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Darton, Thomas C; Meiring, James E; Tonks, Susan; Khan, Md Arifuzzaman; Khanam, Farhana; Shakya, Mila; Thindwa, Deus; Baker, Stephen; Basnyat, Buddha; Clemens, John D; +10 more... Dougan, Gordon; Dolecek, Christiane; Dunstan, Sarah J; Gordon, Melita A; Heyderman, Robert S; Holt, Kathryn E; Pitzer, Virginia E; Qadri, Firdausi; Zaman, K; Pollard, Andrew J; (2017) The STRATAA study protocol: a programme to assess the burden of enteric fever in Bangladesh, Malawi and Nepal using prospective population census, passive surveillance, serological studies and healthcare utilisation surveys. BMJ OPEN, 7 (6). ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2017-016283

Davies, C; Taylor, A; Gundogdu, O; Wren, WB; Elmi, A; Kelly, D; Dorrell, N; (2017) Investigating the biogenesis of Campylobacter jejuni outer membrane vesicle production. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648039 Full text not available from this repository.

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Dheda, K; Gumbo, T; Maartens, G; Dooley, KE; McNerney, R; Murray, M; Furin, J; Nardell, EA; London, L; Lessem, E; +32 more... Theron, G; van Helden, P; Niemann, S; Merker, M; Dowdy, D; Van Rie, A; Siu, GK; Pasipanodya, JG; Rodrigues, C; Clark, TG; Sirgel, FA; Esmail, A; Lin, HH; Atre, SR; Schaaf, HS; Chang, KC; Lange, C; Nahid, P; Udwadia, ZF; Horsburgh, CRJr; Churchyard, GJ; Menzies, D; Hesseling, AC; Nuermberger, E; McIlleron, H; Fennelly, KP; Goemaere, E; Jaramillo, E; Low, M; Jara, CM; Padayatchi, N; Warren, RM; (2017) The epidemiology, pathogenesis, transmission, diagnosis, and management of multidrug-resistant, extensively drug-resistant, and incurable tuberculosis. The lancet Respiratory medicine. ISSN 2213-2600 DOI: https://doi.org/10.1016/S2213-2600(17)30079-6 Full text not available from this repository.

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Diez Benavente, E; Florez de Sessions, P; Moon, RW; Holder, AA; Blackman, MJ; Roper, C; Drakeley, CJ; Pain, A; Sutherland, CJ; Hibberd, ML; +2 more... Campino, S; Clark, TG; (2017) Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. PLoS genetics, 13 (9). e1007008. ISSN 1553-7390 DOI: https://doi.org/10.1371/journal.pgen.1007008

Diez Benavente, E; Ward, Z; Chan, W; Mohareb, FR; Sutherland, CJ; Roper, C; Campino, S; Clark, TG; (2017) Genomic variation in Plasmodium vivax malaria reveals regions under selective pressure. PloS one, 12 (5). e0177134. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0177134

Divis, P; (2017) Population genetic structure and genomic divergence in Plasmodium knowlesi. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04398418

Divis, PC; Lin, LC; Rovie-Ryan, JJ; Kadir, KA; Anderios, F; Hisam, S; Sharma, RS; Singh, B; Conway, DJ; (2017) Three Divergent Subpopulations of the Malaria Parasite Plasmodium knowlesi. Emerging infectious diseases, 23 (4). pp. 616-624. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2304.161738

Do, LAH; Pellet, J; van Doorn, HR; Tran, AT; Nguyen, BH; Tran, TTL; Tran, QH; Vo, QB; Tran Dac, NA; Trinh, HN; +18 more... Nguyen, TTH; Le Binh, BT; Nguyen, HMK; Nguyen, MT; Thai, QT; Vo, TV; Ngo, NQM; Dang, TKH; Cao, NH; Tran, TV; Ho, LV; De Meulder, B; Auffray, C; Hofstra, JJ; Farrar, J; Bryant, JE; de Jong, M; Hibberd, ML; (2017) Host Transcription Profile In Nasal Epithelium And Whole Blood of Hospitalised Children under two years of age with Respiratory Syncytial Virus Infection. The Journal of infectious diseases. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jix519

Dombrowski, JG; Souza, RM; Curry, J; Hinton, L; Silva, NRM; Grignard, L; Gonçalves, LA; Gomes, AR; Epiphanio, S; Drakeley, C; +4 more... Huggett, J; Clark, TG; Campino, S; Marinho, CRF; (2017) G6PD deficiency alleles in a malaria-endemic region in the Western Brazilian Amazon. Malaria journal, 16 (1). p. 253. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-1889-6

Domman, D; Quilici, ML; Dorman, MJ; Njamkepo, E; Mutreja, A; Mather, AE; Delgado, G; Morales-Espinosa, R; Grimont, PAD; Lizárraga-Partida, ML; +10 more... Bouchier, C; Aanensen, DM; Kuri-Morales, P; Tarr, CL; Dougan, G; Parkhill, J; Campos, J; Cravioto, A; Weill, FX; Thomson, NR; (2017) Integrated view of Vibrio cholerae in the Americas. Science (New York, NY), 358 (6364). pp. 789-793. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.aao2136 Full text not available from this repository.

Duffy, CW; Ba, H; Assefa, S; Ahouidi, AD; Deh, YB; Tandia, A; Kirsebom, FC; Kwiatkowski, DP; Conway, DJ; (2017) Population genetic structure and adaptation of malaria parasites on the edge of endemic distribution. Molecular ecology. ISSN 0962-1083 DOI: https://doi.org/10.1111/mec.14066

Dung, TTN; Duy, PT; Sessions, OM; Sangumathi, UK; Phat, VV; Tam, PTT; To, NTN; Phuc, TM; Hong Chau, TT; Chau, NNM; +4 more... Minh, NN; Thwaites, GE; Rabaa, MA; Baker, S; (2017) A universal genome sequencing method for rotavirus A from human fecal samples which identifies segment reassortment and multi-genotype mixed infection. BMC genomics, 18 (1). p. 324. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-017-3714-6

Dyson, ZA; Thanh, DP; Bodhidatta, L; Mason, CJ; Srijan, A; Rabaa, MA; Vinh, PV; Thanh, TH; Thwaites, GE; Baker, S; +1 more... Holt, KE; (2017) Whole Genome Sequence Analysis of Salmonella Typhi Isolated in Thailand before and after the Introduction of a National Immunization Program. PLoS neglected tropical diseases, 11 (1). e0005274. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0005274

di Sario, G; Gundogdu, O; Hussein, M; Wren, WB; Canonico, B; Papa, S; Elmi, A; Dorrell, N; (2017) Investigating Campylobacter jejuni interactions with endoplasmic reticulum in intestinal epithelial cells resulting in induction of the unfolded protein response. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648022 Full text not available from this repository.

