e58699-. DOI: https://doi.org/10.7554/eLife.58699

Flasche, S; Slack, M; Miller, E; (2011) Long term trends introduce a potential bias when evaluating the impact of the pneumococcal conjugate vaccination programme in England and Wales. Euro surveillance, 16 (20). 19868-. ISSN 1025-496X https://researchonline.lshtm.ac.uk/id/eprint/1060067

Flasche, Stefan; (2017) The scope for pneumococcal vaccines that do not prevent transmission. Vaccine, 35 (45). pp. 6043-6046. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2017.09.073

Flasche, Stefan; Atkins, Katherine E; (2018) Balancing Benefits and Risks of Antibiotic Use. The Journal of infectious diseases, 218 (9). pp. 1351-1353. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiy344

Flasche, Stefan; Edmunds, W John; Miller, Elizabeth; Goldblatt, David; Robertson, Chris; Choi, Yoon Hong; (2013) The impact of specific and non-specific immunity on the ecology of Streptococcus pneumoniae and the implications for vaccination. Proceedings Biological sciences / The Royal Society, 280 (1771). 20131939-. ISSN 0962-8452 DOI: https://doi.org/10.1098/rspb.2013.1939

Flasche, Stefan; Givon-Lavi, Noga; Dagan, Ron; (2016) Using Pneumococcal Carriage Data to Monitor Postvaccination Changes in the Incidence of Pneumococcal Otitis Media. American journal of epidemiology, 184 (9). pp. 652-659. ISSN 0002-9262 DOI: https://doi.org/10.1093/aje/kww012

Flasche, Stefan; Hens, Niel; Boëlle, Pierre-Yves; Mossong, Joël; van Ballegooijen, W Marijn; Nunes, Baltazar; Rizzo, Caterina; Popovici, Florin; Santa-Olalla, Patricia; Hrubá, Frantiska; +10 more... Parmakova, Kremena; Baguelin, Marc; van Hoek, Albert Jan; Desenclos, Jean-Claude; Bernillon, Pascale; Cámara, Amparro Larrauri; Wallinga, Jacco; Asikainen, Tommi; White, Peter J; Edmunds, W John; (2011) Different transmission patterns in the early stages of the influenza A(H1N1)v pandemic: a comparative analysis of 12 European countries. Epidemics, 3 (2). pp. 125-133. ISSN 1755-4365 DOI: https://doi.org/10.1016/j.epidem.2011.03.005

Flasche, Stefan; Jit, Mark; Rodríguez-Barraquer, Isabel; Coudeville, Laurent; Recker, Mario; Koelle, Katia; Milne, George; Hladish, Thomas J; Perkins, T Alex; Cummings, Derek AT; +11 more... Dorigatti, Ilaria; Laydon, Daniel J; España, Guido; Kelso, Joel; Longini, Ira; Lourenco, Jose; Pearson, Carl AB; Reiner, Robert C; Mier-Y-Terán-Romero, Luis; Vannice, Kirsten; Ferguson, Neil; (2016) The Long-Term Safety, Public Health Impact, and Cost-Effectiveness of Routine Vaccination with a Recombinant, Live-Attenuated Dengue Vaccine (Dengvaxia): A Model Comparison Study. PLoS medicine, 13 (11). e1002181-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1002181

Flasche, Stefan; Le Polain de Waroux, Olivier; O'Brien, Katherine L; Edmunds, W John; (2015) The serotype distribution among healthy carriers before vaccination is essential for predicting the impact of pneumococcal conjugate vaccine on invasive disease. PLoS computational biology, 11 (4). e1004173-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1004173

Flasche, Stefan; Lipsitch, Marc; Ojal, John; Pinsent, Amy; (2020) Estimating the contribution of different age strata to vaccine serotype pneumococcal transmission in the pre vaccine era: a modelling study. BMC medicine, 18 (1). 129-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-020-01601-1

Flasche, Stefan; Ojal, John; Le Polain de Waroux, Olivier; Otiende, Mark; O'Brien, Katherine L; Kiti, Moses; Nokes, D James; Edmunds, W John; Scott, J Anthony G; (2017) Assessing the efficiency of catch-up campaigns for the introduction of pneumococcal conjugate vaccine: a modelling study based on data from PCV10 introduction in Kilifi, Kenya. BMC medicine, 15 (1). 113-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-017-0882-9

Flasche, Stefan; Takahashi, Kensuke; Vu, Dinh Thiem; Suzuki, Motoi; Nguyen, Thi Hien-Anh; Le, HuuTho; Hashizume, Masahiro; Dang, Duc Anh; Edmond, Karen; Ariyoshi, Koya; +3 more... Mulholland, E Kim; Edmunds, W John; Yoshida, Lay-Myint; (2014) Early indication for a reduced burden of radiologically confirmed pneumonia in children following the introduction of routine vaccination against Haemophilus influenzae type b in Nha Trang, Vietnam. Vaccine, 32 (51). pp. 6963-6970. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2014.10.055

