Approximate Bayesian Computation and Simulation-Based Inference for Complex Stochastic Epidemic Models
Trevelyan J
McKinley
;
Ian
Vernon
;
Ioannis
Andrianakis
;
Nicky
McCreesh
;
Jeremy E
Oakley
;
Rebecca N
Nsubuga
;
Michael
Goldstein
;
Richard G
White
;
(2017)
Approximate Bayesian Computation and Simulation-Based Inference for Complex Stochastic Epidemic Models.
Statistical science, 33 (1).
pp. 4-18.
ISSN 0883-4237
DOI: 10.1214/17-sts618
Approximate Bayesian Computation (ABC) and other simulationbased inference methods are becoming increasingly used for inference in complex systems, due to their relative ease-of-implementation. We briefly review some of the more popular variants of ABC and their application in epidemiology, before using a real-world model of HIV transmission to illustrate some of challenges when applying ABC methods to high-dimensional, computationally intensive models.We then discuss an alternative approach- history matching-that aims to address some of these issues, and conclude with a comparison between these different methodologies.
Item Type | Article |
---|---|
Official URL | http://www.imstat.org/sts/future_papers.html |
Date Deposited | 18 Jan 2018 02:21 |
ORCID: https://orcid.org/0000-0003-1409-8531
ORCID: https://orcid.org/0000-0003-4410-6635