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Chandna, Arjun; Mahajan, Raman; Gautam, Priyanka; Mwandigha, Lazaro; Dittrich, Sabine; Kumar, Vikash; Osborn, Jennifer; Kumar, Pragya; Koshiaris, Constantinos; Varghese, George M; +2 more... Lubell, Yoel; Burza, Sakib; (2023) Point-of-care prognostication in moderate Covid-19: Analytical validation and prognostic accuracy of a soluble urokinase plasminogen activator receptor (suPAR) rapid test. PLOS global public health, 3 (8). e0001538. ISSN 2767-3375 DOI: https://doi.org/10.1371/journal.pgph.0001538

Chang, Michelle A; Impoinvil, Daniel; Hamre, Karen ES; Dalexis, Paul-Emile; Mérilien, Jean-Baptiste; Dismer, Amber M; Fouché, Bernadette; Desir, Luccene; Holmes, Kathleen; Lafortune, Willy; +17 more... Herman, Camelia; Rogier, Eric; Noland, Gregory S; Young, Alyssa J; Druetz, Thomas; Ashton, Ruth; Eisele, Thomas P; Cohen, Justin; van den Hoogen, Lotus; Stresman, Gillian; Drakeley, Chris; Pothin, Emilie; Cameron, Ewan; Battle, Katherine E; Williamson, John; Telfort, Marc-Aurèle; Lemoine, Jean Frantz; (2023) Acceptability, Feasibility, Drug Safety, and Effectiveness of a Pilot Mass Drug Administration with a Single Round of Sulfadoxine-Pyrimethamine Plus Primaquine and Indoor Residual Spraying in Communities with Malaria Transmission in Haiti, 2018. The American journal of tropical medicine and hygiene, 108 (6). pp. 1127-1139. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.22-0623

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Cleghorn, Laura AT; Wall, Richard J; Albrecht, Sébastien; MacGowan, Stuart A; Norval, Suzanne; De Rycker, Manu; Woodland, Andrew; Spinks, Daniel; Thompson, Stephen; Patterson, Stephen; +12 more... Corpas Lopez, Victoriano; Dey, Gourav; Collie, Iain T; Hallyburton, Irene; Kime, Robert; Simeons, Frederick RC; Stojanovski, Laste; Frearson, Julie A; Wyatt, Paul G; Read, Kevin D; Gilbert, Ian H; Wyllie, Susan; (2023) Development of a 2,4-Diaminothiazole Series for the Treatment of Human African Trypanosomiasis Highlights the Importance of Static-Cidal Screening of Analogues. Journal of medicinal chemistry, 66 (13). pp. 8896-8916. ISSN 0022-2623 DOI: https://doi.org/10.1021/acs.jmedchem.3c00509

Conroy, Andrea L; Datta, Dibyadyuti; Hoffmann, Angelika; Wassmer, Samuel C; (2023) The brain-kidney-retinal axis in severe falciparum malaria. Trends in parasitology, 39 (6). pp. 412-413. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2023.03.014

Conroy, Andrea L; Datta, Dibyadyuti; Hoffmann, Angelika; Wassmer, Samuel C; (2023) The kidney-brain pathogenic axis in severe falciparum malaria. Trends in parasitology, 39 (3). pp. 191-199. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2023.01.005

Cuypers, Wim L; Meysman, Pieter; Weill, François-Xavier; Hendriksen, Rene S; Beyene, Getenet; Wain, John; Nair, Satheesh; Chattaway, Marie A; Perez-Sepulveda, Blanca M; Ceyssens, Pieter-Jan; +19 more... de Block, Tessa; Lee, Winnie WY; Pardos de la Gandara, Maria; Kornschober, Christian; Moran-Gilad, Jacob; Veldman, Kees T; Cormican, Martin; Torpdahl, Mia; Fields, Patricia I; Černý, Tomáš; Hardy, Liselotte; Tack, Bieke; Mellor, Kate C; Thomson, Nicholas; Dougan, Gordon; Deborggraeve, Stijn; Jacobs, Jan; Laukens, Kris; Van Puyvelde, Sandra; (2023) A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia. Nature communications, 14 (1). p. 3517. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-38902-x

D'Addiego, Jake; Elaldi, Nazif; Wand, Nadina; Osman, Karen; Bagci, Binnur Koksal; Kennedy, Emma; Pektas, Ayse Nur; Hart, Eilish; Slack, Gillian; Hewson, Roger; (2023) Investigating the effect of ribavirin treatment on genetic mutations in Crimean-Congo haemorrhagic fever virus (CCHFV) through next-generation sequencing. Journal of medical virology, 95 (2). e28548-. ISSN 0146-6615 DOI: https://doi.org/10.1002/jmv.28548

Danso, Samuel O; Manu, Alexander; Fenty, Justin; Amanga-Etego, Seeba; Avan, Bilal Iqbal; Newton, Sam; Soremekun, Seyi; Kirkwood, Betty; (2023) Population cause of death estimation using verbal autopsy methods in large-scale field trials of maternal and child health: lessons learned from a 20-year research collaboration in Central Ghana. Emerging themes in epidemiology, 20 (1). 1-. ISSN 1742-7622 DOI: https://doi.org/10.1186/s12982-023-00120-7

Dombrowski, Jamille Gregório; Acford-Palmer, Holly; Campos, Monica; Separovic, Erika Paula Machado; Epiphanio, Sabrina; Clark, Taane Gregory; Campino, Susana; Marinho, Claudio Romero Farias; (2023) Genetic diversity of Plasmodium vivax isolates from pregnant women in the Western Brazilian Amazon: a prospective cohort study. Lancet regional health - Americas, 18. p. 100407. ISSN 2667-193X DOI: https://doi.org/10.1016/j.lana.2022.100407

