Endo, Akira; Centre for the Mathematical Modelling of Infectious Diseases COV; Leclerc, Quentin J; Knight, Gwenan M; Medley, Graham F; Atkins, Katherine E; Funk, Sebastian; Kucharski, Adam J; (2021) Implication of backward contact tracing in the presence of overdispersed transmission in COVID-19 outbreaks. Wellcome Open Research, 5. 239-. DOI: https://doi.org/10.12688/wellcomeopenres.16344.3

Jung, Sung-Mok; Endo, Akira; Kinoshita, Ryo; Nishiura, Hiroshi; (2021) Projecting a second wave of COVID-19 in Japan with variable interventions in high-risk settings. Royal Society open science, 8 (3). 202169-. ISSN 2054-5703 DOI: https://doi.org/10.1098/rsos.202169

Munday, James D; Sherratt, Katharine; Meakin, Sophie; Endo, Akira; Pearson, Carl AB; Hellewell, Joel; Abbott, Sam; Bosse, Nikos I; CMMID COVID-19 Working Group; Atkins, Katherine E; +4 more... Wallinga, Jacco; Edmunds, W John; van Hoek, Albert Jan; Funk, Sebastian; (2021) Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England. Nature communications, 12 (1). 1942-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-021-22213-0

Abbott, Sam; Hellewell, Joel; Thompson, Robin N; Sherratt, Katharine; Gibbs, Hamish P; Bosse, Nikos I; Munday, James D; Meakin, Sophie; Doughty, Emma L; Chun, June Young; +11 more... Chan, Yung-Wai Desmond; Finger, Flavio; Campbell, Paul; Endo, Akira; Pearson, Carl AB; Gimma, Amy; Russell, Tim; Flasche, Stefan; Kucharski, Adam J; Eggo, Rosalind M; Funk, Sebastian; (2020) Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts. Wellcome Open Research, 5. p. 112. DOI: https://doi.org/10.12688/wellcomeopenres.16006.1

Abbott, Sam; Hellewell, Joel; Thompson, Robin N; Sherratt, Katharine; Gibbs, Hamish P; Bosse, Nikos I; Munday, James D; Meakin, Sophie; Doughty, Emma L; Chun, June Young; +11 more... Chan, Yung-Wai Desmond; Finger, Flavio; Campbell, Paul; Endo, Akira; Pearson, Carl AB; Gimma, Amy; Russell, Tim; Flasche, Stefan; Kucharski, Adam J; Eggo, Rosalind M; Funk, Sebastian; (2020) Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts. Wellcome Open Research, 5. p. 112. DOI: https://doi.org/10.12688/wellcomeopenres.16006.2

Endo, A; Funk, S; Kucharski, AJ; (2020) Bias correction methods for test-negative designs in the presence of misclassification. EPIDEMIOLOGY AND INFECTION, 148. e216-. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268820002058

Endo, A; Nishiura, H; (2020) Age and geographic dependence of Zika virus infection during the outbreak on Yap island, 2007. Mathematical Biosciences and Engineering, 17 (4). pp. 4115-4126. ISSN 1551-0018 DOI: https://doi.org/10.3934/mbe.2020228

Endo, Akira; (2020) Letter to the Editor: correspondence to Yokota et al. (2020) "Mass screening of asymptomatic persons for SARS-CoV-2 using saliva". Clinical infectious diseases. ciaa1656-. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciaa1656

Endo, Akira; Centre for the Mathematical Modelling of Infectious Diseases COV; Abbott, Sam; Kucharski, Adam J; Funk, Sebastian; (2020) Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China. Wellcome Open Research, 5. 67-. DOI: https://doi.org/10.12688/wellcomeopenres.15842.3

Endo, Akira; Centre for the Mathematical Modelling of Infectious Diseases COV; Leclerc, Quentin J; Knight, Gwenan M; Medley, Graham F; Atkins, Katherine E; Funk, Sebastian; Kucharski, Adam J; (2020) Implication of backward contact tracing in the presence of overdispersed transmission in COVID-19 outbreaks. Wellcome open research, 5. 239-. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.16344.1

Endo, Akira; Centre for the Mathematical Modelling of Infectious Diseases COV; Leclerc, Quentin J; Knight, Gwenan M; Medley, Graham F; Atkins, Katherine E; Funk, Sebastian; Kucharski, Adam J; (2020) Implication of backward contact tracing in the presence of overdispersed transmission in COVID-19 outbreaks. Wellcome Open Res, 5. 239-. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.16344.2

Jit, Mark; Jombart, Thibaut; Nightingale, Emily S; Endo, Akira; Abbott, Sam; LSHTM Centre for Mathematical Modelling of Infectious Diseases C; Edmunds, W John; (2020) Estimating number of cases and spread of coronavirus disease (COVID-19) using critical care admissions, United Kingdom, February to March 2020. EUROSURVEILLANCE, 25 (18). pp. 6-10. ISSN 1560-7917 DOI: https://doi.org/10.2807/1560-7917.ES.2020.25.18.2000632

Nishi, Akihiro; Dewey, George; Endo, Akira; Neman, Sophia; Iwamoto, Sage K; Ni, Michael Y; Tsugawa, Yusuke; Iosifidis, Georgios; Smith, Justin D; Young, Sean D; (2020) Network interventions for managing the COVID-19 pandemic and sustaining economy. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 117 (48). pp. 30285-30294. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.2014297117

Endo, Akira; Uchida, Mitsuo; Kucharski, Adam J; Funk, Sebastian; (2019) Fine-scale family structure shapes influenza transmission risk in households: Insights from primary schools in Matsumoto city, 2014/15. PLoS computational biology, 15 (12). e1007589-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1007589

Endo, Akira; van Leeuwen, Edwin; Baguelin, Marc; (2019) Introduction to particle Markov-chain Monte Carlo for disease dynamics modellers. Epidemics, 29. 100363-. ISSN 1755-4365 DOI: https://doi.org/10.1016/j.epidem.2019.100363

Endo, Akira; Nishiura, Hiroshi; (2018) The Role of Migration in Maintaining the Transmission of Avian Influenza in Waterfowl: A Multisite Multispecies Transmission Model along East Asian-Australian Flyway. The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale, 2018. 3420535-. ISSN 1712-9532 DOI: https://doi.org/10.1155/2018/3420535

Matsuyama, Ryota; Akhmetzhanov, Andrei R; Endo, Akira; Lee, Hyojung; Yamaguchi, Takayuki; Tsuzuki, Shinya; Nishiura, Hiroshi; (2018) Uncertainty and sensitivity analysis of the basic reproduction number of diphtheria: a case study of a Rohingya refugee camp in Bangladesh, November-December 2017. PEERJ, 6 (4). e4583-. ISSN 2167-8359 DOI: https://doi.org/10.7717/peerj.4583

Nishiura, Hiroshi; Lee, Hyojung; Yuan, Baoyin; Endo, Akira; Akhmetzhanov, Andrei R; Chowell, Gerardo; (2018) Infectious disease risks among refugees from North Korea. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES, 66. pp. 22-25. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2017.10.021