Knight, Gwenan M; Davies, Nicholas G; Colijn, Caroline; Coll, Francesc; Donker, Tjibbe; Gifford, Danna R; Glover, Rebecca E; Jit, Mark; Klemm, Elizabeth; Lehtinen, Sonja; +9 more... Lindsay, Jodi A; Lipsitch, Marc; Llewelyn, Martin J; Mateus, Ana LP; Robotham, Julie V; Sharland, Mike; Stekel, Dov; Yakob, Laith; Atkins, Katherine E; (2019) Mathematical modelling for antibiotic resistance control policy: do we know enough? BMC infectious diseases, 19 (1). p. 1011. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-019-4630-y

Leclerc, Quentin J; Lindsay, Jodi A; Knight, Gwenan M; (2019) Mathematical modelling to study the horizontal transfer of antimicrobial resistance genes in bacteria: current state of the field and recommendations. Journal of The Royal Society Interface, 16 (157). p. 20190260. ISSN 1742-5689 DOI: https://doi.org/10.1098/rsif.2019.0260

Leclerc, Quentin; Naylor, Nichola; Aiken, Alexander; Coll, Francesc; Knight, Gwenan; (2019) Feasibility of informing syndrome-level empiric antibiotic recommendations using publicly available antibiotic resistance datasets. Wellcome Open Research, 4. p. 140. DOI: https://doi.org/10.12688/wellcomeopenres.15477.1

Naylor, Nichola R; Pouwels, Koen B; Hope, Russell; Green, Nathan; Henderson, Katherine L; Knight, Gwenan M; Atun, Rifat; Robotham, Julie V; Deeny, Sarah R; (2019) The health and cost burden of antibiotic resistant and susceptible Escherichia coli bacteraemia in the English hospital setting: A national retrospective cohort study. PloS one, 14 (9). e0221944. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0221944

Rhodes, Sophie J; Knight, Gwenan M; Kirschner, Denise E; White, Richard G; Evans, Thomas G; (2019) Dose finding for new vaccines: the role for immunostimulation/immunodynamic modelling. Journal of Theoretical Biology, 465. pp. 51-55. ISSN 0022-5193 DOI: https://doi.org/10.1016/j.jtbi.2019.01.017

Bui, DP; Oren, E; Roe, DJ; Brown, HE; Harris, RB; Knight, GM; Gilman, RH; Grandjean, L; (2018) A Case Control Study to Identify Community Venues Associated with Genetically Clustered Multidrug-Resistant Tuberculosis Disease in Lima, Peru. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy746

Knight, G; Lambert, H; Feil, E; Holmes, M; Lindsay, J; (2018) The importance of cross-disciplinary research to combat antimicrobial resistance: introducing a new pop-up journal, X-AMR. Microbial genomics. ISSN 2057-5858 DOI: https://doi.org/10.1099/mic.0.000684

Knight, GM; Clarkson, M; de Silva, TI; (2018) Potential impact of influenza vaccine roll-out on antibiotic use in Africa. The Journal of antimicrobial chemotherapy. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dky172

Knight, GM; Dyakova, E; Mookerjee, S; Davies, F; Brannigan, ET; Otter, JA; Holmes, AH; (2018) Fast and expensive (PCR) or cheap and slow (culture)? A mathematical modelling study to explore screening for carbapenem resistance in UK hospitals. BMC medicine, 16 (1). p. 141. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-018-1117-4

Knight, Gwenan M; Costelloe, Ceire; Deeny, Sarah R; Moore, Luke SP; Hopkins, Susan; Johnson, Alan P; Robotham, Julie V; Holmes, Alison H; (2018) Quantifying where human acquisition of antibiotic resistance occurs: a mathematical modelling study. BMC MEDICINE, 16 (1). ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-018-1121-8

Knight, Gwenan M; Zimic, Mirko; Funk, Sebastian; Gilman, Robert H; Friedland, Jon S; Grandjean, Louis; (2018) The relative fitness of drug-resistant Mycobacterium tuberculosis: a modelling study of household transmission in Peru. JOURNAL OF THE ROYAL SOCIETY INTERFACE, 15 (143). ISSN 1742-5689 DOI: https://doi.org/10.1098/rsif.2018.0025

Naylor, Nichola R; Atun, Rifat; Zhu, Nina; Kulasabanathan, Kavian; Silva, Sachin; Chatterjee, Anuja; Knight, Gwenan M; Robotham, Julie V; (2018) Estimating the burden of antimicrobial resistance: a systematic literature review. Antimicrobial resistance and infection control, 7 (1). p. 58. ISSN 2047-2994 DOI: https://doi.org/10.1186/s13756-018-0336-y

de Lima Hutchison, C; Knight, G; Stabler, R; Chandler, C; (2018) The modern era must end: antibiotic resistance helps us rethink medicine and farming. BMJ Opinion. https://blogs.bmj.com/bmj/2018/07/11/the-modern-er... Full text not available from this repository.