Eales, Oliver; Page, Andrew J; Tang, Sonja N; Walters, Caroline E; Wang, Haowei; Haw, David; Trotter, Alexander J; Le Viet, Thanh; Foster-Nyarko, Ebenezer; Prosolek, Sophie; +12 more... Atchison, Christina; Ashby, Deborah; Cooke, Graham; Barclay, Wendy; Donnelly, Christl A; O'Grady, Justin; Volz, Erik; The Covid-Genomics Uk Cog-Uk Consortium; Darzi, Ara; Ward, Helen; Elliott, Paul; Riley, Steven; (2023) The use of representative community samples to assess SARS-CoV-2 lineage competition: Alpha outcompetes Beta and wild-type in England from January to March 2021. Microbial genomics, 9 (2). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000887

Eckold, Clare; van Doorn, Cassandra LR; Ruslami, Rovina; Ronacher, Katharina; Riza, Anca-Lelia; van Veen, Suzanne; Lee, Ji-Sook; Kumar, Vinod; Kerry-Barnard, Sarah; Malherbe, Stephanus T; +16 more... Kleynhans, Léanie; Stanley, Kim; Joosten, Simone A; Critchley, Julia A; Hill, Philip C; van Crevel, Reinout; Wijmenga, Cisca; Haks, Mariëlle C; Ioana, Mihai; Alisjahbana, Bachti; Walzl, Gerhard; Ottenhoff, Tom HM; Dockrell, Hazel M; Vianello, Eleonora; Cliff, Jacqueline M; TANDEM Consortium$; (2023) Impaired resolution of blood transcriptomes through tuberculosis treatment with diabetes comorbidity. Clinical and translational medicine, 13 (9). e1375. ISSN 2001-1326 DOI: https://doi.org/10.1002/ctm2.1375

Edwards, RTM; (2023) Development of a gene editing platform for sand fly vectors of Leishmania through CRISPR-Cas9 genetic modification targeting genes associated with olfaction. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671278

El-Mansi, Sammy; Robinson, Christopher L; Kostelnik, Katja B; McCormack, Jessica J; Mitchell, Tom P; Lobato-Márquez, Damián; Rajeeve, Vinothini; Cutillas, Pedro; Cutler, Daniel F; Mostowy, Serge; +1 more... Nightingale, Thomas D; (2023) Proximity proteomics identifies septins and PAK2 as decisive regulators of actomyosin-mediated expulsion of von Willebrand factor. Blood, 141 (8). pp. 930-944. ISSN 0006-4971 DOI: https://doi.org/10.1182/blood.2022017419

Emiru, Tadele; Getachew, Dejene; Murphy, Maxwell; Sedda, Luigi; Ejigu, Legesse Alamerie; Bulto, Mikiyas Gebremichael; Byrne, Isabel; Demisse, Mulugeta; Abdo, Melat; Chali, Wakweya; +23 more... Elliott, Aaron; Vickers, Eric Neubauer; Aranda-Díaz, Andrés; Alemayehu, Lina; Behaksera, Sinknesh W; Jebessa, Gutema; Dinka, Hunduma; Tsegaye, Tizita; Teka, Hiwot; Chibsa, Sheleme; Mumba, Peter; Girma, Samuel; Hwang, Jimee; Yoshimizu, Melissa; Sutcliffe, Alice; Taffese, Hiwot Solomon; Bayissa, Gudissa Aseffa; Zohdy, Sarah; Tongren, Jon Eric; Drakeley, Chris; Greenhouse, Bryan; Bousema, Teun; Tadesse, Fitsum G; (2023) Evidence for a role of Anopheles stephensi in the spread of drug- and diagnosis-resistant malaria in Africa. Nature medicine, 29 (12). pp. 3203-3211. ISSN 1078-8956 DOI: https://doi.org/10.1038/s41591-023-02641-9

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Foster-Nyarko, Ebenezer; Cottingham, Hugh; Wick, Ryan R; Judd, Louise M; Lam, Margaret MC; Wyres, Kelly L; Stanton, Thomas D; Tsang, Kara K; David, Sophia; Aanensen, David M; +2 more... Brisse, Sylvain; Holt, Kathryn E; (2023) Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae. Microbial genomics, 9 (2). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000936

Francisco, Amanda F; Chen, Gong; Wang, Wen; Sykes, Melissa L; Escudié, Fanny; Scandale, Ivan; Olmo, Francisco; Shackleford, David M; Zulfiqar, Bilal; Kratz, Jadel M; +7 more... Pham, Thao; Saunders, Jessica; Hu, Meiyu; Avery, Vicky M; Charman, Susan A; Kelly, John M; Chatelain, Eric; (2023) Preclinical data do not support the use of amiodarone or dronedarone as antiparasitic drugs for Chagas disease at the approved human dosing regimen. Frontiers in tropical diseases, 4. DOI: https://doi.org/10.3389/fitd.2023.1254061

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Fraser, Alice J; Greenland-Bews, Caitlin; Kelly, Daniel; Williams, Christopher T; LSTM Diagnostics Group; CONDOR Steering Group; Body, Richard; Adams, Emily R; Atienzar, Ana Cubas; Edwards, Thomas; +1 more... Allen, David J; (2023) A high-resolution melt curve toolkit to identify lineage-defining SARS-CoV-2 mutations. Scientific reports, 13 (1). 3887-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-30754-1

Fréville, Aline; Ressurreição, Margarida; van Ooij, Christiaan; (2023) Identification of a non-exported Plasmepsin V substrate that functions in the parasitophorous vacuole of malaria parasites. mBio, 15 (1). e0122323-. DOI: https://doi.org/10.1128/mbio.01223-23

