Items where Faculty or Department is "Faculty of Infectious and Tropical Diseases > Department of Infection Biology > Dept of Pathogen Molecular Biology (-2019)"

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Number of items: 201.

A

Abdallah, Abdallah M; Hill-Cawthorne, Grant A; Otto, Thomas D; Coll, Francesc; Guerra-Assunção, José Afonso; Gao, Ge; Naeem, Raeece; Ansari, Hifzur; Malas, Tareq B; Adroub, Sabir A; +10 more... Verboom, Theo; Ummels, Roy; Zhang, Huoming; Panigrahi, Aswini Kumar; McNerney, Ruth; Brosch, Roland; Clark, Taane G; Behr, Marcel A; Bitter, Wilbert; Pain, Arnab; (2015) Genomic expression catalogue of a global collection of BCG vaccine strains show evidence for highly diverged metabolic and cell-wall adaptations. Scientific reports, 5 (1). 15443-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep15443
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Abu-Madi, Marawan; Aly, Mahmoud; Behnke, Jerzy M; Clark, C Graham; Balkhy, Hanan; (2015) The distribution of Blastocystis subtypes in isolates from Qatar. Parasites & vectors, 8 (1). 465-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-015-1071-3
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Ahmed, Hashim U; Dickinson, Louise; Charman, Susan; Weir, Shraddha; McCartan, Neil; Hindley, Richard G; Freeman, Alex; Kirkham, Alex P; Sahu, Mahua; Scott, Rebecca; +3 more... Allen, Clare; Van der Meulen, Jan; Emberton, Mark; (2015) Focal Ablation Targeted to the Index Lesion in Multifocal Localised Prostate Cancer: a Prospective Development Study. European urology, 68 (6). pp. 927-936. ISSN 0302-2838 DOI: https://doi.org/10.1016/j.eururo.2015.01.030 Full text not available from this repository.

Alam, Mahmood M; Solyakov, Lev; Bottrill, Andrew R; Flueck, Christian; Siddiqui, Faiza A; Singh, Shailja; Mistry, Sharad; Viskaduraki, Maria; Lee, Kate; Hopp, Christine S; +7 more... Chitnis, Chetan E; Doerig, Christian; Moon, Robert W; Green, Judith L; Holder, Anthony A; Baker, David A; Tobin, Andrew B; (2015) Phosphoproteomics reveals malaria parasite Protein Kinase G as a signalling hub regulating egress and invasion. Nature communications, 6 (1). 7285-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms8285
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Ali, Asho; Hasan, Zahra; McNerney, Ruth; Mallard, Kim; Hill-Cawthorne, Grant; Coll, Francesc; Nair, Mridul; Pain, Arnab; Clark, Taane G; Hasan, Rumina; (2015) Whole genome sequencing based characterization of extensively drug-resistant Mycobacterium tuberculosis isolates from Pakistan. PloS one, 10 (2). e0117771-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0117771
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Alsford, Sam; (2015) Subverting lysosomal function in Trypanosoma brucei. Microbial cell (Graz, Austria), 2 (8). pp. 259-261. ISSN 2311-2638 DOI: https://doi.org/10.15698/mic2015.08.222
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Anders, Katherine L; Thompson, Corinne N; Thuy, Nguyen Thi Van; Nguyet, Nguyen Minh; Tu, Le Thi Phuong; Dung, Tran Thi Ngoc; Phat, Voong Vinh; Van, Nguyen Thi Hong; Hieu, Nguyen Trong; Tham, Nguyen Thi Hong; +5 more... Ha, Phan Thi Thanh; Lien, Le Bich; Chau, Nguyen Van Vinh; Baker, Stephen; Simmons, Cameron P; (2015) The epidemiology and aetiology of diarrhoeal disease in infancy in southern Vietnam: a birth cohort study. International journal of infectious diseases, 35. pp. 3-10. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2015.03.013
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Assefa, Samuel; Lim, Caeul; Preston, Mark D; Duffy, Craig W; Nair, Mridul B; Adroub, Sabir A; Kadir, Khamisah A; Goldberg, Jonathan M; Neafsey, Daniel E; Divis, Paul; +5 more... Clark, Taane G; Duraisingh, Manoj T; Conway, David J; Pain, Arnab; Singh, Balbir; (2015) Population genomic structure and adaptation in the zoonotic malaria parasite Plasmodium knowlesi. Proceedings of the National Academy of Sciences of the United States of America, 112 (42). pp. 13027-13032. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1509534112
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Atchison, Christina J; Stowe, Julia; Andrews, Nick; Collins, Sarah; Allen, David J; Nawaz, Sameena; Brown, David; Ramsay, Mary E; Ladhani, Shamez N; (2015) Rapid Declines in Age Group-Specific Rotavirus Infection and Acute Gastroenteritis Among Vaccinated and Unvaccinated Individuals Within 1 Year of Rotavirus Vaccine Introduction in England and Wales. The Journal of infectious diseases, 213 (2). pp. 243-249. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiv398 Full text not available from this repository.

B

Baig, Abiyad; Weinert, Lucy A; Peters, Sarah E; Howell, Kate J; Chaudhuri, Roy R; Wang, Jinhong; Holden, Matthew TG; Parkhill, Julian; Langford, Paul R; Rycroft, Andrew N; +3 more... Wren, Brendan W; Tucker, Alexander W; Maskell, Duncan J; (2015) Whole genome investigation of a divergent clade of the pathogen Streptococcus suis. Frontiers in microbiology, 6 (NOV). 1191-. ISSN 1664-302X DOI: https://doi.org/10.3389/fmicb.2015.01191
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Baines, Sarah L; Holt, Kathryn E; Schultz, Mark B; Seemann, Torsten; Howden, Brian O; Jensen, Slade O; van Hal, Sebastiaan J; Coombs, Geoffrey W; Firth, Neville; Powell, David R; +2 more... Stinear, Timothy P; Howden, Benjamin P; (2015) Convergent adaptation in the dominant global hospital clone ST239 of methicillin-resistant Staphylococcus aureus. MBIO, 6 (2). e00080-. ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.00080-15
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Baker, Kate S; Burnett, Edward; McGregor, Hannah; Deheer-Graham, Ana; Boinett, Christine; Langridge, Gemma C; Wailan, Alexander M; Cain, Amy K; Thomson, Nicholas R; Russell, Julie E; +1 more... Parkhill, Julian; (2015) The Murray collection of pre-antibiotic era Enterobacteriacae: a unique research resource. Genome medicine, 7 (1). 97-. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-015-0222-7
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Baker, Kate S; Dallman, Timothy J; Ashton, Philip M; Day, Martin; Hughes, Gwenda; Crook, Paul D; Gilbart, Victoria L; Zittermann, Sandra; Allen, Vanessa G; Howden, Benjamin P; +19 more... Tomita, Takehiro; Valcanis, Mary; Harris, Simon R; Connor, Thomas R; Sintchenko, Vitali; Howard, Peter; Brown, Jeremy D; Petty, Nicola K; Gouali, Malika; Thanh, Duy Pham; Keddy, Karen H; Smith, Anthony M; Talukder, Kaisar A; Faruque, Shah M; Parkhill, Julian; Baker, Stephen; Weill, François-Xavier; Jenkins, Claire; Thomson, Nicholas R; (2015) Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study. The Lancet infectious diseases, 15 (8). pp. 913-921. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(15)00002-X Full text not available from this repository.

Baker, Stephen; (2015) Infectious disease. A return to the pre-antimicrobial era? Science (New York, NY), 347 (6226). pp. 1064-1066. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.aaa2868 Full text not available from this repository.

