Year Item Type Full Text

Bibliographic data only

Challenges in predicting the effects of climate change on Schistosoma mansoni and Schistosoma haematobium transmission potential. (2013) McCreesh, Nicky; Booth, Mark

Exploring the potential impact of a reduction in partnership concurrency on HIV incidence in rural Uganda: a modeling study. (2012) McCreesh, Nicky; OʼBrien, Katie; Nsubuga, Rebecca N; Shafer, Leigh Anne; Bakker, Roel; Seeley, Janet; Hayes, Richard J; White, Richard G

Community understanding of Respondent-Driven Sampling in a medical research setting in Uganda: importance for the use of RDS for public health research. (2013) McCreesh, Nicky; Tarsh, Matilda Nadagire; Seeley, Janet; Katongole, Joseph; White, Richard G

Reply. (2012) McCreesh, Nicky; White, Richard G

To what extent does climate explain variations in reported malaria cases in early 20th century Uganda? (2016) Tompkins, Adrian M; Larsen, Laragh; McCreesh, Nicky; Taylor, David

Public

History matching of a complex epidemiological model of human immunodeficiency virus transmission by using variance emulation. (2017) Andrianakis, I; Vernon, I; McCreesh, N; McKinley, TJ; Oakley, JE; Nsubuga, RN; Goldstein, M; White, RG

History matching of a complex epidemiological model of human immunodeficiency virus transmission by using variance emulation. (2016) Andrianakis, I; Vernon, I; McCreesh, N; McKinley, TJ; Oakley, JE; Nsubuga, RN; Goldstein, M; White, RG

Efficient History Matching of a High Dimensional Individual-Based HIV Transmission Model. (2017) Andrianakis, Ioannis; McCreesh, Nicky; Vernon, Ian; McKinley, Trevelyan J; Oakley, Jeremy E; Nsubuga, Rebecca N; Goldstein, Michael; White, Richard G

Bayesian history matching of complex infectious disease models using emulation: a tutorial and a case study on HIV in Uganda. (2015) Andrianakis, Ioannis; Vernon, Ian R; McCreesh, Nicky; McKinley, Trevelyan J; Oakley, Jeremy E; Nsubuga, Rebecca N; Goldstein, Michael; White, Richard G

Direct estimates of absolute ventilation and estimated Mycobacterium tuberculosis transmission risk in clinics in South Africa. (2022) Beckwith, Peter G; Karat, Aaron S; Govender, Indira; Deol, Arminder K; McCreesh, Nicky; Kielmann, Karina; Baisley, Kathy; Grant, Alison D; Yates, Tom A

Cost-effectiveness of tuberculosis infection prevention and control interventions in South African clinics: a model-based economic evaluation informed by complexity science methods. (2023) Bozzani, Fiammetta Maria; McCreesh, Nicky; Diaconu, Karin; Govender, Indira; White, Richard G; Kielmann, Karina; Grant, Alison D; Vassall, Anna

Dynamics of sputum conversion during effective tuberculosis treatment: A systematic review and meta-analysis. (2021) Calderwood, Claire J; Wilson, James P; Fielding, Katherine L; Harris, Rebecca C; Karat, Aaron S; Mansukhani, Raoul; Falconer, Jane; Bergstrom, Malin; Johnson, Sarah M; McCreesh, Nicky; Monk, Edward JM; Odayar, Jasantha; Scott, Peter J; Stokes, Sarah A; Theodorou, Hannah; Moore, David AJ

Importance of ventilation and occupancy to Mycobacterium tuberculosis transmission rates in congregate settings. (2022) Deol, AK; Shaikh, N; Middelkoop, K; Mohlamonyane, M; White, RG; McCreesh, N

Estimating ventilation rates in rooms with varying occupancy levels: Relevance for reducing transmission risk of airborne pathogens. (2021) Deol, Arminder K; Scarponi, Danny; Beckwith, Peter; Yates, Tom A; Karat, Aaron S; Yan, Ada WC; Baisley, Kathy S; Grant, Alison D; White, Richard G; McCreesh, Nicky

