Items where Faculty or Department is "Faculty of Infectious and Tropical Diseases > Department of Infection Biology"
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Number of items: 145.
A
Adegbola, Adebanjo J;
Ijarotimi, Omotade A;
Ubom, Akaninyene E;
Adesoji, Bukola A;
Babalola, Olajide E;
Hocke, Emma F;
Hansson, Helle;
Mousa, Andria;
Bolaji, Oluseye O;
Alifrangis, Michael;
+1 more...
Roper, Cally;
(2023)
A snapshot of the prevalence of dihydropteroate synthase-431V mutation and other sulfadoxine-pyrimethamine resistance markers in Plasmodium falciparum isolates in Nigeria.
Malaria Journal, 22 (1).
71-.
ISSN 1475-2875
DOI: https://doi.org/10.1186/s12936-023-04487-5
Alruwaili, Muharib;
Elahi, Rubayet;
van Schalkwyk, Donelly;
Sutherland, Colin;
Shapiro, Theresa;
Prigge, Sean;
Sullivan, David;
(2023)
Creating and Validating Ligase Primers to Detect Single Nucleotide Polymorphisms Associated with Atovaquone Resistance in Plasmodium falciparum.
The American journal of tropical medicine and hygiene, 108 (4).
pp. 777-782.
ISSN 0002-9637
DOI: https://doi.org/10.4269/ajtmh.22-0700
Amambua-Ngwa, Alfred;
Button-Simons, Katrina A;
Li, Xue;
Kumar, Sudhir;
Brenneman, Katelyn Vendrely;
Ferrari, Marco;
Checkley, Lisa A;
Haile, Meseret T;
Shoue, Douglas A;
McDew-White, Marina;
+18 more...
Tindall, Sarah M;
Reyes, Ann;
Delgado, Elizabeth;
Dalhoff, Haley;
Larbalestier, James K;
Amato, Roberto;
Pearson, Richard D;
Taylor, Alexander B;
Nosten, François H;
D'Alessandro, Umberto;
Kwiatkowski, Dominic;
Cheeseman, Ian H;
Kappe, Stefan HI;
Avery, Simon V;
Conway, David J;
Vaughan, Ashley M;
Ferdig, Michael T;
Anderson, Timothy JC;
(2023)
Chloroquine resistance evolution in Plasmodium falciparum is mediated by the putative amino acid transporter AAT1.
Nature microbiology, 8 (7).
pp. 1213-1226.
ISSN 2058-5276
DOI: https://doi.org/10.1038/s41564-023-01377-z
Ambikan, Anoop T;
Elaldi, Nazif;
Svensson-Akusjärvi, Sara;
Bagci, Binnur;
Pektas, Ayse Nur;
Hewson, Roger;
Bagci, Gokhan;
Arasli, Mehmet;
Appelberg, Sofia;
Mardinoglu, Adil;
+7 more...
Sood, Vikas;
Végvári, Ákos;
Benfeitas, Rui;
Gupta, Soham;
Cetin, Ilhan;
Mirazimi, Ali;
Neogi, Ujjwal;
(2023)
Systems-level temporal immune-metabolic profile in Crimean-Congo hemorrhagic fever virus infection.
Proceedings of the National Academy of Sciences of the United States of America, 120 (37).
e2304722120-.
ISSN 0027-8424
DOI: https://doi.org/10.1073/pnas.2304722120
Ameer, Aqsa;
Cheng, Youqi;
Saleem, Farrukh;
Uzma;
McKenna, Aaron;
Richmond, Anne;
Gundogdu, Ozan;
Sloan, William T;
Javed, Sundus;
Ijaz, Umer Zeeshan;
(2023)
Temporal stability and community assembly mechanisms in healthy broiler cecum.
Frontiers in microbiology, 14.
1197838-.
ISSN 1664-302X
DOI: https://doi.org/10.3389/fmicb.2023.1197838
Arashiro, Takeshi;
Arima, Yuzo;
Kuramochi, Jin;
Muraoka, Hirokazu;
Sato, Akihiro;
Chubachi, Kumi;
Oba, Kunihiro;
Yanai, Atsushi;
Arioka, Hiroko;
Uehara, Yuki;
+18 more...
Ihara, Genei;
Kato, Yasuyuki;
Yanagisawa, Naoki;
Nagura, Yoshito;
Yanai, Hideki;
Ueda, Akihiro;
Numata, Akira;
Kato, Hideaki;
Oka, Hideaki;
Nishida, Yusuke;
Ooki, Takao;
Nidaira, Yuki;
Stucky, Ashley;
Suzuki, Tadaki;
Smith, Chris;
Hibberd, Martin;
Ariyoshi, Koya;
Suzuki, Motoi;
(2023)
Letter to the editor: Importance of considering high-risk behaviours in COVID-19 vaccine effectiveness estimates with observational studies.
Eurosurveillance, 28 (4).
pp. 1-2.
ISSN 1560-7917
DOI: https://doi.org/10.2807/1560-7917.ES.2023.28.4.2300034
Arashiro, Takeshi;
Miwa, Maki;
Nakagawa, Hidenori;
Takamatsu, Junpei;
Oba, Kunihiro;
Fujimi, Satoshi;
Kikuchi, Hitoshi;
Iwasawa, Takamasa;
Kanbe, Fumiko;
Oyama, Keisuke;
+51 more...