Baltazar, Murielle; Ngandjio, Antoinette; Holt, Kathryn Elizabeth; Lepillet, Elodie; Pardos de la Gandara, Maria; Collard, Jean-Marc; Bercion, Raymond; Nzouankeu, Ariane; Le Hello, Simon; Dougan, Gordon; +2 more... Fonkoua, Marie-Christine; Weill, François-Xavier; (2015) Multidrug-resistant Salmonella enterica serotype Typhi, Gulf of Guinea Region, Africa. EMERGING INFECTIOUS DISEASES, 21 (4). pp. 655-659. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2104.141355
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Bhattacharyya, Tapan; Mills, Emily A; Jansen, Ana Maria; Miles, Michael A; (2015) Prospects for T. cruzi lineage-specific serological surveillance of wild mammals. Acta tropica, 151 (1). pp. 182-186. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2015.06.017 Full text not available from this repository.

Bossé, Janine T; Li, Yanwen; Atherton, Tom G; Walker, Stephanie; Williamson, Susanna M; Rogers, Jon; Chaudhuri, Roy R; Weinert, Lucy A; Holden, Matthew TG; Maskell, Duncan J; +4 more... Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; (2015) Corrigendum to ‘Characterisation of a mobilisable plasmid conferring florfenicol and chloramphenicol resistance in Actinobacillus pleuropneumoniae’ [Veterinary Microbiology 178 (2015) 279–282]. Veterinary microbiology, 179 (3-4). p. 341. ISSN 0378-1135 DOI: https://doi.org/10.1016/j.vetmic.2015.07.002 Full text not available from this repository.

Bossé, Janine T; Li, Yanwen; Atherton, Tom G; Walker, Stephanie; Williamson, Susanna M; Rogers, Jon; Chaudhuri, Roy R; Weinert, Lucy A; Holden, Matthew TG; Maskell, Duncan J; +5 more... Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; BRaDP1T consortium; (2015) Characterisation of a mobilisable plasmid conferring florfenicol and chloramphenicol resistance in Actinobacillus pleuropneumoniae. Veterinary microbiology, 178 (3-4). pp. 279-282. ISSN 0378-1135 DOI: https://doi.org/10.1016/j.vetmic.2015.05.020
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Bossé, Janine T; Li, Yanwen; Walker, Stephanie; Atherton, Tom; Fernandez Crespo, Roberto; Williamson, Susanna M; Rogers, Jon; Chaudhuri, Roy R; Weinert, Lucy A; Oshota, Olusegun; +7 more... Holden, Matt TG; Maskell, Duncan J; Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; BRaDP1T Consortium; (2015) Identification of dfrA14 in two distinct plasmids conferring trimethoprim resistance in Actinobacillus pleuropneumoniae. The Journal of antimicrobial chemotherapy, 70 (8). pp. 2217-2222. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkv121
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Bottai, Daria; Frigui, Wafa; Clark, Simon; Rayner, Emma; Zelmer, Andrea; Andreu, Nuria; de Jonge, Marien I; Bancroft, Gregory J; Williams, Ann; Brodin, Priscille; +1 more... Brosch, Roland; (2015) Increased protective efficacy of recombinant BCG strains expressing virulence-neutral proteins of the ESX-1 secretion system. Vaccine, 33 (23). pp. 2710-2718. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2015.03.083 Full text not available from this repository.

Bowyer, Paul W; Stewart, Lindsay B; Aspeling-Jones, Harvey; Mensah-Brown, Henrietta E; Ahouidi, Ambroise D; Amambua-Ngwa, Alfred; Awandare, Gordon A; Conway, David J; (2015) Variation in Plasmodium falciparum erythrocyte invasion phenotypes and merozoite ligand gene expression across different populations in areas of malaria endemicity. Infection and immunity, 83 (6). pp. 2575-2582. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.03009-14 Full text not available from this repository.

Boyle, Michelle J; Reiling, Linda; Feng, Gaoqian; Langer, Christine; Osier, Faith H; Aspeling-Jones, Harvey; Cheng, Yik Sheng; Stubbs, Janine; Tetteh, Kevin KA; Conway, David J; +5 more... McCarthy, James S; Muller, Ivo; Marsh, Kevin; Anders, Robin F; Beeson, James G; (2015) Human antibodies fix complement to inhibit Plasmodium falciparum invasion of erythrocytes and are associated with protection against malaria. Immunity, 42 (3). pp. 580-590. ISSN 1074-7613 DOI: https://doi.org/10.1016/j.immuni.2015.02.012
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Burza, S; Mahajan, R; Marino, E; Sunyoto, T; Shandilya, C; Tabrez, M; Kumar, K; Jha, A; Mathew, P; Salse, N; +2 more... Casademont, C; Mishra, NK; (2015) Seasonal effect and long-term nutritional status following exit from a Community-Based Management of Severe Acute Malnutrition program in Bihar, India. European journal of clinical nutrition, 70 (4). pp. 437-444. ISSN 0954-3007 DOI: https://doi.org/10.1038/ejcn.2015.140
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Burza, Sakib; Mahajan, Raman; Marino, Elisa; Sunyoto, Temmy; Shandilya, Chandra; Tabrez, Mohammad; Kumari, Kabita; Mathew, Prince; Jha, Amar; Salse, Nuria; +1 more... Mishra, Kripa Nath; (2015) Community-based management of severe acute malnutrition in India: new evidence from Bihar. The American journal of clinical nutrition, 101 (4). pp. 847-859. ISSN 0002-9165 DOI: https://doi.org/10.3945/ajcn.114.093294
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Butt, Aaron; Halliday, Nigel; Williams, Paul; Atkins, Helen S; Bancroft, Gregory J; Titball, Richard W; (2015) Burkholderia pseudomallei kynB plays a role in AQ production, biofilm formation, bacterial swarming and persistence. Research in microbiology, 167 (3). pp. 159-167. ISSN 0923-2508 DOI: https://doi.org/10.1016/j.resmic.2015.11.002 Full text not available from this repository.