Qualitative system dynamics modelling to support the design and implementation of tuberculosis infection prevention and control measures in South African primary healthcare facilities. (2024) Diaconu, Karin; Karat, Aaron; Bozzani, Fiammetta; McCreesh, Nicky; Falconer, Jennifer; Voce, Anna; Vassall, Anna; Grant, Alison D; Kielmann, Karina

A competency framework on simulation modelling-supported decision-making for Master of Public Health graduates. (2023) Hrzic, Rok; Cade, Maria Vitoria; Wong, Brian Li Han; McCreesh, Nicky; Simon, Judit; Czabanowska, Katarzyna

Waiting times, patient flow, and occupancy density in South African primary health care clinics: implications for infection prevention and control. (2021) Karat, Aaron S; McCreesh, Nicky; Baisley, Kathy; Govender, Indira; Kallon, Idriss I; Kielmann, Karina; MacGregor, Hayley; Vassall, Anna; Yates, Tom A; Grant, Alison D

Estimating waiting times, patient flow, and waiting room occupancy density as part of tuberculosis infection prevention and control research in South African primary health care clinics. (2022) Karat, Aaron S; McCreesh, Nicky; Baisley, Kathy; Govender, Indira; Kallon, Idriss I; Kielmann, Karina; MacGregor, Hayley; Vassall, Anna; Yates, Tom A; Grant, Alison D

Tuberculosis infection prevention and control: why we need a whole systems approach. (2020) Kielmann, Karina; Karat, Aaron S; Zwama, Gimenne; Colvin, Christopher; Swartz, Alison; Voce, Anna S; Yates, Tom A; MacGregor, Hayley; McCreesh, Nicky; Kallon, Idriss; Vassall, Anna; Govender, Indira; Seeley, Janet; Grant, Alison D

Coverage of clinic-based TB screening in South Africa may be low in key risk groups. (2015) McCreesh, N; Faghmous, I; Looker, C; Dodd, PJ; Plumb, ID; Shanaube, K; Muyoyeta, M; Godfrey-Faussett, P; Ayles, H; White, RG

Tuberculosis from transmission in clinics in high HIV settings may be far higher than contact data suggest. (2019) McCreesh, N; Grant, AD; Yates, TA; Karat, AS; White, RG

Universal test, treat, and keep: improving ART retention is key in cost-effective HIV control in Uganda. (2017) McCreesh, Nicky; Andrianakis, Ioannis; Nsubuga, Rebecca N; Strong, Mark; Vernon, Ian; McKinley, Trevelyan J; Oakley, Jeremy E; Goldstein, Michael; Hayes, Richard; White, Richard G

Improving ART programme retention and viral suppression are key to maximising impact of treatment as prevention - a modelling study. (2017) McCreesh, Nicky; Andrianakis, Ioannis; Nsubuga, Rebecca N; Strong, Mark; Vernon, Ian; McKinley, Trevelyan J; Oakley, Jeremy E; Goldstein, Michael; Hayes, Richard; White, Richard G

Choice of time horizon critical in estimating costs and effects of changes to HIV programmes. (2018) McCreesh, Nicky; Andrianakis, Ioannis; Nsubuga, Rebecca N; Strong, Mark; Vernon, Ian; McKinley, Trevelyan J; Oakley, Jeremy E; Goldstein, Michael; Hayes, Richard; White, Richard G

Effect of water temperature and population density on the population dynamics of Schistosoma mansoni intermediate host snails. (2014) McCreesh, Nicky; Arinaitwe, Moses; Arineitwe, Wilber; Tukahebwa, Edridah M; Booth, Mark

The effect of simulating different intermediate host snail species on the link between water temperature and schistosomiasis risk. (2014) McCreesh, Nicky; Booth, Mark

The effect of increasing water temperatures on Schistosoma mansoni transmission and Biomphalaria pfeifferi population dynamics: an agent-based modelling study. (2014) McCreesh, Nicky; Booth, Mark

Respondent driven sampling: determinants of recruitment and a method to improve point estimation. (2013) McCreesh, Nicky; Copas, Andrew; Seeley, Janet; Johnston, Lisa G; Sonnenberg, Pam; Hayes, Richard J; Frost, Simon DW; White, Richard G