Kanai, Masayuki;
Ogata, Yoshitaka;
Asakura, Takanori;
Asami, Takahiro;
Mizuno, Keiko;
Sugita, Manabu;
Jinta, Torahiko;
Nishida, Yusuke;
Kato, Hideaki;
Atagi, Kazuaki;
Higaki, Taiki;
Nakano, Yoshio;
Tsutsumi, Takeya;
Doi, Kent;
Okugawa, Shu;
Ueda, Akihiro;
Nakamura, Akira;
Yoshida, Toru;
Shimada-Sammori, Kaoru;
Shimizu, Keiki;
Fujita, Yasuo;
Okochi, Yasumi;
Tochitani, Kentaro;
Nakanishi, Asuka;
Rinka, Hiroshi;
Taniyama, Daisuke;
Yamaguchi, Asase;
Uchikura, Toshio;
Matsunaga, Maiko;
Aono, Hiromi;
Hamaguchi, Masanari;
Motoda, Kentaro;
Nakayama, Sohei;
Yamamoto, Kei;
Oka, Hideaki;
Tanaka, Katsushi;
Inoue, Takeshi;
Kobayashi, Mieko;
Fujitani, Shigeki;
Tsukahara, Maki;
Takeda, Saki;
Stucky, Ashley;
Suzuki, Tadaki;
Smith, Chris;
Hibberd, Martin;
Ariyoshi, Koya;
Fujino, Yuji;
Arima, Yuzo;
Takeda, Shinhiro;
Hashimoto, Satoru;
Suzuki, Motoi;
(2023)
COVID-19 vaccine effectiveness against severe COVID-19 requiring oxygen therapy, invasive mechanical ventilation, and death in Japan: A multicenter case-control study (MOTIVATE study).
Vaccine, 42 (3).
pp. 677-688.
ISSN 0264-410X
DOI: https://doi.org/10.1016/j.vaccine.2023.12.033
Ashall, James;
Shah, Sonal;
Biggs, Joseph R;
Chang, Jui-Ning R;
Jafari, Yalda;
Brady, Oliver J;
Mai, Huynh Kim;
Lien, Le Thuy;
Do Thai, Hung;
Nguyen, Hien Anh Thi;
+11 more...
Anh, Dang Duc;
Iwasaki, Chihiro;
Kitamura, Noriko;
Van Loock, Marnix;
Herrera-Taracena, Guillermo;
Rasschaert, Freya;
Van Wesenbeeck, Liesbeth;
Yoshida, Lay-Myint;
Hafalla, Julius Clemence R;
Hue, Stephane;
Hibberd, Martin L;
(2023)
A phylogenetic study of dengue virus in urban Vietnam shows long-term persistence of endemic strains.
Virus evolution, 9 (1).
vead012-.
ISSN 2057-1577
DOI: https://doi.org/10.1093/ve/vead012
Aziz, Israr;
Noreen, Zobia;
Ijaz, Umer Zeeshan;
Gundogdu, Ozan;
Hamid, Muhammad Haroon;
Muhammad, Nazir;
Khan, Abdullah;
Bokhari, Habib;
(2023)
A prospective study on linking diarrheagenic E. coli with stunted childhood growth in relation to gut microbiome.
Scientific reports, 13 (1).
6802-.
ISSN 2045-2322
DOI: https://doi.org/10.1038/s41598-023-32491-x
B
Basilico, Nicoletta;
Parapini, Silvia;
D'Alessandro, Sarah;
Misiano, Paola;
Romeo, Sergio;
Dondio, Giulio;
Yardley, Vanessa;
Vivas, Livia;
Nasser, Shereen;
Rénia, Laurent;
+5 more...
Russell, Bruce M;
Suwanarusk, Rossarin;
Nosten, François;
Sparatore, Anna;
Taramelli, Donatella;
(2023)
Favorable Preclinical Pharmacological Profile of a Novel Antimalarial Pyrrolizidinylmethyl Derivative of 4-amino-7-chloroquinoline with Potent In Vitro and In Vivo Activities.
Biomolecules, 13 (5).
p. 836.
ISSN 2218-273X
DOI: https://doi.org/10.3390/biom13050836
Batura, Neha;
Roy, Reetabrata;
Aziz, Sarmad;
Sharma, Kamalkant;
Kumar, Divya;
Verma, Deepali;
Correa Ossa, Ana;
Spinola, Paula;
Soremekun, Seyi;
Sikander, Siham;
+7 more...
Zafar, Shamsa;
Divan, Gauri;
Hill, Zelee;
Avan, Bilal Iqbal;
Rahman, Atif;
Kirkwood, Betty;
Skordis, Jolene;
(2023)
Maternal time investment in caregiving activities to promote early childhood development: evidence from rural India.
Frontiers in pediatrics, 11.
1120253-.
ISSN 2296-2360
DOI: https://doi.org/10.3389/fped.2023.1120253
Beshir, Khalid B;
Muwanguzi, Julian;
Nader, Johanna;
Mansukhani, Raoul;
Traore, Aliou;
Gamougam, Kadidja;
Ceesay, Sainey;
Bazie, Thomas;
Kolie, Fassou;
Lamine, Mahaman M;
+23 more...
Cairns, Matt;
Snell, Paul;
Scott, Susana;
Diallo, Abdoulaye;
Merle, Corinne S;
NDiaye, Jean Louis;
Razafindralambo, Lanto;
Moroso, Diego;
Ouedraogo, Jean-Bosco;
Zongo, Issaka;
Kessely, Hamit;
Doumagoum, Daugla;
Bojang, Kalifa;
Ceesay, Serign;
Loua, Kovana;
Maiga, Hamma;
Dicko, Alassane;
Sagara, Issaka;
Laminou, Ibrahim M;
Ogboi, Sonny Johnbull;
Eloike, Tony;
Milligan, Paul;
Sutherland, Colin J;
(2023)
Prevalence of Plasmodium falciparum haplotypes associated with resistance to sulfadoxine-pyrimethamine and amodiaquine before and after upscaling of seasonal malaria chemoprevention in seven African countries: a genomic surveillance study.
The Lancet Infectious diseases, 23 (3).
pp. 361-370.
ISSN 1473-3099
DOI: https://doi.org/10.1016/S1473-3099(22)00593-X
Bhate, Ketaki;
Mansfield, Kathryn E;
Sinnott, Sarah-Jo;
Margolis, David J;
Adesanya, Elizabeth;
Francis, Nick;
Leyrat, Clemence;
Hopkins, Susan;
Stabler, Richard;
Shallcross, Laura;
+2 more...
Langan, Sinéad M;
Mathur, Rohini;
(2023)
Long-term oral antibiotic use in people with acne vulgaris in UK primary care: a drug utilization study.