Knight, GM; Costelloe, C; Murray, KA; Robotham, JV; Atun, R; Holmes, AH; (2017) Addressing the unknowns of antimicrobial resistance: quantifying and mapping the drivers of burden. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/cix765

Knight, Gwenan; Zimic, Mirko; Funk, Sebastian; Gilman, Robert; Friedland, Jon; Grandjean, Louis; (2017) The relative fitness of drug resistant Mycobacterium tuberculosis: a modelling study of household transmission in Peru. DOI: https://doi.org/10.1101/195313

Rhodes, SJ; Sarfas, C; Knight, GM; White, A; Pathan, AA; McShane, H; Evans, TG; Fletcher, H; Sharpe, S; White, RG; (2017) Predicting IFN-γ responses after BCG vaccination in humans from macaques: A proof-of-concept study of Immunostimulation/Immunodynamic modelling methods. Clinical and vaccine immunology. ISSN 1556-6811 DOI: https://doi.org/10.1128/CVI.00525-16

Fofana, MO; Shrestha, S; Knight, GM; Cohen, T; White, RG; Cobelens, F; Dowdy, DW; (2016) Role of pyrazinamide in the emergence of extensively drug-resistant tuberculosis: a multi-strain mathematical model. Antimicrobial agents and chemotherapy, 61 (3). ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00498-16

Gomez, GB; Dowdy, DW; Bastos, ML; Zwerling, A; Sweeney, S; Foster, N; Trajman, A; Islam, MA; Kapiga, S; Sinanovic, E; +5 more... Knight, GM; White, RG; Wells, WA; Cobelens, FG; Vassall, A; (2016) Cost and cost-effectiveness of tuberculosis treatment shortening: a model-based analysis. BMC infectious diseases, 16 (1). p. 726. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-016-2064-3

Harris, RC; Sumner, T; Knight, GM; White, RG; (2016) Systematic review of mathematical models exploring the epidemiological impact of future TB vaccines. Human vaccines & immunotherapeutics, 12 (11). pp. 2813-2832. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2016.1205769

Knight, GM; Houben, RM; Lalli, M; White, RG; (2016) Ebola: the hidden toll of tuberculosis. Public health action, 6 (1). p. 2. ISSN 2220-8372 DOI: https://doi.org/10.5588/pha.16.0019 Full text not available from this repository.

Naylor, NR; Silva, S; Kulasabanathan, K; Atun, R; Zhu, N; Knight, GM; Robotham, J; (2016) Methods for estimating the burden of antimicrobial resistance: a systematic literature review protocol. Systematic reviews, 5 (1). p. 187. ISSN 2046-4053 DOI: https://doi.org/10.1186/s13643-016-0364-8

Rhodes, SJ; Zelmer, A; Knight, GM; Prabowo, SA; Stockdale, L; Evans, TG; Lindenstrøm, T; White, RG; Fletcher, H; (2016) The TB vaccine H56+IC31 dose-response curve is peaked not saturating: Data generation for new mathematical modelling methods to inform vaccine dose decisions. Vaccine. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2016.10.060

Vella, V; Moore, LS; Robotham, JV; Davies, F; Birgand, GJ; Otter, JA; Brannigan, E; Dyakova, E; Knight, GM; Mookerjee, S; +1 more... Holmes, AH; (2016) Isolation demand from carbapenemase-producing Enterobacteriaceae screening strategies based on a West London hospital network. The Journal of hospital infection, 94 (2). pp. 118-24. ISSN 0195-6701 DOI: https://doi.org/10.1016/j.jhin.2016.04.011

Yates, TA; Khan, PY; Knight, GM; Taylor, JG; McHugh, TD; Lipman, M; White, RG; Cohen, T; Cobelens, FG; Wood, R; +2 more... Moore, DA; Abubakar, I; (2016) The transmission of Mycobacterium tuberculosis in high burden settings. The Lancet infectious diseases, 16 (2). pp. 227-38. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(15)00499-5

Fonseca, JD; Knight, GM; McHugh, TD; (2015) The complex evolution of antibiotic resistance in Mycobacterium tuberculosis. International journal of infectious diseases, 32. pp. 94-100. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2015.01.014

Knight, G; (2015) Building a research data management service for the London School of Hygiene & Tropical Medicine. Program, 49 (4). pp. 424-439. ISSN 0033-0337 DOI: https://doi.org/10.1108/prog-01-2015-0011