Elmi, A; Dorey, A; Watson, E; Jagatia, H; Gundogdu, O; Bajaj-Elliott, M; Wren, WB; Smith, DGE; Dorrell, N; (2017) The bile salt sodium taurocholate induces Campylobacter jejuni outer membrane vesicle production and increases OMV-associated proteolytic activity. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648047 Full text not available from this repository.

Elmi, A; Dorey, A; Watson, E; Jagatia, H; Inglis, NF; Gundogdu, O; Bajaj-Elliott, M; Wren, BW; Smith, DGE; Dorrell, N; (2017) The bile salt sodium taurocholate induces Campylobacter jejuni outer membrane vesicle production and increases OMV-associated proteolytic activity. Cellular microbiology. ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12814

Esson, D; Gupta, S; Bailey, D; Wigley, P; Wedley, A; Mather, AE; Méric, G; Mastroeni, P; Sheppard, SK; Thomson, NR; +4 more... Parkhill, J; Maskell, DJ; Christie, G; Grant, AJ; (2017) Identification and initial characterisation of a protein involved in Campylobacter jejuni cell shape. Microbial pathogenesis. ISSN 0882-4010 DOI: https://doi.org/10.1016/j.micpath.2017.01.042

Fajardo, T; Sung, PY; Celma, CC; Roy, P; (2017) Rotavirus Genomic RNA Complex Forms via Specific RNA-RNA Interactions: Disruption of RNA Complex Inhibits Virus Infectivity. Viruses, 9 (7). ISSN 1999-4915 DOI: https://doi.org/10.3390/v9070167

Fookes, MC; Hadfield, J; Harris, S; Parmar, S; Unemo, M; Jensen, JS; Thomson, NR; (2017) Mycoplasma genitalium: whole genome sequence analysis, recombination and population structure. BMC genomics, 18 (1). p. 993. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-017-4399-6

Fougere, Aurelie; Jackson, Andrew P; Bechtsi, Dafni Paraskevi; Braks, Joanna AM; Annoura, Takeshi; Fonager, Jannik; Spaccapelo, Roberta; Ramesar, Jai; Chevalley-Maurel, Severine; Klop, Onny; +10 more... van der Laan, Annelies MA; Tanke, Hans J; Kocken, Clemens HM; Pasini, Erica M; Khan, Shahid M; Bohme, Ulrike; van Ooij, Christiaan; Otto, Thomas D; Janse, Chris J; Franke-Fayard, Blandine; (2017) Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole (vol 12, e1005917, 2016). PLOS PATHOGENS, 13 (1). ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1006128

Francisco, AF; Jayawardhana, S; Lewis, MD; Taylor, MC; Kelly, JM; (2017) Biological factors that impinge on Chagas disease drug development. Parasitology. pp. 1-10. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182017001469

Furnham, N; (2017) Complementary Sources of Protein Functional Information: The Far Side of GO. In: UNSPECIFIED, (ed.) The Gene Ontology Handbook. Humana Press, pp. 263-274. ISBN 1940-6029 DOI: https://doi.org/10.1007/978-1-4939-3743-1_19

Ganter, M; Goldberg, JM; Dvorin, JD; Paulo, JA; King, JG; Tripathi, AK; Paul, AS; Yang, J; Coppens, I; Jiang, RH; +5 more... Elsworth, B; Baker, DA; Dinglasan, RR; Gygi, SP; Duraisingh, MT; (2017) Plasmodium falciparum CRK4 directs continuous rounds of DNA replication during schizogony. Nature microbiology, 2. p. 17017. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2017.17

Garrine, Marcelino; Mandomando, Inacio; Vubil, Delfino; Nhampossa, Tacilta; Acacio, Sozinho; Li, Shan; Paulson, Joseph N; Almeida, Mathieu; Domman, Daryl; Thomson, Nicholas R; +2 more... Alonso, Pedro; Stine, Oscar Colin; (2017) Minimal genetic change in Vibrio cholerae in Mozambique over time: Multilocus variable number tandem repeat analysis and whole genome sequencing. PLOS NEGLECTED TROPICAL DISEASES, 11 (6). ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0005671

Gentekaki, E; Curtis, BA; Stairs, CW; Klimeš, V; Eliáš, M; Salas-Leiva, DE; Herman, EK; Eme, L; Arias, MC; Henrissat, B; +16 more... Hilliou, F; Klute, MJ; Suga, H; Malik, SB; Pightling, AW; Kolisko, M; Rachubinski, RA; Schlacht, A; Soanes, DM; Tsaousis, AD; Archibald, JM; Ball, SG; Dacks, JB; Clark, CG; van der Giezen, M; Roger, AJ; (2017) Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis. PLoS biology, 15 (9). e2003769. ISSN 1544-9173 DOI: https://doi.org/10.1371/journal.pbio.2003769

Goheen, MM; Campino, S; Cerami, C; (2017) The role of the red blood cell in host defence against falciparum malaria: an expanding repertoire of evolutionary alterations. British journal of haematology. ISSN 0007-1048 DOI: https://doi.org/10.1111/bjh.14886 Full text not available from this repository.