The British journal of dermatology, 188 (3).
pp. 361-371.
ISSN 0007-0963
DOI: https://doi.org/10.1093/bjd/ljac084
Billows, Nina;
Phelan, Jody E;
Xia, Dong;
Peng, Yonghong;
Clark, Taane G;
Chang, Yu-Mei;
(2023)
Feature weighted models to address lineage dependency in drug-resistance prediction from Mycobacterium tuberculosis genome sequences.
Bioinformatics, 39 (7).
btad428-.
ISSN 1367-4803
DOI: https://doi.org/10.1093/bioinformatics/btad428
Braillard, Stéphanie;
Keenan, Martine;
Breese, Karen J;
Heppell, Jacob;
Abbott, Michael;
Islam, Rafiqul;
Shackleford, David M;
Katneni, Kasiram;
Crighton, Elly;
Chen, Gong;
+28 more...
Patil, Rahul;
Lee, Given;
White, Karen L;
Carvalho, Sandra;
Wall, Richard J;
Chemi, Giulia;
Zuccotto, Fabio;
González, Silvia;
Marco, Maria;
Deakyne, Julianna;
Standing, David;
Brunori, Gino;
Lyon, Jonathan J;
Castañeda-Casado, Pablo;
Camino, Isabel;
Martinez Martinez, Maria S;
Zulfiqar, Bilal;
Avery, Vicky M;
Feijens, Pim-Bart;
Van Pelt, Natascha;
Matheeussen, An;
Hendrickx, Sarah;
Maes, Louis;
Caljon, Guy;
Yardley, Vanessa;
Wyllie, Susan;
Charman, Susan A;
Chatelain, Eric;
(2023)
DNDI-6174 is a preclinical candidate for visceral leishmaniasis that targets the cytochrome bc1.
Science translational medicine, 15 (726).
eadh9902-.
ISSN 1946-6234
DOI: https://doi.org/10.1126/scitranslmed.adh9902
Broger, Tobias;
Koeppel, Lisa;
Huerga, Helena;
Miller, Poppy;
Gupta-Wright, Ankur;
Blanc, François-Xavier;
Esmail, Aliasgar;
Reeve, Byron WP;
Floridia, Marco;
Kerkhoff, Andrew D;
+21 more...
Ciccacci, Fausto;
Kasaro, Margaret P;
Thit, Swe Swe;
Bastard, Mathieu;
Ferlazzo, Gabriella;
Yoon, Christina;
Van Hoving, Daniël J;
Sossen, Bianca;
García, Juan Ignacio;
Cummings, Matthew J;
Wake, Rachel M;
Hanson, Josh;
Cattamanchi, Adithya;
Meintjes, Graeme;
Maartens, Gary;
Wood, Robin;
Theron, Grant;
Dheda, Keertan;
Olaru, Ioana Diana;
Denkinger, Claudia M;
TBYield Study Consortium;
(2023)
Diagnostic yield of urine lipoarabinomannan and sputum tuberculosis tests in people living with HIV: a systematic review and meta-analysis of individual participant data.
The Lancet Global health, 11 (6).
e903-e916.
ISSN 2214-109X
DOI: https://doi.org/10.1016/S2214-109X(23)00135-3
Burns, K;
(2023)
Development of a Glycoconjugate Vaccine Against Group A Streptococcus (GAS).
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04670758
Butkeviciute, E;
(2023)
Studies on innate immune responses to Mycobacterium bovis BCG.
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04670893
Byrne, Isabel;
Dumont, Elin;
Nelli, Luca;
Stresman, Gillian;
Drakeley, Chris;
(2023)
Sero-epidemiology to support decision-making for malaria elimination.
In: American Society for Tropical Medicine and Hygiene: TropMed 2022, 17-22 November 2022, Seattle, United States.
DOI: https://doi.org/10.17037/PUBS.04669054
C
Carey, Megan E;
Dyson, Zoe A;
Argimón, Silvia;
Cerdeira, Louise;
Yeats, Corin;
Aanensen, David;
Mboowa, Gerald;
Baker, Stephen;
Tessema, Sofonias K;
Smith, Anthony M;
+2 more...
Okeke, Iruka N;
Holt, Kathryn E;
(2023)
Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization.
Open forum infectious diseases, 10 (Suppl ).
S38-S46.
ISSN 2328-8957
DOI: https://doi.org/10.1093/ofid/ofad044
Carey, Megan E;
Dyson, Zoe A;
Ingle, Danielle J;
Amir, Afreenish;
Aworh, Mabel K;
Chattaway, Marie Anne;
Chew, Ka Lip;
Crump, John A;
Feasey, Nicholas A;
Howden, Benjamin P;
+105 more...
