Ackers, JP; (2016) Book review: Amebiasis. Biology and Pathogenesis of Entamoeba. Frontiers in microbiology, 7. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2016.00819

Al-Khattaf, FS; Tremp, AZ; El-Houderi, A; Dessens, JT; (2016) The Plasmodium alveolin IMC1a is stabilised by its terminal cysteine motifs and facilitates sporozoite morphogenesis and infectivity in a dose-dependent manner. Molecular and biochemical parasitology, 211. pp. 48-56. ISSN 0166-6851 DOI: https://doi.org/10.1016/j.molbiopara.2016.09.004

Al-khattaf, F; (2016) Functional characterization of the alveolins, a family of cytoskeleton proteins of malaria parasites. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02837742

Ale, A; Crepin, VF; Collins, JW; Constantinou, N; Habibzay, M; Babtie, AC; Frankel, G; Stumpf, MP; (2016) Model of Host-Pathogen Interaction Dynamics Links In Vivo Optical Imaging and Immune Responses. Infection and immunity, 85 (1). ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00606-16

Alenizi, D; Ringwood, T; Redhwan, A; Bouraha, B; Wren, BW; Prentice, M; McNally, A; (2016) All Yersinia enterocolitica are pathogenic: Virulence of phylogroup 1 Y. enterocolitica in a Galleria mellonella infection model. Microbiology, 162 (8). pp. 1379-87. ISSN 1350-0872 DOI: https://doi.org/10.1099/mic.0.000311 Full text not available from this repository.

Allen, DJ; Trainor, E; Callaghan, A; O'Brien, SJ; Cunliffe, NA; Iturriza-Gómara, M; (2016) Early Detection of Epidemic GII-4 Norovirus Strains in UK and Malawi: Role of Surveillance of Sporadic Acute Gastroenteritis in Anticipating Global Epidemics. PloS one, 11 (4). e0146972. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0146972

Alshaikhahmed, K; Roy, P; (2016) Generation of virus-like particles for emerging epizootic haemorrhagic disease virus: Towards the development of safe vaccine candidates. Vaccine, 34 (8). pp. 1103-8. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2015.12.069 Full text not available from this repository.

Amambua-Ngwa, A; Danso, B; Worwui, A; Ceesay, S; Davies, N; Jeffries, D; D'Alessandro, U; Conway, D; (2016) Exceptionally long-range haplotypes in Plasmodium falciparum chromosome 6 maintained in an endemic African population. Malaria journal, 15 (1). p. 515. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1560-7

Amato, R; Miotto, O; Woodrow, CJ; Almagro-Garcia, J; Sinha, I; Campino, S; Mead, D; Drury, E; Kekre, M; Sanders, M; +55 more... Amambua-Ngwa, A; Amaratunga, C; Amenga-Etego, L; Andrianaranjaka, V; Apinjoh, T; Ashley, E; Auburn, S; Awandare, GA; Baraka, V; Barry, A; Boni, MF; Borrmann, S; Bousema, T; Branch, O; Bull, PC; Chotivanich, K; Conway, DJ; Craig, A; Day, NP; Djimde, A; Dolecek, C; Dondorp, AM; Drakeley, C; Duffy, P; Echeverry, DF; Egwang, TG; Fairhurst, RM; Faiz, MA; Fanello, CI; Tran Tinh, H; Hodgson, A; Imwong, M; Ishengoma, D; Lim, P; Lon, C; Marfurt, J; Marsh, K; Mayxay, M; Michon, P; Mobegi, V; Mokuolu, OA; Montgomery, J; Mueller, I; Kyaw, MP; Newton, PN; Nosten, F; Noviyanti, R; Nzila, A; Ocholla, H; Oduro, A; Onyamboko, M; Ouedraogo, J.-, B; Phyo, APP; Plowe, C; Price, RN; (2016) Genomic epidemiology of artemisinin resistant malaria. eLife, 5. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.08714

Andersson, P; Harris, SR; Smith, HM; Hadfield, J; O'Neill, C; Cutcliffe, LT; Douglas, FP; Asche, LV; Mathews, JD; Hutton, SI; +5 more... Sarovich, DS; Tong, SY; Clarke, IN; Thomson, NR; Giffard, PM; (2016) Chlamydia trachomatis from Australian Aboriginal people with trachoma are polyphyletic composed of multiple distinctive lineages. Nature communications, 7. p. 10688. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms10688

Ansari, HR; Templeton, TJ; Subudhi, AK; Ramaprasad, A; Tang, J; Lu, F; Naeem, R; Hashish, Y; Oguike, MC; Benavente, ED; +6 more... Clark, TG; Sutherland, CJ; Barnwell, JW; Culleton, R; Cao, J; Pain, A; (2016) Genome-scale comparison of expanded gene families in Plasmodium ovale wallikeri and Plasmodium ovale curtisi with Plasmodium malariae and with other Plasmodium species. International journal for parasitology. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2016.05.009

Arjyal, A; Basnyat, B; Nhan, HT; Koirala, S; Giri, A; Joshi, N; Shakya, M; Pathak, KR; Mahat, SP; Prajapati, SP; +18 more... Adhikari, N; Thapa, R; Merson, L; Gajurel, D; Lamsal, K; Lamsal, D; Yadav, BK; Shah, G; Shrestha, P; Dongol, S; Karkey, A; Thompson, CN; Thieu, NT; Thanh, DP; Baker, S; Thwaites, GE; Wolbers, M; Dolecek, C; (2016) Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial. The Lancet infectious diseases. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(15)00530-7

Atas, A; Seddon, AM; Ford, DC; Cooper, IA; Wren, BW; Oyston, PC; Karlyshev, AV; (2016) YPTB3816 of Yersinia pseudotuberculosis strain IP32953 is a virulence-related metallo-oligopeptidase. BMC microbiology, 16 (1). p. 282. ISSN 1471-2180 DOI: https://doi.org/10.1186/s12866-016-0900-7

Aung, HL; Tun, T; Moradigaravand, D; Köser, CU; Nyunt, WW; Aung, ST; Lwin, T; Thinn, KK; Crump, JA; Parkhill, J; +3 more... Peacock, SJ; Cook, GM; Hill, PC; (2016) Whole-genome sequencing of multidrug-resistant Mycobacterium tuberculosis isolates from Myanmar. Journal of global antimicrobial resistance, 6. pp. 113-117. ISSN 2213-7165 DOI: https://doi.org/10.1016/j.jgar.2016.04.008

Ba, H; Ahouidi, AD; Duffy, CW; Deh, YB; Diedhiou, C; Tandia, A; Diallo, MY; Assefa, S; Lô, BB; Elkory, MB; +1 more... Conway, DJ; (2016) [Evaluation of malaria Rapid Diagnostic Test Optimal-IT® pLDH along the Plasmodium falciparum distribution limit in Mauritania]. Bulletin de la Societe de pathologie exotique (1990), 110 (1). pp. 31-37. ISSN 0037-9085 DOI: https://doi.org/10.1007/s13149-017-0541-y

Ba, H; Duffy, CW; Ahouidi, AD; Deh, YB; Diallo, MY; Tandia, A; Conway, DJ; (2016) Widespread distribution of Plasmodium vivax malaria in Mauritania on the interface of the Maghreb and West Africa. Malaria journal, 15 (1). p. 80. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1118-8

Baker, Kate S; Dallman, Timothy J; Behar, Adi; Weill, Francois-Xavier; Gouali, Malika; Sobel, Jeremy; Fookes, Maria; Valinsky, Lea; Gal-Mor, Ohad; Connor, Thomas R; +6 more... Nissan, Israel; Bertrand, Sophie; Parkhill, Julian; Jenkins, Claire; Cohen, Dani; Thomson, Nicholas R; (2016) Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities. EMERGING INFECTIOUS DISEASES, 22 (9). pp. 1545-1553. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2209.151953

Baker, S; Hombach, J; Marks, F; (2016) What Have We Learned From the Typhoid Fever Surveillance in Africa Program? Clinical infectious diseases, 62 Sup. S1-3. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ675

Bossé, JT; Chaudhuri, RR; Li, Y; Leanse, LG; Fernandez Crespo, R; Coupland, P; Holden, MT; Bazzolli, DM; Maskell, DJ; Tucker, AW; +3 more... Wren, BW; Rycroft, AN; Langford, PR; (2016) Complete Genome Sequence of MIDG2331, a Genetically Tractable Serovar 8 Clinical Isolate of Actinobacillus pleuropneumoniae. Genome announcements, 4 (1). ISSN 2169-8287 DOI: https://doi.org/10.1128/genomeA.01667-15

Bossé, JT; Li, Y; Fernandez Crespo, R; Chaudhuri, RR; Rogers, J; Holden, MT; Maskell, DJ; Tucker, AW; Wren, BW; Rycroft, AN; +2 more... Langford, PR; Consortium, TB; (2016) ICEApl1, an Integrative Conjugative Element Related to ICEHin1056, Identified in the Pig Pathogen Actinobacillus pleuropneumoniae. Frontiers in microbiology, 7. p. 810. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2016.00810

Bouché, L; Panico, M; Hitchen, P; Binet, D; Sastre, F; Faulds-Pain, A; Valiente, E; Vinogradov, E; Aubry, A; Fulton, K; +5 more... Twine, S; Logan, SM; Wren, BW; Dell, A; Morris, HR; (2016) The Type B Flagellin of Hypervirulent Clostridium difficile is Modified with Novel Sulphonated Peptidylamido-Glycans. The Journal of biological chemistry, 291 (49). pp. 25439-25449. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M116.749481

Brodrick, HJ; Raven, KE; Harrison, EM; Blane, B; Reuter, S; Török, ME; Parkhill, J; Peacock, SJ; (2016) Whole-genome sequencing reveals transmission of vancomycin-resistant Enterococcus faecium in a healthcare network. Genome medicine, 8 (1). p. 4. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-015-0259-7

Busby, GB; Band, G; Si Le, Q; Jallow, M; Bougama, E; Mangano, VD; Amenga-Etego, LN; Enimil, A; Apinjoh, T; Ndila, CM; +281 more... Manjurano, A; Nyirongo, V; Doumba, O; Rockett, KA; Kwiatkowski, DP; Spencer, CC; Malaria Genomic Epidemiology Network; , COLLABORATORS; Vanderwal, A; Elzein, A; Nyika, A; Mendy, A; Miles, A; Diss, A; Kerasidou, A; Green, A; Jeffreys, AE; MacInnis, B; Hughes, C; Moyes, C; Spencer, CC; Hubbart, C; Malangone, C; Potter, C; Mead, D; Barnwell, D; Kwiatkowski, DP; Jyothi, D; Drury, E; Somaskantharajah, E; Hilton, E; Leffler, E; Maslen, G; Band, G; Busby, G; Clarke, GM; Ragoussis, I; Garcia, JA; Rogers, J; deVries, J; Shelton, J; Ragoussis, J; Stalker, J; Rodford, J; O'Brien, J; Evans, J; Rowlands, K; Cook, K; Fitzpatrick, K; Kivinen, K; Small, K; Johnson, KJ; Rockett, KA; Hart, L; Manske, M; McCreight, M; Stevens, M; Pirinen, M; Hennsman, M; Parker, M; SanJoaquin, M; Seplúveda, N; Cook, O; Miotto, O; Deloukas, P; Craik, R; Wrigley, R; Watson, R; Pearson, R; Hutton, R; Oyola, S; Auburn, S; Shah, S; Le, SQ; Molloy, S; Bull, S; Campino, S; Clark, TG; Ruano-Rubio, V; Cornelius, V; Teo, YY; Corran, P; Silva, ND; Risley, P; Doyle, A; Evans, J; Horstmann, R; Plowe, C; Duffy, P; Carucci, D; Gottleib, M; Tall, A; Ly, AB; Dolo, A; Sakuntabhai, A; Puijalon, O; Bah, A; Camara, A; Sadiq, A; Khan, AA; Jobarteh, A; Mendy, A; Ebonyi, A; Danso, B; Taal, B; Casals-Pascual, C; Conway, DJ; Onykwelu, E; Sisay-Joof, F; Sirugo, G; Kanyi, H; Njie, H; Obu, H; Saine, H; Sambou, I; Abubakar, I; Njie, J; Fullah, J; Jaiteh, J; Bojang, KA; Jammeh, K; Sabally-Ceesay, K; Manneh, L; Camara, L; Yamoah, L; Njie, M; Njie, M; Pinder, M; Jallow, M; Aiyegbo, M; Jasseh, M; Keita, ML; Saidy-Khan, M; Jallow, M; Ceesay, N; Rasheed, O; Ceesay, PL; Esangbedo, P; Cole-Ceesay, R; Olaosebikan, R; Correa, S; Njie, S; Usen, S; Dibba, Y; Barry, A; Djimdé, A; Sall, AH; Abathina, A; Niangaly, A; Dembele, A; Poudiougou, B; Diarra, E; Bamba, K; Thera, MA; Doumbo, O; Toure, O; Konate, S; Sissoko, S; Diakite, M; Konate, AT; Modiano, D; Bougouma, EC; Bancone, G; Ouedraogo, IN; Simpore, J; Sirima, SB; Mangano, VD; Troye-Blomberg, M; Oduro, AR; Hodgson, AV; Ghansah, A; Nkrumah, F; Atuguba, F; Koram, KA; Amenga-Etego, LN; Wilson, MD; Ansah, NA; Mensah, N; Ansah, PA; Anyorigiya, T; Asoala, V; Rogers, WO; Akoto, AO; Ofori, AO; Enimil, A; Ansong, D; Sambian, D; Asafo-Agyei, E; Sylverken, J; Antwi, S; Agbenyega, T; Orimadegun, AE; Amodu, FA; Oni, O; Omotade, OO; Amodu, O; Olaniyan, S; Ndi, A; Yafi, C; Achidi, EA; Mbunwe, E; Anchang-Kimbi, J; Mugri, R; Besingi, R; Apinjoh, TO; Titanji, V; Elhassan, A; Hussein, A; Mohamed, H; Elhassan, I; Ibrahim, M; Kokwaro, G; Oluoch, T; Macharia, A; Ndila, CM; Newton, C; Opi, DH; Kamuya, D; Bauni, E; Marsh, K; Peshu, N; Molyneux, S; Uyoga, S; Williams, TN; Marsh, V; Manjurano, A; Nadjm, B; Maxwell, C; Drakeley, C; Riley, E; Mtei, F; Mtove, G; Wangai, H; Reyburn, H; Joseph, S; Ishengoma, D; Lemnge, M; Mutabingwa, T; Makani, J; Cox, S; Phiri, A; Munthali, A; Kachala, D; Njiragoma, L; Molyneux, ME; Moore, M; Ntunthama, N; Pensulo, P; Taylor, T; Nyirongo, V; Carter, R; Fernando, D; Karunaweera, N; Dewasurendra, R; Suriyaphol, P; Singhasivanon, P; Simmons, CP; Thai, CQ; Sinh, DX; Farrar, J; Chuong, LV; Phu, NH; Hieu, NT; Hoang Mai, NT; Ngoc Quyen, NT; Day, N; Dunstan, SJ; O'Riordan, SE; Hong Chau, TT; Hien, TT; Allen, A; Lin, E; Karunajeewa, H; Mueller, I; Reeder, J; Manning, L; Laman, M; Michon, P; Siba, P; Allen, S; Davis, TM; (2016) Admixture into and within sub-Saharan Africa. eLife, 5. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.15266