Flasche, Stefan; Van Hoek, Albert Jan; Goldblatt, David; Edmunds, W John; O'Brien, Katherine L; Scott, J Anthony G; Miller, Elizabeth; (2015) The Potential for Reducing the Number of Pneumococcal Conjugate Vaccine Doses While Sustaining Herd Immunity in High-Income Countries. PLoS medicine, 12 (6). e1001839-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1001839

Flasche, Stefan; Van Hoek, Albert Jan; Sheasby, Elizabeth; Waight, Pauline; Andrews, Nick; Sheppard, Carmen; George, Robert; Miller, Elizabeth; (2011) Effect of pneumococcal conjugate vaccination on serotype-specific carriage and invasive disease in England: a cross-sectional study. PLoS medicine, 8 (4). e1001017-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1001017

Flasche, Stefan; Wilder-Smith, Annelies; Hombach, Joachim; Smith, Peter G; (2019) Estimating the proportion of vaccine-induced hospitalized dengue cases among Dengvaxia vaccinees in the Philippines. Wellcome open research, 4. 165-. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.15507.1

Flasche, Stefan; Wilder-Smith, Annelies; Hombach, Joachim; Smith, Peter G; (2019) Estimating the proportion of vaccine-induced hospitalized dengue cases among Dengvaxia vaccinees in the Philippines. Wellcome Open Research, 4. p. 165. DOI: https://doi.org/10.12688/wellcomeopenres.15507.1

Ghani, Azra; Baguelin, Marc; Griffin, Jamie; Flasche, Stefan; van Hoek, Albert Jan; Cauchemez, Simon; Donnelly, Christl; Robertson, Chris; White, Michael; Truscott, James; +8 more... Fraser, Christophe; Garske, Tini; White, Peter; Leach, Steve; Hall, Ian; Jenkins, Helen; Ferguson, Neil; Cooper, Ben; (2009) The Early Transmission Dynamics of H1N1pdm Influenza in the United Kingdom. PLoS currents, 1 (JUN). RRN1130-. ISSN 2157-3999 DOI: https://doi.org/10.1371/currents.RRN1130

Hackman, JN; (2023) Application of pathogen genomics to infer the transmission direction of respiratory infection. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671561

Hackman, Jada; Sheppard, Carmen; Phelan, Jody; Jones-Warner, William; Sobkowiak, Ben; Shah, Sonal; Litt, David; Fry, Norman K; Toizumi, Michiko; Yoshida, Lay-Myint; +4 more... Hibberd, Martin; Miller, Elizabeth; Flasche, Stefan; Hué, Stéphane; (2023) Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study. Wellcome open research, 8. 427-. DOI: https://doi.org/10.12688/wellcomeopenres.19219.1

Hodgson, David; Flasche, Stefan; Jit, Mark; Kucharski, Adam J; CMMID COVID-19 Working Group; Centre for Mathematical Modelling of Infectious Disease (CMMID) ; (2021) The potential for vaccination-induced herd immunity against the SARS-CoV-2 B.1.1.7 variant. Eurosurveillance, 26 (20). ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2021.26.20.2100428

Hodgson, David; Koltai, Mihaly; Krauer, Fabienne; Flasche, Stefan; Jit, Mark; Atkins, Katherine E; (2022) Optimal Respiratory Syncytial Virus intervention programmes using Nirsevimab in England and Wales. Vaccine, 40 (49). pp. 7151-7157. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2022.10.041

Hodgson, David; Wilkins, Neil; van Leeuwen, Edwin; Watson, Conall H; Crofts, Jonathan; Flasche, Stefan; Jit, Mark; Atkins, Katherine E; (2024) Protecting infants against RSV disease: an impact and cost-effectiveness comparison of long-acting monoclonal antibodies and maternal vaccination. The Lancet Regional Health Europe, 38. 100829-. ISSN 2666-7762 DOI: https://doi.org/10.1016/j.lanepe.2023.100829

House, Thomas; Baguelin, Marc; van Hoek, Albert Jan; Flasche, Stefan; White, Peter; Sadique, Md Zia; Eames, Ken; Read, Jonathan; Hens, Niel; Melegaro, Alessia; +1 more... Keeling, Matt; (2009) Can reactive school closures help critical care provision during the current influenza pandemic? PLoS currents, 1 (OCT). RRN1119-. ISSN 2157-3999 DOI: https://doi.org/10.1371/currents.rrn1119

Jit, Mark; Flasche, Stefan; (2019) The role of pneumococcal conjugate vaccination in reducing pneumonia mortality. The Lancet Global Health, 7 (2). e173-e174. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(18)30540-0