Gomes, AR; Ravenhall, M; Benavente, ED; Talman, A; Sutherland, C; Roper, C; Clark, TG; Campino, S; (2017) Corrigendum to "Genetic diversity of next generation antimalarial targets: A baseline for drug resistance surveillance programmes" [Int. J. Parasitol. Drugs and Drug Resist. 7 (2017) 174-180]. International journal for parasitology Drugs and drug resistance. ISSN 2211-3207 DOI: https://doi.org/10.1016/j.ijpddr.2017.11.001

Gomes, AR; Ravenhall, M; Benavente, ED; Talman, A; Sutherland, C; Roper, C; Clark, TG; Campino, S; (2017) Genetic diversity of next generation antimalarial targets: A baseline for drug resistance surveillance programmes. International journal for parasitology Drugs and drug resistance, 7 (2). pp. 174-180. ISSN 2211-3207 DOI: https://doi.org/10.1016/j.ijpddr.2017.03.001

Gorrie, Claire L; Mirceta, Mirjana; Wick, Ryan R; Edwards, David J; Thomson, Nicholas R; Strugnell, Richard A; Pratt, Nigel F; Garlick, Jill S; Watson, Kerri M; Pilcher, David V; +4 more... McGloughlin, Steve A; Spelman, Denis W; Jenney, Adam WJ; Holt, Kathryn E; (2017) Gastrointestinal Carriage Is a Major Reservoir of Klebsiella pneumoniae Infection in Intensive Care Patients. CLINICAL INFECTIOUS DISEASES, 65 (2). pp. 208-215. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix270

Gorrie, Claire; Mirceta, Mirjana; Wick, Ryan; Judd, Louise; Wyres, Kelly; Thomson, Nicholas; Strugnell, Richard; Pratt, Nigel; Garlick, Jill; Watson, Kerrie; +5 more... Hunter, Peter; McGloughlin, Steve; Spelman, Denis; Jenney, Adam; Holt, Kathryn; (2017) Antimicrobial resistant Klebsiella pneumoniae carriage and infection in specialized geriatric care wards linked to acquisition in the referring hospital. BiorXiv. DOI: https://doi.org/10.1101/218461

Grandjean, L; Gilman, RH; Iwamoto, T; Köser, CU; Coronel, J; Zimic, M; Török, ME; Ayabina, D; Kendall, M; Fraser, C; +5 more... Harris, S; Parkhill, J; Peacock, SJ; Moore, DAJ; Colijn, C; (2017) Convergent evolution and topologically disruptive polymorphisms among multidrug-resistant tuberculosis in Peru. PloS one, 12 (12). e0189838. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0189838

Gundogdu, O; Teixeira da Silva, D; Mohammad, B; Elmi, A; Wren, WB; van Vliet, A; Dorrell, N; (2017) The Campylobacter jejuni oxidative stress regulator RrpB is associated with a genomic hypervariable region and altered oxidative stress resistance. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648056 Full text not available from this repository.

Göhler, A; Trung, TT; Hopf, V; Kohler, C; Hartleib, J; Wuthiekanun, V; Peacock, SJ; Limmathurotsakul, D; Tuanyok, A; Steinmetz, I; (2017) Multitarget Quantitative PCR Improves Detection and Predicts Cultivability of the Pathogen Burkholderia pseudomallei. Applied and environmental microbiology, 83 (8). ISSN 0099-2240 DOI: https://doi.org/10.1128/AEM.03212-16

Hadfield, J; Bénard, A; Domman, D; Thomson, N; (2017) The Hidden Genomics of Chlamydia trachomatis. Current topics in microbiology and immunology. ISSN 0070-217X DOI: https://doi.org/10.1007/82_2017_39 Full text not available from this repository.

Hadfield, J; Harris, SR; Seth-Smith, HMB; Parmar, S; Andersson, P; Giffard, PM; Schachter, J; Moncada, J; Ellison, L; Vaulet, MLG; +28 more... Fermepin, MR; Radebe, F; Mendoza, S; Ouburg, S; Morré, SA; Sachse, K; Puolakkainen, M; Korhonen, SJ; Sonnex, C; Wiggins, R; Jalal, H; Brunelli, T; Casprini, P; Pitt, R; Ison, C; Savicheva, A; Shipitsyna, E; Hadad, R; Kari, L; Burton, MJ; Mabey, D; Solomon, AW; Lewis, D; Marsh, P; Unemo, M; Clarke, IN; Parkhill, J; Thomson, NR; (2017) Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion. Genome research. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.212647.116

Hale, VL; Watermeyer, JM; Hackett, F; Vizcay-Barrena, G; van Ooij, C; Thomas, JA; Spink, MC; Harkiolaki, M; Duke, E; Fleck, RA; +2 more... Blackman, MJ; Saibil, HR; (2017) Parasitophorous vacuole poration precedes its rupture and rapid host erythrocyte cytoskeleton collapse in Plasmodium falciparum egress. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1619441114

Harrison, EM; Coll, F; Toleman, MS; Blane, B; Brown, NM; Török, ME; Parkhill, J; Peacock, SJ; (2017) Genomic surveillance reveals low prevalence of livestock-associated methicillin-resistant Staphylococcus aureus in the East of England. Scientific reports, 7 (1). p. 7406. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-07662-2