Cairns, MD; Preston, MD; Hall, CL; Gerding, DN; Hawkey, PM; Kato, H; Kim, H; Kuijper, EJ; Lawley, TD; Pituch, H; +8 more... Reid, S; Kullin, B; Riley, TV; Solomon, K; Tsai, PJ; Weese, JS; Stabler, RA; Wren, BW; (2016) Comparative genome analysis and global phylogeny of the toxin variant Clostridium difficile PCR Ribotype 017 reveals the evolution of two independent sub-lineages. Journal of clinical microbiology. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01296-16

Cameron, MM; Acosta-Serrano, A; Bern, C; Boelaert, M; den Boer, M; Burza, S; Chapman, LA; Chaskopoulou, A; Coleman, M; Courtenay, O; +21 more... Croft, S; Das, P; Dilger, E; Foster, G; Garlapati, R; Haines, L; Harris, A; Hemingway, J; Hollingsworth, TD; Jervis, S; Medley, G; Miles, M; Paine, M; Picado, A; Poché, R; Ready, P; Rogers, M; Rowland, M; Sundar, S; de Vlas, SJ; Weetman, D; (2016) Understanding the transmission dynamics of Leishmania donovani to provide robust evidence for interventions to eliminate visceral leishmaniasis in Bihar, India. Parasites & vectors, 9 (1). p. 25. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-016-1309-8

Campino, S; Benavente, ED; Assefa, S; Thompson, E; Drought, LG; Taylor, CJ; Gorvett, Z; Carret, CK; Flueck, C; Ivens, AC; +4 more... Kwiatkowski, DP; Alano, P; Baker, DA; Clark, TG; (2016) Genomic variation in two gametocyte non-producing Plasmodium falciparum clonal lines. Malaria journal, 15 (1). p. 229. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1254-1

Carmona-Vicente, N; Allen, DJ; Rodríguez-Díaz, J; Iturriza-Gómara, M; Buesa, J; (2016) Antibodies against Lewis antigens inhibit the binding of human norovirus GII.4 virus-like particles to saliva but not to intestinal Caco-2 cells. Virology journal, 13. p. 82. ISSN 1743-422X DOI: https://doi.org/10.1186/s12985-016-0538-y

Carmona-Vicente, N; Vila-Vicent, S; Allen, D; Gozalbo-Rovira, R; Iturriza-Gómara, M; Buesa, J; Rodríguez-Díaz, J; (2016) Characterization of a Novel Conformational GII.4 Norovirus Epitope: Implications for Norovirus-Host Interactions. Journal of virology, 90 (17). pp. 7703-14. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.01023-16 Full text not available from this repository.

Celma, CC; Stewart, M; Wernike, K; Eschbaumer, M; Gonzalez-Molleda, L; Breard, E; Schulz, C; Hoffmann, B; Haegeman, A; De Clercq, K; +4 more... Zientara, S; van Rijn, PA; Beer, M; Roy, P; (2016) Replication-deficient particles: New insights into the next generation of bluetongue virus vaccines. Journal of virology, 91 (1). ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.01892-16

Chaguza, C; Cornick, JE; Harris, SR; Andam, CP; Bricio-Moreno, L; Yang, M; Yalcin, F; Ousmane, S; Govindpersad, S; Senghore, M; +20 more... Ebruke, C; Du Plessis, M; Kiran, AM; Pluschke, G; Sigauque, B; McGee, L; Klugman, KP; Turner, P; Corander, J; Parkhill, J; Collard, JM; Antonio, M; von Gottberg, A; Heyderman, RS; French, N; Kadioglu, A; Hanage, WP; Everett, DB; Bentley, SD; PAGe Consortium; (2016) Understanding pneumococcal serotype 1 biology through population genomic analysis. BMC infectious diseases, 16 (1). p. 649. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-016-1987-z

Champion, OL; Gourlay, LJ; Scott, AE; Lassaux, P; Conejero, L; Perletti, L; Hemsley, C; Prior, J; Bancroft, G; Bolognesi, M; +1 more... Titball, RW; (2016) Immunisation with proteins expressed during chronic murine melioidosis provides enhanced protection against disease. Vaccine. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2016.02.038 Full text not available from this repository.

Chang, DC; Hoang, LT; Mohamed Naim, AN; Dong, H; Schreiber, MJ; Hibberd, ML; Tan, MJ; Shi, PY; (2016) Evasion of early innate immune response by 2'-O-methylation of dengue genomic RNA. Virology, 499. pp. 259-266. ISSN 0042-6822 DOI: https://doi.org/10.1016/j.virol.2016.09.022 Full text not available from this repository.

Chantratita, N; Tandhavanant, S; Seal, S; Wikraiphat, C; Wongsuvan, G; Ariyaprasert, P; Suntornsut, P; Teerawattanasook, N; Jutrakul, Y; Srisurat, N; +11 more... Chaimanee, P; Mahavanakul, W; Srisamang, P; Phiphitaporn, S; Mokchai, M; Anukunananchai, J; Wongratanacheewin, S; Chetchotisakd, P; Emond, MJ; Peacock, SJ; West, TE; (2016) TLR4 genetic variation is associated with inflammatory responses in Gram-positive sepsis. Clinical microbiology and infection. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2016.08.028

Chantratita, N; Wikraiphat, C; Tandhavanant, S; Wongsuvan, G; Ariyaprasert, P; Suntornsut, P; Thaipadungpanit, J; Teerawattanasook, N; Jutrakul, Y; Srisurat, N; +7 more... Chaimanee, P; Anukunananchai, J; Phiphitaporn, S; Srisamang, P; Chetchotisakd, P; West, TE; Peacock, SJ; (2016) Comparison of community-onset Staphylococcus argenteus and Staphylococcus aureus sepsis in Thailand: a prospective multicentre observational study. Clinical microbiology and infection, 22 (5). 458.e11-9. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2016.01.008

Chen, F; Wang, S; Jiang, X; Ding, S; Lu, Y; Kim, J; Sahinalp, SC; Shimizu, C; Burns, JC; Wright, VJ; +9 more... Png, E; Hibberd, ML; Lloyd, DD; Yang, H; Telenti, A; Bloss, CS; Fox, D; Lauter, K; Ohno-Machado, L; (2016) PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. Bioinformatics (Oxford, England), 33 (6). pp. 871-878. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/btw758 Full text not available from this repository.

Chenge, J; Kavanagh, ME; Driscoll, MD; McLean, KJ; Young, DB; Cortes, T; Matak-Vinkovic, D; Levy, CW; Rigby, SE; Leys, D; +2 more... Abell, C; Munro, AW; (2016) Structural characterization of CYP144A1 - a cytochrome P450 enzyme expressed from alternative transcripts in Mycobacterium tuberculosis. Scientific reports, 6. p. 26628. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep26628

Chinen, Isabel; Galas, Marcelo; Tuduri, Ezequiel; Vinas, Maria Rosa; Carbonari, Carolina; Della Gaspera, Anabella; Napoli, Daniela; Aanensen, David; Argimon, Silvia; Thomson, Nicholas; +25 more... Hughes, Darren; Baker, Stephen; Guzman;Verri, Caterina; Holden, Matthew TG; Abdala, Alejandra; Alvarez, Lucia; Alvez, Beatriz; Barros, Rosana; Budall, Shirley; Campano, Constanza; Chamosa, Luciana; Cheddie, Paul; Cisterna, Daniel; De Belder, Denise; Dropa, Milena; Durand, David; Elena, Alan; Fontecha, Gustavo; Huber, Claudia; Lemos, Ana Paula; Melli, Luciano; Paul, Roxana Elizabeth; Suarez, Lesly; Torres Flores, Julian; Campos, Josefina; (2016) Whole genome sequencing identifies independent outbreaks of Shigellosis in 2010 and 2011 in La Pampa Province, Argentina. BiorXiv. DOI: https://doi.org/10.1101/049940

Chung The, H; Rabaa, MA; Pham Thanh, D; De Lappe, N; Cormican, M; Valcanis, M; Howden, BP; Wangchuk, S; Bodhidatta, L; Mason, CJ; +12 more... Nguyen Thi Nguyen, T; Vu Thuy, D; Thompson, CN; Phu Huong Lan, N; Voong Vinh, P; Ha Thanh, T; Turner, P; Sar, P; Thwaites, G; Thomson, NR; Holt, KE; Baker, S; (2016) South Asia as a Reservoir for the Global Spread of Ciprofloxacin-Resistant Shigella sonnei: A Cross-Sectional Study. PLoS medicine, 13 (8). e1002055. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1002055

Clark, CG; Stensvold, CR; (2016) Blastocystis: Isolation, Xenic Cultivation, and Cryopreservation. Current protocols in microbiology, 43. 20A.1.1-20A.1.8. ISSN 1934-8525 DOI: https://doi.org/10.1002/cpmc.18

Coker, OO; Chaiprasert, A; Ngamphiw, C; Tongsima, S; Regmi, SM; Clark, TG; Ong, RT; Teo, YY; Prammananan, T; Palittapongarnpim, P; (2016) Genetic signatures of Mycobacterium tuberculosis Nonthaburi genotype revealed by whole genome analysis of isolates from tuberculous meningitis patients in Thailand. PeerJ, 4. e1905. ISSN 2167-8359 DOI: https://doi.org/10.7717/peerj.1905

Connor, TR; Owen, SV; Langridge, G; Connell, S; Nair, S; Reuter, S; Dallman, TJ; Corander, J; Tabing, KC; Le Hello, S; +15 more... Fookes, M; Doublet, B; Zhou, Z; Feltwell, T; Ellington, MJ; Herrera, S; Gilmour, M; Cloeckaert, A; Achtman, M; Parkhill, J; Wain, J; De Pinna, E; Weill, FX; Peters, T; Thomson, N; (2016) What's in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B. mBio, 7 (4). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.00527-16

Crepin, VF; Collins, JW; Habibzay, M; Frankel, G; (2016) Citrobacter rodentium mouse model of bacterial infection. Nature Research. DOI: https://doi.org/10.1038/nprot.2016.100 Full text not available from this repository.

Cuccui, J; Terra, VS; Bossé, JT; Naegeli, A; Abouelhadid, S; Li, Y; Lin, CW; Vohra, P; Tucker, AW; Rycroft, AN; +5 more... Maskell, DJ; Aebi, M; Langford, PR; Wren, BW; BRaDP1T Consortium; (2016) The N-linking glycosylation system from Actinobacillus pleuropneumoniae is required for adhesion and has potential use in glycoengineering. Open biology, 7 (1). ISSN 2046-2441 DOI: https://doi.org/10.1098/rsob.160212

Cuypers, B; Lecordier, L; Meehan, CJ; Van den Broeck, F; Imamura, H; Büscher, P; Dujardin, JC; Laukens, K; Schnaufer, A; Dewar, C; +12 more... Lewis, M; Balmer, O; Azurago, T; Kyei-Faried, S; Ohene, SA; Duah, B; Homiah, P; Mensah, EK; Anleah, F; Franco, JR; Pays, E; Deborggraeve, S; (2016) Apolipoprotein L1 Variant Associated with Increased Susceptibility to Trypanosome Infection. mBio, 7 (2). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.02198-15

Di Pilato, Vincenzo; Chiarelli, Adriana; Boinett, Christine J; Riccobono, Eleonora; Harris, Simon R; D'Andrea, Marco Maria; Thomson, Nicholas R; Rossolini, Gian Maria; Giani, Tommaso; (2016) Complete Genome Sequence of the First KPC-Type Carbapenemase-Positive Proteus mirabilis Strain from a Bloodstream Infection. Genome announcements, 4 (3). ISSN 2169-8287 DOI: https://doi.org/10.1128/genomeA.00607-16

Duchene, Sebastian; Duchene, David A; Di Giallonardo, Francesca; Eden, John-Sebastian; Geoghegan, Jemma L; Holt, Kathryn E; Ho, Simon YW; Holmes, Edward C; (2016) Cross-validation to select Bayesian hierarchical models in phylogenetics. BMC EVOLUTIONARY BIOLOGY, 16 (1). ISSN 1471-2148 DOI: https://doi.org/10.1186/s12862-016-0688-y

Duchene, Sebastian; Holt, Kathryn E; Weill, Francois-Xavier; Le Hello, Simon; Hawkey, Jane; Edwards, David J; Fourment, Mathieu; Holmes, Edward C; (2016) Genome-scale rates of evolutionary change in bacteria. MICROBIAL GENOMICS, 2 (11). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000094

Duong, VT; Vinh Phat, V; Thanh Tuyen, H; Dung, TT; Trung, PD; Minh, PV; Thi Phuong Tu, L; Campbell, JI; Phuc, HL; Ha, TT; +15 more... Ngoc, NM; Huong, NT; Thi Thanh Tam, P; Huong, DT; Xang, NV; Dong, N; Phuong, LT; Hung, NV; Phu, BD; Phuc, TM; Thwaites, GE; Vi, LL; Rabaa, MA; Thompson, CN; Baker, S; (2016) An evaluation of the Luminex xTAG Gastrointestinal Pathogen Panel assay for the detection of multiple diarrheal pathogens in fecal samples in Vietnam. Journal of clinical microbiology. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.03321-15

Elmi, A; Dorey, A; Jagatia, H; Gundogdu, O; Bajaj-Elliott, M; Wren, WB; Dorrell, N; (2016) Investigating the role of the bile salt sodium taurocholate in influencing Campylobacter jejuni outer membrane vesicle production, content and function. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648020 Full text not available from this repository.