Garcia, Klauss Kleydmann Sabino; Soremekun, Seyi; Bottomley, Christian; Abrahão, Amanda Amaral; de Miranda, Cristiano Barreto; Drakeley, Chris; Ramalho, Walter Massa; Siqueira, André M; (2023) Assessing the impact of the "malaria supporters project" intervention to malaria control in the Brazilian Amazon: an interrupted time-series analysis. Malaria Journal, 22 (1). 275-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-023-04706-z

Gomes, Margarida C; Brokatzky, Dominik; Bielecka, Magdalena K; Wardle, Fiona C; Mostowy, Serge; (2023) Shigella induces epigenetic reprogramming of zebrafish neutrophils. Science advances, 9 (36). ISSN 2375-2548 DOI: https://doi.org/10.1126/sciadv.adf9706

González, Silvia; Wall, Richard J; Thomas, John; Braillard, Stephanie; Brunori, Gino; Camino Díaz, Isabel; Cantizani, Juan; Carvalho, Sandra; Castañeda Casado, Pablo; Chatelain, Eric; +20 more... Cotillo, Ignacio; Fiandor, Jose M; Francisco, Amanda Fortes; Grimsditch, David; Keenan, Martine; Kelly, John M; Kessler, Albane; Luise, Chiara; Lyon, Jon J; MacLean, Lorna; Marco, Maria; Martin, J Julio; Martinez Martinez, Maria S; Paterson, Christy; Read, Kevin D; Santos-Villarejo, Angel; Zuccotto, Fabio; Wyllie, Susan; Miles, Tim J; De Rycker, Manu; (2023) Short-course combination treatment for experimental chronic Chagas disease. Science translational medicine, 15 (726). eadg8105-. ISSN 1946-6234 DOI: https://doi.org/10.1126/scitranslmed.adg8105

Gómez González, PJ; (2023) Analysis of Mycobacterium tuberculosis ‘omics data to inform on loci linked to drug resistance, pathogenicity and virulence. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670763

Gómez-González, Paula Josefina; Grabowska, Anna D; Tientcheu, Leopold D; Tsolaki, Anthony G; Hibberd, Martin L; Campino, Susana; Phelan, Jody E; Clark, Taane G; (2023) Functional genetic variation in pe/ppe genes contributes to diversity in Mycobacterium tuberculosis lineages and potential interactions with the human host. Frontiers in microbiology, 14. 1244319-. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2023.1244319

Güler, Gizem Özbaykal; Mostowy, Serge; (2023) The septin cytoskeleton: Heteromer composition defines filament function. The Journal of cell biology, 222 (3). e202302010-. ISSN 0021-9525 DOI: https://doi.org/10.1083/jcb.202302010

Hackman, Jada; Sheppard, Carmen; Phelan, Jody; Jones-Warner, William; Sobkowiak, Ben; Shah, Sonal; Litt, David; Fry, Norman K; Toizumi, Michiko; Yoshida, Lay-Myint; +4 more... Hibberd, Martin; Miller, Elizabeth; Flasche, Stefan; Hué, Stéphane; (2023) Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study. Wellcome open research, 8. 427-. DOI: https://doi.org/10.12688/wellcomeopenres.19219.1

Hamre, Karen ES; Dismer, Amber M; Rogier, Eric; van den Hoogen, Lotus L; Williamson, John; Kishore, Nishant; Travers, Anyess; McGee, Kathleen; Pierre, Baby; Fouché, Bernadette; +8 more... Impoinvil, Daniel; Holmes, Kathleen; Stresman, Gillian; Druetz, Thomas; Eisele, Thomas P; Drakeley, Chris; Lemoine, Jean Frantz; Chang, Michelle A; (2023) Spatial Clustering and Risk Factors for Malaria Infections and Marker of Recent Exposure to Plasmodium falciparum from a Household Survey in Artibonite, Haiti. The American journal of tropical medicine and hygiene, 109 (2). pp. 258-272. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.22-0599

Harrison, Mark A; Farthing, Rebecca J; Allen, Nyasha; Ahern, Lucy M; Birchall, Kristian; Bond, Michael; Kaur, Harparkash; Wren, Brendan W; Bergeron, Julien RC; Dawson, Lisa F; (2023) Identification of novel p-cresol inhibitors that reduce Clostridioides difficile's ability to compete with species of the gut microbiome. Scientific reports, 13 (1). p. 9492. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-32656-8

Hetland, Marit AK; Hawkey, Jane; Bernhoff, Eva; Bakksjø, Ragna-Johanne; Kaspersen, Håkon; Rettedal, Siren I; Sundsfjord, Arnfinn; Holt, Kathryn E; Löhr, Iren H; (2023) Within-patient and global evolutionary dynamics of Klebsiella pneumoniae ST17. Microbial genomics, 9 (5). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.001005

Higgins, MCW; (2023) Developing an RPA-based Molecular Barcoding Tool for Plasmodium Malaria. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670986

Hong, G; (2023) Investigation of Campylobacter jejuni Modulation of Host Defence Mechanisms in Human Intestinal Epithelial Cells. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671312 Item availability may be restricted.