Impact of the Covid-19 epidemic and related social distancing regulations on social contact and SARS-CoV-2 transmission potential in rural South Africa: analysis of repeated cross-sectional surveys. (2021) McCreesh, Nicky; Dlamini, Vuyiswa; Edwards, Anita; Olivier, Stephen; Dayi, Njabulo; Dikgale, Keabetswe; Nxumalo, Siyabonga; Dreyer, Jaco; Baisley, Kathy; Siedner, Mark J; White, Richard G; Herbst, Kobus; Grant, Alison D; Harling, Guy

Impact of social distancing regulations and epidemic risk perception on social contact and SARS-CoV-2 transmission potential in rural South Africa: analysis of repeated cross-sectional surveys. (2020) McCreesh, Nicky; Dlamini, Vuyiswa; Edwards, Anita; Olivier, Stephen; Dayi, Njabulo; Dikgale, Keabetswe; Nxumalo, Siyabonga; Dreyer, Jaco; Baisley, Kathy; Siedner, Mark J; White, Richard G; Herbst, Kobus; Grant, Alison D; Harling, Guy

Evaluation of respondent-driven sampling. (2012) McCreesh, Nicky; Frost, Simon DW; Seeley, Janet; Katongole, Joseph; Tarsh, Matilda N; Ndunguse, Richard; Jichi, Fatima; Lunel, Natasha L; Maher, Dermot; Johnston, Lisa G; Sonnenberg, Pam; Copas, Andrew J; Hayes, Richard J; White, Richard G

Evaluation of the role of location and distance in recruitment in respondent-driven sampling. (2011) McCreesh, Nicky; Johnston, Lisa G; Copas, Andrew; Sonnenberg, Pam; Seeley, Janet; Hayes, Richard J; Frost, Simon DW; White, Richard G

Modelling the effect of infection prevention and control measures on rate of Mycobacterium tuberculosis transmission to clinic attendees in primary health clinics in South Africa. (2021) McCreesh, Nicky; Karat, Aaron S; Baisley, Kathy; Diaconu, Karin; Bozzani, Fiammetta; Govender, Indira; Beckwith, Peter; Yates, Tom A; Deol, Arminder K; Houben, Rein MGJ; Kielmann, Karina; White, Richard G; Grant, Alison D

Estimating the contribution of transmission in primary healthcare clinics to community-wide TB disease incidence, and the impact of infection prevention and control interventions, in KwaZulu-Natal, South Africa. (2022) McCreesh, Nicky; Karat, Aaron S; Govender, Indira; Baisley, Kathy; Diaconu, Karin; Yates, Tom A; Houben, Rein Mgj; Kielmann, Karina; Grant, Alison D; White, Richard

Comparison of indoor contact time data in Zambia and Western Cape, South Africa suggests targeting of interventions to reduce Mycobacterium tuberculosis transmission should be informed by local data. (2016) McCreesh, Nicky; Looker, Clare; Dodd, Peter J; Plumb, Ian D; Shanaube, Kwame; Muyoyeta, Monde; Godfrey-Faussett, Peter; Corbett, Elizabeth L; Ayles, Helen; White, Richard G

Improving Estimates of Social Contact Patterns for Airborne Transmission of Respiratory Pathogens. (2022) McCreesh, Nicky; Mohlamonyane, Mbali; Edwards, Anita; Olivier, Stephen; Dikgale, Keabetswe; Dayi, Njabulo; Gareta, Dickman; Wood, Robin; Grant, Alison D; White, Richard G; Middelkoop, Keren

Estimating age-mixing patterns relevant for the transmission of airborne infections. (2019) McCreesh, Nicky; Morrow, Carl; Middelkoop, Keren; Wood, Robin; White, Richard G

Predicting the effects of climate change on Schistosoma mansoni transmission in eastern Africa. (2015) McCreesh, Nicky; Nikulin, Grigory; Booth, Mark

An explanation for the low proportion of tuberculosis that results from transmission between household and known social contacts. (2018) McCreesh, Nicky; White, Richard G

Approximate Bayesian Computation and Simulation-Based Inference for Complex Stochastic Epidemic Models. (2017) McKinley, Trevelyan J; Vernon, Ian; Andrianakis, Ioannis; McCreesh, Nicky; Oakley, Jeremy E; Nsubuga, Rebecca N; Goldstein, Michael; White, Richard G

