Cain, AK; Boinett, CJ; Barquist, L; Dordel, J; Fookes, M; Mayho, M; Ellington, MJ; Goulding, D; Pickard, D; Wick, RR; +3 more... Holt, KE; Parkhill, J; Thomson, NR; (2018) Morphological, genomic and transcriptomic responses of Klebsiella pneumoniae to the last-line antibiotic colistin. Scientific reports, 8 (1). p. 9868. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-28199-y

Ingle, DJ; Levine, MM; Kotloff, KL; Holt, KE; Robins-Browne, RM; (2018) Dynamics of antimicrobial resistance in intestinal Escherichia coli from children in community settings in South Asia and sub-Saharan Africa. Nature microbiology. ISSN 2058-5276 DOI: https://doi.org/10.1038/s41564-018-0217-4

Lam, MMC; Wyres, KL; Judd, LM; Wick, RR; Jenney, A; Brisse, S; Holt, KE; (2018) Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae. Genome medicine, 10 (1). p. 77. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-018-0587-5

M C Lam, M; Wyres, KL; Duchêne, S; Wick, RR; Judd, LM; Gan, YH; Hoh, CH; Archuleta, S; Molton, JS; Kalimuddin, S; +4 more... Koh, TH; Passet, V; Brisse, S; Holt, KE; (2018) Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination. Nature communications, 9 (1). p. 2703. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-018-05114-7

Mostowy, RJ; Holt, KE; (2018) Diversity-Generating Machines: Genetics of Bacterial Sugar-Coating. Trends in microbiology. ISSN 0966-842X DOI: https://doi.org/10.1016/j.tim.2018.06.006

Teo, SM; Tang, HHF; Mok, D; Judd, LM; Watts, SC; Pham, K; Holt, BJ; Kusel, M; Serralha, M; Troy, N; +9 more... Bochkov, YA; Grindle, K; Lemanske, RFJr; Johnston, SL; Gern, JE; Sly, PD; Holt, PG; Holt, KE; Inouye, M; (2018) Airway Microbiota Dynamics Uncover a Critical Window for Interplay of Pathogenic Bacteria and Allergy in Childhood Respiratory Disease. Cell host & microbe, 24 (3). 341-352.e5. ISSN 1931-3128 DOI: https://doi.org/10.1016/j.chom.2018.08.005