Haycock, Philip C; Burgess, Stephen; Nounu, Aayah; Zheng, Jie; Okoli, George N; Bowden, Jack; Wade, Kaitlin Hazel; Timpson, Nicholas J; Evans, David M; Willeit, Peter; +188 more... Aviv, Abraham; Gaunt, Tomr; Hemani, Gibran; Mangino, Massimo; Ellis, Hayley Patricia; Kurian, Kathreena M; Pooley, Karen A; Eeles, Rosalind A; Lee, Jeffrey E; Fang, Shenying; Chen, Wei V; Law, Matthew H; Bowdler, Lisa M; Iles, Mark M; Yang, Qiong; Worrall, Bradford B; Markus, Hugh Stephen; Hung, Rayjean J; Amos, Chris I; Spurdle, Amanda B; Thompson, Deborah J; O'Mara, Tracy A; Wolpin, Brian; Amundadottir, Laufey; Stolzenberg-Solomon, Rachael; Trichopoulou, Antonia; Onland-Moret, Charlotte; Lund, Eiliv; Duell, Eric J; Canzian, Federico; Severi, Gianluca; Overvad, Kim; Gunter, Marc J; Tumino, Rosario; Svenson, Ulrika; van Rij, Andre; Baas, Annette F; Bown, Matthew J; Samani, Nilesh J; van t'Hof, Femke NG; Tromp, Gerard; Jones, Gregory T; Kuivaniemi, Helena; Elmore, James R; Johansson, Mattias; Mckay, James; Scelo, Ghislaine; carreras-Torres, Robert; Gaborieau, Valerie; Brennan, Paul; Bracci, Paige M; Neale, Rachel E; Olson, Sara H; Gallinger, Steven; Li, Donghui; Petersen, Gloria M; Risch, Harvey A; Klein, Alison P; Han, Jiali; Abnet, Christian C; Freedman, Neal D; Taylor, Philip R; Maris, John M; Aben, Katja K; Kiemeney, Lambertus A; Vermeulen, Sita H; Wiencke, John K; Walsh, Kyle M; Wrensch, Margaret; Rice, Terri; Turnbull, Clare; Litchfield, Kevin; Paternoster, Lavinia; Standl, Marie; Abecasis, Goncalo R; SanGiovanni, John Paul; Li, Yong; Mijatovic, Vladan; Sapkota, Yadav; Low, Siew-Kee; Zondervan, Krina T; Montgomery, Grant W; Nyholt, Dale R; van Heel, David A; Hunt, Karen; Arking, Dan E; Ashar, Foram N; Sotoodehnia, Nona; Woo, Daniel; Rosand, Jonathan; Comeau, Mary E; Brown, W Mark; Silverman, Edwin K; Hokanson, John E; Cho, Michael H; Hui, Jennie; Ferreira, Manuel A; Thompson, Philip J; Morrison, Alanna C; Felix, Janine F; Smith, Nicholas L; Christiano, Angela M; Petukhova, Lynn; Betz, Regina C; Fan, Xing; Zhang, Xuejun; Zhu, Caihong; Langefeld, Carl D; Thompson, Susan D; Wang, Feijie; Lin, Xu; Schwartz, David A; Fingerlin, Tasha; Rotter, Jerome I; Cotch, Mary Frances; Jensen, Richard A; Munz, Matthias; Dommisch, Henrik; Schaefer, Arne S; Han, Fang; Ollila, Hanna M; Hillary, Ryan P; Albagha, Omar; Ralston, Stuart H; Zeng, Chenjie; Zheng, Wei; Shu, Xiao-Ou; Reis, Andre; Uebe, Steffen; Hueffmeier, Ulrike; Kawamura, Yoshiya; Otowa, Takeshi; Sasaki, Tsukasa; Hibberd, Martin Lloyd; Davila, Sonia; Xie, Gang; Siminovitch, Katherine; Bei, Jin-Xin; Zeng, Yi-Xin; Foersti, Asta; Chen, Bowang; Landi, Stefano; Franke, Andre; Fischer, Annegret; Ellinghaus, David; Flores, Carlos; Noth, Imre; Ma, Shwu-Fan; Foo, Jia Nee; Liu, Jianjun; Kim, Jong-Won; Cox, David G; Delattre, Olivier; Mirabeau, Olivier; Skibola, Christine F; Tang, Clara S; Garcia-Barcelo, Merce; Chang, Kai-Ping; Su, Wen-Hui; Chang, Yu-Sun; Martin, Nicholas G; Gordon, Scott; Wade, Tracey D; Lee, Chaeyoung; Kubo, Michiaki; Cha, Pei-Chieng; Nakamura, Yusuke; Levy, Daniel; Kimura, Masayuki; Hwang, Shih-Jen; Hunt, Steven; Spector, Tim; Soranzo, Nicole; Manichaikul, Aniw; Barr, Graham; Kahali, Bratati; Speliotes, Elizabeth; Yerges-Armstrong, LauraM; Cheng, Ching-Yu; Jonas, Jost B; Wong, Tien Yin; Fogh, Isabella; Lin, Kuang; Powell, John F; Rice, Kenneth; Relton, Caroline L; Martin, Richard M; Smith, George Davey; (2017) Association Between Telomere Length and Risk of Cancer and Non-Neoplastic Diseases: A Mendelian Randomization Study. JAMA ONCOLOGY, 3 (5). pp. 636-651. ISSN 2374-2437 DOI: https://doi.org/10.1001/jamaoncol.2016.5945

Heinson, AI; Gunawardana, Y; Moesker, B; Hume, CC; Vataga, E; Hall, Y; Stylianou, E; McShane, H; Williams, A; Niranjan, M; +1 more... Woelk, CH; (2017) Enhancing the Biological Relevance of Machine Learning Classifiers for Reverse Vaccinology. International journal of molecular sciences, 18 (2). ISSN 1422-0067 DOI: https://doi.org/10.3390/ijms18020312

Henson, SP; Boinett, CJ; Ellington, MJ; Kagia, N; Mwarumba, S; Nyongesa, S; Mturi, N; Kariuki, S; Scott, JAG; Thomson, NR; +1 more... Morpeth, SC; (2017) Molecular epidemiology of Klebsiella pneumoniae invasive infections over a decade at Kilifi County Hospital in Kenya. International journal of medical microbiology, 307 (7). pp. 422-429. ISSN 1438-4221 DOI: https://doi.org/10.1016/j.ijmm.2017.07.006

Hernandez-Garcia, J; Wang, J; Restif, O; Holmes, MA; Mather, AE; Weinert, LA; Wileman, TM; Thomson, JR; Langford, PR; Wren, BW; +4 more... Rycroft, A; Maskell, DJ; Tucker, AW; BRADP1T Consortium; (2017) Patterns of antimicrobial resistance in Streptococcus suis isolates from pigs with or without streptococcal disease in England between 2009 and 2014. Veterinary microbiology, 207. pp. 117-124. ISSN 0378-1135 DOI: https://doi.org/10.1016/j.vetmic.2017.06.002

Heyckendorf, J; Andres, S; Köser, CU; Olaru, ID; Schön, T; Sturegård, E; Beckert, P; Schleusener, V; Kohl, TA; Hillemann, D; +6 more... Moradigaravand, D; Parkhill, J; Peacock, SJ; Niemann, S; Lange, C; Merker, M; (2017) What is resistance? Impact of phenotypic versus molecular drug resistance testing on multi- and extensively drug-resistant tuberculosis therapy. Antimicrobial agents and chemotherapy. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.01550-17

Holmes, CW; Rahman, S; Allen, DJ; Bandi, S; Tang, JW; (2017) Human parechovirus cluster in the UK, 8 May-2 August 2016-sequence analysis. Journal of clinical virology, 93. pp. 37-39. ISSN 1386-6532 DOI: https://doi.org/10.1016/j.jcv.2017.05.018

Howell, KJ; Weinert, LA; Peters, SE; Wang, J; Hernandez-Garcia, J; Chaudhuri, RR; Luan, SL; Angen, Ø; Aragon, V; Williamson, SM; +6 more... Langford, PR; Rycroft, AN; Wren, BW; Maskell, DJ; Tucker, AW; BRADP1T Consortium; (2017) A "pathotyping" multiplex PCR for Haemophilus parasuis: a tool for the prediction of virulence. Journal of clinical microbiology. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02464-16

Hussein, M; Naz, N; Gundogdu, O; Wren, WB; Elmi, A; Dorrell, N; (2017) Further investigation of the roles of fibronectin-binding proteins CadF and FlpA during Campylobacter jejuni interactions with intestinal epithelial cells. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648029 Full text not available from this repository.