The potential impact of COVID-19-related disruption on tuberculosis burden. (2020) McQuaid, C Finn; McCreesh, Nicky; Read, Jonathan M; Sumner, Tom; CMMID COVID-19 Working Group; Houben, Rein MGJ; White, Richard G; Harris, Rebecca C

The potential impact of COVID-19-related disruption on tuberculosis burden. (2020) McQuaid, C Finn; McCreesh, Nicola; Read, Jonathan M; Sumner, Tom; CMMID COVID-19 Working Group; Houben, Rein; White, Richard G; Harris, Rebecca

The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements. (2020) Quaife, Matthew; van Zandvoort, Kevin; Gimma, Amy; Shah, Kashvi; McCreesh, Nicky; Prem, Kiesha; Barasa, Edwine; Mwanga, Daniel; Kangwana, Beth; Pinchoff, Jessie; CMMID COVID-19 Working Group; Edmunds, W John; Jarvis, Christopher I; Austrian, Karen

The impact of COVID-19 control measures on social contacts and transmission in Kenyan informal settlements. (2020) Quaife, Matthew; van Zandvoort, Kevin; Gimma, Amy; Shah, Kashvi; McCreesh, Nicky; Prem, Kiesha; Barasa, Edwine; Mwanga, Daniel; Kangwana, Beth; Pinchoff, Jessie; Edmunds, W John; Jarvis, Christopher I; Austrian, Karen

Rediscovering the natural history of tuberculosis using modelling to combine historical and contemporary data. (2023) Richards, AS

Quantifying progression and regression across the spectrum of pulmonary tuberculosis: a data synthesis study. (2023) Richards, Alexandra S; Sossen, Bianca; Emery, Jon C; Horton, Katherine C; Heinsohn, Torben; Frascella, Beatrice; Balzarini, Federica; Oradini-Alacreu, Aurea; Häcker, Brit; Odone, Anna; McCreesh, Nicky; Grant, Alison D; Kranzer, Katharina; Cobelens, Frank; Esmail, Hanif; Houben, Rein MGJ

Is neglect of self-clearance biasing TB vaccine impact estimates? (2023) Scarponi, Danny; Clark, Rebecca A; Weerasuriya, Chathika Krishan; Emery, Jon; Houben, Rein MGJ; White, Richard; McCreesh, Nicky

Demonstrating multi-country calibration of a tuberculosis model using new history matching and emulation package - hmer. (2023) Scarponi, Danny; Iskauskas, Andrew; Clark, Rebecca A; Vernon, Ian; McKinley, Trevelyan J; Goldstein, Michael; Mukandavire, Christinah; Deol, Arminder; Weerasuriya, Chathika; Bakker, Roel; White, Richard G; McCreesh, Nicky

Combining process-based and correlative models improves predictions of climate change effects on Schistosoma mansoni transmission in eastern Africa. (2016) Stensgaard, Anna-Sofie; Booth, Mark; Nikulin, Grigory; McCreesh, Nicky

Migration statistics relevant for malaria transmission in Senegal derived from mobile phone data and used in an agent-based migration model. (2016) Tompkins, Adrian M; McCreesh, Nicky

Time to change the way we think about tuberculosis infection prevention and control in health facilities: insights from recent research. (2023) Yates, Tom A; Karat, Aaron S; Bozzani, Fiammetta; McCreesh, Nicky; MacGregor, Hayley; Beckwith, Peter G; Govender, Indira; Colvin, Christopher J; Kielmann, Karina; Grant, Alison D

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Africa Health Research Institute (AHRI) Household Contact study: a study protocol, statistical analysis and modelling plan. (2024) Khan, Palwasha Y; Govender, Indira; McCreesh, Nicky; Sweeney, Sedona; Sithole, Mareca; Ording-Jespersen, Greg; Buthelezi, Xoli; Houben, Rein MGJ; Baisley, Kathy; Smit, Theresa; Wong, Emily B; Hanekom, Willem; White, Richard G; Vassall, Anna; Fielding, Katherine; Grant, Alison D picture_as_pdf