Keddy, Karen H;
Maes, Mailis;
Parry, Christopher M;
Van Puyvelde, Sandra;
Webb, Hattie E;
Afolayan, Ayorinde Oluwatobiloba;
Alexander, Anna P;
Anandan, Shalini;
Andrews, Jason R;
Ashton, Philip M;
Basnyat, Buddha;
Bavdekar, Ashish;
Bogoch, Isaac I;
Clemens, John D;
da Silva, Kesia Esther;
De, Anuradha;
de Ligt, Joep;
Diaz Guevara, Paula Lucia;
Dolecek, Christiane;
Dutta, Shanta;
Ehlers, Marthie M;
Francois Watkins, Louise;
Garrett, Denise O;
Godbole, Gauri;
Gordon, Melita A;
Greenhill, Andrew R;
Griffin, Chelsey;
Gupta, Madhu;
Hendriksen, Rene S;
Heyderman, Robert S;
Hooda, Yogesh;
Hormazabal, Juan Carlos;
Ikhimiukor, Odion O;
Iqbal, Junaid;
Jacob, Jobin John;
Jenkins, Claire;
Jinka, Dasaratha Ramaiah;
John, Jacob;
Kang, Gagandeep;
Kanteh, Abdoulie;
Kapil, Arti;
Karkey, Abhilasha;
Kariuki, Samuel;
Kingsley, Robert A;
Koshy, Roshine Mary;
Lauer, AC;
Levine, Myron M;
Lingegowda, Ravikumar Kadahalli;
Luby, Stephen P;
Mackenzie, Grant Austin;
Mashe, Tapfumanei;
Msefula, Chisomo;
Mutreja, Ankur;
Nagaraj, Geetha;
Nagaraj, Savitha;
Nair, Satheesh;
Naseri, Take K;
Nimarota-Brown, Susana;
Njamkepo, Elisabeth;
Okeke, Iruka N;
Perumal, Sulochana Putli Bai;
Pollard, Andrew J;
Pragasam, Agila Kumari;
Qadri, Firdausi;
Qamar, Farah N;
Rahman, Sadia Isfat Ara;
Rambocus, Savitra Devi;
Rasko, David A;
Ray, Pallab;
Robins-Browne, Roy;
Rongsen-Chandola, Temsunaro;
Rutanga, Jean Pierre;
Saha, Samir K;
Saha, Senjuti;
Saigal, Karnika;
Sajib, Mohammad Saiful Islam;
Seidman, Jessica C;
Shakya, Jivan;
Shamanna, Varun;
Shastri, Jayanthi;
Shrestha, Rajeev;
Sia, Sonia;
Sikorski, Michael J;
Singh, Ashita;
Smith, Anthony M;
Tagg, Kaitlin A;
Tamrakar, Dipesh;
Tanmoy, Arif Mohammed;
Thomas, Maria;
Thomas, Mathew S;
Thomsen, Robert;
Thomson, Nicholas R;
Tupua, Siaosi;
Vaidya, Krista;
Valcanis, Mary;
Veeraraghavan, Balaji;
Weill, François-Xavier;
Wright, Jackie;
Dougan, Gordon;
Argimón, Silvia;
Keane, Jacqueline A;
Aanensen, David M;
Baker, Stephen;
Holt, Kathryn E;
Global Typhoid Genomics Consortium Group Authorship;
(2023)
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes.
eLife, 12.
e85867-.
ISSN 2050-084X
DOI: https://doi.org/10.7554/eLife.85867
Chandna, Arjun;
Mahajan, Raman;
Gautam, Priyanka;
Mwandigha, Lazaro;
Dittrich, Sabine;
Kumar, Vikash;
Osborn, Jennifer;
Kumar, Pragya;
Koshiaris, Constantinos;
Varghese, George M;
+2 more...
Lubell, Yoel;
Burza, Sakib;
(2023)
Point-of-care prognostication in moderate Covid-19: Analytical validation and prognostic accuracy of a soluble urokinase plasminogen activator receptor (suPAR) rapid test.
PLOS global public health, 3 (8).
e0001538-.
ISSN 2767-3375
DOI: https://doi.org/10.1371/journal.pgph.0001538
Chang, Michelle A;
Impoinvil, Daniel;
Hamre, Karen ES;
Dalexis, Paul-Emile;
Mérilien, Jean-Baptiste;
Dismer, Amber M;
Fouché, Bernadette;
Desir, Luccene;
Holmes, Kathleen;
Lafortune, Willy;
+17 more...
Herman, Camelia;
Rogier, Eric;
Noland, Gregory S;
Young, Alyssa J;
Druetz, Thomas;
Ashton, Ruth;
Eisele, Thomas P;
Cohen, Justin;
van den Hoogen, Lotus;
Stresman, Gillian;
Drakeley, Chris;
Pothin, Emilie;
Cameron, Ewan;
Battle, Katherine E;
Williamson, John;
Telfort, Marc-Aurèle;
Lemoine, Jean Frantz;
(2023)
Acceptability, Feasibility, Drug Safety, and Effectiveness of a Pilot Mass Drug Administration with a Single Round of Sulfadoxine-Pyrimethamine Plus Primaquine and Indoor Residual Spraying in Communities with Malaria Transmission in Haiti, 2018.
The American journal of tropical medicine and hygiene, 108 (6).
pp. 1127-1139.
ISSN 0002-9637
DOI: https://doi.org/10.4269/ajtmh.22-0623
Claessens, Antoine;
Stewart, Lindsay B;
Drury, Eleanor;
Ahouidi, Ambroise D;
Amambua-Ngwa, Alfred;
Diakite, Mahamadou;
Kwiatkowski, Dominic P;
Awandare, Gordon A;
Conway, David J;
(2023)
Genomic variation during culture adaptation of genetically complex Plasmodium falciparum clinical isolates.
Microbial genomics, 9 (5).
ISSN 2057-5858
DOI: https://doi.org/10.1099/mgen.0.001009
Cleghorn, Laura AT;
Wall, Richard J;
Albrecht, Sébastien;
MacGowan, Stuart A;
Norval, Suzanne;
De Rycker, Manu;
Woodland, Andrew;
Spinks, Daniel;
Thompson, Stephen;
Patterson, Stephen;
+12 more...
Corpas Lopez, Victoriano;
Dey, Gourav;
Collie, Iain T;
Hallyburton, Irene;
Kime, Robert;
Simeons, Frederick RC;
Stojanovski, Laste;
Frearson, Julie A;
Wyatt, Paul G;
Read, Kevin D;
Gilbert, Ian H;
Wyllie, Susan;
(2023)
Development of a 2,4-Diaminothiazole Series for the Treatment of Human African Trypanosomiasis Highlights the Importance of Static-Cidal Screening of Analogues.
Journal of medicinal chemistry, 66 (13).
pp. 8896-8916.
ISSN 0022-2623
DOI: https://doi.org/10.1021/acs.jmedchem.3c00509
Conroy, Andrea L;
Datta, Dibyadyuti;
Hoffmann, Angelika;
Wassmer, Samuel C;
(2023)
The brain-kidney-retinal axis in severe falciparum malaria.
Trends in parasitology, 39 (6).
pp. 412-413.
ISSN 1471-4922
DOI: https://doi.org/10.1016/j.pt.2023.03.014
Conroy, Andrea L;
Datta, Dibyadyuti;
Hoffmann, Angelika;
Wassmer, Samuel C;
(2023)
The kidney-brain pathogenic axis in severe falciparum malaria.