Jombart, Thibaut; Ghozzi, Stéphane; Schumacher, Dirk; Taylor, Timothy J; Leclerc, Quentin J; Jit, Mark; Flasche, Stefan; Greaves, Felix; Ward, Tom; Eggo, Rosalind M; +7 more... Nightingale, Emily; Meakin, Sophie; Brady, Oliver J; Centre for Mathematical Modelling of Infectious Diseases COVID-1; Medley, Graham F; Höhle, Michael; Edmunds, W John; Centre for Mathematical Modelling; (2021) Real-time monitoring of COVID-19 dynamics using automated trend fitting and anomaly detection. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 376 (1829). 20200266-. ISSN 0962-8436 DOI: https://doi.org/10.1098/rstb.2020.0266

Koltai, Mihaly; Krauer, Fabienne; Hodgson, David; van Leeuwen, Edwin; Treskova-Schwarzbach, Marina; Jit, Mark; Flasche, Stefan; (2022) Determinants of RSV epidemiology following suppression through pandemic contact restrictions. Epidemics, 40. 100614-. ISSN 1755-4365 DOI: https://doi.org/10.1016/j.epidem.2022.100614

Koltai, Mihaly; Moyes, Jocelyn; Nyawanda, Bryan; Nyiro, Joyce; Munywoki, Patrick K; Tempia, Stefano; Li, Xiao; Antillon, Marina; Bilcke, Joke; Flasche, Stefan; +4 more... Beutels, Philippe; Nokes, D James; Cohen, Cheryl; Jit, Mark; (2023) Estimating the cost-effectiveness of maternal vaccination and monoclonal antibodies for respiratory syncytial virus in Kenya and South Africa. BMC medicine, 21 (1). 120-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-023-02806-w

Koltai, Mihaly; Warsame, Abdihamid; Bashiir, Farah; Freemantle, Terri; Reeve, Chris; Williams, Chris; Jit, Mark; Flasche, Stefan; Davies, Nicholas G; Aweis, Ahmed; +3 more... Ahmed, Mohamed; Dalmar, Abdirisak; Checchi, Francesco; (2022) Date of introduction and epidemiologic patterns of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in Mogadishu, Somalia: estimates from transmission modelling of satellite-based excess mortality data in 2020. Wellcome Open Research, 6. p. 255. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.17247.1

Krauer, Fabienne; Guenther, Felix; Treskova-Schwarzbach, Marina; Schoenfeld, Viktoria; Koltai, Mihaly; Jit, Mark; Hodgson, David; Schneider, Udo; Wichmann, Ole; Harder, Thomas; +2 more... Sandmann, Frank G; Flasche, Stefan; (2024) Effectiveness and efficiency of immunisation strategies to prevent RSV among infants and older adults in Germany: a modelling study. BMC medicine, 22 (1). 478-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-024-03687-3

Kucharski, Adam J; Camacho, Anton; Checchi, Francesco; Waldman, Ron; Grais, Rebecca F; Cabrol, Jean-Clement; Briand, Sylvie; Baguelin, Marc; Flasche, Stefan; Funk, Sebastian; +1 more... Edmunds, W John; (2015) Evaluation of the benefits and risks of introducing Ebola community care centers, Sierra Leone. Emerging infectious diseases, 21 (3). pp. 393-399. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2103.141892

Kucharski, Adam J; Camacho, Anton; Flasche, Stefan; Glover, Rebecca E; Edmunds, W John; Funk, Sebastian; (2015) Measuring the impact of Ebola control measures in Sierra Leone. Proceedings of the National Academy of Sciences of the United States of America, 112 (46). pp. 14366-14371. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1508814112

Lamb, Karen E; Flasche, Stefan; Diggle, Mathew; Inverarity, Donald; Greenhalgh, David; Jefferies, Johanna M; Smith, Andrew; Edwards, Giles FS; Denham, Barbara; McMenamin, Jim; +4 more... McDonald, Eisin; Mitchell, Tim J; Clarke, Stuart C; Robertson, Chris; (2013) Trends in serotypes and sequence types among cases of invasive pneumococcal disease in Scotland, 1999-2010. Vaccine, 32 (34). pp. 4356-4363. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2013.05.079

Lambach, Philipp; Silal, Sheetal; Sbarra, Alyssa N; Crowcroft, Natasha S; Frey, Kurt; Ferrari, Matt; Vynnycky, Emilia; Metcalf, C Jessica E; Winter, Amy K; Zimmerman, Laura; +12 more... Koh, Mitsuki; Sheel, Meru; Kim, Sun-Young; Munywoki, Patrick K; Portnoy, Allison; Aggarwal, Rakesh; Farooqui, Habib Hasan; Flasche, Stefan; Hogan, Alexandra B; Leung, Kathy; Moss, William J; Wang, Xuan-Yi; (2024) Report from the World Health Organization's immunization and vaccines-related implementation research advisory committee (IVIR-AC) ad hoc meeting, 28 June - 1 July 2024. Vaccine, 42 (26). p. 126307. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2024.126307