Hong, Geunhye; Davies, Cadi; Omole, Zahra; Liaw, Janie; Grabowska, Anna D; Canonico, Barbara; Corcionivoschi, Nicolae; Wren, Brendan W; Dorrell, Nick; Elmi, Abdi; +1 more... Gundogdu, Ozan; (2023) Campylobacter jejuni Modulates Reactive Oxygen Species Production and NADPH Oxidase 1 Expression in Human Intestinal Epithelial Cells. Cellular microbiology, 2023. pp. 1-14. ISSN 1462-5814 DOI: https://doi.org/10.1155/2023/3286330

Hou, Mimi M; Barrett, Jordan R; Themistocleous, Yrene; Rawlinson, Thomas A; Diouf, Ababacar; Martinez, Francisco J; Nielsen, Carolyn M; Lias, Amelia M; King, Lloyd DW; Edwards, Nick J; +26 more... Greenwood, Nicola M; Kingham, Lucy; Poulton, Ian D; Khozoee, Baktash; Goh, Cyndi; Hodgson, Susanne H; Mac Lochlainn, Dylan J; Salkeld, Jo; Guillotte-Blisnick, Micheline; Huon, Christèle; Mohring, Franziska; Reimer, Jenny M; Chauhan, Virander S; Mukherjee, Paushali; Biswas, Sumi; Taylor, Iona J; Lawrie, Alison M; Cho, Jee-Sun; Nugent, Fay L; Long, Carole A; Moon, Robert W; Miura, Kazutoyo; Silk, Sarah E; Chitnis, Chetan E; Minassian, Angela M; Draper, Simon J; (2023) Vaccination with Plasmodium vivax Duffy-binding protein inhibits parasite growth during controlled human malaria infection. Science translational medicine, 15 (704). eadf1782. ISSN 1946-6234 DOI: https://doi.org/10.1126/scitranslmed.adf1782

Huan, Yang W; Torraca, Vincenzo; Brown, Russell; Fa-Arun, Jidapha; Miles, Sydney L; Oyarzún, Diego A; Mostowy, Serge; Wang, Baojun; (2023) P1 Bacteriophage-Enabled Delivery of CRISPR-Cas9 Antimicrobial Activity Against Shigella flexneri. ACS synthetic biology, 12 (3). pp. 709-721. ISSN 2161-5063 DOI: https://doi.org/10.1021/acssynbio.2c00465

Ibrahim, A; (2023) From genome to function: A genomic investigation into understudied populations of the malaria parasites Plasmodium malariae and P.vivax. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670765

Ibrahim, Amy; Manko, Emilia; Dombrowski, Jamille G; Campos, Mónica; Benavente, Ernest Diez; Nolder, Debbie; Sutherland, Colin J; Nosten, Francois; Fernandez, Diana; Vélez-Tobón, Gabriel; +11 more... Castaño, Alberto Tobón; Aguiar, Anna Caroline C; Pereira, Dhelio Batista; da Silva Santos, Simone; Suarez-Mutis, Martha; Di Santi, Silvia Maria; Regina de Souza Baptista, Andrea; Dantas Machado, Ricardo Luiz; Marinho, Claudio RF; Clark, Taane G; Campino, Susana; (2023) Population-based genomic study of Plasmodium vivax malaria in seven Brazilian states and across South America. Lancet regional health. Americas, 18. 100420-. ISSN 2667-193X DOI: https://doi.org/10.1016/j.lana.2022.100420

Jayawardhana, Shiromani; Ward, Alexander I; Francisco, Amanda F; Lewis, Michael D; Taylor, Martin C; Kelly, John M; Olmo, Francisco; (2023) Benznidazole treatment leads to DNA damage in Trypanosoma cruzi and the persistence of rare widely dispersed non-replicative amastigotes in mice. PLoS Pathogens, 19 (11). e1011627-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1011627

Jiang, Qi; Liu, Hai-Can; Liu, Qing-Yun; Phelan, Jody E; Tao, Feng-Xi; Zhao, Xiu-Qin; Wang, Jian; Glynn, Judith R; Takiff, Howard E; Clark, Taane G; +2 more... Wan, Kang-Lin; Gao, Qian; (2023) The Evolution and Transmission Dynamics of Multidrug-Resistant Tuberculosis in an Isolated High-Plateau Population of Tibet, China. Microbiology spectrum, 11 (2). e0399122-. ISSN 2165-0497 DOI: https://doi.org/10.1128/spectrum.03991-22

Kabongo, Augustin Tshibaka; Acharjee, Rajib; Sakura, Takaya; Bundutidi, Gloria Mavinga; Hartuti, Endah Dwi; Davies, Cadi; Gundogdu, Ozan; Kita, Kiyoshi; Shiba, Tomoo; Inaoka, Daniel Ken; (2023) Biochemical characterization and identification of ferulenol and embelin as potent inhibitors of malate:quinone oxidoreductase from Campylobacter jejuni. Frontiers in Molecular Biosciences, 10. p. 1095026. ISSN 2296-889X DOI: https://doi.org/10.3389/fmolb.2023.1095026

Kagaya, Wataru; Chan, Chim W; Kongere, James; Kanoi, Bernard N; Ngara, Mtakai; Omondi, Protus; Osborne, Ashley; Barbieri, Laura; Kc, Achyut; Minakawa, Noboru; +2 more... Gitaka, Jesse; Kaneko, Akira; (2023) Evaluation of the protective efficacy of Olyset®Plus ceiling net on reducing malaria prevalence in children in Lake Victoria Basin, Kenya: study protocol for a cluster-randomized controlled trial. Trials, 24 (1). 354-. ISSN 1745-6215 DOI: https://doi.org/10.1186/s13063-023-07372-3

Kristan, Mojca; Acford-Palmer, Holly; Campos, Monica Oliveira; Collins, Emma L; Phelan, Jody; Portwood, Natalie M; Pelloquin, Bethanie; Clarke, Sian; Lines, Jo; Clark, Taane G; +3 more... Walker, Thomas; Campino, Susana; Messenger, Louisa A; (2023) Towards environmental detection, quantification, and molecular characterization of Anopheles stephensi and Aedes aegypti from experimental larval breeding sites. Scientific Reports, 13 (1). 2729-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-29657-y