C

Carnes, Jason; Anupama, Atashi; Balmer, Oliver; Jackson, Andrew; Lewis, Michael; Brown, Rob; Cestari, Igor; Desquesnes, Marc; Gendrin, Claire; Hertz-Fowler, Christiane; +17 more... Imamura, Hideo; Ivens, Alasdair; Kořený, Luděk; Lai, De-Hua; MacLeod, Annette; McDermott, Suzanne M; Merritt, Chris; Monnerat, Severine; Moon, Wonjong; Myler, Peter; Phan, Isabelle; Ramasamy, Gowthaman; Sivam, Dhileep; Lun, Zhao-Rong; Lukeš, Julius; Stuart, Ken; Schnaufer, Achim; (2015) Genome and phylogenetic analyses of Trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty. PLoS neglected tropical diseases, 9 (1). e3404-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003404
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Carrique-Mas, Juan J; Tue, Ngo T; Bryant, Juliet E; Saylors, Karen; Cuong, Nguyen V; Hoa, Ngo T; An, Nguyen N; Hien, Vo B; Lao, Pham V; Tu, Nguyen C; +13 more... Chuyen, Nguyen K; Chuc, Nguyen TK; Tan, Dinh V; Duong, Hoang Van V; Toan, Tran K; Chi, Nguyen TY; Campbell, James; Rabaa, Maia A; Nadjm, Behzad; Woolhouse, Mark; Wertheim, Heiman; Thwaites, Guy; Baker, Stephen; (2015) The baseline characteristics and interim analyses of the high-risk sentinel cohort of the Vietnam Initiative on Zoonotic InfectiONS (VIZIONS). Scientific reports, 5 (1). 17965-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep17965
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Cheeseman, Ian H; Miller, Becky; Tan, John C; Tan, Asako; Nair, Shalini; Nkhoma, Standwell C; De Donato, Marcos; Rodulfo, Hectorina; Dondorp, Arjen; Branch, Oralee H; +8 more... Mesia, Lastenia Ruiz; Newton, Paul; Mayxay, Mayfong; Amambua-Ngwa, Alfred; Conway, David J; Nosten, François; Ferdig, Michael T; Anderson, Tim JC; (2015) Population Structure Shapes Copy Number Variation in Malaria Parasites. Molecular biology and evolution, 33 (3). pp. 603-620. ISSN 0737-4038 DOI: https://doi.org/10.1093/molbev/msv282
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Cheng, Ching-Yu; Yamashiro, Kenji; Chen, Li Jia; Ahn, Jeeyun; Huang, Lulin; Huang, Lvzhen; Cheung, Chui Ming G; Miyake, Masahiro; Cackett, Peter D; Yeo, Ian Y; +94 more... Laude, Augustinus; Mathur, Ranjana; Pang, Junxiong; Sim, Kar Seng; Koh, Adrian H; Chen, Peng; Lee, Shu Yen; Wong, Doric; Chan, Choi Mun; Loh, Boon Kwang; Sun, Yaoyao; Davila, Sonia; Nakata, Isao; Nakanishi, Hideo; Akagi-Kurashige, Yumiko; Gotoh, Norimoto; Tsujikawa, Akitaka; Matsuda, Fumihiko; Mori, Keisuke; Yoneya, Shin; Sakurada, Yoichi; Iijima, Hiroyuki; Iida, Tomohiro; Honda, Shigeru; Lai, Timothy Yuk Yau; Tam, Pancy Oi Sin; Chen, Haoyu; Tang, Shibo; Ding, Xiaoyan; Wen, Feng; Lu, Fang; Zhang, Xiongze; Shi, Yi; Zhao, Peiquan; Zhao, Bowen; Sang, Jinghong; Gong, Bo; Dorajoo, Rajkumar; Yuan, Jian-Min; Koh, Woon-Puay; van Dam, Rob M; Friedlander, Yechiel; Lin, Ying; Hibberd, Martin L; Foo, Jia Nee; Wang, Ningli; Wong, Chang Hua; Tan, Gavin S; Park, Sang Jun; Bhargava, Mayuri; Gopal, Lingam; Naing, Thet; Liao, Jiemin; Ong, Peng Guan; Mitchell, Paul; Zhou, Peng; Xie, Xuefeng; Liang, Jinlong; Mei, Junpu; Jin, Xin; Saw, Seang-Mei; Ozaki, Mineo; Mizoguchi, Takanori; Kurimoto, Yasuo; Woo, Se Joon; Chung, Hum; Yu, Hyeong-Gon; Shin, Joo Young; Park, Dong Ho; Kim, In Taek; Chang, Woohyok; Sagong, Min; Lee, Sang-Joon; Kim, Hyun Woong; Lee, Ji Eun; Li, Yi; Liu, Jianjun; Teo, Yik Ying; Heng, Chew Kiat; Lim, Tock Han; Yang, Suk-Kyun; Song, Kyuyoung; Vithana, Eranga N; Aung, Tin; Bei, Jin Xin; Zeng, Yi Xin; Tai, E Shyong; Li, Xiao Xin; Yang, Zhenglin; Park, Kyu-Hyung; Pang, Chi Pui; Yoshimura, Nagahisa; Wong, Tien Yin; Khor, Chiea Chuen; (2015) New loci and coding variants confer risk for age-related macular degeneration in East Asians. Nature communications, 6 (1). 6063-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms7063
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Chertow, Jessica H; Alkaitis, Matthew S; Nardone, Glenn; Ikeda, Allison K; Cunnington, Aubrey J; Okebe, Joseph; Ebonyi, Augustine O; Njie, Madi; Correa, Simon; Jayasooriya, Shamanthi; +5 more... Casals-Pascual, Climent; Billker, Oliver; Conway, David J; Walther, Michael; Ackerman, Hans; (2015) Plasmodium Infection Is Associated with Impaired Hepatic Dimethylarginine Dimethylaminohydrolase Activity and Disruption of Nitric Oxide Synthase Inhibitor/Substrate Homeostasis. PLoS pathogens, 11 (9). e1005119-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1005119
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Chowdhury, Fahima; Mather, Alison E; Begum, Yasmin Ara; Asaduzzaman, Muhammad; Baby, Nabilah; Sharmin, Salma; Biswas, Rajib; Uddin, Muhammad Ikhtear; LaRocque, Regina C; Harris, Jason B; +5 more... Calderwood, Stephen B; Ryan, Edward T; Clemens, John D; Thomson, Nicholas R; Qadri, Firdausi; (2015) Vibrio cholerae Serogroup O139: Isolation from Cholera Patients and Asymptomatic Household Family Members in Bangladesh between 2013 and 2014. PLoS neglected tropical diseases, 9 (11). e0004183-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004183
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Chung The, Hao; Karkey, Abhilasha; Pham Thanh, Duy; Boinett, Christine J; Cain, Amy K; Ellington, Matthew; Baker, Kate S; Dongol, Sabina; Thompson, Corinne; Harris, Simon R; +11 more... Jombart, Thibaut; Le Thi Phuong, Tu; Tran Do Hoang, Nhu; Ha Thanh, Tuyen; Shretha, Shrijana; Joshi, Suchita; Basnyat, Buddha; Thwaites, Guy; Thomson, Nicholas R; Rabaa, Maia A; Baker, Stephen; (2015) A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae. EMBO molecular medicine, 7 (3). pp. 227-239. ISSN 1757-4676 DOI: https://doi.org/10.15252/emmm.201404767
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Chung The, Hao; Rabaa, Maia A; Thanh, Duy Pham; Ruekit, Sirigade; Wangchuk, Sonam; Dorji, Tshering; Tshering, Kinzang Pem; Nguyen, To Nguyen Thi; Vinh, Phat Voong; Thanh, Tuyen Ha; +9 more... Minh, Chau Nguyen Ngoc; Turner, Paul; Sar, Poda; Thwaites, Guy; Holt, Kathryn E; Thomson, Nicholas R; Bodhidatta, Ladaporn; Jeffries Mason, Carl; Baker, Stephen; (2015) Introduction and establishment of fluoroquinolone-resistant Shigella sonnei into Bhutan. Microbial genomics, 1 (6). e000042-. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000042
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Clark, C; Stensvold, C; (2015) The Continuously Expanding Universe of Entamoeba. In: Nozaki, T; Bhattacharya, A, (eds.) Amebiasis: Biology and Pathogenesis of Entamoeba. Springer, Japan, pp. 9-25. ISBN 978-4-431-55199-7 https://researchonline.lshtm.ac.uk/id/eprint/2131849 Full text not available from this repository.

Coll I Cerezo, F; (2015) Bioinformatic analysis of Mycobacterium tuberculosis whole genome data. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02124343
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Coll, Francesc; McNerney, Ruth; Preston, Mark D; Guerra-Assunção, José Afonso; Warry, Andrew; Hill-Cawthorne, Grant; Mallard, Kim; Nair, Mridul; Miranda, Anabela; Alves, Adriana; +9 more... Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Hasan, Zahra; Hasan, Rumina; Glynn, Judith R; Martin, Nigel; Pain, Arnab; Clark, Taane G; (2015) Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences. Genome medicine, 7 (1). 51-. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-015-0164-0
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Connor, Thomas R; Barker, Clare R; Baker, Kate S; Weill, François-Xavier; Talukder, Kaisar Ali; Smith, Anthony M; Baker, Stephen; Gouali, Malika; Pham Thanh, Duy; Jahan Azmi, Ishrat; +10 more... Dias da Silveira, Wanderley; Semmler, Torsten; Wieler, Lothar H; Jenkins, Claire; Cravioto, Alejandro; Faruque, Shah M; Parkhill, Julian; Wook Kim, Dong; Keddy, Karen H; Thomson, Nicholas R; (2015) Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri. eLife, 4 (AUGUST). e07335-. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.07335
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Corcionivoschi, Nicolae; Gundogdu, Ozan; Moran, Lynn; Kelly, Carmel; Scates, Pam; Stef, Lavinia; Cean, Ada; Wren, Brendan; Dorrell, Nick; Madden, Robert H; (2015) Virulence characteristics of hcp (+) Campylobacter jejuni and Campylobacter coli isolates from retail chicken. Gut pathogens, 7 (1). 20-. ISSN 1757-4749 DOI: https://doi.org/10.1186/s13099-015-0067-z
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Cornick, Jennifer E; Chaguza, Chrispin; Harris, Simon R; Yalcin, Feyruz; Senghore, Madikay; Kiran, Anmol M; Govindpershad, Shanil; Ousmane, Sani; Plessis, Mignon Du; Pluschke, Gerd; +12 more... Ebruke, Chinelo; McGee, Lesley; Sigaùque, Beutel; Collard, Jean-Marc; Antonio, Martin; von Gottberg, Anne; French, Neil; Klugman, Keith P; Heyderman, Robert S; Bentley, Stephen D; Everett, Dean B; For The PAGe Consortium; (2015) Region-specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae. Microbial genomics, 1 (2). e000027-. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000027
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Cortes, Teresa; Cox, Robert Ashley; (2015) Transcription and translation of the rpsJ, rplN and rRNA operons of the tubercle bacillus. Microbiology (Reading, England), 161 (Pt 4). pp. 719-728. ISSN 1350-0872 DOI: https://doi.org/10.1099/mic.0.000037 Full text not available from this repository.