Iguchi, Atsushi; von Mentzer, Astrid; Kikuchi, Taisei; Thomson, Nicholas R; (2017) An untypeable enterotoxigenic Escherichia coli represents one of the dominant types causing human disease. MICROBIAL GENOMICS, 3 (9). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000121

Inns, T; Pulawska-Czub, A; Harris, JP; Vivancos, R; Read, JM; Beeching, NJ; Allen, DJ; Iturriza-Gomara, M; O'Brien, SJ; (2017) Prospective cohort study to investigate the burden and transmission of acute gastroenteritis in care homes: a study protocol. BMJ open, 7 (11). e018867. ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2017-018867

Jamrozy, D; Coll, F; Mather, AE; Harris, SR; Harrison, EM; MacGowan, A; Karas, A; Elston, T; Estée Török, M; Parkhill, J; +1 more... Peacock, SJ; (2017) Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events. BMC genomics, 18 (1). p. 684. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-017-4065-z

Jiang, L; Lee, VJ; Cui, L; Lin, R; Tan, CL; Tan, LW; Lim, WY; Leo, YS; Low, L; Hibberd, M; +1 more... Chen, MI; (2017) Detection of viral respiratory pathogens in mild and severe acute respiratory infections in Singapore. Scientific reports, 7. p. 42963. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep42963

Johnson, R; Byrne, A; Berger, CN; Klemm, E; Crepin, VF; Dougan, G; Frankel, G; (2017) The Type III Secretion System Effector SptP of Salmonella enterica Serovar Typhi. Journal of bacteriology, 199 (4). ISSN 0021-9193 DOI: https://doi.org/10.1128/JB.00647-16

Johnson, R; Ravenhall, M; Pickard, D; Dougan, G; Byrne, A; Frankel, G; (2017) Comparison of Salmonella enterica serovars Typhi and Typhimurium reveals typhoidal-specific responses to bile. Infection and immunity. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00490-17

Jovel, IT; Björkman, A; Roper, C; Mårtensson, A; Ursing, J; (2017) Unexpected selections of Plasmodium falciparum polymorphisms in previously treatment-naïve areas after monthly presumptive administration of three different anti-malarial drugs in Liberia 1976-78. Malaria journal, 16 (1). p. 113. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-1747-6

Kallonen, T; Brodrick, HJ; Harris, SR; Corander, J; Brown, NM; Martin, V; Peacock, SJ; Parkhill, J; (2017) Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. Genome research. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.216606.116

Kanji, A; Hasan, R; Ali, A; Zaver, A; Zhang, Y; Imtiaz, K; Shi, W; Clark, TG; McNerney, R; Phelan, J; +3 more... Rao, S; Shafiq, S; Hasan, Z; (2017) Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan. Tuberculosis (Edinburgh, Scotland), 107 (Supple). pp. 20-30. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2017.07.012 Full text not available from this repository.

Kanji, A; Hasan, R; Ali, A; Zaver, A; Zhang, Y; Imtiaz, K; Shi, W; Clark, TG; McNerney, R; Phelan, J; +3 more... Rao, S; Shafiq, S; Hasan, Z; (2017) Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan. Tuberculosis (Edinburgh, Scotland), 107. pp. 20-30. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2017.07.012

Kazakos, EI; Dorrell, N; Polyzos, SA; Deretzi, G; Kountouras, J; (2017) Comment on "Effect of biofilm formation by clinical isolates of Helicobacter pylori on the efflux-mediated resistance to commonly used antibiotics". World journal of gastroenterology, 23 (33). pp. 6194-6196. ISSN 1007-9327 DOI: https://doi.org/10.3748/wjg.v23.i33.6194

Kelly, C; Gundogdu, O; Pircalabioru, G; Cean, A; Scates, P; Linton, M; Pinkerton, L; Magowan, E; Stef, L; Simiz, E; +6 more... Pet, I; Stewart, S; Stabler, R; Wren, B; Dorrell, N; Corcionivoschi, N; (2017) The In Vitro and In Vivo Effect of Carvacrol in Preventing Campylobacter Infection, Colonization and in Improving Productivity of Chicken Broilers. Foodborne pathogens and disease. ISSN 1535-3141 DOI: https://doi.org/10.1089/fpd.2016.2265

Kim, J; Shimizu, C; Kingsmore, SF; Veeraraghavan, N; Levy, E; Ribeiro Dos Santos, AM; Yang, H; Flatley, J; Hoang, LT; Hibberd, ML; +4 more... Tremoulet, AH; Harismendy, O; Ohno-Machado, L; Burns, JC; (2017) Whole genome sequencing of an African American family highlights toll like receptor 6 variants in Kawasaki disease susceptibility. PloS one, 12 (2). e0170977. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0170977

Knetsch, CW; Kumar, N; Forster, SC; Connor, TR; Browne, HP; Harmanus, C; Sanders, IM; Harris, SR; Turner, L; Morris, T; +13 more... Perry, M; Miyajima, F; Roberts, P; Pirmohamed, M; Songer, JG; Weese, JS; Indra, A; Corver, J; Rupnik, M; Wren, BW; Riley, TV; Kuijper, EJ; Lawley, TD; (2017) Zoonotic transfer of Clostridium difficile harboring antimicrobial resistance between farm animals and humans. Journal of clinical microbiology. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01384-17