Trends in parasitology, 39 (3).
pp. 191-199.
ISSN 1471-4922
DOI: https://doi.org/10.1016/j.pt.2023.01.005
Cuypers, Wim L;
Meysman, Pieter;
Weill, François-Xavier;
Hendriksen, Rene S;
Beyene, Getenet;
Wain, John;
Nair, Satheesh;
Chattaway, Marie A;
Perez-Sepulveda, Blanca M;
Ceyssens, Pieter-Jan;
+19 more...
de Block, Tessa;
Lee, Winnie WY;
Pardos de la Gandara, Maria;
Kornschober, Christian;
Moran-Gilad, Jacob;
Veldman, Kees T;
Cormican, Martin;
Torpdahl, Mia;
Fields, Patricia I;
Černý, Tomáš;
Hardy, Liselotte;
Tack, Bieke;
Mellor, Kate C;
Thomson, Nicholas;
Dougan, Gordon;
Deborggraeve, Stijn;
Jacobs, Jan;
Laukens, Kris;
Van Puyvelde, Sandra;
(2023)
A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia.
Nature communications, 14 (1).
3517-.
ISSN 2041-1723
DOI: https://doi.org/10.1038/s41467-023-38902-x
D
D'Addiego, Jake;
Elaldi, Nazif;
Wand, Nadina;
Osman, Karen;
Bagci, Binnur Koksal;
Kennedy, Emma;
Pektas, Ayse Nur;
Hart, Eilish;
Slack, Gillian;
Hewson, Roger;
(2023)
Investigating the effect of ribavirin treatment on genetic mutations in Crimean-Congo haemorrhagic fever virus (CCHFV) through next-generation sequencing.
Journal of medical virology, 95 (2).
e28548-.
ISSN 0146-6615
DOI: https://doi.org/10.1002/jmv.28548
Danso, Samuel O;
Manu, Alexander;
Fenty, Justin;
Amanga-Etego, Seeba;
Avan, Bilal Iqbal;
Newton, Sam;
Soremekun, Seyi;
Kirkwood, Betty;
(2023)
Population cause of death estimation using verbal autopsy methods in large-scale field trials of maternal and child health: lessons learned from a 20-year research collaboration in Central Ghana.
Emerging themes in epidemiology, 20 (1).
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ISSN 1742-7622
DOI: https://doi.org/10.1186/s12982-023-00120-7
Dombrowski, Jamille Gregório;
Acford-Palmer, Holly;
Campos, Monica;
Separovic, Erika Paula Machado;
Epiphanio, Sabrina;
Clark, Taane Gregory;
Campino, Susana;
Marinho, Claudio Romero Farias;
(2023)
Genetic diversity of Plasmodium vivax isolates from pregnant women in the Western Brazilian Amazon: a prospective cohort study.
Lancet regional health - Americas, 18.
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DOI: https://doi.org/10.1016/j.lana.2022.100407
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Eales, Oliver;
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Tang, Sonja N;
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Wang, Haowei;
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Le Viet, Thanh;
Foster-Nyarko, Ebenezer;
Prosolek, Sophie;
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Atchison, Christina;
Ashby, Deborah;
Cooke, Graham;
Barclay, Wendy;
Donnelly, Christl A;
O'Grady, Justin;
Volz, Erik;
The Covid-Genomics Uk Cog-Uk Consortium;
Darzi, Ara;
Ward, Helen;
Elliott, Paul;
Riley, Steven;
(2023)
The use of representative community samples to assess SARS-CoV-2 lineage competition: Alpha outcompetes Beta and wild-type in England from January to March 2021.
Microbial genomics, 9 (2).
ISSN 2057-5858
DOI: https://doi.org/10.1099/mgen.0.000887
Eckold, Clare;
van Doorn, Cassandra LR;
Ruslami, Rovina;
Ronacher, Katharina;
Riza, Anca-Lelia;
van Veen, Suzanne;
Lee, Ji-Sook;
Kumar, Vinod;
Kerry-Barnard, Sarah;
Malherbe, Stephanus T;
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Kleynhans, Léanie;
Stanley, Kim;
Joosten, Simone A;
Critchley, Julia A;
Hill, Philip C;
van Crevel, Reinout;
Wijmenga, Cisca;
Haks, Mariëlle C;
Ioana, Mihai;
Alisjahbana, Bachti;
Walzl, Gerhard;
Ottenhoff, Tom HM;
Dockrell, Hazel M;
Vianello, Eleonora;
Cliff, Jacqueline M;
TANDEM Consortium$;
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Impaired resolution of blood transcriptomes through tuberculosis treatment with diabetes comorbidity.
Clinical and translational medicine, 13 (9).
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Edwards, RTM;
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Development of a gene editing platform for sand fly vectors of Leishmania through CRISPR-Cas9 genetic modification targeting genes associated with olfaction.
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04671278
El-Mansi, Sammy;
Robinson, Christopher L;
Kostelnik, Katja B;
McCormack, Jessica J;
Mitchell, Tom P;
Lobato-Márquez, Damián;
Rajeeve, Vinothini;
Cutillas, Pedro;
Cutler, Daniel F;
Mostowy, Serge;
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Proximity proteomics identifies septins and PAK2 as decisive regulators of actomyosin-mediated expulsion of von Willebrand factor.
Blood, 141 (8).
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Emiru, Tadele;
Getachew, Dejene;
Murphy, Maxwell;
Sedda, Luigi;
Ejigu, Legesse Alamerie;
Bulto, Mikiyas Gebremichael;
Byrne, Isabel;
Demisse, Mulugeta;
Abdo, Melat;
Chali, Wakweya;
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Elliott, Aaron;
Vickers, Eric Neubauer;
Aranda-Díaz, Andrés;
Alemayehu, Lina;
Behaksera, Sinknesh W;
Jebessa, Gutema;
Dinka, Hunduma;
Tsegaye, Tizita;
Teka, Hiwot;
Chibsa, Sheleme;
Mumba, Peter;
Girma, Samuel;
Hwang, Jimee;
Yoshimizu, Melissa;
Sutcliffe, Alice;
Taffese, Hiwot Solomon;
Bayissa, Gudissa Aseffa;
Zohdy, Sarah;
Tongren, Jon Eric;
Drakeley, Chris;
Greenhouse, Bryan;
Bousema, Teun;
Tadesse, Fitsum G;
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Evidence for a role of Anopheles stephensi in the spread of drug- and diagnosis-resistant malaria in Africa.