Costales, Jaime A; Jara-Palacios, Miguel A; Llewellyn, Martin S; Messenger, Louisa A; Ocaña-Mayorga, Sofía; Villacís, Anita G; Tibayrenc, Michel; Grijalva, Mario J; (2015) Trypanosoma cruzi population dynamics in the Central Ecuadorian Coast. Acta tropica, 151 (1). pp. 88-93. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2015.07.017 Full text not available from this repository.

Costales, Jaime A; Kotton, Camille N; Zurita-Leal, Andrea C; Garcia-Perez, Josselyn; Llewellyn, Martin S; Messenger, Louisa A; Bhattacharyya, Tapan; Burleigh, Barbara A; (2015) Chagas disease reactivation in a heart transplant patient infected by domestic Trypanosoma cruzi discrete typing unit I (TcIDOM). Parasites & vectors, 8 (1). 435-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-015-1039-3
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Crepin, Valerie F; Habibzay, Maryam; Glegola-Madejska, Izabela; Guenot, Marianne; Collins, James W; Frankel, Gad; (2015) Tir Triggers Expression of CXCL1 in Enterocytes and Neutrophil Recruitment during Citrobacter rodentium Infection. Infection and immunity, 83 (9). pp. 3342-3354. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00291-15 Full text not available from this repository.

D

DEWIN, D; CATUSSE, J; GOMPELS, UA; (2015) Novel Cytokine. US8940686B2. Full text not available from this repository.

Dalla Costa, Elis R; Vasconcelos, Sidra EG; Esteves, Leonardo S; Gomes, Harrison M; Gomes, Lia L; da Silva, Pedro Almeida; Perdigão, João; Portugal, Isabel; Viveiros, Miguel; McNerney, Ruth; +6 more... Pain, Arnab; Clark, Taane G; Rastogi, Nalin; Unis, Gisela; Rossetti, Maria Lucia R; Suffys, Philip Noel; (2015) Multidrug-Resistant Mycobacterium tuberculosis of the Latin American Mediterranean Lineage, Wrongly Identified as Mycobacterium pinnipedii (Spoligotype International Type 863 [SIT863]), Causing Active Tuberculosis in South Brazil. Journal of clinical microbiology, 53 (12). pp. 3805-3811. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02012-15 Full text not available from this repository.

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Das, Sujaan; Hertrich, Nadine; Perrin, Abigail J; Withers-Martinez, Chrislaine; Collins, Christine R; Jones, Matthew L; Watermeyer, Jean M; Fobes, Elmar T; Martin, Stephen R; Saibil, Helen R; +4 more... Wright, Gavin J; Treeck, Moritz; Epp, Christian; Blackman, Michael J; (2015) Processing of Plasmodium falciparum Merozoite Surface Protein MSP1 Activates a Spectrin-Binding Function Enabling Parasite Egress from RBCs. Cell host & microbe, 18 (4). pp. 433-444. ISSN 1931-3128 DOI: https://doi.org/10.1016/j.chom.2015.09.007
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Duffy, Craig W; Assefa, Samuel A; Abugri, James; Amoako, Nicholas; Owusu-Agyei, Seth; Anyorigiya, Thomas; MacInnis, Bronwyn; Kwiatkowski, Dominic P; Conway, David J; Awandare, Gordon A; (2015) Comparison of genomic signatures of selection on Plasmodium falciparum between different regions of a country with high malaria endemicity. BMC genomics, 16 (1). 527-. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-015-1746-3
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del Rosario, Ricardo Cruz-Herrera; Poschmann, Jeremie; Rouam, Sigrid Laure; Png, Eileen; Khor, Chiea Chuen; Hibberd, Martin Lloyd; Prabhakar, Shyam; (2015) Sensitive detection of chromatin-altering polymorphisms reveals autoimmune disease mechanisms. Nature methods, 12 (5). pp. 458-464. ISSN 1548-7091 DOI: https://doi.org/10.1038/nmeth.3326 Full text not available from this repository.

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Farnell, Edward J; Tyagi, Nidhi; Ryan, Stephanie; Chalmers, Iain W; Pinot de Moira, Angela; Jones, Frances M; Wawrzyniak, Jakub; Fitzsimmons, Colin M; Tukahebwa, Edridah M; Furnham, Nicholas; +2 more... Maizels, Rick M; Dunne, David W; (2015) Known Allergen Structures Predict Schistosoma mansoni IgE-Binding Antigens in Human Infection. Frontiers in immunology, 6 (FEB). 26-. ISSN 1664-3224 DOI: https://doi.org/10.3389/fimmu.2015.00026
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Furnham, Nicholas; Dawson, Natalie L; Rahman, Syed A; Thornton, Janet M; Orengo, Christine A; (2015) Large-Scale Analysis Exploring Evolution of Catalytic Machineries and Mechanisms in Enzyme Superfamilies. Journal of molecular biology, 428 (2 Pt A). pp. 253-267. ISSN 0022-2836 DOI: https://doi.org/10.1016/j.jmb.2015.11.010
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Furuya-Kanamori, Luis; Marquess, John; Yakob, Laith; Riley, Thomas V; Paterson, David L; Foster, Niki F; Huber, Charlotte A; Clements, Archie CA; (2015) Asymptomatic Clostridium difficile colonization: epidemiology and clinical implications. BMC infectious diseases, 15 (1). 516-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-015-1258-4
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Furuya-Kanamori, Luis; Wangdi, Kinley; Yakob, Laith; McKenzie, Samantha J; Doi, Suhail AR; Clark, Justin; Paterson, David L; Riley, Thomas V; Clements, Archie CA; (2015) 25-Hydroxyvitamin D Concentrations and Clostridium difficile Infection: A Meta-Analysis. JPEN Journal of parenteral and enteral nutrition, 41 (5). pp. 890-895. ISSN 0148-6071 DOI: https://doi.org/10.1177/0148607115623457 Full text not available from this repository.

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García Bustos, María F; González-Prieto, Gabriela; Ramos, Federico; Mora, María C; Hashiguchi, Yoshihisa; Parodi, Cecilia; Basombrío, Miguel A; Moreno, Sonia; Monroig, Sibila; Beckar, Josefina; +6 more... Jaime, Daniela; Sajama, Jesús; Yeo, Matthew; Marco, Jorge D; Locatelli, Fabricio M; Barrio, Alejandra; (2015) Clinical and epidemiological features of leishmaniasis in northwestern-Argentina through a retrospective analysis of recent cases. Acta tropica, 154. pp. 125-132. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2015.11.008 Full text not available from this repository.