Knuepfer, Ellen; Napiorkowska, Marta; van Ooij, Christiaan; Holder, Anthony A; (2017) Generating conditional gene knockouts in Plasmodium - a toolkit to produce stable DiCre recombinase-expressing parasite lines using CRISPR/Cas9. SCIENTIFIC REPORTS, 7 (1). ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-03984-3

Kwambana-Adams, B; Hanson, B; Worwui, A; Agbla, S; Foster-Nyarko, E; Ceesay, F; Ebruke, C; Egere, U; Zhou, Y; Ndukum, M; +5 more... Sodergren, E; Barer, M; Adegbola, R; Weinstock, G; Antonio, M; (2017) Rapid replacement by non-vaccine pneumococcal serotypes may mitigate the impact of the pneumococcal conjugate vaccine on nasopharyngeal bacterial ecology. Scientific reports, 7 (1). p. 8127. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-08717-0

Lacerda, EM; Bowman, EW; Cliff, JM; Kingdon, CC; King, EC; Lee, JS; Clark, TG; Dockrell, HM; Riley, EM; Curran, H; +1 more... Nacul, L; (2017) The UK ME/CFS Biobank for biomedical research on Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) and Multiple Sclerosis. Open J Bioresour, 4. ISSN 2056-5542 DOI: https://doi.org/10.5334/ojb.28

Last, Anna; Pickering, Harry; Roberts, Chrissy; Coll, Francesc; Phelan, Jody; Burr, Sarah; Cassama, Eunice; Nabicassa, Meno; Seth-Smith, Helena; Hadfield, James; +7 more... Cutliffe, Leslie; Clarke, Ian; Mabey, David; Bailey, Robin; Clark, Taane; Thomson, Nick; Holland, Martin; (2017) Population-based analysis of ocular Chlamydia trachomatis in trachoma-endemic West African communities identifies genomic markers of disease severity. BioRxiv. DOI: https://doi.org/10.1101/205336

Leffler, EM; Band, G; Busby, GBJ; Kivinen, K; Le, QS; Clarke, GM; Bojang, KA; Conway, DJ; Jallow, M; Sisay-Joof, F; +31 more... Bougouma, EC; Mangano, VD; Modiano, D; Sirima, SB; Achidi, E; Apinjoh, TO; Marsh, K; Ndila, CM; Peshu, N; Williams, TN; Drakeley, C; Manjurano, A; Reyburn, H; Riley, E; Kachala, D; Molyneux, M; Nyirongo, V; Taylor, T; Thornton, N; Tilley, L; Grimsley, S; Drury, E; Stalker, J; Cornelius, V; Hubbart, C; Jeffreys, AE; Rowlands, K; Rockett, KA; Spencer, CCA; Kwiatkowski, DP; Malaria Genomic Epidemiology Network; (2017) Resistance to malaria through structural variation of red blood cell invasion receptors. Science (New York, NY). ISSN 0036-8075 DOI: https://doi.org/10.1126/science.aam6393

Liaw, J; Hachani, A; Wren, WB; Gundogdu, O; Dorrell, N; (2017) Investigation of the role of Campylobacter jejuni Type VI secretion system in secretion of effectors and interactions with host cells. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648024 Full text not available from this repository.

Louradour, I; Monteiro, CC; Inbar, E; Ghosh, K; Merkhofer, R; Lawyer, P; Paun, A; Smelkinson, M; Secundino, N; Lewis, M; +3 more... Erram, D; Zurek, L; Sacks, D; (2017) The midgut microbiota plays an essential role in sand fly vector competence for Leishmania major. Cellular microbiology, 19 (10). ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12755 Full text not available from this repository.

Low, MSF; Tan, H; Hartman, M; Tam, CC; Hoo, C; Lim, J; Chiow, S; Lee, S; Thng, R; Cai, M; +2 more... Tan, Y; Lock, J; (2017) Parental perceptions of childhood seasonal influenza vaccination in Singapore: A cross-sectional survey. Vaccine. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2017.09.060

Loza, A; Talaga, A; Herbas, G; Canaviri, RJ; Cahuasiri, T; Luck, L; Guibarra, A; Goncalves, R; Pereira, JA; Gomez, SA; +4 more... Picado, A; Messenger, LA; Bern, C; Courtenay, O; (2017) Systemic insecticide treatment of the canine reservoir of Trypanosoma cruzi induces high levels of lethality in Triatoma infestans, a principal vector of Chagas disease. Parasites & vectors, 10 (1). p. 344. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-017-2278-2

Ludden, C; Reuter, S; Judge, K; Gouliouris, T; Blane, B; Coll, F; Naydenova, P; Hunt, M; Tracey, A; Hopkins, KL; +4 more... Brown, NM; Woodford, N; Parkhill, J; Peacock, SJ; (2017) Sharing of carbapenemase-encoding plasmids between Enterobacteriaceae in UK sewage uncovered by MinION sequencing. Microbial genomics, 3 (7). e000114. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000114

Lulla, V; Losada, A; Lecollinet, S; Kerviel, A; Lilin, T; Sailleau, C; Beck, C; Zientara, S; Roy, P; (2017) Protective efficacy of multivalent replication-abortive vaccine strains in horses against African horse sickness virus challenge. Vaccine, 35 (33). pp. 4262-4269. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2017.06.023

Lynch, CA; Pearce, R; Pota, H; Egwang, C; Egwang, T; Bhasin, A; Cox, J; Abeku, TA; Roper, C; (2017) Travel and the emergence of high-level drug resistance in Plasmodium falciparum in southwest Uganda: results from a population-based study. Malaria journal, 16 (1). p. 150. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-1812-1

Macdonald, SE; Gundogdu, O; Dorrell, N; Wren, BW; Blake, D; Stabler, R; (2017) Draft Genome Sequence of Campylobacter jejuni 11168H. The Onderstepoort journal of veterinary research, 5 (5). ISSN 0030-2465 DOI: https://doi.org/10.1128/genomeA.01556-16

Macdonald, SE; Nolan, MJ; Harman, K; Boulton, K; Hume, DA; Tomley, FM; Stabler, RA; Blake, DP; (2017) Effects of Eimeria tenella infection on chicken caecal microbiome diversity, exploring variation associated with severity of pathology. PloS one, 12 (9). e0184890. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0184890