Le Polain De Waroux, O; Flasche, S; Prieto-Merino, D; Goldblatt, D; Edmunds, WJ; (2015) The Efficacy and Duration of Protection of Pneumococcal Conjugate Vaccines Against Nasopharyngeal Carriage: A Meta-Regression Model. The Pediatric infectious disease journal, 34 (8). pp. 858-64. ISSN 0891-3668 DOI: https://doi.org/10.1097/INF.0000000000000717

Le Polain De Waroux, Olivier; Edmunds, W John; Takahashi, Kensuke; Ariyoshi, Koya; Mulholland, E Kim; Goldblatt, David; Choi, Yoon Hong; Anh, Dang Duc; Yoshida, Lay Myint; Flasche, Stefan; (2018) Predicting the impact of pneumococcal conjugate vaccine programme options in Vietnam. Human vaccines & immunotherapeutics, 14 (8). pp. 1939-1947. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2018.1467201

Le Polain de Waroux, Olivier; Flasche, Stefan; Prieto-Merino, David; Edmunds, W John; (2014) Age-dependent prevalence of nasopharyngeal carriage of streptococcus pneumoniae before conjugate vaccine introduction: a prediction model based on a meta-analysis. PloS one, 9 (1). e86136-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0086136

Leng, Trystan; White, Connor; Hilton, Joe; Kucharski, Adam; Pellis, Lorenzo; Stage, Helena; Davies, Nicholas G; Centre for Mathematical Modelling of Infectious Disease 2019 nCo; Keeling, Matt J; Flasche, Stefan; Centre for Mathematical Modelling of Infectious Disease 2019 nCo; (2020) The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study. Wellcome Open Res, 5. 213-. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.16164.2

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Wilder-Smith, Annelies; Flasche, Stefan; Smith, Peter G; (2019) Vaccine-attributable severe dengue in the Philippines. LANCET, 394 (10215). pp. 2151-2152. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(19)32525-5

Zar, Heather J; MacGinty, Rae; Workman, Lesley; Botha, Maresa; Johnson, Marina; Hunt, Adam; Burd, Tiffany; Nicol, Mark P; Flasche, Stefan; Quilty, Billy J; +1 more... Goldblatt, David; (2022) Natural and hybrid immunity following four COVID-19 waves: A prospective cohort study of mothers in South Africa. eClinicalMedicine, 53. 101655-. ISSN 2589-5370 DOI: https://doi.org/10.1016/j.eclinm.2022.101655

Zhang, Juanjuan; Klepac, Petra; Read, Jonathan M; Rosello, Alicia; Wang, Xiling; Lai, Shengjie; Li, Meng; Song, Yujian; Wei, Qingzhen; Jiang, Hao; +5 more... Yang, Juan; Lynn, Henry; Flasche, Stefan; Jit, Mark; Yu, Hongjie; (2019) Patterns of human social contact and contact with animals in Shanghai, China. Scientific reports, 9 (1). 15141-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-019-51609-8

den Boon, Saskia; Jit, Mark; Brisson, Marc; Medley, Graham; Beutels, Philippe; White, Richard; Flasche, Stefan; Hollingsworth, T Déirdre; Garske, Tini; Pitzer, Virginia E; +5 more... Hoogendoorn, Martine; Geffen, Oliver; Clark, Andrew; Kim, Jane; Hutubessy, Raymond; (2019) Guidelines for multi-model comparisons of the impact of infectious disease interventions. BMC medicine, 17 (1). 163-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-019-1403-9

le Polain de Waroux, O; Cohuet, S; Ndazima, D; Kucharski, AJ; Juan-Giner, A; Flasche, S; Tumwesigye, E; Arinaitwe, R; Mwanga-Amumpaire, J; Boum, Y; +4 more... Nackers, F; Checchi, F; Grais, RF; Edmunds, WJ; (2018) Characteristics of human encounters and social mixing patterns relevant to infectious diseases spread by close contact: a survey in Southwest Uganda. BMC infectious diseases, 18 (1). 172-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-018-3073-1

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van Zandvoort, Kevin; Checchi, Francesco; Diggle, Emma; Eggo, Rosalind M; Gadroen, Kartini; Mulholland, Kim; McGowan, Catherine R; le Polain de Waroux, Olivier; Rao, V Bhargavi; Satzke, Catherine; +1 more... Flasche, Stefan; (2019) Pneumococcal conjugate vaccine use during humanitarian crises. Vaccine, 37 (45). pp. 6787-6792. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2019.09.038

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