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Cavany, SM; (2019) Using data analysis and mathematical modelling to study tuberculosis contact tracing in London, with reference to the national strategy and guidance. PhD (research paper style) thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04652175

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Engström, Anna; Antonenka, Uladzimir; Kadyrov, Abdylat; Kalmambetova, Gulmira; Kranzer, Katharina; Merker, Matthias; Kabirov, Olim; Parpieva, Nargiza; Rajabov, Asliddin; Sahalchyk, Evgeni; +3 more... Sayfudtinov, Zayniddin; Niemann, Stefan; Hoffmann, Harald; (2019) Population structure of drug-resistant Mycobacterium tuberculosis in Central Asia. BMC infectious diseases, 19 (1). 908-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-019-4480-7

Escombe, A Roderick; Ticona, Eduardo; Chávez-Pérez, Víctor; Espinoza, Manuel; Moore, David AJ; (2019) Improving natural ventilation in hospital waiting and consulting rooms to reduce nosocomial tuberculosis transmission risk in a low resource setting. BMC infectious diseases, 19 (1). 88-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-019-3717-9

Evangelopoulos, Dimitrios; Prosser, Gareth A; Rodgers, Angela; Dagg, Belinda M; Khatri, Bhagwati; Ho, Mei Mei; Gutierrez, Maximiliano G; Cortes, Teresa; de Carvalho, Luiz Pedro S; (2019) Comparative fitness analysis of D-cycloserine resistant mutants reveals both fitness-neutral and high-fitness cost genotypes. Nature communications, 10 (1). 4177-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-019-12074-z

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Gaskell, Katherine M; Allen, Rhiannon; Moore, David AJ; (2019) Exposed! Management of MDR-TB household contacts in an evidence light era. International Journal of Infectious Diseases, 80S. S13-S16. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2019.02.037

Gebremicael, Gebremedhin; Kassa, Desta; Alemayehu, Yodit; Gebreegziaxier, Atsbeha; Kassahun, Yonas; van Baarle, Debbie; H M Ottenhoff, Tom; M Cliff, Jacqueline; C Haks, Mariëlle; (2019) Gene expression profiles classifying clinical stages of tuberculosis and monitoring treatment responses in Ethiopian HIV-negative and HIV-positive cohorts. PloS one, 14 (12). e0226137-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0226137

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Grant, Alison D; Charalambous, Salome; Tlali, Mpho; Karat, Aaron S; Dorman, Susan E; Hoffmann, Christopher J; Johnson, Suzanne; Vassall, Anna; Churchyard, Gavin J; Fielding, Katherine L; (2019) Algorithm-guided empirical tuberculosis treatment for people with advanced HIV (TB Fast Track): an open-label, cluster-randomised trial. The Lancet HIV, 7 (1). e27-e37. ISSN 2352-3018 DOI: https://doi.org/10.1016/S2352-3018(19)30266-8

Gröschel, Matthias I; Luz, Christian F; Batra, Sonali; Ahuja, Sandeep; Batra, Shelly; Kranzer, Katharina; van der Werf, Tjip S; (2019) Random glucose sampling as screening tool for diabetes among disadvantaged tuberculosis patients residing in urban slums in India. ERJ open research, 5 (1). 00025-2019. ISSN 2312-0541 DOI: https://doi.org/10.1183/23120541.00025-2019

Hanifa, Y; Toro Silva, S; Karstaedt, A; Sahid, F; Charalambous, S; Chihota, VN; Churchyard, GJ; von Gottberg, A; McCarthy, K; Nicol, MP; +4 more... Ndlovu, NT; Stevens, W; Fielding, KL; Grant, AD; (2019) What causes symptoms suggestive of tuberculosis in HIV-positive people with negative initial investigations? INTERNATIONAL JOURNAL OF TUBERCULOSIS AND LUNG DISEASE, 23 (2). pp. 157-165. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.18.0251

Harris, Rebecca C; Sumner, Tom; Knight, Gwenan M; Evans, Tom; Cardenas, Vicky; Chen, Chen; White, Richard G; (2019) Age-targeted tuberculosis vaccination in China and implications for vaccine development: a modelling study. The Lancet Global Health, 7 (2). e209-e218. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(18)30452-2