Macedo, JP; Currier, RB; Wirdnam, C; Horn, D; Alsford, S; Rentsch, D; (2017) Ornithine uptake and the modulation of drug sensitivity in Trypanosoma brucei. FASEB journal. ISSN 0892-6638 DOI: https://doi.org/10.1096/fj.201700311R

Madden, R; Hutchison, M; Jordan, K; Pennone, V; Gundogdu, O; Corcionivoschi, N; (2017) Prevalence and persistence of Listeria monocytogenes in premises and products of small food business operators in Northern Ireland. Food control, 87. pp. 70-78. ISSN 0956-7135 DOI: https://doi.org/10.1016/j.foodcont.2017.12.020

Malima, R; Emidi, B; Messenger, LA; Oxborough, RM; Batengana, B; Sudi, W; Weston, S; Mtove, G; Mugasa, JP; Mosha, FW; +2 more... Rowland, MW; Kisinza, W; (2017) Experimental hut evaluation of a novel long-lasting non-pyrethroid durable wall lining for control of pyrethroid-resistant Anopheles gambiae and Anopheles funestus in Tanzania. Malaria journal, 16 (1). p. 82. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-1710-6

Marks, M; Fookes, M; Wagner, J; Butcher, R; Ghinai, R; Sokana, O; Sarkodie, YA; Lukehart, SA; Solomon, AW; Mabey, DCW; +1 more... Thomson, N; (2017) Diagnostics for yaws eradication: insights from direct next generation sequencing of cutaneous strains of Treponema pallidum. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix892

Matsuo, E; Yamazaki, K; Tsuruta, H; Roy, P; (2017) Interaction between a unique minor protein and a major capsid protein of Bluetongue virus controls virus infectivity. Journal of virology. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.01784-17

McKenna, A; Nompilo, S; Richmond, A; Gundogdu, O; Green, BD; Corcionivoschi, N; (2017) Efficient prevention of Campylobacter spp. entrance in broiler houses improves flock performance at slaughter. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/4648023 Full text not available from this repository.

Meeks, KAC; Henneman, P; Venema, A; Burr, T; Galbete, C; Danquah, I; Schulze, MB; Mockenhaupt, FP; Owusu-Dabo, E; Rotimi, CN; +8 more... Addo, J; Smeeth, L; Bahendeka, S; Spranger, J; Mannens, MMAM; Zafarmand, MH; Agyemang, C; Adeyemo, A; (2017) An epigenome-wide association study in whole blood of measures of adiposity among Ghanaians: the RODAM study. Clinical epigenetics, 9. p. 103. ISSN 1868-7075 DOI: https://doi.org/10.1186/s13148-017-0403-x

Mensah-Brown, HE; Abugri, J; Asante, KP; Dwomoh, D; Dosoo, D; Atuguba, F; Conway, DJ; Awandare, GA; (2017) Assessing the impact of differences in malaria transmission intensity on clinical and haematological indices in children with malaria. Malaria journal, 16 (1). p. 96. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-1745-8

Meredith, EL; Kumar, A; Konno, A; Szular, J; Alsford, S; Seifert, K; Horn, D; Wilkinson, SR; (2017) Distinct activation mechanisms trigger the trypanocidal activity of DNA damaging prodrugs. Molecular microbiology. ISSN 0950-382X DOI: https://doi.org/10.1111/mmi.13767

Messenger, LA; Gilman, RH; Verastegui, M; Galdos-Cardenas, G; Sanchez, G; Valencia, E; Sanchez, L; Malaga, E; Rendell, VR; Jois, M; +8 more... Shah, V; Santos, N; Del Carmen Abastoflor, M; LaFuente, C; Colanzi, R; Bozo, R; Bern, C; Working Group on Chagas disease in Bolivia and Peru; (2017) Towards improving early diagnosis of congenital Chagas disease in an endemic setting. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix277

Messenger, LA; Rowland, M; (2017) Insecticide-treated durable wall lining (ITWL): future prospects for control of malaria and other vector-borne diseases. Malaria journal, 16 (1). p. 213. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-1867-z

Messenger, LA; Shililu, J; Irish, SR; Anshebo, GY; Tesfaye, AG; Ye-Ebiyo, Y; Chibsa, S; Dengela, D; Dissanayake, G; Kebede, E; +9 more... Zemene, E; Asale, A; Yohannes, M; Taffese, HS; George, K; Fornadel, C; Seyoum, A; Wirtz, RA; Yewhalaw, D; (2017) Insecticide resistance in Anopheles arabiensis from Ethiopia (2012-2016): a nationwide study for insecticide resistance monitoring. Malaria journal, 16 (1). p. 469. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-017-2115-2

Miari, VF; Solanki, P; Hleba, Y; Stabler, RA; Heap, JT; (2017) In vitro susceptibility to closthioamide among clinical and reference strains of Neisseria gonorrhoeae. Antimicrobial agents and chemotherapy. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00929-17

Mohl, BP; Emmott, E; Roy, P; (2017) Phosphoproteomic analysis reveals the importance of kinase regulation during orbivirus infection. Molecular & cellular proteomics. ISSN 1535-9476 DOI: https://doi.org/10.1074/mcp.M117.067355

Mohl, BP; Roy, P; (2017) Elucidating virus entry using a tetracysteine-tagged virus. Methods (San Diego, Calif). ISSN 1046-2023 DOI: https://doi.org/10.1016/j.ymeth.2017.08.004

Moradigaravand, D; Gouliouris, T; Blane, B; Naydenova, P; Ludden, C; Crawley, C; Brown, NM; Török, ME; Parkhill, J; Peacock, SJ; (2017) Within-host evolution of Enterococcus faecium during longitudinal carriage and transition to bloodstream infection in immunocompromised patients. Genome medicine, 9 (1). p. 119. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-017-0507-0

Moradigaravand, D; Jamrozy, D; Mostowy, R; Anderson, A; Nickerson, EK; Thaipadungpanit, J; Wuthiekanun, V; Limmathurotsakul, D; Tandhavanant, S; Wikraiphat, C; +10 more... Wongsuvan, G; Teerawattanasook, N; Jutrakul, Y; Srisurat, N; Chaimanee, P; Eoin West, T; Blane, B; Parkhill, J; Chantratita, N; Peacock, SJ; (2017) Evolution of the Staphylococcus argenteus ST2250 Clone in Northeastern Thailand Is Linked with the Acquisition of Livestock-Associated Staphylococcal Genes. mBio, 8 (4). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.00802-17