Getachew, Sisay; To, Sheren; Trimarsanto, Hidayat; Thriemer, Kamala; Clark, Taane G; Petros, Beyene; Aseffa, Abraham; Price, Ric N; Auburn, Sarah; (2015) Variation in Complexity of Infection and Transmission Stability between Neighbouring Populations of Plasmodium vivax in Southern Ethiopia. PloS one, 10 (10). e0140780-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0140780
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Hachani, Abderrahman; Wood, Thomas E; Filloux, Alain; (2015) Type VI secretion and anti-host effectors. Current opinion in microbiology, 29. pp. 81-93. ISSN 1369-5274 DOI: https://doi.org/10.1016/j.mib.2015.11.006 Full text not available from this repository.

Hernández, P; Punchak, M; Camacho, M; Hepple, P; McNerney, R; (2015) Investigating the quality of expectorated sputum for tuberculosis diagnosis in Bolivia. The international journal of tuberculosis and lung disease, 19 (9). pp. 1065-1067. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.14.0700 Full text not available from this repository.

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Howell, Kate J; Peters, Sarah E; Wang, Jinhong; Hernandez-Garcia, Juan; Weinert, Lucy A; Luan, Shi-Lu; Chaudhuri, Roy R; Angen, Øystein; Aragon, Virginia; Williamson, Susanna M; +7 more... Parkhill, Julian; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Maskell, Duncan J; Tucker, Alexander W; BRaDP1T Consortium; (2015) Development of a Multiplex PCR Assay for Rapid Molecular Serotyping of Haemophilus parasuis. Journal of clinical microbiology, 53 (12). pp. 3812-3821. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01991-15 Full text not available from this repository.

Hughes, John; Stabler, Richard; Gaunt, Michael; Karadag, Tacim; Desai, Nergish; Betley, Jason; Ioannou, Avgousta; Aryee, Anna; Hearn, Pasco; Marbach, Helene; +4 more... Patel, Amita; Otter, Jonathan A; Edgeworth, Jonathan D; Tosas Auguet, Olga; (2015) Clonal variation in high- and low-level phenotypic and genotypic mupirocin resistance of MRSA isolates in south-east London. The Journal of antimicrobial chemotherapy, 70 (12). pp. 3191-3199. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkv248
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Hungerford, D; Read, JM; Cooke, RP; Vivancos, R; Iturriza-Gómara, M; Allen, DJ; French, N; Cunliffe, N; (2015) Early impact of rotavirus vaccination in a large paediatric hospital in the UK. Technical Report. Elsevier. DOI: https://doi.org/10.1016/j.jhin.2015.12.010
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Jacob, Alison S; Busby, Eloise J; Levy, Abigail D; Komm, Natasha; Clark, C Graham; (2015) Expanding the Entamoeba Universe: New Hosts Yield Novel Ribosomal Lineages. The Journal of eukaryotic microbiology, 63 (1). pp. 69-78. ISSN 1066-5234 DOI: https://doi.org/10.1111/jeu.12249
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Jervis, Adrian J; Butler, Jonathan A; Wren, Brendan W; Linton, Dennis; (2015) Chromosomal integration vectors allowing flexible expression of foreign genes in Campylobacter jejuni. BMC microbiology, 15 (1). 230-. ISSN 1471-2180 DOI: https://doi.org/10.1186/s12866-015-0559-5
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Kanji, Akbar; Hasan, Zahra; Ali, Asho; McNerney, Ruth; Mallard, Kim; Coll, Francesc; Hill-Cawthorne, Grant; Nair, Mridul; Clark, Taane G; Zaver, Ambreen; +2 more... Jafri, Sana; Hasan, Rumina; (2015) Characterization of genomic variations in SNPs of PE_PGRS genes reveals deletions and insertions in extensively drug resistant (XDR) M. tuberculosis strains from Pakistan. International journal of mycobacteriology, 4 (1). pp. 73-79. ISSN 2212-5531 DOI: https://doi.org/10.1016/j.ijmyco.2014.11.049
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Kim, Jeong Joo; Flueck, Christian; Franz, Eugen; Sanabria-Figueroa, Eduardo; Thompson, Eloise; Lorenz, Robin; Bertinetti, Daniela; Baker, David A; Herberg, Friedrich W; Kim, Choel; (2015) Crystal structures of the carboxyl cGMP binding domain of the Plasmodium falciparum cGMP-dependent protein kinase reveal a novel capping triad crucial for merozoite egress. PLoS pathogens, 11 (2). e1004639-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1004639
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Kumar, Nitin; Miyajima, Fabio; He, Miao; Roberts, Paul; Swale, Andrew; Ellison, Louise; Pickard, Derek; Smith, Godfrey; Molyneux, Rebecca; Dougan, Gordon; +5 more... Parkhill, Julian; Wren, Brendan W; Parry, Christopher M; Pirmohamed, Munir; Lawley, Trevor D; (2015) Genome-Based Infection Tracking Reveals Dynamics of Clostridium difficile Transmission and Disease Recurrence. Clinical infectious diseases, 62 (6). pp. 746-752. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ1031
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Le, Vien; Nhu, Nguyen Thi Khanh; Cerdeno-Tarraga, Ana; Campbell, James I; Tuyen, Ha Thanh; Nhu, Tran Do Hoang; Tam, Pham Thi Thanh; Schultsz, Constance; Thwaites, Guy; Thomson, Nicholas R; +1 more... Baker, Stephen; (2015) Genetic characterization of three qnrS1-harbouring multidrug-resistance plasmids and qnrS1-containing transposons circulating in Ho Chi Minh City, Vietnam. Journal of medical microbiology, 64 (8). pp. 869-878. ISSN 0022-2615 DOI: https://doi.org/10.1099/jmm.0.000100
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Lim, C; Peacock, SJ; Limmathurotsakul, D; (2015) Association between activities related to routes of infection and clinical manifestations of melioidosis. Clinical microbiology and infection, 22 (1). 79.e1-79.e3. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2015.09.016
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Messenger, LA; Yeo, M; Lewis, MD; Llewellyn, MS; Miles, MA; (2015) Molecular Genotyping of Trypanosoma cruzi for Lineage Assignment and Population Genetics. Methods in molecular biology (Clifton, NJ), 1201. pp. 297-337. ISSN 1064-3745 DOI: https://doi.org/10.1007/978-1-4939-1438-8_19 Full text not available from this repository.