Hippner, Piotr; Sumner, Tom; Houben, Rein Mgj; Cardenas, Vicky; Vassall, Anna; Bozzani, Fiammetta; Mudzengi, Don; Mvusi, Lindiwe; Churchyard, Gavin; White, Richard G; (2019) Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa. PloS one, 14 (1). e0209320-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0209320

Homolka, Susanne; Zallet, Julia; Albert, Heidi; Witt, Anne-Kathrin; Kranzer, Katharina; (2019) Introduction of quality management in a National Reference Laboratory in Germany. PloS one, 14 (10). e0222925-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0222925

Houben, Rein MGJ; Esmail, Hanif; Emery, Jon C; Joslyn, Louis R; McQuaid, C Finn; Menzies, Nicolas A; Sanz, Joaquín; Shrestha, Sourya; White, Richard G; Yang, Chongguang; +1 more... Cobelens, Frank; (2019) Spotting the old foe-revisiting the case definition for TB. Lancet Respiratory Medicine, 7 (3). pp. 199-201. ISSN 2213-2600 DOI: https://doi.org/10.1016/S2213-2600(19)30038-4

Huangfu, P; Laurence, YV; Alisjahbana, B; Ugarte-Gil, C; Riza, A-L; Walzl, G; Ruslami, R; Moore, DAJ; Ioana, M; McAllister, S; +12 more... Ronacher, K; Koesoemadinata, RC; Grint, D; Kerry, S; Coronel, J; Malherbe, ST; Griffiths, U; Dockrell, HM; Hill, PC; van Crevel, R; Pearson, F; Critchley, JA; (2019) Point of care HbA1c level for diabetes mellitus management and its accuracy among tuberculosis patients: a study in four countries. INTERNATIONAL JOURNAL OF TUBERCULOSIS AND LUNG DISEASE, 23 (3). pp. 283-292. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.18.0359

Hur, Yun Gyoung; Hong, Ji Young; Choi, Dong Hwan; Kim, Ahreum; Park, So Yeong; Kwon, Minsuk; Kang, Kyungjoon; Lee, Jeong Min; Dockrell, Hazel M; Lee, Yoonsuk; +2 more... Joo, Hoodon; Cho, Sang Nae; (2019) A Feasibility Study for Diagnosis of Latent Tuberculosis Infection Using an IGRA Point-of-Care Platform in South Korea. Yonsei medical journal, 60 (4). pp. 375-380. ISSN 0513-5796 DOI: https://doi.org/10.3349/ymj.2019.60.4.375

Jayasooriya, S; Jobe, A; Badjie, S; Owolabi, O; Rachow, A; Sutherland, J; Kampmann, B; (2019) The burden of non-TB lung disease presenting to TB clinics in The Gambia: preliminary data in the Xpert® MTB/Rif era. PUBLIC HEALTH ACTION, 9 (4). pp. 166-168. ISSN 2220-8372 DOI: https://doi.org/10.5588/pha.19.0046

Karat, AS; Omar, T; Tlali, M; Charalambous, S; Chihota, VN; Churchyard, GJ; Fielding, KL; Martinson, NA; McCarthy, KM; Grant, AD; (2019) Lessons learnt conducting minimally invasive autopsies in private mortuaries as part of HIV and tuberculosis research in South Africa. Public Health Action, 9 (4). pp. 186-190. ISSN 2220-8372 DOI: https://doi.org/10.5588/pha.19.0032

Khan, Palwasha Y; Yates, Tom A; Osman, Muhammad; Warren, Robin M; van der Heijden, Yuri; Padayatchi, Nesri; Nardell, Edward A; Moore, David; Mathema, Barun; Gandhi, Neel; +6 more... Eldholm, Vegard; Dheda, Keertan; Hesseling, Anneke C; Mizrahi, Valerie; Rustomjee, Roxana; Pym, Alexander; (2019) Transmission of drug-resistant tuberculosis in HIV-endemic settings. LANCET INFECTIOUS DISEASES, 19 (3). e77-e88. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(18)30537-1

Knight, Gwenan M; McQuaid, C Finn; Dodd, Peter J; Houben, Rein MGJ; (2019) Global burden of latent multidrug-resistant tuberculosis: trends and estimates based on mathematical modelling. Lancet Infectious Diseases, 19 (8). pp. 903-912. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(19)30307-X

