All parts of the WHO Mycobacterium tuberculosis mutation catalog need to be applied when evaluating its performance.

Sacha Laurent ORCID logo ; Jody E Phelan ORCID logo ; Leonid Chindelevitch ORCID logo ; Timothy M Walker ORCID logo ; Daniela M Cirillo ORCID logo ; Anita Suresh ORCID logo ; Timothy C Rodwell ORCID logo ; Paolo Miotto ORCID logo ; Claudio U Köser ORCID logo ; (2025) All parts of the WHO Mycobacterium tuberculosis mutation catalog need to be applied when evaluating its performance. Microbiology spectrum, 13 (5). e0215724. ISSN 2165-0497 DOI: 10.1128/spectrum.02157-24
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A limitation of the World Health Organization (WHO) mutation catalog, a global reference for genotypic antimicrobial susceptibility testing for Mycobacterium tuberculosis complex, is that it was derived and tested using the same data set, which may result in overfitting (1–4). Therefore, we welcome the effort by He et al. to assess the performance of both version 1 (V1) and version 2 (V2) catalog using an independent data set from China (5). However, we have concerns about how this was carried out.


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