Esson, D; Mather, AE; Scanlan, E; Gupta, S; de Vries, SP; Bailey, D; Harris, SR; McKinley, TJ; Méric, G; Berry, SK; +7 more... Mastroeni, P; Sheppard, SK; Christie, G; Thomson, NR; Parkhill, J; Maskell, DJ; Grant, AJ; (2016) Genomic variations leading to alterations in cell morphology of Campylobacter spp. Scientific reports, 6. p. 38303. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep38303

Fajardo, TJ; AlShaikhahmed, K; Roy, P; (2016) Generation of infectious RNA complexes in Orbiviruses: RNA-RNA interactions of genomic segments. Oncotarget. ISSN 1949-2553 DOI: https://doi.org/10.18632/oncotarget.12496

Feasey, NA; Hadfield, J; Keddy, KH; Dallman, TJ; Jacobs, J; Deng, X; Wigley, P; Barquist Barquist, L; Langridge, GC; Feltwell, T; +37 more... Harris, SR; Mather, AE; Fookes, M; Aslett, M; Msefula, C; Kariuki, S; Maclennan, CA; Onsare, RS; Weill, FX; Le Hello, S; Smith, AM; McClelland, M; Desai, P; Parry, CM; Cheesbrough, J; French, N; Campos, J; Chabalgoity, JA; Betancor, L; Hopkins, KL; Nair, S; Humphrey, TJ; Lunguya, O; Cogan, TA; Tapia, MD; Sow, SO; Tennant, SM; Bornstein, K; Levine, MM; Lacharme-Lora, L; Everett, DB; Kingsley, RA; Parkhill, J; Heyderman, RS; Dougan, G; Gordon, MA; Thomson, NR; (2016) Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings. Nature genetics. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.3644

Follador, R; Heinz, E; Wyres, KL; Ellington, MJ; Kowarik, M; Holt, KE; Thomson, NR; (2016) The diversity of Klebsiella pneumoniae surface polysaccharides. Microbial genomics, 2 (8). e000073. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000073

Fougere, Aurelie; Jackson, Andrew P; Bechtsi, Dafni Paraskevi; Braks, Joanna AM; Annoura, Takeshi; Fonager, Jannik; Spaccapelo, Roberta; Ramesar, Jai; Chevalley-Maurel, Severine; Klop, Onny; +10 more... van der Laan, Annelies MA; Tanke, Hans J; Kocken, Clemens HM; Pasini, Erica M; Khan, Shahid M; Bohme, Ulrike; van Ooij, Christiaan; Otto, Thomas D; Janse, Chris J; Franke-Fayard, Blandine; (2016) Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole. PLOS PATHOGENS, 12 (11). ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1005917

Francisco, AF; Jayawardhana, S; Lewis, MD; White, KL; Shackleford, DM; Chen, G; Saunders, J; Osuna-Cabello, M; Read, KD; Charman, SA; +2 more... Chatelain, E; Kelly, JM; (2016) Nitroheterocyclic drugs cure experimental Trypanosoma cruzi infections more effectively in the chronic stage than in the acute stage. Scientific reports, 6. p. 35351. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep35351

Furuya-Kanamori, L; Yakob, L; Riley, TV; Paterson, DL; Baker, P; McKenzie, SJ; Robson, J; Clements, AC; (2016) Community-Acquired Clostridium difficile Infection, Queensland, Australia. Emerging infectious diseases, 22 (9). pp. 1659-61. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2209.151115

Glover, L; Hutchinson, S; Alsford, S; Horn, D; (2016) VEX1 controls the allelic exclusion required for antigenic variation in trypanosomes. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1600344113

Gomez, A; Andreu, N; Ferrer-Navarro, M; Yero, D; Gibert, I; (2016) Triclosan-induced genes Rv1686c-Rv1687c and Rv3161c are not involved in triclosan resistance in Mycobacterium tuberculosis. Scientific reports, 6. p. 26221. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep26221

Gouliouris, T; Blane, B; Brodrick, HJ; Raven, KE; Ambridge, KE; Kidney, AD; Hadjirin, NF; Török, ME; Limmathurotsakul, D; Peacock, SJ; (2016) Comparison of two chromogenic media for the detection of vancomycin-resistant enterococcal carriage by nursing home residents. Diagnostic microbiology and infectious disease, 85 (4). pp. 409-12. ISSN 0732-8893 DOI: https://doi.org/10.1016/j.diagmicrobio.2016.04.026

Gundogdu, O; Davies, C; Liaw, J; Elmi, A; Hachani, A; Wren, WB; Dorrell, N; (2016) Investigation of the role of the Campylobacter jejuni Type VI secretion system in secretion of virulence factors and interactions with host cells. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648054 Full text not available from this repository.

Gundogdu, O; da Silva, DT; Mohammad, B; Elmi, A; Wren, BW; van Vliet, AH; Dorrell, N; (2016) The Campylobacter jejuni Oxidative Stress Regulator RrpB Is Associated with a Genomic Hypervariable Region and Altered Oxidative Stress Resistance. Frontiers in microbiology, 7. p. 2117. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2016.02117

Hamidian, Mohammad; Holt, Kathryn E; Pickard, Derek; Hall, Ruth M; (2016) A small Acinetobacter plasmid carrying the tet39 tetracycline resistance determinant. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 71 (1). pp. 269-271. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkv293

Hamilton, WL; Claessens, A; Otto, TD; Kekre, M; Fairhurst, RM; Rayner, JC; Kwiatkowski, D; (2016) Extreme mutation bias and high AT content in Plasmodium falciparum. Nucleic acids research. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gkw1259

Hantrakun, V; Rongkard, P; Oyuchua, M; Amornchai, P; Lim, C; Wuthiekanun, V; Day, NP; Peacock, SJ; Limmathurotsakul, D; (2016) Nutrient depleted soil is associated with the presence of Burkholderia pseudomallei. Applied and environmental microbiology, 82 (24). pp. 7086-7092. ISSN 0099-2240 DOI: https://doi.org/10.1128/AEM.02538-16

Harrison, EM; Ludden, C; Brodrick, HJ; Blane, B; Brennan, G; Morris, D; Coll, F; Reuter, S; Brown, NM; Holmes, MA; +5 more... O'Connell, B; Parkhill, J; Török, ME; Cormican, M; Peacock, SJ; (2016) Transmission of methicillin-resistant Staphylococcus aureus in long-term care facilities and their related healthcare networks. Genome medicine, 8 (1). p. 102. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-016-0353-5

Herberg, JA; Kaforou, M; Wright, VJ; Shailes, H; Eleftherohorinou, H; Hoggart, CJ; Cebey-López, M; Carter, MJ; Janes, VA; Gormley, S; +63 more... Shimizu, C; Tremoulet, AH; Barendregt, AM; Salas, A; Kanegaye, J; Pollard, AJ; Faust, SN; Patel, S; Kuijpers, T; Martinón-Torres, F; Burns, JC; Coin, LJ; Levin, M; IRIS Consortium; , COLLABORATORS; Carter, MJ; Coin, LJ; Eleftherohorinou, H; Fitzgerald, E; Gormley, S; Herberg, JA; Hoggart, C; Inwald, D; Janes, VA; Jones, KD; Kaforou, M; Mustafa, S; Nadel, S; Paulus, S; Pathan, N; Reid, J; Shailes, H; Wright, VJ; Levin, M; Faust, S; McCorkill, J; Patel, S; Pollard, AJ; Willis, L; Young, Z; Fink, C; Sumner, E; Kanegaye, JT; Shimizu, C; Tremoulet, A; Burns, J; Cebey-López, M; Salas, A; Grande, AJ; Rivero, I; Carballa, AG; Seco, JP; Sánchez, JM; Collazo, LR; Rodríguez-Tenreiro, C; Trillo, LV; Martinón-Torres, F; Barendregt, AM; van den Berg, M; Schonenberg, D; Kuijpers, T; Hibberd, ML; Emonts, M; (2016) Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children. JAMA, 316 (8). pp. 835-45. ISSN 0098-7484 DOI: https://doi.org/10.1001/jama.2016.11236

Hill, RJ; Ringel, A; Knuepfer, E; Moon, RW; Blackman, MJ; van Ooij, C; (2016) Regulation and essentiality of the START-domain-containing phospholipid transfer protein PFA0210c in malaria parasites. The Journal of biological chemistry, 291 (46). pp. 24280-24292. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M116.740506

Holmes, CW; Koo, SS; Osman, H; Wilson, S; Xerry, J; Gallimore, CI; Allen, DJ; Tang, JW; (2016) Predominance of enterovirus B and echovirus 30 as cause of viral meningitis in a UK population. Journal of clinical virology, 81. pp. 90-3. ISSN 1386-6532 DOI: https://doi.org/10.1016/j.jcv.2016.06.007

Holt, Kathryn; Kenyon, Johanna J; Hamidian, Mohammad; Schultz, Mark B; Pickard, Derek J; Dougan, Gordon; Hall, Ruth; (2016) Five decades of genome evolution in the globally distributed, extensively antibiotic-resistant Acinetobacter baumannii global clone 1. MICROBIAL GENOMICS, 2 (2). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000052

Hussein, M; Naz, N; Gundogdu, O; Elmi, A; Wren, WB; Dorrell, N; (2016) The role of Campylobacter jejuni fibronectinbinding proteins CadF and FlpA during bacterial interactions with host cells: comparison between 11168H and 81-176 strains. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648053 Full text not available from this repository.

Im, J; Nichols, C; Bjerregaard-Andersen, M; Sow, AG; Løfberg, S; Tall, A; Pak, GD; Aaby, P; Baker, S; Clemens, JD; +11 more... Espinoza, LM; Konings, F; May, J; Monteiro, M; Niang, A; Panzner, U; Park, SE; Schütt-Gerowitt, H; Wierzba, TF; Marks, F; von Kalckreuth, V; (2016) Prevalence of Salmonella Excretion in Stool: A Community Survey in 2 Sites, Guinea-Bissau and Senegal. Clinical infectious diseases, 62 Sup. S50-5. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ789 Full text not available from this repository.

Ingle, Danielle J; Valcanis, Mary; Kuzevski, Alex; Tauschek, Marija; Inouye, Michael; Stinear, Tim; Levine, Myron M; Robins-Browne, Roy M; Holt, Kathryn E; (2016) In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages. MICROBIAL GENOMICS, 2 (7). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000064

International Typhoid Consortium; Wong, VK; Holt, KE; Okoro, C; Baker, S; Pickard, DJ; Marks, F; Page, AJ; Olanipekun, G; Munir, H; +23 more... Alter, R; Fey, PD; Feasey, NA; Weill, FX; Le Hello, S; Hart, PJ; Kariuki, S; Breiman, RF; Gordon, MA; Heyderman, RS; Jacobs, J; Lunguya, O; Msefula, C; MacLennan, CA; Keddy, KH; Smith, AM; Onsare, RS; De Pinna, E; Nair, S; Amos, B; Dougan, G; Obaro, S; Watson, C; (2016) Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa. PLoS neglected tropical diseases, 10 (9). e0004781. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004781

Jacob, AS; Andersen, LO; Bitar, PP; Richards, VP; Shah, S; Stanhope, MJ; Stensvold, CR; Clark, CG; (2016) Blastocystis mitochondrial genomes appear to show multiple independent gains and losses of start and stop codons. Genome biology and evolution, 8 (11). pp. 3340-3350. ISSN 1759-6653 DOI: https://doi.org/10.1093/gbe/evw255

Jamrozy, DM; Harris, SR; Mohamed, N; Peacock, SJ; Tan, CY; Parkhill, J; Anderson, AS; Holden, MT; (2016) Pan-genomic perspective on the evolution of the Staphylococcus aureus USA300 epidemic. Microbial genomics, 2 (5). e000058. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000058

Jones, ML; Das, S; Belda, H; Collins, CR; Blackman, MJ; Treeck, M; (2016) A versatile strategy for rapid conditional genome engineering using loxP sites in a small synthetic intron in Plasmodium falciparum. Scientific reports, 6. p. 21800. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep21800

Jones-Dias, Daniela; Clemente, Lurdes; Egas, Conceicao; Froufe, Hugo; Sampaio, Daniel A; Vieira, Luis; Fookes, Maria; Thomson, Nicholas R; Manageiro, Vera; Canica, Manuela; (2016) Salmonella Enteritidis Isolate Harboring Multiple Efflux Pumps and Pathogenicity Factors, Shows Absence of O Antigen Polymerase Gene. FRONTIERS IN MICROBIOLOGY, 7. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2016.01130

Judge, K; Hunt, M; Reuter, S; Tracey, A; Quail, MA; Parkhill, J; Peacock, SJ; (2016) Comparison of bacterial genome assembly software for MinION data and their applicability to medical microbiology. Microbial genomics, 2 (9). e000085. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000085

Kanji, A; Hasan, R; Zaver, A; Ali, A; Imtiaz, K; Ashraf, M; Clark, TG; McNerney, R; Shafiq, S; Hasan, Z; (2016) Alternate efflux pump mechanism may contribute to drug resistance in extensively drug-resistant isolates of Mycobacterium tuberculosis. International journal of mycobacteriology, 5 Supp. S97-S98. ISSN 2212-5531 DOI: https://doi.org/10.1016/j.ijmyco.2016.09.064

Karlsson, SL; Thomson, N; Mutreja, A; Connor, T; Sur, D; Ali, M; Clemens, J; Dougan, G; Holmgren, J; Lebens, M; (2016) Retrospective Analysis of Serotype Switching of Vibrio cholerae O1 in a Cholera Endemic Region Shows It Is a Non-random Process. PLoS neglected tropical diseases, 10 (10). e0005044. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0005044

Kavishe, RA; Kaaya, RD; Nag, S; Krogsgaard, C; Notland, JG; Kavishe, AA; Ishengoma, D; Roper, C; Alifrangis, M; (2016) Molecular monitoring of Plasmodium falciparum super-resistance to sulfadoxine-pyrimethamine in Tanzania. Malaria journal, 15. p. 335. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1387-2

Kay, EJ; Yates, LE; Terra, VS; Cuccui, J; Wren, BW; (2016) Recombinant expression of Streptococcus pneumoniae capsular polysaccharides in Escherichia coli. Open biology, 6. p. 150243. ISSN 2046-2441 DOI: https://doi.org/10.1098/rsob.150243

Kerr, CL; Bhattacharyya, T; Xavier, SC; Barros, JH; Lima, VS; Jansen, AM; Miles, MA; (2016) Lineage-specific serology confirms Brazilian Atlantic forest lion tamarins, Leontopithecus chrysomelas and Leontopithecus rosalia, as reservoir hosts of Trypanosoma cruzi II (TcII). Parasites & vectors, 9 (1). p. 584. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-016-1873-y

Khalil, U; Younus, M; Asghar, N; Siddiqui, F; Gómez-Duarte, OG; Wren, BW; Bokhari, H; (2016) Phenotypic and genotypic characterization of enteroaggregative Escherichia coli isolates from pediatric population in Pakistan. APMIS, 124 (10). pp. 872-80. ISSN 0903-4641 DOI: https://doi.org/10.1111/apm.12577 Full text not available from this repository.