Nature medicine, 29 (12).
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David, Sophia;
Aanensen, David M;
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Brisse, Sylvain;
Holt, Kathryn E;
(2023)
Corrigendum: 'Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae'.
Microbial genomics, 9 (8).
ISSN 2057-5858
DOI: https://doi.org/10.1099/mgen.0.001084
Foster-Nyarko, Ebenezer;
Cottingham, Hugh;
Wick, Ryan R;
Judd, Louise M;
Lam, Margaret MC;
Wyres, Kelly L;
Stanton, Thomas D;
Tsang, Kara K;
David, Sophia;
Aanensen, David M;
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Brisse, Sylvain;
Holt, Kathryn E;
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Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae.
Microbial genomics, 9 (2).
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DOI: https://doi.org/10.1099/mgen.0.000936
Francisco, Amanda F;
Chen, Gong;
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Scandale, Ivan;
Olmo, Francisco;
Shackleford, David M;
Zulfiqar, Bilal;
Kratz, Jadel M;
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Pham, Thao;
Saunders, Jessica;
Hu, Meiyu;
Avery, Vicky M;
Charman, Susan A;
Kelly, John M;
Chatelain, Eric;
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Preclinical data do not support the use of amiodarone or dronedarone as antiparasitic drugs for Chagas disease at the approved human dosing regimen.
Frontiers in tropical diseases, 4.
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Francisco, Amanda Fortes;
Sousa, Giovane R;
Vaughan, Mhairi;
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Khan, Archie;
Jayawardhana, Shiromani;
Taylor, Martin C;
Lewis, Michael D;
Kelly, John M;
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Cardiac Abnormalities in a Predictive Mouse Model of Chagas Disease.
Pathogens, 12 (11).
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Fraser, Alice J;
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Kelly, Daniel;
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LSTM Diagnostics Group;
CONDOR Steering Group;
Body, Richard;
Adams, Emily R;
Atienzar, Ana Cubas;
Edwards, Thomas;
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Allen, David J;
(2023)
A high-resolution melt curve toolkit to identify lineage-defining SARS-CoV-2 mutations.
Scientific reports, 13 (1).
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Fréville, Aline;
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Identification of a non-exported Plasmepsin V substrate that functions in the parasitophorous vacuole of malaria parasites.
mBio, 15 (1).
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Ramalho, Walter Massa;
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Assessing the impact of the "malaria supporters project" intervention to malaria control in the Brazilian Amazon: an interrupted time-series analysis.
Malaria Journal, 22 (1).
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Gomes, Margarida C;
Brokatzky, Dominik;
Bielecka, Magdalena K;
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Mostowy, Serge;
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Shigella induces epigenetic reprogramming of zebrafish neutrophils.
Science advances, 9 (36).
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González, Silvia;
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Thomas, John;
Braillard, Stephanie;
Brunori, Gino;
Camino Díaz, Isabel;
Cantizani, Juan;
Carvalho, Sandra;
Castañeda Casado, Pablo;
Chatelain, Eric;
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Cotillo, Ignacio;
Fiandor, Jose M;
Francisco, Amanda Fortes;
Grimsditch, David;
Keenan, Martine;
Kelly, John M;
Kessler, Albane;
Luise, Chiara;
Lyon, Jon J;
MacLean, Lorna;
Marco, Maria;
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Martinez Martinez, Maria S;
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Santos-Villarejo, Angel;
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Short-course combination treatment for experimental chronic Chagas disease.
Science translational medicine, 15 (726).
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Gómez González, PJ;
(2023)
Analysis of Mycobacterium tuberculosis ‘omics data to inform on loci linked to drug resistance, pathogenicity and virulence.
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04670763
Gómez-González, Paula Josefina;
Grabowska, Anna D;
Tientcheu, Leopold D;
Tsolaki, Anthony G;
Hibberd, Martin L;
Campino, Susana;
Phelan, Jody E;
Clark, Taane G;
(2023)
Functional genetic variation in pe/ppe genes contributes to diversity in Mycobacterium tuberculosis lineages and potential interactions with the human host.
Frontiers in microbiology, 14.
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Güler, Gizem Özbaykal;
Mostowy, Serge;
(2023)
The septin cytoskeleton: Heteromer composition defines filament function.
The Journal of cell biology, 222 (3).
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Jones-Warner, William;
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Toizumi, Michiko;
Yoshida, Lay-Myint;
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Hibberd, Martin;
Miller, Elizabeth;
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Hué, Stéphane;
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Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study.
Wellcome open research, 8.
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DOI: https://doi.org/10.12688/wellcomeopenres.19219.1
Hamre, Karen ES;
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Williamson, John;
Kishore, Nishant;
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McGee, Kathleen;
Pierre, Baby;
Fouché, Bernadette;
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Impoinvil, Daniel;
Holmes, Kathleen;
Stresman, Gillian;
Druetz, Thomas;
Eisele, Thomas P;
Drakeley, Chris;
Lemoine, Jean Frantz;
Chang, Michelle A;
(2023)
Spatial Clustering and Risk Factors for Malaria Infections and Marker of Recent Exposure to Plasmodium falciparum from a Household Survey in Artibonite, Haiti.
The American journal of tropical medicine and hygiene, 109 (2).
pp. 258-272.
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Harrison, Mark A;
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Allen, Nyasha;
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Birchall, Kristian;
Bond, Michael;
Kaur, Harparkash;
Wren, Brendan W;
Bergeron, Julien RC;
Dawson, Lisa F;
(2023)
Identification of novel p-cresol inhibitors that reduce Clostridioides difficile's ability to compete with species of the gut microbiome.
