Items where Author or Contributor is "Phan, My VT"

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Number of items: 23.

2021

Allesøe, Rosa L; Lemvigh, Camilla K; Phan, My VT; Clausen, Philip TLC; Florensa, Alfred F; Koopmans, Marion PG; Lund, Ole; Cotten, Matthew; (2021) Automated download and clean-up of family-specific databases for kmer-based virus identification. Bioinformatics (Oxford, England), 37 (5). pp. 705-710. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/btaa857
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Bugembe, Daniel Lule; Phan, My VT; Ssewanyana, Isaac; Semanda, Patrick; Nansumba, Hellen; Dhaala, Beatrice; Nabadda, Susan; O'Toole, Áine Niamh; Rambaut, Andrew; Kaleebu, Pontiano; +1 more... Cotten, Matthew; (2021) Emergence and spread of a SARS-CoV-2 lineage A variant (A.23.1) with altered spike protein in Uganda. Nature microbiology, 6 (8). pp. 1094-1101. ISSN 2058-5276 DOI: https://doi.org/10.1038/s41564-021-00933-9
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Kwok, Kirsty TT; de Rooij, Myrna MT; Sinartio, Felisita F; Smit, Lidwien AM; Koopmans, Marion PG; Phan, My VT; (2021) Genome Sequence of a Minacovirus Strain from a Farmed Mink in The Netherlands. Microbiology resource announcements, 10 (8). ISSN 2576-098X DOI: https://doi.org/10.1128/MRA.01451-20
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Lambisia, Arnold W; Phan, My VT; de Laurent, Zaydah R; Cotten, Matthew; Nokes, D James; Agoti, Charles N; (2021) Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019. Microbiology resource announcements, 10 (15). ISSN 2576-098X DOI: https://doi.org/10.1128/MRA.00162-21
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Roach, Michael; Cantu, Adrian; Vieri, Melissa Krizia; Cotten, Matthew; Kellam, Paul; Phan, My; Hoek, Lia van der; Mandro, Michel; Tepage, Floribert; Mambandu, Germain; +5 more... Musinya, Gisele; Laudisoit, Anne; Colebunders, Robert; Edwards, Robert; Mokili, John L; (2021) No Evidence Known Viruses Play a Role in the Pathogenesis of Onchocerciasis-Associated Epilepsy. An Explorative Metagenomic Case-Control Study. Pathogens (Basel, Switzerland), 10 (7). p. 787. ISSN 2076-0817 DOI: https://doi.org/10.3390/pathogens10070787
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2020

Bugembe, Daniel Lule; Kayiwa, John; Phan, My VT; Tushabe, Phiona; Balinandi, Stephen; Dhaala, Beatrice; Lexow, Jonas; Mwebesa, Henry; Aceng, Jane; Kyobe, Henry; +4 more... Ssemwanga, Deogratius; Lutwama, Julius; Kaleebu, Pontiano; Cotten, Matthew; (2020) Main Routes of Entry and Genomic Diversity of SARS-CoV-2, Uganda. EMERGING INFECTIOUS DISEASES, 26 (10). pp. 2411-2415. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2610.202575
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Kamau, Everlyn; Oketch, John W; de Laurent, Zaydah R; Phan, My VT; Agoti, Charles N; Nokes, D James; Cotten, Matthew; (2020) Correction to: Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. BMC genomics, 21 (1). p. 83. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-020-6498-z
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Kamau, Everlyn; Oketch, John W; de Laurent, Zaydah R; Phan, My VT; Agoti, Charles N; Nokes, D James; Cotten, Matthew; (2020) Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. BMC GENOMICS, 21 (1). 5-. ISSN 1471-2164 DOI: https://doi.org/10.1186/s12864-019-6400-z
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Nieuwenhuijse, David F; Oude Munnink, Bas B; Phan, My VT; Global Sewage Surveillance project consortium; Munk, Patrick; Venkatakrishnan, Shweta; Aarestrup, Frank M; Cotten, Matthew; Koopmans, Marion PG; (2020) Setting a baseline for global urban virome surveillance in sewage. Scientific reports, 10 (1). p. 13748. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-020-69869-0
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Phan, My VT; Mendonca Melo, Mariana; van Nood, Els; Aron, Georgina; Kreeft-Voermans, Jolanda JC; Koopmans, Marion PG; Reusken, Chantal; GeurtsvanKessel, Corine H; Cotten, Matthew; (2020) Shedding of Yellow Fever Virus From an Imported Case in the Netherlands After Travel to Brazil. OPEN FORUM INFECTIOUS DISEASES, 7 (2). ofaa020-. ISSN 2328-8957 DOI: https://doi.org/10.1093/ofid/ofaa020
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2019