Messenger, Louisa A; Garcia, Lineth; Vanhove, Mathieu; Huaranca, Carlos; Bustamante, Marinely; Torrico, Marycruz; Torrico, Faustino; Miles, Michael A; Llewellyn, Martin S; (2015) Ecological host fitting of Trypanosoma cruzi TcI in Bolivia: mosaic population structure, hybridization and a role for humans in Andean parasite dispersal. Molecular ecology, 24 (10). pp. 2406-2422. ISSN 0962-1083 DOI: https://doi.org/10.1111/mec.13186
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Mezey, Gillian; Meyer, Deborah; Robinson, Fiona; Bonell, Chris; Campbell, Rona; Gillard, Steve; Jordan, Peter; Mantovani, Nadia; Wellings, Kaye; White, Sarah; (2015) Developing and piloting a peer mentoring intervention to reduce teenage pregnancy in looked-after children and care leavers: an exploratory randomised controlled trial. Health technology assessment (Winchester, England), 19 (85). 1-vi. ISSN 1366-5278 DOI: https://doi.org/10.3310/hta19850
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Nicoara, Simona C; Turner, Nicholas W; Minnikin, David E; Lee, Oona Y-C; O'Sullivan, Denise M; McNerney, Ruth; Mutetwa, Reggie; Corbett, Liz E; Morgan, Geraint H; (2015) Development of sample clean up methods for the analysis of Mycobacterium tuberculosis methyl mycocerosate biomarkers in sputum extracts by gas chromatography-mass spectrometry. Journal of chromatography B, Analytical technologies in the biomedical and life sciences, 986-98. pp. 135-142. ISSN 1570-0232 DOI: https://doi.org/10.1016/j.jchromb.2015.02.010
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Nielsen, Carolyn M; White, Matthew J; Bottomley, Christian; Lusa, Chiara; Rodríguez-Galán, Ana; Turner, Scarlett EG; Goodier, Martin R; Riley, Eleanor M; (2015) Impaired NK Cell Responses to Pertussis and H1N1 Influenza Vaccine Antigens in Human Cytomegalovirus-Infected Individuals. Journal of immunology (Baltimore, Md, 194 (10). pp. 4657-4667. ISSN 0022-1767 DOI: https://doi.org/10.4049/jimmunol.1403080
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Nigro, Steven J; Holt, Kathryn E; Pickard, Derek; Hall, Ruth M; (2015) Carbapenem and amikacin resistance on a large conjugative Acinetobacter baumannii plasmid. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 70 (4). pp. 1259-1261. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dku486
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Noviyanti, Rintis; Coutrier, Farah; Utami, Retno AS; Trimarsanto, Hidayat; Tirta, Yusrifar K; Trianty, Leily; Kusuma, Andreas; Sutanto, Inge; Kosasih, Ayleen; Kusriastuti, Rita; +7 more... Hawley, William A; Laihad, Ferdinand; Lobo, Neil; Marfurt, Jutta; Clark, Taane G; Price, Ric N; Auburn, Sarah; (2015) Contrasting Transmission Dynamics of Co-endemic Plasmodium vivax and P. falciparum: Implications for Malaria Control and Elimination. PLoS neglected tropical diseases, 9 (5). e0003739-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003739
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Olmo, Francisco; Urbanová, Kristína; Rosales, Maria Jose; Martín-Escolano, Ruben; Sánchez-Moreno, Manuel; Marín, Clotilde; (2015) An in vitro iron superoxide dismutase inhibitor decreases the parasitemia levels of Trypanosoma cruzi in BALB/c mouse model during acute phase. International journal for parasitology Drugs and drug resistance, 5 (3). pp. 110-116. ISSN 2211-3207 DOI: https://doi.org/10.1016/j.ijpddr.2015.05.002
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Parry, Christopher M; Thieu, Nga Tran Vu; Dolecek, Christiane; Karkey, Abhilasha; Gupta, Ruchi; Turner, Paul; Dance, David; Maude, Rapeephan R; Ha, Vinh; Tran, Chinh Nguyen; +25 more... Thi, Phuong Le; Be, Bay Pham Van; Phi, La Tran Thi; Ngoc, Rang Nguyen; Ghose, Aniruddha; Dongol, Sabina; Campbell, James I; Thanh, Duy Pham; Thanh, Tuyen Ha; Moore, Catrin E; Sona, Soeng; Gaind, Rajni; Deb, Monorama; Anh, Ho Van; Van, Sach Nguyen; Tinh, Hien Tran; Day, Nicholas PJ; Dondorp, Arjen; Thwaites, Guy; Faiz, Mohamed Abul; Phetsouvanh, Rattanaphone; Newton, Paul; Basnyat, Buddha; Farrar, Jeremy J; Baker, Stephen; (2015) Erratum for Parry et al., Clinically and microbiologically derived azithromycin susceptibility breakpoints for Salmonella enterica serovars Typhi and Paratyphi A. Antimicrobial agents and chemotherapy, 59 (7). 4364-. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.01014-15 Full text not available from this repository.

Peckham, Stephen; Falconer, Jane; Gillam, Steve; Hann, Alison; Kendall, Sally; Nanchahal, Kiran; Ritchie, Benjamin; Rogers, Rebecca; Wallace, Andrew; (2015) The organisation and delivery of health improvement in general practice and primary care: a scoping study. Health Services and Delivery Research, 3 (29). pp. 1-180. DOI: https://doi.org/10.3310/hsdr03290
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Phelan, Jody; Maitra, Arundhati; McNerney, Ruth; Nair, Mridul; Gupta, Antima; Coll, Francesc; Pain, Arnab; Bhakta, Sanjib; Clark, Taane G; (2015) The draft genome of Mycobacterium aurum, a potential model organism for investigating drugs against Mycobacterium tuberculosis and Mycobacterium leprae. International journal of mycobacteriology, 4 (3). pp. 207-216. ISSN 2212-5531 DOI: https://doi.org/10.1016/j.ijmyco.2015.05.001
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Polley, Spencer D; Bell, David; Oliver, James; Tully, Frank; Perkins, Mark D; Chiodini, Peter L; González, Iveth J; (2015) The design and evaluation of a shaped filter collection device to sample and store defined volume dried blood spots from finger pricks. Malaria journal, 14 (1). 45-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-015-0558-x
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Rabaa, Maia A; Tue, Ngo Tri; Phuc, Tran My; Carrique-Mas, Juan; Saylors, Karen; Cotten, Matthew; Bryant, Juliet E; Nghia, Ho Dang Trung; Cuong, Nguyen Van; Pham, Hong Anh; +26 more... Berto, Alessandra; Phat, Voong Vinh; Dung, Tran Thi Ngoc; Bao, Long Hoang; Hoa, Ngo Thi; Wertheim, Heiman; Nadjm, Behzad; Monagin, Corina; van Doorn, H Rogier; Rahman, Motiur; Tra, My Phan Vu; Campbell, James I; Boni, Maciej F; Tam, Pham Thi Thanh; van der Hoek, Lia; Simmonds, Peter; Rambaut, Andrew; Toan, Tran Khanh; Van Vinh Chau, Nguyen; Hien, Tran Tinh; Wolfe, Nathan; Farrar, Jeremy J; Thwaites, Guy; Kellam, Paul; Woolhouse, Mark EJ; Baker, Stephen; (2015) The Vietnam Initiative on Zoonotic Infections (VIZIONS): A Strategic Approach to Studying Emerging Zoonotic Infectious Diseases. EcoHealth, 12 (4). pp. 726-735. ISSN 1612-9202 DOI: https://doi.org/10.1007/s10393-015-1061-0
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Reynaud, Josephine M; Lulla, Valeria; Kim, Dal Young; Frolova, Elena I; Frolov, Ilya; (2015) The SD1 Subdomain of Venezuelan Equine Encephalitis Virus Capsid Protein Plays a Critical Role in Nucleocapsid and Particle Assembly. Journal of virology, 90 (4). pp. 2008-2020. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.02680-15 Full text not available from this repository.

Richards, Toby; Clevenger, Ben; Keidan, Jane; Collier, Tim; Klein, Andrew A; Anker, Stefan D; Kelly, John D; (2015) PREVENTT: preoperative intravenous iron to treat anaemia in major surgery: study protocol for a randomised controlled trial. Trials, 16 (1). 254-. ISSN 1745-6215 DOI: https://doi.org/10.1186/s13063-015-0774-2
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Samad, Hanif; Coll, Francesc; Preston, Mark D; Ocholla, Harold; Fairhurst, Rick M; Clark, Taane G; (2015) Imputation-based population genetics analysis of Plasmodium falciparum malaria parasites. PLoS genetics, 11 (4). e1005131-. ISSN 1553-7390 DOI: https://doi.org/10.1371/journal.pgen.1005131
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Sander, Peter; Clark, Simon; Petrera, Agnese; Vilaplana, Cristina; Meuli, Michael; Selchow, Petra; Zelmer, Andrea; Mohanan, Deepa; Andreu, Nuria; Rayner, Emma; +6 more... Dal Molin, Michael; Bancroft, Gregory J; Johansen, Pål; Cardona, Pere-Joan; Williams, Ann; Böttger, Erik C; (2015) Deletion of zmp1 improves Mycobacterium bovis BCG-mediated protection in a guinea pig model of tuberculosis. Vaccine, 33 (11). pp. 1353-1359. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2015.01.058 Full text not available from this repository.