Scientific reports, 13 (1).
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ISSN 2045-2322
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Hart, Melissa N;
Mohring, Franziska;
DonVito, Sophia M;
Thomas, James A;
Muller-Sienerth, Nicole;
Wright, Gavin J;
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Saibil, Helen R;
Moon, Robert W;
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Sequential roles for red blood cell binding proteins enable phased commitment to invasion for malaria parasites.
Nature communications, 14 (1).
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DOI: https://doi.org/10.1038/s41467-023-40357-z
Hetland, Marit AK;
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Bernhoff, Eva;
Bakksjø, Ragna-Johanne;
Kaspersen, Håkon;
Rettedal, Siren I;
Sundsfjord, Arnfinn;
Holt, Kathryn E;
Löhr, Iren H;
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Within-patient and global evolutionary dynamics of Klebsiella pneumoniae ST17.
Microbial genomics, 9 (5).
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Higgins, MCW;
(2023)
Developing an RPA-based Molecular Barcoding Tool for Plasmodium Malaria.
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04670986
Hill, Zelee;
Zafar, Shamsa;
Soremekun, Seyi;
Sikander, Siham;
Avan, Bilal Iqbal;
Roy, Reetabrata;
Aziz, Sarmad;
Kumar, Divya;
Parveen, Nazia;
Saleem, Shumaila;
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Verma, Deepali;
Sharma, Kamal Kant;
Skordis, Jolene;
Hafeez, Assad;
Rahman, Atif;
Kirkwood, Betty;
Divan, Gauri;
(2023)
Can home visits for early child development be implemented with sufficient coverage and quality at scale? Evidence from the SPRING program in India and Pakistan.
Frontiers in nutrition, 10.
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Hong, G;
(2023)
Investigation of Campylobacter jejuni Modulation of Host Defence Mechanisms in Human Intestinal Epithelial Cells.
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04671312
Hong, Geunhye;
Davies, Cadi;
Omole, Zahra;
Liaw, Janie;
Grabowska, Anna D;
Canonico, Barbara;
Corcionivoschi, Nicolae;
Wren, Brendan W;
Dorrell, Nick;
Elmi, Abdi;
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Gundogdu, Ozan;
(2023)
Campylobacter jejuni Modulates Reactive Oxygen Species Production and NADPH Oxidase 1 Expression in Human Intestinal Epithelial Cells.
Cellular microbiology, 2023.
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Hou, Mimi M;
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Themistocleous, Yrene;
Rawlinson, Thomas A;
Diouf, Ababacar;
Martinez, Francisco J;
Nielsen, Carolyn M;
Lias, Amelia M;
King, Lloyd DW;
Edwards, Nick J;
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Greenwood, Nicola M;
Kingham, Lucy;
Poulton, Ian D;
Khozoee, Baktash;
Goh, Cyndi;
Hodgson, Susanne H;
Mac Lochlainn, Dylan J;
Salkeld, Jo;
Guillotte-Blisnick, Micheline;
Huon, Christèle;
Mohring, Franziska;
Reimer, Jenny M;
Chauhan, Virander S;
Mukherjee, Paushali;
Biswas, Sumi;
Taylor, Iona J;
Lawrie, Alison M;
Cho, Jee-Sun;
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Long, Carole A;
Moon, Robert W;
Miura, Kazutoyo;
Silk, Sarah E;
Chitnis, Chetan E;
Minassian, Angela M;
Draper, Simon J;
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Vaccination with Plasmodium vivax Duffy-binding protein inhibits parasite growth during controlled human malaria infection.
Science translational medicine, 15 (704).
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Huan, Yang W;
Torraca, Vincenzo;
Brown, Russell;
Fa-Arun, Jidapha;
Miles, Sydney L;
Oyarzún, Diego A;
Mostowy, Serge;
Wang, Baojun;
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P1 Bacteriophage-Enabled Delivery of CRISPR-Cas9 Antimicrobial Activity Against Shigella flexneri.
ACS synthetic biology, 12 (3).
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Ibrahim, A;
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From genome to function: A genomic investigation into understudied populations of the malaria parasites Plasmodium malariae and P.vivax.
PhD thesis, London School of Hygiene & Tropical Medicine.
DOI: https://doi.org/10.17037/PUBS.04670765
Ibrahim, Amy;
Manko, Emilia;
Dombrowski, Jamille G;
Campos, Mónica;
Benavente, Ernest Diez;
Nolder, Debbie;
Sutherland, Colin J;
Nosten, Francois;
Fernandez, Diana;
Vélez-Tobón, Gabriel;
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Castaño, Alberto Tobón;
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da Silva Santos, Simone;
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Regina de Souza Baptista, Andrea;
Dantas Machado, Ricardo Luiz;
Marinho, Claudio RF;
Clark, Taane G;
Campino, Susana;
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Population-based genomic study of Plasmodium vivax malaria in seven Brazilian states and across South America.
Lancet regional health. Americas, 18.
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Jayawardhana, Shiromani;
Ward, Alexander I;
Francisco, Amanda F;
Lewis, Michael D;
Taylor, Martin C;
Kelly, John M;
Olmo, Francisco;
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Benznidazole treatment leads to DNA damage in Trypanosoma cruzi and the persistence of rare widely dispersed non-replicative amastigotes in mice.
PLoS Pathogens, 19 (11).
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ISSN 1553-7366
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Jiang, Qi;
Liu, Hai-Can;
Liu, Qing-Yun;
Phelan, Jody E;
Tao, Feng-Xi;
Zhao, Xiu-Qin;
Wang, Jian;
Glynn, Judith R;
Takiff, Howard E;
Clark, Taane G;
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Wan, Kang-Lin;
Gao, Qian;
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The Evolution and Transmission Dynamics of Multidrug-Resistant Tuberculosis in an Isolated High-Plateau Population of Tibet, China.
Microbiology spectrum, 11 (2).