Agoti, Charles N; Phan, My VT; Munywoki, Patrick K; Githinji, George; Medley, Graham F; Cane, Patricia A; Kellam, Paul; Cotten, Matthew; Nokes, D James; (2019) Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant. Scientific reports, 9 (1). 10076-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-019-46509-w
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Phan, My VT; Arron, Georgina; GeurtsvanKessel, Corine H; Huisman, Robin C; Molenkamp, Richard; Koopmans, Marion PG; Cotten, Matthew; (2019) Complete Genome Characterization of Eight Human Parainfluenza Viruses from the Netherlands. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 8 (15). ISSN 2576-098X DOI: https://doi.org/10.1128/MRA.00125-19
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Strubbia, Sofia; Phan, My VT; Schaeffer, Julien; Koopmans, Marion; Cotten, Matthew; Le Guyader, Françoise S; (2019) Characterization of Norovirus and Other Human Enteric Viruses in Sewage and Stool Samples Through Next-Generation Sequencing. FOOD AND ENVIRONMENTAL VIROLOGY, 11 (4). pp. 400-409. ISSN 1867-0334 DOI: https://doi.org/10.1007/s12560-019-09402-3
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Tapinos, Avraam; Constantinides, Bede; Phan, My VT; Kouchaki, Samaneh; Cotten, Matthew; Robertson, David L; (2019) The Utility of Data Transformation for Alignment, De Novo Assembly and Classification of Short Read Virus Sequences. VIRUSES-BASEL, 11 (5). p. 394. ISSN 1999-4915 DOI: https://doi.org/10.3390/v11050394
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2018

Phan, My VT; Ngo Tri, Tue; Hong Anh, Pham; Baker, Stephen; Kellam, Paul; Cotten, Matthew; (2018) Identification and characterization of Coronaviridae genomes from Vietnamese bats and rats based on conserved protein domains. VIRUS EVOLUTION, 4 (2). vey035-. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vey035
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2017

Agoti, Charles N; Munywoki, Patrick K; Phan, My VT; Otieno, James R; Kamau, Everlyn; Bett, Anne; Kombe, Ivy; Githinji, George; Medley, Graham F; Cane, Patricia A; +3 more... Kellam, Paul; Cotten, Matthew; Nokes, D James; (2017) Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis. Virus evolution, 3 (1). vex006-. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vex006
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2016

Fraaij, Pieter LA; Wildschut, Enno D; Houmes, Robert J; Swaan, Corien M; Hoebe, Christian J; de Jonge, HCC; Tolsma, Paulien; de Kleer, Isme; Pas, Suzan D; Oude Munnink, Bas B; +10 more... Phan, My VT; Bestebroer, Theo M; Roosenhoff, R Shanty; van Kampen, Jeroen JA; Cotten, Matthew; Beerens, Nancy; Fouchier, Ron AM; van den Kerkhof, Johannes H; Timen, Aura; Koopmans, Marion P; (2016) Severe acute respiratory infection caused by swine influenza virus in a child necessitating extracorporeal membrane oxygenation (ECMO), the Netherlands, October 2016. EUROSURVEILLANCE, 21 (48). pp. 8-10. ISSN 1560-7917 DOI: https://doi.org/10.2807/1560-7917.ES.2016.21.48.30416
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Phan, My VT; Anh, Pham Hong; Cuong, Nguyen Van; Munnink, Bas B Oude; van der Hoek, Lia; My, Phuc Tran; Tri, Tue Ngo; Bryant, Juliet E; Baker, Stephen; Thwaites, Guy; +5 more... Woolhouse, Mark; Kellam, Paul; Rabaa, Maia A; Cotten, Matthew; VIZIONS Consortium; (2016) Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection. Virus evolution, 2 (2). vew027-. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vew027
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2015

Thompson, Corinne N; Phan, My VT; Hoang, Nguyen Van Minh; Minh, Pham Van; Vinh, Nguyen Thanh; Thuy, Cao Thu; Nga, Tran Thi Thu; Rabaa, Maia A; Duy, Pham Thanh; Dung, Tran Thi Ngoc; +19 more... Phat, Voong Vinh; Nga, Tran Vu Thieu; Tu, Le Thi Phuong; Tuyen, Ha Thanh; Yoshihara, Keisuke; Jenkins, Claire; Duong, Vu Thuy; Phuc, Hoang Le; Tuyet, Pham Thi Ngoc; Ngoc, Nguyen Minh; Vinh, Ha; Chinh, Nguyen Tran; Thuong, Tang Chi; Tuan, Ha Manh; Hien, Tran Tinh; Campbell, James I; Chau, Nguyen Van Vinh; Thwaites, Guy; Baker, Stephen; (2015) A prospective multi-center observational study of children hospitalized with diarrhea in Ho Chi Minh City, Vietnam. The American journal of tropical medicine and hygiene, 92 (5). pp. 1045-1052. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.14-0655
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Thompson, Corinne N; Zelner, Jonathan L; Nhu, Tran Do Hoang; Phan, My Vt; Hoang Le, Phuc; Nguyen Thanh, Hung; Vu Thuy, Duong; Minh Nguyen, Ngoc; Ha Manh, Tuan; Van Hoang Minh, Tu; +8 more... Lu Lan, Vi; Nguyen Van Vinh, Chau; Tran Tinh, Hien; von Clemm, Emmiliese; Storch, Harry; Thwaites, Guy; Grenfell, Bryan T; Baker, Stephen; (2015) The impact of environmental and climatic variation on the spatiotemporal trends of hospitalized pediatric diarrhea in Ho Chi Minh City, Vietnam. Health & place, 35. pp. 147-154. ISSN 1353-8292 DOI: https://doi.org/10.1016/j.healthplace.2015.08.001
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2014

Cotten, Matthew; Petrova, Velislava; Phan, My VT; Rabaa, Maia A; Watson, Simon J; Ong, Swee Hoe; Kellam, Paul; Baker, Stephen; (2014) Deep sequencing of norovirus genomes defines evolutionary patterns in an urban tropical setting. Journal of virology, 88 (19). pp. 11056-11069. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.01333-14
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This list was generated on Wed Oct 20 07:12:54 2021 BST.