Källander, Karin; Soremekun, Seyi; Strachan, Daniel Ll; Hill, Zelee; Kasteng, Frida; Kertho, Edmound; Nanyonjo, Agnes; Ten Asbroek, Guus; Nakirunda, Maureen; Lumumba, Patrick; +7 more... Ayebale, Godfrey; Bagorogoza, Benson; Vassall, Anna; Meek, Sylvia; Tibenderana, James; Lingam, Raghu; Kirkwood, Betty; (2023) Improving community health worker treatment for malaria, diarrhoea, and pneumonia in Uganda through inSCALE community and mHealth innovations: A cluster randomised controlled trial. PLOS digital health, 2 (6). e0000217-. ISSN 2767-3170 DOI: https://doi.org/10.1371/journal.pdig.0000217

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Libiseller-Egger, Julian; Wang, Linfeng; Deelder, Wouter; Campino, Susana; Clark, Taane G; Phelan, Jody E; (2023) TB-ML-a framework for comparing machine learning approaches to predict drug resistance of Mycobacterium tuberculosis. Bioinformatics advances, 3 (1). vbad040. ISSN 2635-0041 DOI: https://doi.org/10.1093/bioadv/vbad040

Lindesmith, Lisa C; Brewer-Jensen, Paul D; Conrad, Helen; O'Reilly, Kathleen M; Mallory, Michael L; Kelly, Daniel; Williams, Rachel; Edmunds, W John; Allen, David J; Breuer, Judith; +1 more... Baric, Ralph S; (2023) Emergent variant modeling of the serological repertoire to norovirus in young children. Cell Rep Med, 4 (3). 100954-. DOI: https://doi.org/10.1016/j.xcrm.2023.100954

Lobato-Márquez, Damián; Conesa, José Javier; López-Jiménez, Ana Teresa; Divine, Michael E; Pruneda, Jonathan N; Mostowy, Serge; (2023) Interplay between septins and ubiquitin-mediated xenophagy during Shigella entrapment. Autophagy reports, 2 (1). p. 2213541. ISSN 2769-4127 DOI: https://doi.org/10.1080/27694127.2023.2213541

Lobato-Márquez, Damián; Conesa, José Javier; López-Jiménez, Ana Teresa; Divine, Michael E; Pruneda, Jonathan N; Mostowy, Serge; (2023) Septins and K63 ubiquitin chains are present in separate bacterial microdomains during autophagy of entrapped Shigella. Journal of cell science, 136 (7). jcs261139-. ISSN 0021-9533 DOI: https://doi.org/10.1242/jcs.261139

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Madhi, Shabir A; Kwatra, Gaurav; Richardson, Simone I; Koen, Anthonet L; Baillie, Vicky; Cutland, Clare L; Fairlie, Lee; Padayachee, Sherman D; Dheda, Keertan; Barnabas, Shaun L; +27 more... Bhorat, Qasim Ebrahim; Briner, Carmen; Ahmed, Khatija; Aley, Parvinder K; Bhikha, Sutika; Bhorat, AE; Esmail, Aliasgar; Horne, Elizea; Kaldine, Haajira; Mukendi, Christian K; Madzorera, Vimbai Sharon; Manamela, Nelia P; Masilela, Mduduzi; Hermanus, S Tandile; Motlou, Thopisang; Mzindle, Nonkululeko; Oelofse, Suzette; Patel, Faeezah; Rhead, Sarah; Rossouw, Lindie; Taoushanis, Carol; van Eck, Samuel; Lambe, Teresa; Gilbert, Sarah C; Pollard, Andrew J; Moore, Penny L; Izu, Alane; (2023) Durability of ChAdOx1 nCoV-19 (AZD1222) vaccine and hybrid humoral immunity against variants including omicron BA.1 and BA.4 6 months after vaccination (COV005): a post-hoc analysis of a randomised, phase 1b-2a trial. The Lancet Infectious diseases, 23 (3). pp. 295-306. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(22)00596-5

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Malpartida-Cardenas, Kenny; Moser, Nicolas; Ansah, Felix; Pennisi, Ivana; Ahu Prah, Diana; Amoah, Linda Eva; Awandare, Gordon; Hafalla, Julius Clemence R; Cunnington, Aubrey; Baum, Jake; +2 more... Rodriguez-Manzano, Jesus; Georgiou, Pantelis; (2023) Sensitive Detection of Asymptomatic and Symptomatic Malaria with Seven Novel Parasite-Specific LAMP Assays and Translation for Use at Point-of-Care. Microbiology spectrum, 11 (3). e0522222. ISSN 2165-0497 DOI: https://doi.org/10.1128/spectrum.05222-22

Manno, Daniela; Patterson, Catriona; Drammeh, Abdoulie; Tetteh, Kevin; Kroma, Mattu Tehtor; Otieno, Godfrey Tuda; Lawal, Bolarinde Joseph; Soremekun, Seyi; Ayieko, Philip; Gaddah, Auguste; +16 more... Kamara, Abu Bakarr; Baiden, Frank; Afolabi, Muhammed Olanrewaju; Tindanbil, Daniel; Owusu-Kyei, Kwabena; Ishola, David; Deen, Gibrilla Fadlu; Keshinro, Babajide; Njie, Yusupha; Samai, Mohamed; Lowe, Brett; Robinson, Cynthia; Leigh, Bailah; Drakeley, Chris; Greenwood, Brian; Watson-Jones, Deborah; (2023) The Effect of Previous Exposure to Malaria Infection and Clinical Malaria Episodes on the Immune Response to the Two-Dose Ad26.ZEBOV, MVA-BN-Filo Ebola Vaccine Regimen. Vaccines, 11 (8). p. 1317. ISSN 2076-393X DOI: https://doi.org/10.3390/vaccines11081317