Khan, NH; Messenger, LA; Wahid, S; Sutherland, CJ; (2016) Phylogenetic position of Leishmania isolates from Khyber Pakhtunkhwa province of Pakistan. Experimental parasitology, 167. pp. 61-6. ISSN 0014-4894 DOI: https://doi.org/10.1016/j.exppara.2016.05.006

Khor, CC; Do, T; Jia, H; Nakano, M; George, R; Abu-Amero, K; Duvesh, R; Chen, LJ; Li, Z; Nongpiur, ME; +219 more... Perera, SA; Qiao, C; Wong, HT; Sakai, H; Barbosa de Melo, M; Lee, MC; Chan, AS; Azhany, Y; Dao, TL; Ikeda, Y; Perez-Grossmann, RA; Zarnowski, T; Day, AC; Jonas, JB; Tam, PO; Tran, TA; Ayub, H; Akhtar, F; Micheal, S; Chew, PT; Aljasim, LA; Dada, T; Luu, TT; Awadalla, MS; Kitnarong, N; Wanichwecharungruang, B; Aung, YY; Mohamed-Noor, J; Vijayan, S; Sarangapani, S; Husain, R; Jap, A; Baskaran, M; Goh, D; Su, DH; Wang, H; Yong, VK; Yip, LW; Trinh, TB; Makornwattana, M; Nguyen, TT; Leuenberger, EU; Park, KH; Wiyogo, WA; Kumar, RS; Tello, C; Kurimoto, Y; Thapa, SS; Pathanapitoon, K; Salmon, JF; Sohn, YH; Fea, A; Ozaki, M; Lai, JS; Tantisevi, V; Khaing, CC; Mizoguchi, T; Nakano, S; Kim, CY; Tang, G; Fan, S; Wu, R; Meng, H; Nguyen, TT; Tran, TD; Ueno, M; Martinez, JM; Ramli, N; Aung, YM; Reyes, RD; Vernon, SA; Fang, SK; Xie, Z; Chen, XY; Foo, JN; Sim, KS; Wong, TT; Quek, DT; Venkatesh, R; Kavitha, S; Krishnadas, SR; Soumittra, N; Shantha, B; Lim, BA; Ogle, J; de Vasconcellos, JP; Costa, VP; Abe, RY; de Souza, BB; Sng, CC; Aquino, MC; Kosior-Jarecka, E; Fong, GB; Tamanaja, VC; Fujita, R; Jiang, Y; Waseem, N; Low, S; Pham, HN; Al-Shahwan, S; Craven, ER; Khan, MI; Dada, R; Mohanty, K; Faiq, MA; Hewitt, AW; Burdon, KP; Gan, EH; Prutthipongsit, A; Patthanathamrongkasem, T; Catacutan, MA; Felarca, IR; Liao, CS; Rusmayani, E; Istiantoro, VW; Consolandi, G; Pignata, G; Lavia, C; Rojanapongpun, P; Mangkornkanokpong, L; Chansangpetch, S; Chan, JC; Choy, BN; Shum, JW; Than, HM; Oo, KT; Han, AT; Yong, VH; Ng, XY; Goh, SR; Chong, YF; Hibberd, ML; Seielstad, M; Png, E; Dunstan, SJ; Chau, NV; Bei, J; Zeng, YX; Karkey, A; Basnyat, B; Pasutto, F; Paoli, D; Frezzotti, P; Wang, JJ; Mitchell, P; Fingert, JH; Allingham, RR; Hauser, MA; Lim, ST; Chew, SH; Ebstein, RP; Sakuntabhai, A; Park, KH; Ahn, J; Boland, G; Snippe, H; Stead, R; Quino, R; Zaw, SN; Lukasik, U; Shetty, R; Zahari, M; Bae, HW; Oo, NL; Kubota, T; Manassakorn, A; Ho, WL; Dallorto, L; Hwang, YH; Kiire, CA; Kuroda, M; Djamal, ZE; Peregrino, JI; Ghosh, A; Jeoung, JW; Hoan, TS; Srisamran, N; Sandragasu, T; Set, SH; Doan, VH; Bhattacharya, SS; Ho, CL; Tan, DT; Sihota, R; Loon, SC; Mori, K; Kinoshita, S; Hollander, AI; Qamar, R; Wang, YX; Teo, YY; Tai, ES; Hartleben-Matkin, C; Lozano-Giral, D; Saw, SM; Cheng, CY; Zenteno, JC; Pang, CP; Bui, HT; Hee, O; Craig, JE; Edward, DP; Yonahara, M; Neto, JM; Guevara-Fujita, ML; Xu, L; Ritch, R; Liza-Sharmini, AT; Wong, TY; Al-Obeidan, S; Do, NH; Sundaresan, P; Tham, CC; Foster, PJ; Vijaya, L; Tashiro, K; Vithana, EN; Wang, N; Aung, T; (2016) Genome-wide association study identifies five new susceptibility loci for primary angle closure glaucoma. Nature genetics, 48 (5). pp. 556-62. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.3540 Full text not available from this repository.

Kim, JY; Goo, YK; Zo, YG; Ji, SY; Trimarsanto, H; To, S; Clark, TG; Price, RN; Auburn, S; (2016) Further Evidence of Increasing Diversity of Plasmodium vivax in the Republic of Korea in Recent Years. PloS one, 11 (3). e0151514. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0151514

Kishore, KG; Ghashghaei, O; Estarellas, C; Mestre, MM; Monturiol, C; Kielland, N; Kelly, JM; Francisco, AF; Jayawardhana, S; Muñoz-Torrero, D; +4 more... Pérez, B; Luque, FJ; Gámez-Montaño, R; Lavilla, R; (2016) Insertion of Isocyanides into N-Si Bonds: Multicomponent Reactions with Azines Leading to Potent Antiparasitic Compounds. Angewandte Chemie (International ed in English), 55 (31). pp. 8994-8. ISSN 1433-7851 DOI: https://doi.org/10.1002/anie.201604109 Full text not available from this repository.

Kishore, Kranti G; Ghashghaei, Ouldouz; Estarellas, Carolina; Mestre, M Mar; Monturiol, Cristina; Kielland, Nicola; Kelly, John M; Francisco, Amanda Fortes; Jayawardhana, Shiromani; Muñoz-Torrero, Diego; +4 more... Pérez, Belén; Luque, F Javier; Gámez-Montaño, Rocío; Lavilla, Rodolfo; (2016) Insertion of Isocyanides into N−Si Bonds: Multicomponent Reactions with Azines Leading to Potent Antiparasitic Compounds. Angewandte Chemie, 128 (31). pp. 9140-9144. ISSN 0044-8249 DOI: https://doi.org/10.1002/ange.201604109

Labbate, Maurizio; Orata, Fabini D; Petty, Nicola K; Jayatilleke, Nathasha D; King, William L; Kirchberger, Paul C; Allen, Chris; Mann, Gulay; Mutreja, Ankur; Thomson, Nicholas R; +2 more... Boucher, Yan; Charles, Ian G; (2016) A genomic island in Vibrio cholerae with VPI-1 site-specific recombination characteristics contains CRISPR-Cas and type VI secretion modules. SCIENTIFIC REPORTS, 6 (1). ISSN 2045-2322 DOI: https://doi.org/10.1038/srep36891

Lee, I Russel; Molton, James S; Wyres, Kelly L; Gorrie, Claire; Wong, Jocelyn; Hoh, Chu Han; Teo, Jeanette; Kalimuddin, Shirin; Lye, David C; Archuleta, Sophia; +2 more... Holt, Kathryn E; Gan, Yunn-Hwen; (2016) Differential host susceptibility and bacterial virulence factors driving Klebsiella liver abscess in an ethnically diverse population. SCIENTIFIC REPORTS, 6. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep29316

Leung, JM; Hong, CT; Trung, NH; Thi, HN; Minh, CN; Thi, TV; Hong, DT; Man, DN; Knowles, SC; Wolbers, M; +4 more... Hoang, NleT; Thwaites, G; Graham, AL; Baker, S; (2016) The impact of albendazole treatment on the incidence of viral- and bacterial-induced diarrhea in school children in southern Vietnam: study protocol for a randomized controlled trial. Trials, 17 (1). p. 279. ISSN 1745-6215 DOI: https://doi.org/10.1186/s13063-016-1406-1

Lewis, MD; Francisco, AF; Taylor, MC; Jayawardhana, S; Kelly, JM; (2016) Host and parasite genetics shape a link between Trypanosoma cruzi infection dynamics and chronic cardiomyopathy. Cellular microbiology. ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12584

Lewis, MD; Kelly, JM; (2016) Putting Infection Dynamics at the Heart of Chagas Disease. Trends in parasitology. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2016.08.009

Li, Y; Bossé, JT; Williamson, SM; Maskell, DJ; Tucker, AW; Wren, BW; Rycroft, AN; Langford, PR; BRADP1T Consortium; (2016) Actinobacillus pleuropneumoniae serovar 8 predominates in England and Wales. The Veterinary record, 179 (11). p. 276. ISSN 0042-4900 DOI: https://doi.org/10.1136/vr.103820

Lim, C; Takahashi, E; Hongsuwan, M; Wuthiekanun, V; Thamlikitkul, V; Hinjoy, S; Day, NP; Peacock, SJ; Limmathurotsakul, D; (2016) Epidemiology and burden of multidrug-resistant bacterial infection in a developing country. eLife, 5. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.18082

Limmathurotsakul, D; Golding, N; Dance, DA; Messina, JP; Pigott, DM; Moyes, CL; Rolim, DB; Bertherat, E; Day, NP; Peacock, SJ; +1 more... Hay, SI; (2016) Predicted global distribution of Burkholderia pseudomallei and burden of melioidosis. Nature microbiology, 1 (1). ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2015.8

Lin, W; Florez de Sessions, P; Teoh, GH; Mohamed, AN; Zhu, YO; Koh, VH; Ang, ML; Dedon, PC; Hibberd, ML; Alonso, S; (2016) Transcriptional profiling of Mycobacterium tuberculosis exposed to in vitro lysosomal stress. Infection and immunity. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00072-16 Full text not available from this repository.

Lu, L; Van Dung, N; Bryant, JE; Carrique-Mas, J; Van Cuong, N; Anh, PH; Rabaa, MA; Baker, S; Simmonds, P; Woolhouse, ME; (2016) Evolution and phylogeographic dissemination of endemic porcine picornaviruses in Vietnam. Virus evolution, 2 (1). vew001. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vew001

Lulla, V; Lulla, A; Wernike, K; Aebischer, A; Beer, M; Roy, P; (2016) Assembly of replication-incompetent African horse sickness virus particles: rational design of vaccines for all serotypes. Journal of virology, 90 (16). pp. 7405-14. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.00548-16

Lynch, CA; Cook, J; Nanyunja, S; Bruce, J; Bhasin, A; Drakeley, C; Roper, C; Pearce, R; Rwakimari, JB; Abeku, TA; +2 more... Corran, P; Cox, J; (2016) Application of Serological Tools and Spatial Analysis to Investigate Malaria Transmission Dynamics in Highland Areas of Southwest Uganda. The American journal of tropical medicine and hygiene, 94 (6). pp. 1251-8. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.15-0653

Maishman, L; Obado, SO; Alsford, S; Bart, JM; Chen, WM; Ratushny, AV; Navarro, M; Horn, D; Aitchison, JD; Chait, BT; +2 more... Rout, MP; Field, MC; (2016) Co-dependence between trypanosome nuclear lamina components in nuclear stability and control of gene expression. Nucleic acids research. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gkw751

Makendi Njock, EC; (2016) The phylogenetic and phenotypic analysis of Salmonella enterica serovar Weltevreden. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02550034

Makendi, C; Page, AJ; Wren, BW; Le Thi Phuong, T; Clare, S; Hale, C; Goulding, D; Klemm, EJ; Pickard, D; Okoro, C; +10 more... Hunt, M; Thompson, CN; Phu Huong Lan, N; Tran Do Hoang, N; Thwaites, GE; Le Hello, S; Brisabois, A; Weill, FX; Baker, S; Dougan, G; (2016) A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions. PLoS neglected tropical diseases, 10 (2). e0004446. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004446

