Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization.
Megan E
Carey
;
Zoe A
Dyson
;
Silvia
Argimón
;
Louise
Cerdeira
;
Corin
Yeats
;
David
Aanensen
;
Gerald
Mboowa
;
Stephen
Baker
;
Sofonias K
Tessema
;
Anthony M
Smith
;
+2 more...
Iruka N
Okeke
;
Kathryn E
Holt
;
(2023)
Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization.
Open forum infectious diseases, 10 (Suppl ).
S38-S46.
ISSN 2328-8957
DOI: 10.1093/ofid/ofad044
The global response to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic demonstrated the value of timely and open sharing of genomic data with standardized metadata to facilitate monitoring of the emergence and spread of new variants. Here, we make the case for the value of Salmonella Typhi (S. Typhi) genomic data and demonstrate the utility of freely available platforms and services that support the generation, analysis, and visualization of S. Typhi genomic data on the African continent and more broadly by introducing the Africa Centres for Disease Control and Prevention's Pathogen Genomics Initiative, SEQAFRICA, Typhi Pathogenwatch, TyphiNET, and the Global Typhoid Genomics Consortium.
Item Type | Article |
---|---|
Elements ID | 204220 |
Official URL | http://dx.doi.org/10.1093/ofid/ofad044 |
Date Deposited | 05 Jul 2023 20:56 |
ORCID: https://orcid.org/0000-0002-7797-9080
ORCID: https://orcid.org/0000-0002-8887-3492
ORCID: https://orcid.org/0000-0002-4495-2615
ORCID: https://orcid.org/0000-0002-3637-7155
ORCID: https://orcid.org/0000-0002-1694-7587
ORCID: https://orcid.org/0000-0003-3949-2471