Marlais, Tegwen; Bickford-Smith, Jack; Talavera-López, Carlos; Le, Hai; Chowdhury, Fatima; Miles, Michael A; (2023) A comparative 'omics' approach for prediction of candidate Strongyloides stercoralis diagnostic coproantigens. PLoS neglected tropical diseases, 17 (4). e0010777-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0010777

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Mesia Kahunu, Gauthier; Wellmann Thomsen, Sarah; Wellmann Thomsen, Louise; Muhindo Mavoko, Hypolite; Mitashi Mulopo, Patrick; Filtenborg Hocke, Emma; Mandoko Nkoli, Papy; Baraka, Vito; Minja, Daniel TR; Mousa, Andria; +7 more... Roper, Cally; Mbongi Moke, Destin; Mumba Ngoyi, Dieudonné; Mukomena Sompwe, Eric; Muyembe Tanfum, Jean Jacques; Hansson, Helle; Alifrangis, Michael; (2023) Identification of the PfK13 mutations R561H and P441L in the Democratic Republic of Congo. International Journal of Infectious Diseases, 139. pp. 41-49. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2023.11.026

Miles, Sydney L; Torraca, Vincenzo; Dyson, Zoe A; López-Jiménez, Ana Teresa; Foster-Nyarko, Ebenezer; Lobato-Márquez, Damián; Jenkins, Claire; Holt, Kathryn E; Mostowy, Serge; (2023) Acquisition of a large virulence plasmid (pINV) promoted temperature-dependent virulence and global dispersal of O96:H19 enteroinvasive Escherichia coli. mBio, 14 (4). e0088223-. ISSN 2150-7511 DOI: https://doi.org/10.1128/mbio.00882-23

Monir, Md Mamun; Islam, Mohammad Tarequl; Mazumder, Razib; Mondal, Dinesh; Nahar, Kazi Sumaita; Sultana, Marzia; Morita, Masatomo; Ohnishi, Makoto; Huq, Anwar; Watanabe, Haruo; +7 more... Qadri, Firdausi; Rahman, Mustafizur; Thomson, Nicholas; Seed, Kimberley; Colwell, Rita R; Ahmed, Tahmeed; Alam, Munirul; (2023) Genomic attributes of Vibrio cholerae O1 responsible for 2022 massive cholera outbreak in Bangladesh. Nature communications, 14 (1). 1154-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-36687-7

Moss, Sophie; Mańko, Emilia; Vasileva, Hristina; Da Silva, Eunice Teixeira; Goncalves, Adriana; Osborne, Ashley; Phelan, Jody; Rodrigues, Amabelia; Djata, Paulo; D'Alessandro, Umberto; +5 more... Mabey, David; Krishna, Sanjeev; Last, Anna; Clark, Taane G; Campino, Susana; (2023) Population dynamics and drug resistance mutations in Plasmodium falciparum on the Bijagós Archipelago, Guinea-Bissau. Scientific reports, 13 (1). p. 6311. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-33176-1

Motta, Ilaria; Boeree, Martin; Chesov, Dumitru; Dheda, Keertan; Günther, Gunar; Horsburgh, Charles Robert; Kherabi, Yousra; Lange, Christoph; Lienhardt, Christian; McIlleron, Helen M; +9 more... Paton, Nicholas I; Stagg, Helen R; Thwaites, Guy; Udwadia, Zarir; Van Crevel, Reinout; Velásquez, Gustavo E; Wilkinson, Robert J; Guglielmetti, Lorenzo; Study group on Mycobacteria (ESGMYC) of the European Society of; (2023) Recent advances in the treatment of tuberculosis. Clinical Microbiology and Infection. S1198-743X(23)00339. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2023.07.013 Item availability may be restricted.

Muppidi, Pranavi; Wright, Emily; Wassmer, Samuel C; Gupta, Himanshu; (2023) Diagnosis of cerebral malaria: Tools to reduce Plasmodium falciparum associated mortality. Frontiers in cellular and infection microbiology, 13. p. 1090013. ISSN 2235-2988 DOI: https://doi.org/10.3389/fcimb.2023.1090013

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Neves, Vitor CM; Satie Okajima, Luciana; Elbahtety, Eyad; Joseph, Susan; Daly, James; Menon, Athul; Fan, Di; Volkyte, Ayste; Mainas, Giuseppe; Fung, Kathy; +5 more... Dhami, Pawan; Pelegrine, Andre A; Sharpe, Paul; Nibali, Luigi; Ide, Mark; (2023) Repurposing Metformin for periodontal disease management as a form of oral-systemic preventive medicine. Journal of translational medicine, 21 (1). 655-. ISSN 1479-5876 DOI: https://doi.org/10.1186/s12967-023-04456-1

Nguipdop-Djomo, Patrick; Oswald, William E; Halliday, Katherine E; Cook, Sarah; Sturgess, Joanna; Sundaram, Neisha; Warren-Gash, Charlotte; Fine, Paul Em; Glynn, Judith; Allen, Elizabeth; +14 more... Clark, Taane G; Ford, Benjamin; Judd, Alison; Ireland, Georgina; Poh, John; Bonell, Chris; Dawe, Fiona; Rourke, Emma; Diamond, Ian; Ladhani, Shamez N; Langan, Sinéad M; Hargreaves, James; Mangtani, Punam; COVID-19 Schools Infection Survey Study Group; (2023) Risk factors for SARS-CoV-2 infection in primary and secondary school students and staff in England in the 2020/2021 school year: a longitudinal study. International Journal of Infectious Diseases, 128. pp. 230-243. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2022.12.030