Martinón-Torres, F; Png, E; Khor, CC; Davila, S; Wright, VJ; Sim, KS; Vega, A; Fachal, L; Inwald, D; Nadel, S; +86 more... Carrol, ED; Martinón-Torres, N; Alonso, SM; Carracedo, A; Morteruel, E; López-Bayón, J; Torre, AC; Monge, CC; de Aguilar, PA; Torné, EE; Martínez-Padilla, MD; Martinón-Sánchez, JM; Levin, M; Hibberd, ML; Salas, A; ESIGEM network; ESPID meningococcal consortium – UK; EUCLIDS consortium members - Imperial College London (www.euclid; , COLLABORATORS; Gómez-Carballa, A; Cebey, M; Sánchez, NG; Calle, IR; Grande, AJ; Pardo-Seco, J; Barral-Arca, R; Pischedda, S; Currás-Tuala, MJ; Rodriguez-Tenreiro, C; Redondo-Collazo, L; Sánchez, FP; de la Cruz Moreno, J; Millán Miralles, ML; García Rodríguez, JL; García, SR; Doce, AH; Barba, Á, F; Pallares, MO; Romero, AR; Muñoz Bonet, JI; Cancela, MS; Bergara, EO; Arriortua, AB; Navarro Gómez, ML; Fernández, MS; Martínez, XA; Ortega, Á, C; Rosso, SP; Caballero Macarrón, CP; Menchón, NM; Sánchez, FG; Garzón, MG; García, MD; Sánchez Granados, JM; Ayestarán, OS; Payo, R; Palazón, SC; León León, MC; Dominguez, SR; Villanueba, DA; Alonso Martín, JA; Orayen, CG; Iturbe, EB; Alonso Salas, MT; Fernández, IQ; Booy, R; Coin, LJ; Eleftherohorinou, H; Faust, S; Galassini, R; Habibi, P; Haralambous, E; Kroll, S; Langford, P; Pathan, N; Pollard, AJ; Abdulla, F; Agapow, P; Bellos, E; Hamilton, S; Herberg, JA; Hoggart, C; Kaforou, M; Mashbat, M; Mustafa, S; Sancho-Shimizu, V; (2016) Natural resistance to Meningococcal Disease related to CFH loci: Meta-analysis of genome-wide association studies. Scientific reports, 6. p. 35842. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep35842

Mascotti, ML; Juri Ayub, M; Furnham, N; Thornton, JM; Laskowski, RA; (2016) Chopping and changing: The evolution of the flavin-dependent monooxygenases. Journal of molecular biology, 428 (15). pp. 3131-46. ISSN 0022-2836 DOI: https://doi.org/10.1016/j.jmb.2016.07.003

Mather, Alison E; Lawson, Becki; de Pinna, Elizabeth; Wigley, Paul; Parkhill, Julian; Thomson, Nicholas R; Page, Andrew J; Holmes, Mark A; Paterson, Gavin K; (2016) Genomic Analysis of Salmonella enterica Serovar Typhimurium from Wild Passerines in England and Wales. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82 (22). pp. 6728-6735. ISSN 0099-2240 DOI: https://doi.org/10.1128/AEM.01660-16

Maude, RR; Ghose, A; Samad, R; de Jong, HK; Fukushima, M; Wijedoru, L; Hassan, MU; Hossain, MA; Karim, MR; Sayeed, AA; +19 more... van den Ende, S; Pal, S; Zahed, AS; Rahman, W; Karnain, R; Islam, R; Tran, DT; Ha, TT; Pham, AH; Campbell, JI; van Doorn, HR; Maude, RJ; van der Poll, T; Wiersinga, WJ; Day, NP; Baker, S; Dondorp, AM; Parry, CM; Faiz, MA; (2016) A prospective study of the importance of enteric fever as a cause of non-malarial febrile illness in patients admitted to Chittagong Medical College Hospital, Bangladesh. BMC infectious diseases, 16 (1). p. 567. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-016-1886-3

Mbugi, EV; Katale, BZ; Streicher, EM; Keyyu, JD; Kendall, SL; Dockrell, HM; Michel, AL; Rweyemamu, MM; Warren, RM; Matee, MI; +3 more... van Helden, PD; Couvin, D; Rastogi, N; (2016) Mapping of Mycobacterium tuberculosis Complex Genetic Diversity Profiles in Tanzania and Other African Countries. PloS one, 11 (5). e0154571. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0154571

McCarthy, AJ; Negus, D; Martin, P; Pechincha, C; Oswald, E; Stabler, RA; Taylor, PW; (2016) Pathoadaptive Mutations of Escherichia coli K1 in Experimental Neonatal Systemic Infection. PloS one, 11 (11). e0166793. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0166793

McNally, A; Thomson, NR; Reuter, S; Wren, BW; (2016) 'Add, stir and reduce': Yersinia spp. as model bacteria for pathogen evolution. Nature reviews Microbiology, 14 (3). pp. 177-90. ISSN 1740-1526 DOI: https://doi.org/10.1038/nrmicro.2015.29 Full text not available from this repository.

McNerney, R; Clark, TG; Campino, S; Rodrigues, C; Dolinger, D; Smith, L; Cabibbe, AM; Dheda, K; Schito, M; (2016) Removing the bottleneck in whole genome sequencing of M. tuberculosis for rapid drug resistance analysis: a call to action. International journal of infectious diseases. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2016.11.422

Melo-Filho, CC; Dantas, RF; Braga, RC; Neves, BJ; Senger, MR; Valente, WC; Rezende-Neto, JM; Chaves, WT; Muratov, EN; Paveley, RA; +5 more... Furnham, N; Kamentsky, L; Carpenter, AE; Silva-Junior, FP; Andrade, CH; (2016) QSAR-Driven Discovery of Novel Chemical Scaffolds Active against Schistosoma mansoni. Journal of chemical information and modeling, 56 (7). pp. 1357-72. ISSN 1549-9596 DOI: https://doi.org/10.1021/acs.jcim.6b00055

MenAfriCar Consortium; , COLLABORATORS; Ali, O; Aseffa, A; Bedru Omer, A; Lema, Ts; Moti Demissie, T; Tekletsion, Y; Worku, A; Guebre Xabher, H; +69 more... Yamuah, L; Boukary, RM; Collard, JM; Dano, ID; Habiboulaye, I; Issaka, B; Jusot, JF; Ousmane, S; Rabe, I; Daugla, DM; Gami, JP; Gamougam, K; Mbainadji, L; Naibei, N; Narbé, M; Toralta, J; Berthe, A; Diallo, K; Keita, M; Coulibaly, A; Onwuchekwa, U; Sow, SO; Tamboura, B; Traore, A; Toure, A; Clark, T; Mayer, L; Amodu, M; Beida, O; Gadzama, G; Omotara, B; Zailani, S; Yahya, Sh; Chandramohan, D; Greenwood, BM; Hassan-King, M; Manigart, O; Nascimento, M; Stuart, JM; Woukeu, A; Basta, NE; Bai, X; Borrow, R; Findlow, H; Alavo, S; Bassene, H; Diallo, A; Dieng, M; Doucouré, S; Gomis, JF; Ndiaye, A; Sokhna, Ch; Trape, JF; Bugri, A; Forgor, A; Hodgson, A; Osei, I; Quaye, SL; Williams, J; Wontuo, P; Irving, T; Trotter, CL; Karachaliou, A; Bennett, J; Hill, D; Harrison, O; Maiden, MC; Rebbetts, L; Watkins, E; (2016) Household transmission of Neisseria meningitidis in the African meningitis belt: a longitudinal cohort study. The Lancet Global health, 4 (12). e989-e995. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(16)30244-3

Messenger, LA; Ramirez, JD; Llewellyn, MS; Guhl, F; Miles, MA; (2016) Importation of Hybrid Human-Associated Trypanosoma cruzi Strains of Southern South American Origin, Colombia. Emerging infectious diseases, 22 (8). pp. 1452-5. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2208.150786

Miari, VF; Ison, CA; (2016) Is there a role for topical antiseptics in the treatment of gonorrhoea? Sexually transmitted infections. ISSN 1368-4973 DOI: https://doi.org/10.1136/sextrans-2016-053028 Full text not available from this repository.

Miles, Alistair; Iqbal, Zamin; Vauterin, Paul; Pearson, Richard; Campino, Susana; Theron, Michel; Gould, Kelda; Mead, Daniel; Drury, Eleanor; O'Brien, John; +12 more... Ruano Rubio, Valentin; MacInnis, Bronwyn; Mwangi, Jonathan; Samarakoon, Upeka; Ranford-Cartwright, Lisa; Ferdig, Michael; Hayton, Karen; Su, Xin-Zhuan; Wellems, Thomas; Rayner, Julian; McVean, Gil; Kwiatkowski, Dominic; (2016) Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum. Genome research, 26 (9). pp. 1288-1299. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.203711.115

Mohl, BP; Roy, P; (2016) Cellular casein kinase 2 and protein phosphatase 2A modulate replication site assembly of Bluetongue virus. The Journal of biological chemistry, 291 (28). pp. 14566-74. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M116.714766

Mohl, B.-, P; Bartlett, C; Mankouri, J; Harris, M; (2016) Early events in the generation of autophagosomes are required for the formation of membrane structures involved in hepatitis C virus genome replication. The Journal of general virology, 97. pp. 680-693. ISSN 0022-1317 DOI: https://doi.org/10.1099/jgv.0.000387 Full text not available from this repository.

Moon, RW; Sharaf, H; Hastings, CH; Ho, YS; Nair, MB; Rchiad, Z; Knuepfer, E; Ramaprasad, A; Mohring, F; Amir, A; +7 more... Yusuf, NA; Hall, J; Almond, N; Lau, YL; Pain, A; Blackman, MJ; Holder, AA; (2016) Normocyte-binding protein required for human erythrocyte invasion by the zoonotic malaria parasite Plasmodium knowlesi. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1522469113

Moradigaravand, D; Boinett, CJ; Martin, V; Peacock, SJ; Parkhill, J; (2016) Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland. Genome research, 26 (8). pp. 1101-9. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.205245.116

Moradigaravand, D; Grandjean, L; Martinez, E; Li, H; Zheng, J; Coronel, J; Moore, D; Török, ME; Sintchenko, V; Huang, H; +4 more... Javid, B; Parkhill, J; Peacock, SJ; Köser, CU; (2016) DfrA-thyA double deletion in para-aminosalicylic acid resistant Mycobacterium tuberculosis Beijing strains. Antimicrobial agents and chemotherapy, 60 (6). pp. 3864-7. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00253-16

Moradigaravand, D; Reuter, S; Martin, V; Peacock, SJ; Parkhill, J; (2016) The dissemination of multidrug-resistant Enterobacter cloacae throughout the UK and Ireland. Nature microbiology, 1. p. 16173. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2016.173

Mottram, L; Speak, AO; Selek, RM; Cambridge, EL; McIntyre, Z; Kane, L; Mukhopadhyay, S; Grove, C; Colin, A; Brandt, C; +9 more... Duque-Correa, MA; Forbester, J; Nguyen, TA; Hale, C; Vasilliou, GS; Arends, MJ; Wren, BW; Dougan, G; Clare, S; (2016) Infection Susceptibility in Gastric Intrinsic Factor (Vitamin B12)-Defective Mice Is Subject to Maternal Influences. mBio, 7 (3). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.00830-16

Mtove, G; Mugasa, JP; Messenger, LA; Malima, RC; Mangesho, P; Magogo, F; Plucinski, M; Hashimu, R; Matowo, J; Shepard, D; +32 more... Batengana, B; Cook, J; Emidi, B; Halasa, Y; Kaaya, R; Kihombo, A; Lindblade, KA; Makenga, G; Mpangala, R; Mwambuli, A; Mzava, R; Mziray, A; Olang, G; Oxborough, RM; Seif, M; Sambu, E; Samuels, A; Sudi, W; Thomas, J; Weston, S; Alilio, M; Binkin, N; Gimnig, J; Kleinschmidt, I; McElroy, P; Moulton, LH; Norris, L; Ruebush, T; Venkatesan, M; Rowland, M; Mosha, FW; Kisinza, WN; (2016) The effectiveness of non-pyrethroid insecticide-treated durable wall lining to control malaria in rural Tanzania: study protocol for a two-armed cluster randomized trial. BMC public health, 16 (1). p. 633. ISSN 1471-2458 DOI: https://doi.org/10.1186/s12889-016-3287-3

Murray, L; Mobegi, VA; Duffy, CW; Assefa, SA; Kwiatkowski, DP; Laman, E; Loua, KM; Conway, DJ; (2016) Microsatellite genotyping and genome-wide single nucleotide polymorphism-based indices of Plasmodium falciparum diversity within clinical infections. Malaria journal, 15 (1). p. 275. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1324-4

Musonda, KG; Nyonda, M; Filteau, S; Kasonka, L; Monze, M; Gompels, UA; (2016) Increased Cytomegalovirus Secretion and Risks of Infant Infection by Breastfeeding Duration From Maternal Human Immunodeficiency Virus Positive Compared to Negative Mothers in Sub-Saharan Africa. Journal of the Pediatric Infectious Diseases Society, 5 (2). pp. 138-46. ISSN 2048-7193 DOI: https://doi.org/10.1093/jpids/piw015

Mwangala, S; Musonda, KG; Monze, M; Musukwa, KK; Fylkesnes, K; (2016) Accuracy in HIV Rapid Testing among Laboratory and Non-laboratory Personnel in Zambia: Observations from the National HIV Proficiency Testing System. PloS one, 11 (1). e0146700. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0146700

Natale, A; Stelling, J; Meledandri, M; Messenger, LA; D'Ancona, F; (2016) Use of WHONET-SaTScan system for simulated real-time detection of antimicrobial resistance clusters in a hospital in Italy, 2012 to 2014. Euro surveillance, 22 (11). ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2017.22.11.30484

Neves, BJ; Dantas, RF; Senger, MR; Melo-Filho, CC; Valente, WC; de Almeida, AC; Rezende-Neto, JM; Lima, EF; Paveley, R; Furnham, N; +6 more... Muratov, E; Kamentsky, L; Carpenter, AE; Braga, RC; Silva-Junior, FP; Andrade, CH; (2016) Discovery of New Anti-Schistosomal Hits by Integration of QSAR-Based Virtual Screening and High Content Screening. Journal of medicinal chemistry, 59 (15). pp. 7075-88. ISSN 0022-2623 DOI: https://doi.org/10.1021/acs.jmedchem.5b02038

Njamkepo, E; Fawal, N; Tran-Dien, A; Hawkey, J; Strockbine, N; Jenkins, C; Talukder, KA; Bercion, R; Kuleshov, K; Kolínská, R; +62 more... Russell, JE; Kaftyreva, L; Accou-Demartin, M; Karas, A; Vandenberg, O; Mather, AE; Mason, CJ; Page, AJ; Ramamurthy, T; Bizet, C; Gamian, A; Carle, I; Sow, AG; Bouchier, C; Wester, AL; Lejay-Collin, M; Fonkoua, MC; Hello, SL; Blaser, MJ; Jernberg, C; Ruckly, C; Mérens, A; Page, AL; Aslett, M; Roggentin, P; Fruth, A; Denamur, E; Venkatesan, M; Bercovier, H; Bodhidatta, L; Chiou, CS; Clermont, D; Colonna, B; Egorova, S; Pazhani, GP; Ezernitchi, AV; Guigon, G; Harris, SR; Izumiya, H; Korzeniowska-Kowal, A; Lutyńska, A; Gouali, M; Grimont, F; Langendorf, C; Marejková, M; Peterson, LA; Perez-Perez, G; Ngandjio, A; Podkolzin, A; Souche, E; Makarova, M; Shipulin, GA; Ye, C; Žemličková, H; Herpay, M; Grimont, PA; Parkhill, J; Sansonetti, P; Holt, KE; Brisse, S; Thomson, NR; Weill, FX; (2016) Global phylogeography and evolutionary history of Shigella dysenteriae type 1. Nature microbiology, 1. p. 16027. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2016.27 Full text not available from this repository.