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Kabongo, Augustin Tshibaka;
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Sakura, Takaya;
Bundutidi, Gloria Mavinga;
Hartuti, Endah Dwi;
Davies, Cadi;
Gundogdu, Ozan;
Kita, Kiyoshi;
Shiba, Tomoo;
Inaoka, Daniel Ken;
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Biochemical characterization and identification of ferulenol and embelin as potent inhibitors of malate:quinone oxidoreductase from Campylobacter jejuni.
Frontiers in Molecular Biosciences, 10.
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ISSN 2296-889X
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Kagaya, Wataru;
Chan, Chim W;
Kongere, James;
Kanoi, Bernard N;
Ngara, Mtakai;
Omondi, Protus;
Osborne, Ashley;
Barbieri, Laura;
Kc, Achyut;
Minakawa, Noboru;
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Gitaka, Jesse;
Kaneko, Akira;
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Evaluation of the protective efficacy of Olyset®Plus ceiling net on reducing malaria prevalence in children in Lake Victoria Basin, Kenya: study protocol for a cluster-randomized controlled trial.
Trials, 24 (1).
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ISSN 1745-6215
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Khan, Dam;
Thomas, Shola-Able;
Tientcheu, Peggy-Estelle;
Suso, Sambou MS;
Dupont, Christopher;
Kwambana-Adams, Brenda;
Mohammed, Nuredin Ibrahim;
Nicol, Mark P;
Antonio, Martin;
(2023)
Comparison of DNA concentration and bacterial pathogen PCR detection when using two DNA extraction kits for nasopharyngeal/oropharyngeal samples.
PLoS One, 18 (8).
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Kirkwood, Betty R;
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Soremekun, Seyi;
Bhopal, Sunil S;
Avan, Bilal;
Lingam, Raghu;
Gram, Lu;
Amenga-Etego, Seeba;
Khan, Bushra;
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Aziz, Sarmad;
Kumar, Divya;
Verma, Deepali;
Sharma, Kamal Kant;
Panchal, Satya Narayan;
Zafar, Shamsa;
Skordis, Jolene;
Batura, Neha;
Hafeez, Assad;
Hill, Zelee;
Divan, Gauri;
Rahman, Atif;
(2023)
Effect of the SPRING home visits intervention on early child development and growth in rural India and Pakistan: parallel cluster randomised controlled trials.
Frontiers in nutrition, 10.
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Kristan, Mojca;
Acford-Palmer, Holly;
Campos, Monica Oliveira;
Collins, Emma L;
Phelan, Jody;
Portwood, Natalie M;
Pelloquin, Bethanie;
Clarke, Sian;
Lines, Jo;
Clark, Taane G;
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Walker, Thomas;
Campino, Susana;
Messenger, Louisa A;
(2023)
Towards environmental detection, quantification, and molecular characterization of Anopheles stephensi and Aedes aegypti from experimental larval breeding sites.
Scientific Reports, 13 (1).
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Källander, Karin;
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Hill, Zelee;
Kasteng, Frida;
Kertho, Edmound;
Nanyonjo, Agnes;
Ten Asbroek, Guus;
Nakirunda, Maureen;
Lumumba, Patrick;
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Ayebale, Godfrey;
Bagorogoza, Benson;
Vassall, Anna;
Meek, Sylvia;
Tibenderana, James;
Lingam, Raghu;
Kirkwood, Betty;
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Improving community health worker treatment for malaria, diarrhoea, and pneumonia in Uganda through inSCALE community and mHealth innovations: A cluster randomised controlled trial.
PLOS digital health, 2 (6).
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Chirwa-Chobe, Masuzyo;
Sukwa, Nsofwa;
Chipeta, Chikumbutso;
Velu, Rachel;
Njekwa, Katanekwa;
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Mubanga, Cynthia;
Mwape, Innocent;
Goodier, Martin Rhys;
Chilengi, Roma;
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Evaluation of ROTARIX® Booster Dose Vaccination at 9 Months for Safety and Enhanced Anti-Rotavirus Immunity in Zambian Children: A Randomised Controlled Trial.
Vaccines, 11 (2).
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Lensen, Arthur;
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Mostowy, Serge;
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An automated microscopy workflow to study Shigella-neutrophil interactions and antibiotic efficacy in vivo.
Disease models & mechanisms, 16 (6).
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Libiseller-Egger, Julian;
Wang, Linfeng;
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Clark, Taane G;
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TB-ML-a framework for comparing machine learning approaches to predict drug resistance of Mycobacterium tuberculosis.
Bioinformatics advances, 3 (1).
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Lindesmith, Lisa C;
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Using whole genome sequencing data to identify strain-types, transmission enhancers and novel drug resistance mutations of Mycobacterium tuberculosis.
PhD thesis, London School of Hygiene & Tropical Medicine.
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Projected health impact of post-discharge malaria chemoprevention among children with severe malarial anaemia in Africa.
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A multifaceted investigation of the genomics of malaria, from parasite to host, using next-generation sequencing technologies.
PhD thesis, London School of Hygiene & Tropical Medicine.
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Development and validation of serological assays to evaluate malaria transmission.
PhD thesis, London School of Hygiene & Tropical Medicine.
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Malaria parasite density and detailed qualitative microscopy enhances large-scale profiling of infection endemicity in Nigeria.
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Novel Lipophilic Hydroxamates Based on Spirocarbocyclic Hydantoin Scaffolds with Potent Antiviral and Trypanocidal Activity.
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A combinatorial DNA assembly approach to biosynthesis of N-linked glycans in E. coli.
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The genomic characterization of Salmonella Paratyphi A from an outbreak of enteric fever in Vadodara, India.
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Rapid profiling of Plasmodium parasites from genome sequences to assist malaria control.
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Phelan, Jody;
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Yanai, Hideki;
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Genome-wide host-pathogen analyses reveal genetic interaction points in tuberculosis disease.
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Pietersen, Elize;
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Variation in missed doses and reasons for discontinuation of anti-tuberculosis drugs during hospital treatment for drug-resistant tuberculosis in South Africa.
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