Moradigaravand, D; Martin, V; Peacock, SJ; Parkhill, J; (2017) Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. mBio, 8 (1). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.01976-16

Moradigaravand, Danesh; Martin, Veronique; Peacock, Sharon J; Parkhill, Julian; (2017) Population Structure of Multidrug-Resistant Klebsiella oxytoca within Hospitals across the United Kingdom and Ireland Identifies Sharing of Virulence and Resistance Genes with K-pneumoniae. GENOME BIOLOGY AND EVOLUTION, 9 (3). pp. 574-584. ISSN 1759-6653 DOI: https://doi.org/10.1093/gbe/evx019

Mullineaux-Sanders, C; Collins, JW; Ruano-Gallego, D; Levy, M; Pevsner-Fischer, M; Glegola-Madejska, IT; Sågfors, AM; Wong, JLC; Elinav, E; Crepin, VF; +1 more... Frankel, G; (2017) Citrobacter rodentium Relies on Commensals for Colonization of the Colonic Mucosa. Cell reports, 21 (12). pp. 3381-3389. ISSN 2211-1247 DOI: https://doi.org/10.1016/j.celrep.2017.11.086

Murray, L; (2017) Investigations into the within-host genomic diversity and phenotypic variation of Plasmodium falciparum. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.03928335

Murray, L; Stewart, LB; Tarr, SJ; Ahouidi, AD; Diakite, M; Amambua-Ngwa, A; Conway, DJ; (2017) Multiplication rate variation in the human malaria parasite Plasmodium falciparum. Scientific reports, 7 (1). p. 6436. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-06295-9

Musicha, P; Feasey, NA; Cain, AK; Kallonen, T; Chaguza, C; Peno, C; Khonga, M; Thompson, S; Gray, KJ; Mather, AE; +4 more... Heyderman, RS; Everett, DB; Thomson, NR; Msefula, CL; (2017) Genomic landscape of extended-spectrum β-lactamase resistance in Escherichia coli from an urban African setting. The Journal of antimicrobial chemotherapy. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkx058

Musonda, KG; (2017) Human Cytomegalovirus Transmission in Early Childhood and Impact of Maternal HIV in Zambia: A Molecular Study. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.03615653

Nakatani, Y; Opel-Reading, HK; Merker, M; Machado, D; Andres, S; Kumar, SS; Moradigaravand, D; Coll, F; Perdigão, J; Portugal, I; +19 more... Schön, T; Nair, D; Devi, KRU; Kohl, TA; Beckert, P; Clark, TG; Maphalala, G; Khumalo, D; Diel, R; Klaos, K; Aung, HL; Cook, GM; Parkhill, J; Peacock, SJ; Swaminathan, S; Viveiros, M; Niemann, S; Krause, KL; Köser, CU; (2017) Role of alanine racemase mutations in Mycobacterium tuberculosis D-cycloserine resistance. Antimicrobial agents and chemotherapy. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.01575-17

Okell, LC; Griffin, JT; Roper, C; (2017) Mapping sulphadoxine-pyrimethamine-resistant Plasmodium falciparum malaria in infected humans and in parasite populations in Africa. Scientific reports, 7 (1). p. 7389. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-06708-9

Oshota, O; Conway, M; Fookes, M; Schreiber, F; Chaudhuri, RR; Yu, L; Morgan, FJE; Clare, S; Choudhary, J; Thomson, NR; +4 more... Lio, P; Maskell, DJ; Mastroeni, P; Grant, AJ; (2017) Transcriptome and proteome analysis of Salmonella enterica serovar Typhimurium systemic infection of wild type and immune-deficient mice. PloS one, 12 (8). e0181365. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0181365

Page, Andrew; Wailan, Alexander; Shao, Yan; Judge, Kim; Dougan, Gordon; Klemm, Elizabeth; Thomson, Nicholas; Keane, Jacqueline; (2017) PlasmidTron: assembling the cause of phenotypes from NGS data. BiorXiv. DOI: https://doi.org/10.1101/188920

Patin, EC; Geffken, AC; Willcocks, S; Leschczyk, C; Haas, A; Nimmerjahn, F; Lang, R; Ward, TH; Schaible, UE; (2017) Trehalose dimycolate interferes with FcγR-mediated phagosome maturation through Mincle, SHP-1 and FcγRIIB signalling. PloS one, 12 (4). e0174973. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0174973

Pearson, JS; Giogha, C; Mühlen, S; Nachbur, U; Pham, CL; Zhang, Y; Hildebrand, JM; Oates, CV; Lung, TW; Ingle, D; +13 more... Dagley, LF; Bankovacki, A; Petrie, EJ; Schroeder, GN; Crepin, VF; Frankel, G; Masters, SL; Vince, J; Murphy, JM; Sunde, M; Webb, AI; Silke, J; Hartland, EL; (2017) Erratum: EspL is a bacterial cysteine protease effector that cleaves RHIM proteins to block necroptosis and inflammation. Nature Research. DOI: https://doi.org/10.1038/nmicrobiol.2017.24 Full text not available from this repository.

Pearson, JS; Giogha, C; Mühlen, S; Nachbur, U; Pham, CL; Zhang, Y; Hildebrand, JM; Oates, CV; Lung, TW; Ingle, D; +13 more... Dagley, LF; Bankovacki, A; Petrie, EJ; Schroeder, GN; Crepin, VF; Frankel, G; Masters, SL; Vince, J; Murphy, JM; Sunde, M; Webb, AI; Silke, J; Hartland, EL; (2017) EspL is a bacterial cysteine protease effector that cleaves RHIM proteins to block necroptosis and inflammation. Nature microbiology, 2. p. 16258. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2016.258

Peckham, S; Hann, A; Kendall, S; Gillam, S; (2017) Health promotion and disease prevention in general practice and primary care: a scoping study. Primary health care research & development. pp. 1-12. ISSN 1463-4236 DOI: https://doi.org/10.1017/S1463423617000494

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