Oguike, MC; Falade, CO; Shu, E; Enato, IG; Watila, I; Baba, ES; Bruce, J; Webster, J; Hamade, P; Meek, S; +4 more... Chandramohan, D; Sutherland, CJ; Warhurst, D; Roper, C; (2016) Molecular determinants of sulfadoxine-pyrimethamine resistance in Plasmodium falciparum in Nigeria and the regional emergence of dhps 431V. International journal for parasitology Drugs and drug resistance, 6 (3). pp. 220-229. ISSN 2211-3207 DOI: https://doi.org/10.1016/j.ijpddr.2016.08.004

Olmo, F; Costas, M; Marín, C; Rosales, MJ; Martín-Escolano, R; Cussó, O; Gutierrez-Sánchez, R; Ribas, X; Sánchez-Moreno, M; (2016) Tetradentate polyamines as efficient metallodrugs for Chagas disease treatment in murine model. Journal of chemotherapy (Florence, Italy), 29 (2). pp. 83-93. ISSN 1120-009X DOI: https://doi.org/10.1080/1120009X.2016.1190536

Olmo, F; Cussó, O; Marín, C; Rosales, MJ; Urbanová, K; Krauth-Siegel, RL; Costas, M; Ribas, X; Sánchez-Moreno, M; (2016) In vitro and in vivo identification of tetradentated polyamine complexes as highly efficient metallodrugs against Trypanosoma cruzi. Experimental parasitology, 164. pp. 20-30. ISSN 0014-4894 DOI: https://doi.org/10.1016/j.exppara.2016.02.004 Full text not available from this repository.

Pach, A; Warren, M; Chang, I; Im, J; Nichols, C; Meyer, CG; Pak, GD; Panzner, U; Park, SE; von Kalckreuth, V; +6 more... Baker, S; Rabezanahary, H; Rakotondrainiarivelo, JP; Raminosoa, TM; Rakotozandrindrainy, R; Marks, F; (2016) A Qualitative Study Investigating Experiences, Perceptions, and Healthcare System Performance in Relation to the Surveillance of Typhoid Fever in Madagascar. Clinical infectious diseases, 62 Sup. S69-75. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ892 Full text not available from this repository.

Pallett, MA; Crepin, VF; Serafini, N; Habibzay, M; Kotik, O; Sanchez-Garrido, J; Di Santo, JP; Shenoy, AR; Berger, CN; Frankel, G; (2016) Bacterial virulence factor inhibits caspase-4/11 activation in intestinal epithelial cells. Mucosal immunology, 10 (3). pp. 602-612. ISSN 1933-0219 DOI: https://doi.org/10.1038/mi.2016.77

Pang, J; Lindblom, A; Tolfvenstam, T; Thein, TL; Naim, AN; Ling, L; Chow, A; Chen, MI; Ooi, EE; Leo, YS; +1 more... Hibberd, ML; (2016) Discovery and Validation of Prognostic Biomarker Models to Guide Triage among Adult Dengue Patients at Early Infection. PloS one, 11 (6). e0155993. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0155993

Patel, A; Mohl, BP; Roy, P; (2016) Entry of Bluetongue virus capsid requires the late endosomal specific lipid lysobisphosphatidic acid. The Journal of biological chemistry, 291 (23). pp. 12408-19. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M115.700856

Patin, EC; Willcocks, S; Orr, S; Ward, TH; Lang, R; Schaible, UE; (2016) Mincle-mediated anti-inflammatory IL-10 response counter-regulates IL-12 in vitro. Innate immunity, 22 (3). pp. 181-5. ISSN 1753-4259 DOI: https://doi.org/10.1177/1753425916636671

Pearson, Richard D; Amato, Roberto; Auburn, Sarah; Miotto, Olivo; Almagro-Garcia, Jacob; Amaratunga, Chanaki; Suon, Seila; Mao, Sivanna; Noviyanti, Rintis; Trimarsanto, Hidayat; +34 more... Marfurt, Jutta; Anstey, Nicholas M; William, Timothy; Boni, Maciej F; Dolecek, Christiane; Hien, Tinh Tran; White, Nicholas J; Michon, Pascal; Siba, Peter; Tavul, Livingstone; Harrison, Gabrielle; Barry, Alyssa; Mueller, Ivo; Ferreira, Marcelo U; Karunaweera, Nadira; Randrianarivelojosia, Milijaona; Gao, Qi; Hubbart, Christina; Hart, Lee; Jeffery, Ben; Drury, Eleanor; Mead, Daniel; Kekre, Mihir; Campino, Susana; Manske, Magnus; Cornelius, Victoria J; MacInnis, Bronwyn; Rockett, Kirk A; Miles, Alistair; Rayner, Julian C; Fairhurst, Rick M; Nosten, Francois; Price, Ric N; Kwiatkowski, Dominic P; (2016) Genomic analysis of local variation and recent evolution in Plasmodium vivax. Nature genetics, 48 (8). pp. 959-964. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.3599

Pettersson, JH; Eldholm, V; Seligman, SJ; Lundkvist, Å; Falconar, AK; Gaunt, MW; Musso, D; Nougairède, A; Charrel, R; Gould, EA; +1 more... de Lamballerie, X; (2016) How Did Zika Virus Emerge in the Pacific Islands and Latin America? mBio, 7 (5). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.01239-16

Pham Thanh, D; Karkey, A; Dongol, S; Ho Thi, N; Thompson, CN; Rabaa, MA; Arjyal, A; Holt, KE; Wong, V; Tran Vu Thieu, N; +13 more... Voong Vinh, P; Ha Thanh, T; Pradhan, A; Shrestha, SK; Gajurel, D; Pickard, D; Parry, CM; Dougan, G; Wolbers, M; Dolecek, C; Thwaites, GE; Basnyat, B; Baker, S; (2016) A novel ciprofloxacin-resistant subclade of H58 Salmonella Typhi is associated with fluoroquinolone treatment failure. eLife, 5. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.14003

Pham Thanh, D; Thanh Tuyen, H; Nguyen Thi Nguyen, T; Chung The, H; Wick, RR; Thwaites, GE; Baker, S; Holt, KE; (2016) Inducible colistin resistance via a disrupted plasmid-borne mcr-1 gene in a 2008 Vietnamese Shigella sonnei isolate. The Journal of antimicrobial chemotherapy. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkw173 Full text not available from this repository.

Pham Thanh, D; Thompson, CN; Rabaa, MA; Sona, S; Sopheary, S; Kumar, V; Moore, C; Tran Vu Thieu, N; Wijedoru, L; Holt, KE; +8 more... Wong, V; Pickard, D; Thwaites, GE; Day, N; Dougan, G; Turner, P; Parry, CM; Baker, S; (2016) The Molecular and Spatial Epidemiology of Typhoid Fever in Rural Cambodia. PLoS neglected tropical diseases, 10 (6). e0004785. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004785

Phan, MVT; Anh, PH; Cuong, NV; Munnink, BBO; van der Hoek, L; My, PT; Tri, TN; Bryant, JE; Baker, S; Thwaites, G; +5 more... Woolhouse, M; Kellam, P; Rabaa, MA; Cotten, M; VIZIONS Consortium; (2016) Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection. Virus evolution, 2 (2). vew027. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vew027

Phelan, J; Coll, F; McNerney, R; Ascher, DB; Pires, DE; Furnham, N; Coeck, N; Hill-Cawthorne, GA; Nair, MB; Mallard, K; +6 more... Ramsay, A; Campino, S; Hibberd, ML; Pain, A; Rigouts, L; Clark, TG; (2016) Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance. BMC medicine, 14 (1). p. 31. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-016-0575-9

Phelan, J; O'Sullivan, DM; Machado, D; Ramos, J; Whale, AS; O'Grady, J; Dheda, K; Campino, S; McNerney, R; Viveiros, M; +2 more... Huggett, JF; Clark, TG; (2016) The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs. Genome medicine, 8 (1). p. 132. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-016-0385-x

Phelan, JE; Coll, F; Bergval, I; Anthony, RM; Warren, R; Sampson, SL; Gey van Pittius, NC; Glynn, JR; Crampin, AC; Alves, A; +20 more... Bessa, TB; Campino, S; Dheda, K; Grandjean, L; Hasan, R; Hasan, Z; Miranda, A; Moore, D; Panaiotov, S; Perdigao, J; Portugal, I; Sheen, P; de Oliveira Sousa, E; Streicher, EM; van Helden, PD; Viveiros, M; Hibberd, ML; Pain, A; McNerney, R; Clark, TG; (2016) Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages. BMC genomics, 17 (1). p. 151. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-016-2467-y

Phu Huong Lan, N; Le Thi Phuong, T; Nguyen Huu, H; Thuy, L; Mather, AE; Park, SE; Marks, F; Thwaites, GE; Van Vinh Chau, N; Thompson, CN; +1 more... Baker, S; (2016) Invasive Non-typhoidal Salmonella Infections in Asia: Clinical Observations, Disease Outcome and Dominant Serovars from an Infectious Disease Hospital in Vietnam. PLoS neglected tropical diseases, 10 (8). e0004857. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004857

Pollard, DJ; Young, JC; Covarelli, V; Herrera-León, S; Connor, TR; Fookes, M; Walker, D; Echeita, A; Thomson, NR; Berger, CN; +1 more... Frankel, G; (2016) The type III secretion system effector SeoC of Salmonella enterica subspecies salamae and arizonae ADP-ribosylates Src and inhibits opsono-phagocytosis. Infection and immunity. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00704-16

Polycarpou, A; Holland, MJ; Karageorgiou, I; Eddaoudi, A; Walker, SL; Willcocks, S; Lockwood, DN; (2016) Mycobacterium leprae Activates Toll-Like Receptor-4 Signaling and Expression on Macrophages Depending on Previous Bacillus Calmette-Guerin Vaccination. Frontiers in cellular and infection microbiology, 6. p. 72. ISSN 2235-2988 DOI: https://doi.org/10.3389/fcimb.2016.00072

Pond, MJ; Hall, CL; Miari, VF; Cole, M; Laing, KG; Jagatia, H; Harding-Esch, E; Monahan, IM; Planche, T; Hinds, J; +4 more... Ison, CA; Chisholm, S; Butcher, PD; Sadiq, ST; (2016) Accurate detection of Neisseria gonorrhoeae ciprofloxacin susceptibility directly from genital and extragenital clinical samples: towards genotype-guided antimicrobial therapy. The Journal of antimicrobial chemotherapy, 71 (4). pp. 897-902. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkv432

Preston, MD; Stabler, RA; (2016) From FASTQ to Function: In Silico Methods for Processing Next-Generation Sequencing Data. In: Roberts, AP; Mullany, P, (eds.) Clostridium difficile. Springer, New York, pp. 23-33. ISBN 9781493963591 DOI: https://doi.org/10.1007/978-1-4939-6361-4_3 Full text not available from this repository.

Raven, KE; Reuter, S; Gouliouris, T; Reynolds, R; Russell, JE; Brown, NM; Török, ME; Parkhill, J; Peacock, SJ; (2016) Genome-based characterization of hospital-adapted Enterococcus faecalis lineages. Nature microbiology, 1 (3). ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2015.33 Full text not available from this repository.

Raven, KE; Reuter, S; Gouliouris, T; Reynolds, R; Russell, JE; Brown, NM; Török, ME; Parkhill, J; Peacock, SJ; (2016) Genome-based characterization of hospital-adapted Enterococcus faecalis lineages. Nature microbiology, 1. p. 15033. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2015.33 Full text not available from this repository.