Santolamazza, Federica; Caputo, Beniamino; Nwakanma, Davis C; Fanello, Caterina; Petrarca, Vincenzo; Conway, David J; Weetman, David; Pinto, Joao; Mancini, Emiliano; della Torre, Alessandra; (2015) Remarkable diversity of intron-1 of the para voltage-gated sodium channel gene in an Anopheles gambiae/Anopheles coluzzii hybrid zone. Malaria journal, 14 (1). 9-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-014-0522-1
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Siddiqui, Fariha Masood; Ibrahim, Muhammad; Noureen, Nighat; Noreen, Zobia; Titball, Richard W; Champion, Olivia L; Wren, Brendan W; Studholme, David; Bokhari, Habib; (2015) Draft Genome Sequence of the Enteropathogenic Bacterium Campylobacter jejuni Strain cj255. Genome announcements, 3 (5). ISSN 2169-8287 DOI: https://doi.org/10.1128/genomeA.01223-15
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Silva, Daiani Teixeira da; Tejada, Talita Schneid; Blum-Menezes, Dulcinea; Dias, Priscila Alves; Timm, Cláudio Dias; (2015) Campylobacter species isolated from poultry and humans, and their analysis using PFGE in southern Brazil. International journal of food microbiology, 217. pp. 189-194. ISSN 0168-1605 DOI: https://doi.org/10.1016/j.ijfoodmicro.2015.10.025 Full text not available from this repository.

Sim, Shuzhen; Aw, Pauline PK; Wilm, Andreas; Teoh, Garrett; Hue, Kien Duong Thi; Nguyen, Nguyet Minh; Nagarajan, Niranjan; Simmons, Cameron P; Hibberd, Martin L; (2015) Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission. PLoS neglected tropical diseases, 9 (9). e0004052-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004052
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Sola, Irene; Castellà, Sílvia; Viayna, Elisabet; Galdeano, Carles; Taylor, Martin C; Gbedema, Stephen Y; Pérez, Belén; Clos, M Victòria; Jones, Deuan C; Fairlamb, Alan H; +3 more... Wright, Colin W; Kelly, John M; Muñoz-Torrero, Diego; (2015) Synthesis, biological profiling and mechanistic studies of 4-aminoquinoline-based heterodimeric compounds with dual trypanocidal-antiplasmodial activity. Bioorganic & medicinal chemistry, 23 (16). pp. 5156-5167. ISSN 0968-0896 DOI: https://doi.org/10.1016/j.bmc.2015.01.031 Full text not available from this repository.

Stallmach, Robert; Kavishwar, Manoli; Withers-Martinez, Chrislaine; Hackett, Fiona; Collins, Christine R; Howell, Steven A; Yeoh, Sharon; Knuepfer, Ellen; Atid, Avshalom J; Holder, Anthony A; +1 more... Blackman, Michael J; (2015) Plasmodium falciparum SERA5 plays a non-enzymatic role in the malarial asexual blood-stage lifecycle. Molecular microbiology, 96 (2). pp. 368-387. ISSN 0950-382X DOI: https://doi.org/10.1111/mmi.12941
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Terra, Vanessa Sofia; Zhi, Xiangyun; Kahya, Hasan F; Andrew, Peter W; Yesilkaya, Hasan; (2015) Pneumococcal 6-Phospho-β-Glucosidase (BglA3) Is Involved in Virulence and Nutrient Metabolism. Infection and immunity, 84 (1). pp. 286-292. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.01108-15 Full text not available from this repository.

Thompson, Corinne N; Blacksell, Stuart D; Paris, Daniel H; Arjyal, Amit; Karkey, Abhilasha; Dongol, Sabina; Giri, Abhishek; Dolecek, Christiane; Day, Nick; Baker, Stephen; +3 more... Thwaites, Guy; Farrar, Jeremy; Basnyat, Buddha; (2015) Undifferentiated febrile illness in Kathmandu, Nepal. The American journal of tropical medicine and hygiene, 92 (4). pp. 875-878. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.14-0709
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Thompson, Corinne N; Le, Thi Phuong Tu; Anders, Katherine L; Nguyen, Trong Hieu; Lu, Lan Vi; Nguyen, Van Vinh Chau; Vu, Thuy Duong; Nguyen, Ngoc Minh Chau; Tran, Thi Hong Chau; Ha, Thanh Tuyen; +11 more... Tran, Vu Thieu Nga; Pham, Van Minh; Tran, Do Hoang Nhu; Le, Thi Quynh Nhi; Saul, Allan; Martin, Laura B; Podda, Audino; Gerke, Christiane; Thwaites, Guy; Simmons, Cameron P; Baker, Stephen; (2015) The transfer and decay of maternal antibody against Shigella sonnei in a longitudinal cohort of Vietnamese infants. Vaccine, 34 (6). pp. 783-790. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2015.12.047
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Thompson, Corinne N; Phan, My VT; Hoang, Nguyen Van Minh; Minh, Pham Van; Vinh, Nguyen Thanh; Thuy, Cao Thu; Nga, Tran Thi Thu; Rabaa, Maia A; Duy, Pham Thanh; Dung, Tran Thi Ngoc; +19 more... Phat, Voong Vinh; Nga, Tran Vu Thieu; Tu, Le Thi Phuong; Tuyen, Ha Thanh; Yoshihara, Keisuke; Jenkins, Claire; Duong, Vu Thuy; Phuc, Hoang Le; Tuyet, Pham Thi Ngoc; Ngoc, Nguyen Minh; Vinh, Ha; Chinh, Nguyen Tran; Thuong, Tang Chi; Tuan, Ha Manh; Hien, Tran Tinh; Campbell, James I; Chau, Nguyen Van Vinh; Thwaites, Guy; Baker, Stephen; (2015) A prospective multi-center observational study of children hospitalized with diarrhea in Ho Chi Minh City, Vietnam. The American journal of tropical medicine and hygiene, 92 (5). pp. 1045-1052. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.14-0655
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Thompson, Corinne N; Thieu, Nga Tran Vu; Vinh, Phat Voong; Duc, Anh Nguyen; Wolbers, Marcel; Vinh, Ha; Campbell, James I; Ngoc, Dung Tran Thi; Hoang, Nguyen Van Minh; Thanh, Tuyen Ha; +8 more... The, Hao Chung; Nguyen, To Nguyen Thi; Lan, Nguyen Phu Huong; Parry, Christopher M; Chau, Nguyen Van Vinh; Thwaites, Guy; Thanh, Duy Pham; Baker, Stephen; (2015) Clinical implications of reduced susceptibility to fluoroquinolones in paediatric Shigella sonnei and Shigella flexneri infections. The Journal of antimicrobial chemotherapy, 71 (3). pp. 807-815. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkv400
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Thompson, Corinne N; Zelner, Jonathan L; Nhu, Tran Do Hoang; Phan, My Vt; Hoang Le, Phuc; Nguyen Thanh, Hung; Vu Thuy, Duong; Minh Nguyen, Ngoc; Ha Manh, Tuan; Van Hoang Minh, Tu; +8 more... Lu Lan, Vi; Nguyen Van Vinh, Chau; Tran Tinh, Hien; von Clemm, Emmiliese; Storch, Harry; Thwaites, Guy; Grenfell, Bryan T; Baker, Stephen; (2015) The impact of environmental and climatic variation on the spatiotemporal trends of hospitalized pediatric diarrhea in Ho Chi Minh City, Vietnam. Health & place, 35. pp. 147-154. ISSN 1353-8292 DOI: https://doi.org/10.1016/j.healthplace.2015.08.001
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Tu, LTP; Hoang, NVM; Cuong, NV; Campbell, J; Bryant, JE; Hoa, NT; Kiet, BT; Thompson, C; Duy, DT; Phat, VV; +4 more... Hien, VB; Thwaites, G; Baker, S; Carrique-Mas, JJ; (2015) High levels of contamination and antimicrobial-resistant non-typhoidal Salmonella serovars on pig and poultry farms in the Mekong Delta of Vietnam. Epidemiology and infection, 143 (14). pp. 3074-3086. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268815000102
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Tyagi, Nidhi; Farnell, Edward J; Fitzsimmons, Colin M; Ryan, Stephanie; Tukahebwa, Edridah; Maizels, Rick M; Dunne, David W; Thornton, Janet M; Furnham, Nicholas; (2015) Comparisons of Allergenic and Metazoan Parasite Proteins: Allergy the Price of Immunity. PLoS computational biology, 11 (10). e1004546-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1004546
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Van Dung, Nguyen; Anh, Pham Hong; Van Cuong, Nguyen; Hoa, Ngo Thi; Carrique-Mas, Juan; Hien, Vo Be; Sharp, C; Rabaa, M; Berto, A; Campbell, James; +5 more... Baker, Stephen; Farrar, Jeremy; Woolhouse, Mark E; Bryant, Juliet E; Simmonds, Peter; (2015) Large-scale screening and characterization of enteroviruses and kobuviruses infecting pigs in Vietnam. The Journal of general virology, 97 (2). pp. 378-388. ISSN 0022-1317 DOI: https://doi.org/10.1099/jgv.0.000366 Full text not available from this repository.