Kranzer, Katharina; Kalsdorf, Barbara; Heyckendorf, Jan; Andres, Sönke; Merker, Matthias; Hofmann-Thiel, Sabine; Bloemberg, Guido V; Hoffmann, Harald; Niemann, Stefan; Lange, Christoph; +1 more... Maurer, Florian P; (2019) New World Health Organization Treatment Recommendations for Multidrug-Resistant Tuberculosis: Are We Well Enough Prepared? American journal of respiratory and critical care medicine, 200 (4). pp. 514-515. ISSN 1073-449X DOI: https://doi.org/10.1164/rccm.201902-0260LE

Köser, Claudio U; Maurer, Florian P; Kranzer, Katharina; (2019) 'Those who cannot remember the past are condemned to repeat it': Drug-susceptibility testing for bedaquiline and delamanid. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES, 80S. S32-S35. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2019.02.027

Lachmandas, Ekta; Eckold, Clare; Böhme, Julia; Koeken, Valerie ACM; Marzuki, Mardiana Binte; Blok, Bastiaan; Arts, Rob JW; Chen, Jinmiao; Teng, Karen WW; Ratter, Jacqueline; +9 more... Smolders, Elise J; Van den Heuvel, Corina; Stienstra, Rinke; Dockrell, Hazel M; Newell, Evan; Netea, Mihai G; Singhal, Amit; Cliff, Jacqueline M; Van Crevel, Reinout; (2019) Metformin Alters Human Host Responses to Mycobacterium tuberculosis in Healthy Subjects. The Journal of infectious diseases, 220 (1). pp. 139-150. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiz064

Lee, Hyejon; Kim, Jungho; Kang, Young Ae; Kim, Deok Ryun; Sim, Bora; Zelmer, Andrea; Fletcher, Helen A; Dockrell, Hazel M; Smith, Steven G; Cho, Sang-Nae; (2019) In vitro Mycobacterial Growth Inhibition in South Korean Adults With Latent TB Infection. Frontiers in Immunology, 10 (APR). 896-. DOI: https://doi.org/10.3389/fimmu.2019.00896

Martinez, Leonardo; Lo, Nathan C; Cords, Olivia; Hill, Philip C; Khan, Palwasha; Hatherill, Mark; Mandalakas, Anna; Kay, Alexander; Croda, Julio; Horsburgh, C Robert; +2 more... Zar, Heather J; Andrews, Jason R; (2019) Paediatric tuberculosis transmission outside the household: challenging historical paradigms to inform future public health strategies. LANCET RESPIRATORY MEDICINE, 7 (6). pp. 544-552. ISSN 2213-2600 DOI: https://doi.org/10.1016/S2213-2600(19)30137-7

Medawar, Lydia; Tukiman, Hatimi Mohd; Mbayo, Georgetta; Donkor, Simon; Owolabi, Olumuyiwa; Sutherland, Jayne S; (2019) Analysis of cellular and soluble profiles in QuantiFERON nonconverters, converters, and reverters in the Gambia. Immunity, inflammation and disease, 7 (4). pp. 260-270. ISSN 2050-4527 DOI: https://doi.org/10.1002/iid3.269

Mendy, Joseph; Jarju, Sheikh; Heslop, Rhiannon; Bojang, Adama L; Kampmann, Beate; Sutherland, Jayne S; (2019) Changes in Mycobacterium tuberculosis-Specific Immunity With Influenza co-infection at Time of TB Diagnosis. FRONTIERS IN IMMUNOLOGY, 9 (JAN). 3093-. ISSN 1664-3224 DOI: https://doi.org/10.3389/fimmu.2018.03093

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Neill, Lorna; Checkley, Anna M; Benjamin, Laura A; Herdman, M Trent; Carter, Daniel P; Pullan, Steven T; Aarons, Emma; Griffiths, Katie; Monaghan, Bernadette; Karunaratne, Kushan; +4 more... Ciccarelli, Olga; Spillane, Jennifer; Moore, David AJ; Kullmann, Dimitri M; (2019) Rhombencephalitis and Myeloradiculitis Caused by a European Subtype of Tick-Borne Encephalitis Virus. Emerging infectious diseases, 25 (12). pp. 2317-2319. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2512.191017