Raven, KE; Reuter, S; Reynolds, R; Brodrick, HJ; Russell, JE; Török, ME; Parkhill, J; Peacock, SJ; (2016) A decade of genomic history for healthcare-associated Enterococcus faecium in the United Kingdom and Ireland. Genome research, 26 (10). pp. 1388-1396. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.204024.116

Ravenhall, M; Benavente, ED; Mipando, M; Jensen, AT; Sutherland, CJ; Roper, C; Sepúlveda, N; Kwiatkowski, DP; Montgomery, J; Phiri, KS; +5 more... Terlouw, A; Craig, A; Campino, S; Ocholla, H; Clark, TG; (2016) Characterizing the impact of sustained sulfadoxine/pyrimethamine use upon the Plasmodium falciparum population in Malawi. Malaria journal, 15 (1). p. 575. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1634-6

Refrégier, G; Abadia, E; Matsumoto, T; Ano, H; Takashima, T; Tsuyuguchi, I; Aktas, E; Cömert, F; Gomgnimbou, MK; Panaiotov, S; +6 more... Phelan, J; Coll, F; McNerney, R; Pain, A; Clark, TG; Sola, C; (2016) Turkish and Japanese Mycobacterium tuberculosis sublineages share a remote common ancestor. Infection, genetics and evolution, 45. pp. 461-473. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2016.10.009

Ritchie, Scott C; Watts, Stephen; Fearnley, Liam G; Holt, Kathryn E; Abraham, Gad; Inouye, Michael; (2016) A Scalable Permutation Approach Reveals Replication and Preservation Patterns of Network Modules in Large Datasets. CELL SYSTEMS, 3 (1). pp. 71-82. ISSN 2405-4712 DOI: https://doi.org/10.1016/j.cels.2016.06.012

Roberts, CH; Shaw, HA; Ferguson, N; Holland, M; Wren, BW; Stabler, RA; (2016) Draft Genome Sequence of Robinsoniella peoriensis 6600698, a Confounder of Clostridium difficile Diagnosis. Genome announcements, 4 (6). ISSN 2169-8287 DOI: https://doi.org/10.1128/genomeA.01275-16

Robins-Browne, Roy M; Holt, Kathryn E; Ingle, Danielle J; Hocking, Dianna M; Yang, Ji; Tauschek, Marija; (2016) Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing? FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 6 (NOV). ISSN 2235-2988 DOI: https://doi.org/10.3389/tcimb.2016.00141

Sadlova, J; Myskova, J; Lestinova, T; Votypka, J; Yeo, M; Volf, P; (2016) Leishmania donovani development in Phlebotomus argentipes: comparison of promastigote- and amastigote-initiated infections. Parasitology, 144 (4). pp. 403-410. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182016002067

Santos, JM; Duarte, N; Kehrer, J; Ramesar, J; Avramut, MC; Koster, AJ; Dessens, JT; Frischknecht, F; Chevalley-Maurel, S; Janse, CJ; +2 more... Franke-Fayard, B; Mair, GR; (2016) Maternally supplied S-acyl-transferase is required for crystalloid organelle formation and transmission of the malaria parasite. Proceedings of the National Academy of Sciences of the United States of America, 113 (26). pp. 7183-8. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1522381113

Schultz, Mark B; Duy, Pham Thanh; Nhu, Tran Do Hoan; Wick, Ryan R; Ingle, Danielle J; Hawkey, Jane; Edwards, David J; Kenyon, Johanna J; Nguyen, Phu Huong Lan; Campbell, James I; +6 more... Thwaites, Guy; Nguyen, Thi Khanh Nhu; Hall, Ruth M; Fournier-Level, Alexandre; Baker, Stephen; Holt, Kathryn E; (2016) Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward. MICROBIAL GENOMICS, 2 (3). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000050

Seale, AC; Hutchison, C; Fernandes, S; Kelly, H; Stoesser, N; Turner, P; Hanson, K; Chandler, C; Goodman, C; Stabler, R; +2 more... Lowe, B; Scott, JAG; (2016) Supporting surveillance capacity for antimicrobial resistance - laboratory capacity strengthening for drug resistant infections in low and middle income countries. Technical Report. LSHTM, London, UK. https://researchonline.lshtm.ac.uk/id/eprint/4274453 Full text not available from this repository.

Shender, LA; Lewis, MD; Rejmanek, D; Mazet, JA; (2016) Molecular Diversity of Trypanosoma cruzi Detected in the Vector Triatoma protracta from California, USA. PLoS neglected tropical diseases, 10 (1). e0004291. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004291

Sherling, Emma S; van Ooij, Christiaan; (2016) Host cell remodeling by pathogens: the exomembrane system in Plasmodium-infected erythrocytes. FEMS MICROBIOLOGY REVIEWS, 40 (5). pp. 701-721. ISSN 0168-6445 DOI: https://doi.org/10.1093/femsre/fuw016

Shimizu, C; Eleftherohorinou, H; Wright, VJ; Kim, J; Alphonse, MP; Perry, JC; Cimaz, R; Burgner, D; Dahdah, N; Hoang, LT; +16 more... Khor, CC; Salgado, A; Tremoulet, AH; Davila, S; Kuijpers, TW; Hibberd, ML; Johnson, TA; Takahashi, A; Tsunoda, T; Kubo, M; Tanaka, T; Onouchi, Y; Yeung, RS; Coin, LJ; Levin, M; Burns, JC; (2016) Genetic Variation in the SLC8A1 Calcium Signaling Pathway Is Associated with Susceptibility to Kawasaki Disease and Coronary Artery Abnormalities. Circulation Cardiovascular genetics. ISSN 1942-325X DOI: https://doi.org/10.1161/CIRCGENETICS.116.001533

Sim, S; Hibberd, ML; (2016) Caenorhabditis elegans susceptibility to gut Enterococcus faecalis infection is associated with fat metabolism and epithelial junction integrity. BMC microbiology, 16 (1). p. 6. ISSN 1471-2180 DOI: https://doi.org/10.1186/s12866-016-0624-8

Sim, S; Hibberd, ML; (2016) Genomic approaches for understanding dengue: insights from the virus, vector, and host. Genome Biol, 17 (1). p. 38. ISSN 1474-760X DOI: https://doi.org/10.1186/s13059-016-0907-2

Skipp, Paul JS; Hughes, Chris; McKenna, Therese; Edwards, Richard; Langridge, James; Thomson, Nicholas R; Clarke, Ian N; (2016) Quantitative Proteomics of the Infectious and Replicative Forms of Chlamydia trachomatis. PLOS ONE, 11 (2). ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0149011

Sola, I; Artigas, A; Taylor, MC; Pérez-Areales, FJ; Viayna, E; Clos, MV; Pérez, B; Wright, CW; Kelly, JM; Muñoz-Torrero, D; (2016) Synthesis and biological evaluation of N-cyanoalkyl-, N-aminoalkyl-, and N-guanidinoalkyl-substituted 4-aminoquinoline derivatives as potent, selective, brain permeable antitrypanosomal agents. Bioorganic & medicinal chemistry. ISSN 0968-0896 DOI: https://doi.org/10.1016/j.bmc.2016.08.036

Stensvold, CR; Clark, CG; (2016) Current status of Blastocystis: A personal view. Parasitology international. ISSN 1383-5769 DOI: https://doi.org/10.1016/j.parint.2016.05.015

Stensvold, CR; Clark, CG; (2016) Molecular Identification and Subtype Analysis of Blastocystis. Current protocols in microbiology, 43. 20A.2.1-20A.2.10. ISSN 1934-8525 DOI: https://doi.org/10.1002/cpmc.17

Suarez-Esquivel, M; Ruiz-Villalobos, N; Castillo-Zeledon, A; Jimenez-Rojas, C; Roop, RM; Comerci, DJ; Barquero-Calvo, E; Chacon-Diaz, C; Caswell, CC; Baker, KS; +6 more... Chaves-Olarte, E; Thomson, NR; Moreno, E; Letesson, JJ; de Bolle, X; Guzman-Verri, C; (2016) Brucella abortus Strain 2308 Wisconsin Genome: Importance of the Definition of Reference Strains. Frontiers in microbiology, 7. p. 1557. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2016.01557

Sung, C; Wei, Y; Watanabe, S; Lee, HS; Khoo, YM; Fan, L; Rathore, AP; Chan, KW; Choy, MM; Kamaraj, US; +11 more... Sessions, OM; Aw, P; de Sessions, PF; Lee, B; Connolly, JE; Hibberd, ML; Vijaykrishna, D; Wijaya, L; Ooi, EE; Low, JG; Vasudevan, SG; (2016) Extended Evaluation of Virological, Immunological and Pharmacokinetic Endpoints of CELADEN: A Randomized, Placebo-Controlled Trial of Celgosivir in Dengue Fever Patients. PLoS neglected tropical diseases, 10 (8). e0004851. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004851

Suntornsut, P; Wongsuwan, N; Malasit, M; Kitphati, R; Michie, S; Peacock, SJ; Limmathurotsakul, D; (2016) Barriers and Recommended Interventions to Prevent Melioidosis in Northeast Thailand: A Focus Group Study Using the Behaviour Change Wheel. PLoS neglected tropical diseases, 10 (7). e0004823. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004823

Sutton, PL; Luo, Z; Divis, PC; Friedrich, VK; Conway, DJ; Singh, B; Barnwell, JW; Carlton, JM; Sullivan, SA; (2016) Characterizing the genetic diversity of the monkey malaria parasite Plasmodium cynomolgi. Infection, genetics and evolution, 40. pp. 243-252. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2016.03.009 Full text not available from this repository.

Teixeira da Silva, D; Gundogdu, O; Elmi, A; Wren, WB; Dorrell, N; (2016) The role of the MarR transcriptional regulators RrpA and RrpB in the response of Campylobacter jejuni to oxidative and aerobic stress. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648045 Full text not available from this repository.

The, HC; Thanh, DP; Holt, KE; Thomson, NR; Baker, S; (2016) The genomic signatures of Shigella evolution, adaptation and geographical spread. Nature reviews Microbiology, 14 (4). pp. 235-50. ISSN 1740-1526 DOI: https://doi.org/10.1038/nrmicro.2016.10 Full text not available from this repository.

Thi Khanh Nhu, N; Riordan, DW; Do Hoang Nhu, T; Thanh, DP; Thwaites, G; Huong Lan, NP; Wren, BW; Baker, S; Stabler, RA; (2016) The induction and identification of novel Colistin resistance mutations in Acinetobacter baumannii and their implications. Scientific reports, 6. p. 28291. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep28291

Thomas, JA; Collins, CR; Das, S; Hackett, F; Graindorge, A; Bell, D; Deu, E; Blackman, MJ; (2016) Development and Application of a Simple Plaque Assay for the Human Malaria Parasite Plasmodium falciparum. PloS one, 11 (6). e0157873. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0157873

Thompson, C; (2016) The epidemiology of paediatric diarrhoeal disease and Shigella infections in Ho Chi Minh City, Vietnam. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02572614

Toleman, MS; Reuter, S; Coll, F; Harrison, EM; Blane, B; Brown, NM; Török, ME; Parkhill, J; Peacock, SJ; (2016) Systematic surveillance detects multiple silent introductions and household transmission of methicillin-resistant Staphylococcus aureus USA300 in the east of England. The Journal of infectious diseases. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiw166

Toleman, MS; Reuter, S; Coll, F; Harrison, EM; Peacock, SJ; (2016) Local Persistence of Novel MRSA Lineage after Hospital Ward Outbreak, Cambridge, UK, 2011-2013. Emerging infectious diseases, 22 (9). pp. 1658-9. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2209.151100

Torondel, B; Ensink, JH; Gundogdu, O; Ijaz, UZ; Parkhill, J; Abdelahi, F; Nguyen, VA; Sudgen, S; Gibson, W; Walker, AW; +1 more... Quince, C; (2016) Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines. Microbial biotechnology, 9 (2). pp. 209-23. ISSN 1751-7915 DOI: https://doi.org/10.1111/1751-7915.12334

Tosas Auguet, O; Betley, JR; Stabler, RA; Patel, A; Ioannou, A; Marbach, H; Hearn, P; Aryee, A; Goldenberg, SD; Otter, JA; +7 more... Desai, N; Karadag, T; Grundy, C; Gaunt, MW; Cooper, BS; Edgeworth, JD; Kypraios, T; (2016) Evidence for Community Transmission of Community-Associated but Not Health-Care-Associated Methicillin-Resistant Staphylococcus Aureus Strains Linked to Social and Material Deprivation: Spatial Analysis of Cross-sectional Data. PLoS medicine, 13 (1). e1001944. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1001944

Tungu, P; Messenger, LA; Kirby, MJ; Sudi, W; Kisinza, W; Rowland, M; (2016) Phase III evaluation of the insecticidal efficacy and durability of a deltamethrin-treated polypropylene long-lasting net LifeNet®, in comparison with long-lasting nets made from polyester and polyethylene: study protocol. Archives of public health = Archives belges de sante publique, 74. p. 56. ISSN 0778-7367 DOI: https://doi.org/10.1186/s13690-016-0168-2

Tweedy, J; Spyrou, MA; Pearson, M; Lassner, D; Kuhl, U; Gompels, UA; (2016) Complete Genome Sequence of Germline Chromosomally Integrated Human Herpesvirus 6A and Analyses Integration Sites Define a New Human Endogenous Virus with Potential to Reactivate as an Emerging Infection. Viruses, 8 (1). ISSN 1999-4915 DOI: https://doi.org/10.3390/v8010019

Valiente, E; Bouché, L; Hitchen, P; Faulds-Pain, A; Songane, M; Dawson, LF; Donahue, E; Stabler, RA; Panico, M; Morris, HR; +4 more... Bajaj-Elliott, M; Logan, SM; Dell, A; Wren, BW; (2016) Role of glycosyltransferases modifying type B flagellin of emerging hypervirulent Clostridium difficile lineages and their impact on motility and biofilm formation. The Journal of biological chemistry. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M116.749523

Van Vinh Chau, N; Buu Chau, L; Desquesnes, M; Herder, S; Phu Huong Lan, N; Campbell, JI; Van Cuong, N; Yimming, B; Chalermwong, P; Jittapalapong, S; +16 more... Ramon Franco, J; Tri Tue, N; Rabaa, MA; Carrique-Mas, J; Pham Thi Thanh, T; Tran Vu Thieu, N; Berto, A; Thi Hoa, N; Van Minh Hoang, N; Canh Tu, N; Khac Chuyen, N; Wills, B; Tinh Hien, T; Thwaites, GE; Yacoub, S; Baker, S; (2016) A Clinical and Epidemiological Investigation of the First Reported Human Infection With the Zoonotic Parasite Trypanosoma evansi in Southeast Asia. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciw052