Vehkala, Minna; Shubin, Mikhail; Connor, Thomas R; Thomson, Nicholas R; Corander, Jukka; (2015) Novel R pipeline for analyzing Biolog Phenotypic MicroArray data. PloS one, 10 (3). e0118392-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0118392
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WAMIN consortium authors include (in alphabetical order):; Ahouidi, Ambroise D; Amambua-Ngwa, Alfred; Awandare, Gordon A; Bei, Amy K; Conway, David J; Diakite, Mahamadou; Duraisingh, Manoj T; Rayner, Julian C; Zenonos, Zenon A; (2015) Malaria Vaccine Development: Focusing Field Erythrocyte Invasion Studies on Phenotypic Diversity: The West African Merozoite Invasion Network (WAMIN). Trends in parasitology, 32 (4). pp. 274-283. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2015.11.009 Full text not available from this repository.

WWARN Artemisinin based Combination Therapy (ACT) Africa Baselin; Dahal, Prabin; d'Alessandro, Umberto; Dorsey, Grant; Guerin, Philippe J; Nsanzabana, Christian; Price, Ric N; Sibley, Carol H; Stepniewska, Kasia; Talisuna, Ambrose O; (2015) Clinical determinants of early parasitological response to ACTs in African patients with uncomplicated falciparum malaria: a literature review and meta-analysis of individual patient data. BMC medicine, 13 (1). 212-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-015-0445-x
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Watermeyer, Jean M; Hale, Victoria L; Hackett, Fiona; Clare, Daniel K; Cutts, Erin E; Vakonakis, Ioannis; Fleck, Roland A; Blackman, Michael J; Saibil, Helen R; (2015) A spiral scaffold underlies cytoadherent knobs in Plasmodium falciparum-infected erythrocytes. Blood, 127 (3). pp. 343-351. ISSN 0006-4971 DOI: https://doi.org/10.1182/blood-2015-10-674002
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Weinert, Lucy A; Chaudhuri, Roy R; Wang, Jinhong; Peters, Sarah E; Corander, Jukka; Jombart, Thibaut; Baig, Abiyad; Howell, Kate J; Vehkala, Minna; Välimäki, Niko; +17 more... Harris, David; Chieu, Tran Thi Bich; Chau, Nguyen Van Vinh; Campbell, James; Schultsz, Constance; Parkhill, Julian; Bentley, Stephen D; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Farrar, Jeremy; Baker, Stephen; Hoa, Ngo Thi; Holden, Matthew TG; Tucker, Alexander W; Maskell, Duncan J; BRaDP1T Consortium; (2015) Erratum: Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis. Nature communications, 6 (1). 7272-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms8272
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Weinert, Lucy A; Chaudhuri, Roy R; Wang, Jinhong; Peters, Sarah E; Corander, Jukka; Jombart, Thibaut; Baig, Abiyad; Howell, Kate J; Vehkala, Minna; Välimäki, Niko; +17 more... Harris, David; Chieu, Tran Thi Bich; Van Vinh Chau, Nguyen; Campbell, James; Schultsz, Constance; Parkhill, Julian; Bentley, Stephen D; Langford, Paul R; Rycroft, Andrew N; Wren, Brendan W; Farrar, Jeremy; Baker, Stephen; Hoa, Ngo Thi; Holden, Matthew TG; Tucker, Alexander W; Maskell, Duncan J; BRaDP1T Consortium; (2015) Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis. Nature communications, 6 (1). 6740-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms7740
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Wick, Ryan R; Schultz, Mark B; Zobel, Justin; Holt, Kathryn E; (2015) Bandage: interactive visualization of de novo genome assemblies. Bioinformatics, 31 (20). pp. 3350-3352. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/btv383
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Willing, Stephanie E; Candela, Thomas; Shaw, Helen Alexandra; Seager, Zoe; Mesnage, Stéphane; Fagan, Robert P; Fairweather, Neil F; (2015) Clostridium difficile surface proteins are anchored to the cell wall using CWB2 motifs that recognise the anionic polymer PSII. Molecular microbiology, 96 (3). pp. 596-608. ISSN 0950-382X DOI: https://doi.org/10.1111/mmi.12958
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Wong, Vanessa K; Baker, Stephen; Pickard, Derek J; Parkhill, Julian; Page, Andrew J; Feasey, Nicholas A; Kingsley, Robert A; Thomson, Nicholas R; Keane, Jacqueline A; Weill, François-Xavier; +64 more... Edwards, David J; Hawkey, Jane; Harris, Simon R; Mather, Alison E; Cain, Amy K; Hadfield, James; Hart, Peter J; Thieu, Nga Tran Vu; Klemm, Elizabeth J; Glinos, Dafni A; Breiman, Robert F; Watson, Conall H; Kariuki, Samuel; Gordon, Melita A; Heyderman, Robert S; Okoro, Chinyere; Jacobs, Jan; Lunguya, Octavie; Edmunds, W John; Msefula, Chisomo; Chabalgoity, Jose A; Kama, Mike; Jenkins, Kylie; Dutta, Shanta; Marks, Florian; Campos, Josefina; Thompson, Corinne; Obaro, Stephen; MacLennan, Calman A; Dolecek, Christiane; Keddy, Karen H; Smith, Anthony M; Parry, Christopher M; Karkey, Abhilasha; Mulholland, E Kim; Campbell, James I; Dongol, Sabina; Basnyat, Buddha; Dufour, Muriel; Bandaranayake, Don; Naseri, Take Toleafoa; Singh, Shalini Pravin; Hatta, Mochammad; Newton, Paul; Onsare, Robert S; Isaia, Lupeoletalalei; Dance, David; Davong, Viengmon; Thwaites, Guy; Wijedoru, Lalith; Crump, John A; De Pinna, Elizabeth; Nair, Satheesh; Nilles, Eric J; Thanh, Duy Pham; Turner, Paul; Soeng, Sona; Valcanis, Mary; Powling, Joan; Dimovski, Karolina; Hogg, Geoff; Farrar, Jeremy; Holt, Kathryn E; Dougan, Gordon; (2015) Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events. Nature genetics, 47 (6). pp. 632-639. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.3281 Full text not available from this repository.

Wyres, Kelly L; Gorrie, Claire; Edwards, David J; Wertheim, Heiman FL; Hsu, Li Yang; Van Kinh, Nguyen; Zadoks, Ruth; Baker, Stephen; Holt, Kathryn E; (2015) Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258. Genome biology and evolution, 7 (5). pp. 1267-1279. ISSN 1759-6653 DOI: https://doi.org/10.1093/gbe/evv062
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Zhang, Xing; Patel, Avnish; Celma, Cristina C; Yu, Xuekui; Roy, Polly; Zhou, Z Hong; (2015) Atomic model of a nonenveloped virus reveals pH sensors for a coordinated process of cell entry. Nature structural & molecular biology, 23 (1). pp. 74-80. ISSN 1545-9993 DOI: https://doi.org/10.1038/nsmb.3134
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Zoltner, Martin; Leung, Ka Fai; Alsford, Sam; Horn, David; Field, Mark C; (2015) Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes. PLoS pathogens, 11 (10). e1005236-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1005236
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This list was generated on Fri Aug 7 05:38:36 2020 BST.