Noguera-Julian, Antoni; Calzada-Hernández, Joan; Brinkmann, Folke; Basu Roy, Robindra; Bilogortseva, Olga; Buettcher, Michael; Carvalho, Isabel; Chechenyeva, Vira; Falcón, Lola; Goetzinger, Florian; +11 more... Guerrero-Laleona, Carmelo; Hoffmann, Peter; Jelusic, Marija; Niehues, Tim; Ozere, Iveta; Shackley, Fiona; Suciliene, Elena; Welch, Steven B; Schölvinck, Elisabeth H; Ritz, Nicole; Tebruegge, Marc; (2019) Tuberculosis Disease in Children and Adolescents on Therapy With Antitumor Necrosis Factor-ɑ Agents: A Collaborative, Multicenter Paediatric Tuberculosis Network European Trials Group (ptbnet) Study. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 71 (10). pp. 2561-2569. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciz1138

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Penn-Nicholson, Adam; Hraha, Thomas; Thompson, Ethan G; Sterling, David; Mbandi, Stanley Kimbung; Wall, Kirsten M; Fisher, Michelle; Suliman, Sara; Shankar, Smitha; Hanekom, Willem A; +10 more... Janjic, Nebojsa; Hatherill, Mark; Kaufmann, Stefan HE; Sutherland, Jayne; Walzl, Gerhard; De Groote, Mary Ann; Ochsner, Urs; Zak, Daniel E; Scriba, Thomas J; ACS and GC6–74 cohort study groups; (2019) Discovery and validation of a prognostic proteomic signature for tuberculosis progression: A prospective cohort study. PLoS medicine, 16 (4). e1002781-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1002781

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Polsfuss, Silke; Hofmann-Thiel, Sabine; Merker, Matthias; Krieger, David; Niemann, Stefan; Rüssmann, Holger; Schönfeld, Nicolas; Hoffmann, Harald; Kranzer, Katharina; (2019) Emergence of Low-level Delamanid and Bedaquiline Resistance During Extremely Drug-resistant Tuberculosis Treatment. CLINICAL INFECTIOUS DISEASES, 69 (7). pp. 1229-1231. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciz074

Rachow, Andrea; Ivanova, Olena; Wallis, Robert; Charalambous, Salome; Jani, Ilesh; Bhatt, Nilesh; Kampmann, Beate; Sutherland, Jayne; Ntinginya, Nyanda E; Evans, Denise; +7 more... Lönnroth, Knut; Niemann, Stefan; Schaible, Ulrich E; Geldmacher, Christof; Sanne, Ian; Hoelscher, Michael; Churchyard, Gavin; (2019) TB sequel: incidence, pathogenesis and risk factors of long-term medical and social sequelae of pulmonary TB - a study protocol. BMC PULMONARY MEDICINE, 19 (1). 4-. ISSN 1471-2466 DOI: https://doi.org/10.1186/s12890-018-0777-3

Ronacher, Katharina; Chegou, Novel N; Kleynhans, Léanie; Djoba Siawaya, Joel F; du Plessis, Nelita; Loxton, André G; Maasdorp, Elizna; Tromp, Gerard; Kidd, Martin; Stanley, Kim; +15 more... Kriel, Magdalena; Menezes, Angela; Gutschmidt, Andrea; van der Spuy, Gian D; Warren, Robin M; Dietze, Reynaldo; Okwera, Alphonse; Thiel, Bonnie; Belisle, John T; Cliff, Jacqueline M; Boom, W Henry; Johnson, John L; van Helden, Paul D; Dockrell, Hazel M; Walzl, Gerhard; (2019) Distinct serum biosignatures are associated with different tuberculosis treatment outcomes. Tuberculosis, 118. 101859-. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2019.101859

Ruesen, Carolien; Chaidir, Lidya; Ugarte-Gil, Cesar; van Ingen, Jakko; Critchley, Julia A; Hill, Philip C; Ruslami, Rovina; Santoso, Prayudi; Huynen, Martijn A; Dockrell, Hazel M; +3 more... Moore, David AJ; Alisjahbana, Bachti; van Crevel, Reinout; (2019) Diabetes is associated with genotypically drug-resistant tuberculosis. The European respiratory journal, 55 (3). p. 1901891. ISSN 0903-1936 DOI: https://doi.org/10.1183/13993003.01891-2019