Okell, Lucy C; Kwambai, Titus K; Dhabangi, Aggrey; Khairallah, Carole; Nkosi-Gondwe, Thandile; Winskill, Peter; Opoka, Robert; Mousa, Andria; Kühl, Melf-Jakob; Lucas, Tim CD; +8 more... Challenger, Joseph D; Idro, Richard; Weiss, Daniel J; Cairns, Matthew; Ter Kuile, Feiko O; Phiri, Kamija; Robberstad, Bjarne; Mori, Amani Thomas; (2023) Projected health impact of post-discharge malaria chemoprevention among children with severe malarial anaemia in Africa. Nature communications, 14 (1). 402-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-35939-w

Okomo, Uduak A; Darboe, Saffiatou; Bah, Saikou Y; Ayorinde, Abigail; Jarju, Sheikh; Sesay, Abdul Karim; Kebbeh, Ngange; Gai, Abdou; Dibbasey, Tida; Grey-Johnson, Mary; +4 more... Le Doare, Kirsty; Holt, Kathryn E; Lawn, Joy E; Kampmann, Beate; (2023) Maternal colonization and early-onset neonatal bacterial sepsis in the Gambia, West Africa: a genomic analysis of vertical transmission. Clinical microbiology and infection, 29 (3). 386.e1-386.e9. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2022.10.012

Olukosi, Adeola Y; Ajibaye, Olusola; Omoniwa, Omowunmi; Oresanya, Olusola; Oluwagbemiga, Aina O; Ujuju, Chinazo; Ekholuenetale, Michael; Maxwell, Kolawole; Sutherland, Colin J; Tibenderana, James K; +1 more... Beshir, Khalid B; (2023) Baseline prevalence of molecular marker of sulfadoxine/pyrimethamine resistance in Ebonyi and Osun states, Nigeria: amplicon deep sequencing of dhps-540. The Journal of antimicrobial chemotherapy, 78 (3). pp. 788-791. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkad011

Osborne, AA; (2023) A multifaceted investigation of the genomics of malaria, from parasite to host, using next-generation sequencing technologies. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671412

Oulton, TE; (2023) Development and validation of serological assays to evaluate malaria transmission. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670916

Oyibo, Wellington; Latham, Victoria; Oladipo, Oladosu; Ntadom, Godwin; Uhomoibhi, Perpetua; Ogbulafor, Nnenna; Okoronkwo, Chukwu; Okoh, Festus; Mahmoud, Aminu; Shekarau, Emmanuel; +6 more... Oresanya, Olusola; Cherima, Yakubu Joel; Jalingo, Innua; Abba, Bintu; Audu, Mohammed; Conway, David J; (2023) Malaria parasite density and detailed qualitative microscopy enhances large-scale profiling of infection endemicity in Nigeria. Scientific reports, 13 (1). p. 1599. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-27535-1

Pardali, Vasiliki; Giannakopoulou, Erofili; Mpekoulis, George; Tsopela, Vassilina; Panos, Georgios; Taylor, Martin C; Kelly, John M; Vassilaki, Niki; Zoidis, Grigoris; (2023) Novel Lipophilic Hydroxamates Based on Spirocarbocyclic Hydantoin Scaffolds with Potent Antiviral and Trypanocidal Activity. Pharmaceuticals, 16 (7). p. 1046. ISSN 1424-8247 DOI: https://doi.org/10.3390/ph16071046

Passmore, Ian J; Faulds-Pain, Alexandra; Abouelhadid, Sherif; Harrison, Mark A; Hall, Catherine L; Hitchen, Paul; Dell, Anne; Heap, John T; Wren, Brendan W; (2023) A combinatorial DNA assembly approach to biosynthesis of N-linked glycans in E. coli. Glycobiology, 33 (2). pp. 138-149. ISSN 0959-6658 DOI: https://doi.org/10.1093/glycob/cwac082

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Phelan, Jody; Gomez-Gonzalez, Paula Josefina; Andreu, Nuria; Omae, Yosuke; Toyo-Oka, Licht; Yanai, Hideki; Miyahara, Reiko; Nedsuwan, Supalert; de Sessions, Paola Florez; Campino, Susana; +10 more... Sallah, Neneh; Parkhill, Julian; Smittipat, Nat; Palittapongarnpim, Prasit; Mushiroda, Taisei; Kubo, Michiaki; Tokunaga, Katsushi; Mahasirimongkol, Surakameth; Hibberd, Martin L; Clark, Taane G; (2023) Genome-wide host-pathogen analyses reveal genetic interaction points in tuberculosis disease. Nature communications, 14 (1). 549-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-36282-w

Pietersen, Elize; Anderson, Kim; Cox, Helen; Dheda, Keertan; Bian, Aihua; Shepherd, Bryan E; Sterling, Timothy R; Warren, Robin M; van der Heijden, Yuri F; (2023) Variation in missed doses and reasons for discontinuation of anti-tuberculosis drugs during hospital treatment for drug-resistant tuberculosis in South Africa. PloS One, 18 (2). e0281097. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0281097

Pietsch, Emma; Ramaprasad, Abhinay; Bielfeld, Sabrina; Wohlfarter, Yvonne; Maco, Bohumil; Niedermüller, Korbinian; Wilcke, Louisa; Kloehn, Joachim; Keller, Markus A; Soldati-Favre, Dominique; +3 more... Blackman, Michael J; Gilberger, Tim-Wolf; Burda, Paul-Christian; (2023) A patatin-like phospholipase is important for mitochondrial function in malaria parasites. mBio, 14 (6). e0171823. ISSN 2150-7511 DOI: https://doi.org/10.1128/mbio.01718-23

Platon, Lucien; Baker, David A; Ménard, Didier; (2023) Modified Plasmodium falciparum Ring-Stage Survival Assay with ML10 Kinase Inhibitor. Antimicrobial agents and chemotherapy, 67 (5). e0001723. ISSN 0066-4804 DOI: https://doi.org/10.1128/aac.00017-23