Knight, GM; Colijn, C; Shrestha, S; Fofana, M; Cobelens, F; White, RG; Dowdy, DW; Cohen, T; (2015) The Distribution of Fitness Costs of Resistance-Conferring Mutations Is a Key Determinant for the Future Burden of Drug-Resistant Tuberculosis: A Model-Based Analysis. Clinical infectious diseases, 61 (suppl). S147-S154. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ579

Knight, GM; Dharan, NJ; Fox, GJ; Stennis, N; Zwerling, A; Khurana, R; Dowdy, DW; (2015) Bridging the gap between evidence and policy for infectious diseases: How models can aid public health decision-making. International journal of infectious diseases. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2015.10.024

Knight, GM; Dodd, PJ; Grant, AD; Fielding, KL; Churchyard, GJ; White, RG; (2015) Tuberculosis prevention in South Africa. PloS one, 10 (4). e0122514. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0122514

Knight, GM; Gomez, GB; Dodd, PJ; Dowdy, D; Zwerling, A; Wells, WA; Cobelens, F; Vassall, A; White, RG; (2015) The Impact and Cost-Effectiveness of a Four-Month Regimen for First-Line Treatment of Active Tuberculosis in South Africa. PloS one, 10 (12). e0145796. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0145796

Rhodes, SJ; Knight, GM; Fielding, K; Scriba, TJ; Pathan, AA; McShane, H; Fletcher, H; White, RG; (2015) Individual-level factors associated with variation in mycobacterial-specific immune response: Gender and previous BCG vaccination status. Tuberculosis (Edinburgh, Scotland), 96. pp. 37-43. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2015.10.002

Stanczak-Mrozek, KI; Manne, A; Knight, GM; Gould, K; Witney, AA; Lindsay, JA; (2015) Within-host diversity of MRSA antimicrobial resistances. The Journal of antimicrobial chemotherapy. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkv119

Fofana, MO; Knight, GM; Gomez, GB; White, RG; Dowdy, DW; (2014) Population-level impact of shorter-course regimens for tuberculosis: a model-based analysis. PloS one, 9 (5). e96389. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0096389

Funk, S; Knight, GM; Jansen, VA; (2014) Ebola: the power of behaviour change. Nature, 515 (7528). p. 492. ISSN 0028-0836 DOI: https://doi.org/10.1038/515492b Full text not available from this repository.

Knight, GM; Griffiths, UK; Sumner, T; Laurence, YV; Gheorghe, A; Vassall, A; Glaziou, P; White, RG; (2014) Impact and cost-effectiveness of new tuberculosis vaccines in low- and middle-income countries. Proceedings of the National Academy of Sciences of the United States of America, 111 (43). pp. 15520-5. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1404386111 Full text not available from this repository.

Shrestha, S; Knight, GM; Fofana, M; Cohen, T; White, RG; Cobelens, F; Dowdy, DW; (2014) Drivers and trajectories of resistance to new first-line drug regimens for tuberculosis. Open forum infectious diseases, 1 (2). ofu073. ISSN 2328-8957 DOI: https://doi.org/10.1093/ofid/ofu073

Dodd, PJ; Knight, GM; Lawn, SD; Corbett, EL; White, RG; (2013) Predicting the long-term impact of antiretroviral therapy scale-up on population incidence of tuberculosis. PloS one, 8 (9). e75466. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0075466

Garnett, JP; Baker, EH; Naik, S; Lindsay, JA; Knight, GM; Gill, S; Tregoning, JS; Baines, DL; (2013) Metformin reduces airway glucose permeability and hyperglycaemia-induced Staphylococcus aureus load independently of effects on blood glucose. Thorax, 68 (9). pp. 835-45. ISSN 0040-6376 DOI: https://doi.org/10.1136/thoraxjnl-2012-203178

Knight, GM; Budd, EL; Lindsay, JA; (2013) Large mobile genetic elements carrying resistance genes that do not confer a fitness burden in healthcare-associated meticillin-resistant Staphylococcus aureus. Microbiology (Reading, England), 159 (Pt 8). pp. 1661-72. ISSN 1350-0872 DOI: https://doi.org/10.1099/mic.0.068551-0 Full text not available from this repository.

Knight, GM; Budd, EL; Whitney, L; Thornley, A; Al-Ghusein, H; Planche, T; Lindsay, JA; (2012) Shift in dominant hospital-associated methicillin-resistant Staphylococcus aureus (HA-MRSA) clones over time. The Journal of antimicrobial chemotherapy, 67 (10). pp. 2514-22. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dks245 Full text not available from this repository.

Lindsay, JA; Knight, GM; Budd, EL; McCarthy, AJ; (2012) Shuffling of mobile genetic elements (MGEs) in successful healthcare-associated MRSA (HA-MRSA). Mobile genetic elements, 2 (5). pp. 239-243. ISSN 2159-2543 DOI: https://doi.org/10.4161/mge.22085