Van Voorhis, WC; Adams, JH; Adelfio, R; Ahyong, V; Akabas, MH; Alano, P; Alday, A; Alemán Resto, Y; Alsibaee, A; Alzualde, A; +177 more... Andrews, KT; Avery, SV; Avery, VM; Ayong, L; Baker, M; Baker, S; Ben Mamoun, C; Bhatia, S; Bickle, Q; Bounaadja, L; Bowling, T; Bosch, J; Boucher, LE; Boyom, FF; Brea, J; Brennan, M; Burton, A; Caffrey, CR; Camarda, G; Carrasquilla, M; Carter, D; Belen Cassera, M; Chih-Chien Cheng, K; Chindaudomsate, W; Chubb, A; Colon, BL; Colón-López, DD; Corbett, Y; Crowther, GJ; Cowan, N; D'Alessandro, S; Le Dang, N; Delves, M; DeRisi, JL; Du, AY; Duffy, S; Abd El-Salam El-Sayed, S; Ferdig, MT; Fernández Robledo, JA; Fidock, DA; Florent, I; Fokou, PV; Galstian, A; Gamo, FJ; Gokool, S; Gold, B; Golub, T; Goldgof, GM; Guha, R; Guiguemde, WA; Gural, N; Guy, RK; Hansen, MA; Hanson, KK; Hemphill, A; Hooft van Huijsduijnen, R; Horii, T; Horrocks, P; Hughes, TB; Huston, C; Igarashi, I; Ingram-Sieber, K; Itoe, MA; Jadhav, A; Naranuntarat Jensen, A; Jensen, LT; Jiang, RH; Kaiser, A; Keiser, J; Ketas, T; Kicka, S; Kim, S; Kirk, K; Kumar, VP; Kyle, DE; Lafuente, MJ; Landfear, S; Lee, N; Lee, S; Lehane, AM; Li, F; Little, D; Liu, L; Llinás, M; Loza, MI; Lubar, A; Lucantoni, L; Lucet, I; Maes, L; Mancama, D; Mansour, NR; March, S; McGowan, S; Medina Vera, I; Meister, S; Mercer, L; Mestres, J; Mfopa, AN; Misra, RN; Moon, S; Moore, JP; Morais Rodrigues da Costa, F; Müller, J; Muriana, A; Nakazawa Hewitt, S; Nare, B; Nathan, C; Narraidoo, N; Nawaratna, S; Ojo, KK; Ortiz, D; Panic, G; Papadatos, G; Parapini, S; Patra, K; Pham, N; Prats, S; Plouffe, DM; Poulsen, SA; Pradhan, A; Quevedo, C; Quinn, RJ; Rice, CA; Abdo Rizk, M; Ruecker, A; St Onge, R; Salgado Ferreira, R; Samra, J; Robinett, NG; Schlecht, U; Schmitt, M; Silva Villela, F; Silvestrini, F; Sinden, R; Smith, DA; Soldati, T; Spitzmüller, A; Stamm, SM; Sullivan, DJ; Sullivan, W; Suresh, S; Suzuki, BM; Suzuki, Y; Swamidass, SJ; Taramelli, D; Tchokouaha, LR; Theron, A; Thomas, D; Tonissen, KF; Townson, S; Tripathi, AK; Trofimov, V; Udenze, KO; Ullah, I; Vallieres, C; Vigil, E; Vinetz, JM; Voong Vinh, P; Vu, H; Watanabe, NA; Weatherby, K; White, PM; Wilks, AF; Winzeler, EA; Wojcik, E; Wree, M; Wu, W; Yokoyama, N; Zollo, PH; Abla, N; Blasco, B; Burrows, J; Laleu, B; Leroy, D; Spangenberg, T; Wells, T; Willis, PA; (2016) Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. PLoS pathogens, 12 (7). e1005763. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1005763

van Ooij, Christiaan; (2016) Combining traditional medicine and modern chemistry to fight malaria. ANNALS OF TRANSLATIONAL MEDICINE, 4 (24). ISSN 2305-5839 DOI: https://doi.org/10.21037/atm.2016.12.39

WWARN Gametocyte Study Group; , COLLABORATORS; Abdulla, S; Achan, J; Adam, I; Alemayehu, BH; Allan, R; Allen, EN; Anvikar, AR; Arinaitwe, E; +151 more... Ashley, EA; Sot, M; Asih, PB; Awab, GR; Barnes, KI; Bassat, Q; de Manhiça, S; Baudin, E; Björkman, A; Bompart, F; Bonnet, M; Borrmann, S; Bousema, T; Carrara, VI; Sot, M; Cenci, F; Tau, S; Checchi, F; Cot, M; Dahal, P; D'Alessandro, U; Deloron, P; Djimde, A; Dondorp, A; Dorsey, G; Doumbo, OK; Drakeley, CJ; Duparc, S; Espie, E; Faiz, A; Falade, CO; Fanello, C; Faye, B; Diop, UC; Filler, S; Fofana, B; Fogg, C; Gansane, A; Faso, B; Gaye, O; Diop, UC; Genton, B; Gething, PW; Gonzalez, R; de Manhiça, S; Grandesso, F; Greenwood, B; Grivoyannis, A; Guerin, PJ; Hamed, K; Hatz, C; Hay, I; Humphreys, GS; Hwang, J; Janssens, B; Frontières, MS; Jima, D; Juma, E; Kachur, SP; Kager, P; Kamya, MR; Kapulu, M; Karema, C; Kayentao, K; Kiechel, JR; Kofoed, PE; Lameyre, V; Lee, SJ; Lell, B; Marsh, K; Mårtensson, A; Massougbodji, A; Mayxay, M; McGready, R; Sot, M; Menan, H; Menendez, C; Meremikwu, M; Mockenhaupt, FP; Moreira, C; Nabasumba, C; Nambozi, M; Ndiaye, JL; Diop, UC; Newton, PN; Ngasala, BE; Nosten, F; Sot, M; Nsanzabana, C; Offianan, AT; Oguike, M; Ogutu, R; Olliaro, P; Omar, A; Osorio, L; Owusu-Agyei, S; Penali, LK; Pene, M; Diop, UC; Peshu, J; Piola, P; Premji, Z; Price, RN; Ramharter, M; Tübingen, U; Rombo, L; Roper, C; Rosenthal, PJ; Sagara, I; Sawa, P; Schallig, HD; Schramm, B; Shekalaghe, SA; Sibley, CH; Sirima, S; Faso, B; Smithuis, F; Diop, UC; Staedke, SG; Stepniewska, K; Sutanto, I; Sutherland, CJ; Swarthout, TD; Frontières, MS; Syafruddin, D; Sylla, K; de Parasitologie-Mycologie Médicale, S; Diop, UC; Talisuna, AO; Taylor, WR; Temu, EA; Kuile, FT; Tinto, H; Dioulasso, B; Faso, B; Dioulasso, B; Faso, B; Tjitra, E; Ursing, J; Valecha, N; van den Broek, I; Frontières, MS; van Herp, M; Frontières, MS; van Vugt, M; Ward, SA; White, NJ; Winstanley, PA; Woodrow, CJ; Yeka, A; Zwang, J; (2016) Gametocyte carriage in uncomplicated Plasmodium falciparum malaria following treatment with artemisinin combination therapy: a systematic review and meta-analysis of individual patient data. BMC medicine, 14 (1). p. 79. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-016-0621-7

Wagner, J; Coupland, P; Browne, HP; Lawley, TD; Francis, SC; Parkhill, J; (2016) Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification. BMC microbiology, 16. p. 274. ISSN 1471-2180 DOI: https://doi.org/10.1186/s12866-016-0891-4

Warhurst, DC; Craig, JC; Raheem, KS; (2016) Influence of LAR and VAR on Para-Aminopyridine Antimalarials Targetting Haematin in Chloroquine-Resistance. PloS one, 11 (8). e0160091. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0160091

Willcocks, SJ; Denman, CC; Atkins, HS; Wren, BW; (2016) Intracellular replication of the well-armed pathogen Burkholderia pseudomallei. Current opinion in microbiology, 29. pp. 94-103. ISSN 1369-5274 DOI: https://doi.org/10.1016/j.mib.2015.11.007

Wong, VK; Baker, S; Connor, TR; Pickard, D; Page, AJ; Dave, J; Murphy, N; Holliman, R; Sefton, A; Millar, M; +75 more... Dyson, ZA; Dougan, G; Holt, KE; International Typhoid Consortium; , COLLABORATORS; Parkhill, J; Feasey, NA; Kingsley, RA; Thomson, NR; Keane, JA; Weill, FX; Le Hello, S; Hawkey, J; Edwards, DJ; Harris, SR; Cain, AK; Hadfield, J; Hart, PJ; Thieu, NT; Klemm, EJ; Breiman, RF; Watson, CH; Edmunds, WJ; Kariuki, S; Gordon, MA; Heyderman, RS; Okoro, C; Jacobs, J; Lunguya, O; Msefula, C; Chabalgoity, JA; Kama, M; Jenkins, K; Dutta, S; Marks, F; Campos, J; Thompson, C; Obaro, S; MacLennan, CA; Dolecek, C; Keddy, KH; Smith, AM; Parry, CM; Karkey, A; Dongol, S; Basnyat, B; Arjyal, A; Mulholland, EK; Campbell, JI; Dufour, M; Bandaranayake, D; Toleafoa, TN; Singh, SP; Hatta, M; Newton, PN; Dance, D; Davong, V; Onsare, RS; Isaia, L; Thwaites, G; Wijedoru, L; Crump, JA; De Pinna, E; Nair, S; Nilles, EJ; Thanh, DP; Turner, P; Soeng, S; Valcanis, M; Powling, J; Dimovski, K; Hogg, G; Farrar, J; Mather, AE; Amos, B; (2016) An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid. Nature communications, 7. p. 12827. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms12827

Wyres, KL; Wick, RR; Gorrie, C; Jenney, A; Follador, R; Thomson, NR; Holt, KE; (2016) Identification of Klebsiella capsule synthesis loci from whole genome data. Microbial genomics, 2 (12). e000102. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000102

Wyres, Kelly L; Holt, Kathryn E; (2016) Klebsiella pneumoniae Population Genomics and Antimicrobial-Resistant Clones. TRENDS IN MICROBIOLOGY, 24 (12). pp. 944-956. ISSN 0966-842X DOI: https://doi.org/10.1016/j.tim.2016.09.007

Wyres, Kelly; Wick, Ryan; Gorrie, Claire; Jenney, Adam; Follador, Rainer; Thomson, Nicholas; Holt, Kathryn; (2016) Identification of Klebsiella capsule synthesis loci from whole genome data. BioRxiv. DOI: https://doi.org/10.1101/071415

Younas, M; Siddiqui, F; Noreen, Z; Bokhari, SS; Gomez-Duarte, OG; Wren, BW; Bokhari, H; (2016) Characterization of enteropathogenic Escherichia coli of clinical origin from the pediatric population in Pakistan. Transactions of the Royal Society of Tropical Medicine and Hygiene, 110 (7). pp. 414-20. ISSN 0035-9203 DOI: https://doi.org/10.1093/trstmh/trw047 Full text not available from this repository.

Yu, X; Wang, G; Chen, S; Wei, G; Shang, Y; Dong, L; Schön, T; Moradigaravand, D; Parkhill, J; Peacock, SJ; +2 more... Köser, CU; Huang, H; (2016) Mycobacterium tuberculosis wild-type and non-wild-type MIC distributions for the novel fluoroquinolone antofloxacin compared with ofloxacin, levofloxacin, and moxifloxacin. Antimicrobial agents and chemotherapy, 60 (9). pp. 5232-7. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00393-16

Zak, DE; Penn-Nicholson, A; Scriba, TJ; Thompson, E; Suliman, S; Amon, LM; Mahomed, H; Erasmus, M; Whatney, W; Hussey, GD; +136 more... Abrahams, D; Kafaar, F; Hawkridge, T; Verver, S; Hughes, EJ; Ota, M; Sutherland, J; Howe, R; Dockrell, HM; Boom, WH; Thiel, B; Ottenhoff, TH; Mayanja-Kizza, H; Crampin, AC; Downing, K; Hatherill, M; Valvo, J; Shankar, S; Parida, SK; Kaufmann, SH; Walzl, G; Aderem, A; Hanekom, WA; ACS and GC6-74 cohort study groups; , COLLABORATORS; Kafaar, F; Workman, L; Mulenga, H; Scriba, T; Ehrlich, R; Abrahams, D; Moyo, S; Gelderbloem, S; Tameris, M; Geldenhuys, H; Hanekom, W; Hussey, G; Ehrlich, R; Verver, S; Geiter, L; Kaufmann, SH; Parida, SK; Golinski, R; Maertzdorf, J; Weiner, J; Jacobson, M; Walzl, G; Black, G; van der Spuy, G; Stanley, K; Kriel, D; Du Plessis, N; Nene, N; Loxton, A; Chegou, N; Suliman, S; Scriba, T; Mahomed, H; Hughes, J; Downing, K; Penn-Nicholson, A; Mulenga, H; Abel, B; Bowmaker, M; Kagina, B; Kwong C, W; Hanekom, W; Ottenhoff, TH; Klein, MR; Haks, MC; Franken, KL; Geluk, A; van Meijgaarden, KE; Joosten, SA; van Baarle, D; Miedema, F; Boom, WH; Thiel, B; Sadoff, J; Sizemore, D; Ramachandran, S; Barker, L; Brennan, M; Weichold, F; Muller, S; Geiter, L; Schoolnik, G; Dolganov, G; Van, T; Mayanja-Kizza, H; Joloba, M; Zalwango, S; Nsereko, M; Okwera, B; Kisingo, H; Dockrell, H; Smith, S; Gorak-Stolinska, P; Hur, YG; Lalor, M; Lee, JS; Crampin, AC; French, N; Ngwira, B; Smith, AB; Watkins, K; Ambrose, L; Simukonda, F; Mvula, H; Chilongo, F; Saul, J; Branson, K; Kassa, D; Abebe, A; Mesele, T; Tegbaru, B; Howe, R; Mihret, A; Aseffa, A; Bekele, Y; Iwnetu, R; Tafesse, M; Yamuah, L; Ota, M; Sutherland, J; Hill, P; Adegbola, R; Corrah, T; Antonio, M; Togun, T; Adetifa, I; Donkor, S; Andersen, P; Rosenkrands, I; Doherty, M; Weldingh, K; (2016) A blood RNA signature for tuberculosis disease risk: a prospective cohort study. Lancet, 387 (10035). pp. 2312-22. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(15)01316-1