Snow, Kathryn J; Cruz, Andrea T; Seddon, James A; Ferrand, Rashida A; Chiang, Silvia S; Hughes, Jennifer A; Kampmann, Beate; Graham, Steve M; Dodd, Peter J; Houben, Rein M; +3 more... Denholm, Justin T; Sawyer, Susan M; Kranzer, Katharina; (2019) Adolescent tuberculosis. The Lancet Child & Adolescent Health, 4 (1). pp. 68-79. ISSN 2352-4642 DOI: https://doi.org/10.1016/S2352-4642(19)30337-2

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Stockdale, L; (2019) Investigation of immune correlates, and impact of human cytomegalovirus and immune activation, on tuberculosis disease risk. PhD (research paper style) thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04652176

Sumner, Thomas; Bozzani, Fiammetta; Mudzengi, Don; Hippner, Piotr; Houben, Rein M; Cardenas, Vicky; Vassall, Anna; White, Richard G; (2019) Estimating the Impact of Tuberculosis Case Detection in Constrained Health Systems: An Example of Case-Finding in South Africa. American Journal of Epidemiology, 188 (6). pp. 1155-1164. ISSN 0002-9262 DOI: https://doi.org/10.1093/aje/kwz038

Sumner, Thomas; Bozzani, Fiammetta; Mudzengi, Don; Hippner, Piotr; Houben, Rein M; Cardenas, Vicky; Vassall, Anna; White, Richard G; (2019) Estimating the Impact of Tuberculosis Case Detection in Constrained Health Systems: An Example of Case-Finding in South Africa. American journal of epidemiology, 188 (6). pp. 1155-1164. ISSN 0002-9262 DOI: https://doi.org/10.1093/aje/kwz038

Sumner, Tom; Scriba, Thomas J; Penn-Nicholson, Adam; Hatherill, Mark; White, Richard G; (2019) Potential population level impact on tuberculosis incidence of using an mRNA expression signature correlate-of-risk test to target tuberculosis preventive therapy. Scientific Reports, 9 (1). 11126-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-019-47645-z

Tomita, Andrew; Smith, Catherine M; Lessells, Richard J; Pym, Alexander; Grant, Alison D; de Oliveira, Tulio; Tanser, Frank; (2019) Space-time clustering of recently-diagnosed tuberculosis and impact of ART scale-up: Evidence from an HIV hyper-endemic rural South African population. Scientific Reports, 9 (1). 10724-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-019-46455-7

Ugarte-Gil, Cesar; Alisjahbana, Bachti; Ronacher, Katharina; Riza, Anca Lelia; Koesoemadinata, Raspati C; Malherbe, Stephanus T; Cioboata, Ramona; Llontop, Juan Carlos; Kleynhans, Leanie; Lopez, Sonia; +13 more... Santoso, Prayudi; Marius, Ciontea; Villaizan, Katerine; Ruslami, Rovina; Walzl, Gerhard; Panduru, Nicolae Mircea; Dockrell, Hazel M; Hill, Philip C; Mc Allister, Susan; Pearson, Fiona; Moore, David AJ; Critchley, Julia A; van Crevel, Reinout; (2019) Diabetes Mellitus Among Pulmonary Tuberculosis Patients From 4 Tuberculosis-endemic Countries: The TANDEM Study. Clinical infectious diseases, 70 (5). pp. 780-788. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciz284

Weiner, January; Domaszewska, Teresa; Donkor, Simon; Kaufmann, Stefan HE; Hill, Philip C; Sutherland, Jayne S; (2019) Changes in Transcript, Metabolite, and Antibody Reactivity During the Early Protective Immune Response in Humans to Mycobacterium tuberculosis Infection. Clinical infectious diseases, 71 (1). pp. 30-40. ISSN 1537-6591 DOI: https://doi.org/10.1093/cid/ciz785

Yang, Yang; Walker, Timothy M; Walker, A Sarah; Wilson, Daniel J; Peto, Timothy EA; Crook, Derrick W; Shamout, Farah; CRyPTIC Consortium; Zhu, Tingting; Clifton, David A; (2019) DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis. BIOINFORMATICS, 35 (18). pp. 3240-3249. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/btz067