Quaye, Emmanuel Kofi; Adjei, Raymond Lovelace; Isawumi, Abiola; Allen, David J; Caporaso, J Gregory; Quaye, Osbourne; (2023) Altered Faecal Microbiota Composition and Structure of Ghanaian Children with Acute Gastroenteritis. International journal of molecular sciences, 24 (4). p. 3607. ISSN 1422-0067 DOI: https://doi.org/10.3390/ijms24043607

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Rodrigues, CMC; MacDonald, L; Ure, R; Smith, A; Cameron, JC; Maiden, MCJ; (2023) Exploiting Real-Time Genomic Surveillance Data To Assess 4CMenB Meningococcal Vaccine Performance in Scotland, 2015 to 2022. mBio, 14 (2). e0049923. ISSN 2150-7511 DOI: https://doi.org/10.1128/mbio.00499-23

Roscoe, RB; (2023) Characterising kinetoplastid pantothenate kinase, a multifunctional enzyme of the CoA biosynthesis pathway. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670994

Saeed, Sadia; Tremp, Annie Z; Dessens, Johannes T; (2023) Plasmodium berghei oocysts possess fatty acid synthesis and scavenging routes. Scientific reports, 13 (1). 12700-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-39708-z

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Spadar, A; (2023) Understanding the genetic diversity, antimicrobial resistance, and virulence of Klebsiella pneumoniae bacteria. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670853

Spadar, Anton; Perdigão, João; Campino, Susana; Clark, Taane G; (2023) Large-scale genomic analysis of global Klebsiella pneumoniae plasmids reveals multiple simultaneous clusters of carbapenem-resistant hypervirulent strains. Genome medicine, 15 (1). 3-. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-023-01153-y

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Sparkes, PC; (2023) Exploring energy metabolism in male and female Plasmodium falciparum gametocytes. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671600

Sung, Po-Yu; Zhou, Yiyang; Kao, C Cheng; Aburigh, Ali A; Routh, Andrew; Roy, Polly; (2023) A multidisciplinary approach to the identification of the protein-RNA connectome in double-stranded RNA virus capsids. Nucleic acids research, 51 (10). pp. 5210-5227. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gkad274

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Tawaraishi, Taisuke; Ochida, Atsuko; Akao, Yuichiro; Itono, Sachiko; Kamaura, Masahiro; Akther, Thamina; Shimada, Mitsuyuki; Canan, Stacie; Chowdhury, Sanjoy; Cao, Yafeng; +21 more... Condroski, Kevin; Engkvist, Ola; Francisco, Amanda; Ghosh, Sunil; Kaki, Rina; Kelly, John M; Kimura, Chiaki; Kogej, Thierry; Nagaoka, Kazuya; Naito, Akira; Pairaudeau, Garry; Radu, Constantin; Roberts, Ieuan; Shum, David; Watanabe, Nao-Aki; Xie, Huanxu; Yonezawa, Shuji; Yoshida, Osamu; Yoshida, Ryu; Mowbray, Charles; Perry, Benjamin; (2023) Collaborative Virtual Screening Identifies a 2-Aryl-4-aminoquinazoline Series with Efficacy in an In Vivo Model of Trypanosoma cruzi Infection. Journal of medicinal chemistry, 66 (2). pp. 1221-1238. ISSN 0022-2623 DOI: https://doi.org/10.1021/acs.jmedchem.2c00775

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Torraca, Vincenzo; Bielecka, Magdalena K; Gomes, Margarida C; Brokatzky, Dominik; Busch-Nentwich, Elisabeth M; Mostowy, Serge; (2023) Zebrafish null mutants of Sept6 and Sept15 are viable but more susceptible to Shigella infection. Cytoskeleton, 80 (7-8). pp. 266-274. ISSN 1949-3584 DOI: https://doi.org/10.1002/cm.21750

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Tunstall, T; (2023) Using Machine Learning to Anticipate Antimicrobial Resistance in Mycobacterium Tuberculosis. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670981

Turkiewicz, Anna; Manko, Emilia; Oresegun, Damiola R; Nolder, Debbie; Spadar, Anton; Sutherland, Colin J; Cox-Singh, Janet; Moon, Robert W; Lau, Yee-Ling; Campino, Susana; +1 more... Clark, Taane G; (2023) Population genetic analysis of Plasmodium knowlesi reveals differential selection and exchange events between Borneo and Peninsular sub-populations. Scientific reports, 13 (1). 2142-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-29368-4

Vallintine, Tansy; van Ooij, Christiaan; (2023) Distribution of malaria parasite-derived phosphatidylcholine in the infected erythrocyte. mSphere, 8 (5). e0013123. ISSN 2379-5042 DOI: https://doi.org/10.1128/msphere.00131-23

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Ward, D; (2023) Zika virus surveillance in human and mosquito populations in Cabo Verde – exploring molecular and serological tools for the surveillance of emerging infectious diseases. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670855

Ward, Kurt E; Christensen, Peter; Racklyeft, Annie; Dhingra, Satish K; Chua, Adeline CY; Remmert, Caroline; Suwanarusk, Rossarin; Matheson, Jessica; Blackman, Michael J; Kaneko, Osamu; +8 more... Kyle, Dennis E; Lee, Marcus CS; Moon, Robert W; Snounou, Georges; Rénia, Laurent; Fidock, David A; Russell, Bruce; Bifani, Pablo; (2023) Integrative Genetic Manipulation of Plasmodium cynomolgi Reveals Multidrug Resistance-1 Y976F Associated With Increased In Vitro Susceptibility to Mefloquine. The Journal of infectious diseases, 227 (10). pp. 1121-1126. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiac469

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