Coll, Francesc; Phelan, Jody; Hill-Cawthorne, Grant A; Nair, Mridul B; Mallard, Kim; Ali, Shahjahan; Abdallah, Abdallah M; Alghamdi, Saad; Alsomali, Mona; Ahmed, Abdallah O; +41 more... Portelli, Stephanie; Oppong, Yaa; Alves, Adriana; Bessa, Theolis Barbosa; Campino, Susana; Caws, Maxine; Chatterjee, Anirvan; Crampin, Amelia C; Dheda, Keertan; Furnham, Nicholas; Glynn, Judith R; Grandjean, Louis; Minh Ha, Dang; Hasan, Rumina; Hasan, Zahra; Hibberd, Martin L; Joloba, Moses; Jones-López, Edward C; Matsumoto, Tomoshige; Miranda, Anabela; Moore, David J; Mocillo, Nora; Panaiotov, Stefan; Parkhill, Julian; Penha, Carlos; Perdigão, João; Portugal, Isabel; Rchiad, Zineb; Robledo, Jaime; Sheen, Patricia; Shesha, Nashwa Talaat; Sirgel, Frik A; Sola, Christophe; Oliveira Sousa, Erivelton; Streicher, Elizabeth M; Helden, Paul Van; Viveiros, Miguel; Warren, Robert M; McNerney, Ruth; Pain, Arnab; Clark, Taane G; (2018) Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis. Nature genetics, 50 (2). pp. 307-316. ISSN 1061-4036 DOI: https://doi.org/10.1038/s41588-017-0029-0

Phelan, Jody; de Sessions, Paola Florez; Tientcheu, Leopold; Perdigao, Joao; Machado, Diana; Hasan, Rumina; Hasan, Zahra; Bergval, Indra L; Anthony, Richard; McNerney, Ruth; +6 more... Antonio, Martin; Portugal, Isabel; Viveiros, Miguel; Campino, Susana; Hibberd, Martin L; Clark, Taane G; (2018) Methylation in Mycobacterium tuberculosis is lineage specific with associated mutations present globally. Scientific reports, 8 (1). 160-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-18188-y

Kanji, A; Hasan, R; Ali, A; Zaver, A; Zhang, Y; Imtiaz, K; Shi, W; Clark, TG; McNerney, R; Phelan, J; +3 more... Rao, S; Shafiq, S; Hasan, Z; (2017) Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan. Tuberculosis (Edinburgh, Scotland), 107. pp. 20-30. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2017.07.012

Kanji, Akbar; Hasan, Rumina; Ali, Asho; Zaver, Ambreen; Zhang, Ying; Imtiaz, Kehkashan; Shi, Wanliang; Clark, Taane G; McNerney, Ruth; Phelan, Jody; +3 more... Rao, Shoaib; Shafiq, Samreen; Hasan, Zahra; (2017) Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan. Tuberculosis (Edinburgh, Scotland), 107 (Supple). pp. 20-30. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2017.07.012 Full text not available from this repository.

Ali, Asho; Hasan, Zahra; McNerney, Ruth; Mallard, Kim; Hill-Cawthorne, Grant; Coll, Francesc; Nair, Mridul; Pain, Arnab; Clark, Taane G; Hasan, Rumina; (2015) Whole genome sequencing based characterization of extensively drug-resistant Mycobacterium tuberculosis isolates from Pakistan. PloS one, 10 (2). e0117771-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0117771

Benavente, Ernest D; Coll, Francesc; Furnham, Nick; McNerney, Ruth; Glynn, Judith R; Campino, Susana; Pain, Arnab; Mohareb, Fady R; Clark, Taane G; (2015) PhyTB: Phylogenetic tree visualisation and sample positioning for M. tuberculosis. BMC Bioinformatics, 16 (1). 155-. ISSN 1471-2105 DOI: https://doi.org/10.1186/s12859-015-0603-3

Coll, Francesc; McNerney, Ruth; Preston, Mark D; Guerra-Assunção, José Afonso; Warry, Andrew; Hill-Cawthorne, Grant; Mallard, Kim; Nair, Mridul; Miranda, Anabela; Alves, Adriana; +9 more... Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Hasan, Zahra; Hasan, Rumina; Glynn, Judith R; Martin, Nigel; Pain, Arnab; Clark, Taane G; (2015) Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences. Genome medicine, 7 (1). 51-. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-015-0164-0

Dalla Costa, Elis R; Vasconcelos, Sidra EG; Esteves, Leonardo S; Gomes, Harrison M; Gomes, Lia L; da Silva, Pedro Almeida; Perdigão, João; Portugal, Isabel; Viveiros, Miguel; McNerney, Ruth; +6 more... Pain, Arnab; Clark, Taane G; Rastogi, Nalin; Unis, Gisela; Rossetti, Maria Lucia R; Suffys, Philip Noel; (2015) Multidrug-Resistant Mycobacterium tuberculosis of the Latin American Mediterranean Lineage, Wrongly Identified as Mycobacterium pinnipedii (Spoligotype International Type 863 [SIT863]), Causing Active Tuberculosis in South Brazil. Journal of clinical microbiology, 53 (12). pp. 3805-3811. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02012-15 Full text not available from this repository.

Glynn, Judith R; Guerra-Assunção, José Afonso; Houben, Rein MGJ; Sichali, Lifted; Mzembe, Themba; Mwaungulu, Lorrain K; Mwaungulu, J Nimrod; McNerney, Ruth; Khan, Palwasha; Parkhill, Julian; +2 more... Crampin, Amelia C; Clark, Taane G; (2015) Whole Genome Sequencing Shows a Low Proportion of Tuberculosis Disease Is Attributable to Known Close Contacts in Rural Malawi. PloS one, 10 (7). e0132840-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0132840

Guerra-Assunção, JA; Crampin, AC; Houben, RMGJ; Mzembe, T; Mallard, K; Coll, F; Khan, P; Banda, L; Chiwaya, A; Pereira, RPA; +5 more... McNerney, R; Fine, PEM; Parkhill, J; Clark, TG; Glynn, JR; (2015) Large-scale whole genome sequencing of M. tuberculosis provides insights into transmission in a high prevalence area. eLife, 4 (4). ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.05166

Hernández, P; Punchak, M; Camacho, M; Hepple, P; McNerney, R; (2015) Investigating the quality of expectorated sputum for tuberculosis diagnosis in Bolivia. The international journal of tuberculosis and lung disease, 19 (9). pp. 1065-1067. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.14.0700 Full text not available from this repository.

Kanji, Akbar; Hasan, Zahra; Ali, Asho; McNerney, Ruth; Mallard, Kim; Coll, Francesc; Hill-Cawthorne, Grant; Nair, Mridul; Clark, Taane G; Zaver, Ambreen; +2 more... Jafri, Sana; Hasan, Rumina; (2015) Characterization of genomic variations in SNPs of PE_PGRS genes reveals deletions and insertions in extensively drug resistant (XDR) M. tuberculosis strains from Pakistan. International journal of mycobacteriology, 4 (1). pp. 73-79. ISSN 2212-5531 DOI: https://doi.org/10.1016/j.ijmyco.2014.11.049

McNerney, Ruth; Cunningham, Jane; Hepple, Pamela; Zumla, Alimuddin; (2015) New tuberculosis diagnostics and rollout. International journal of infectious diseases, 32. pp. 81-86. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2015.01.012

McNerney, Ruth; Peeling, Rosanna W; (2015) Regulatory In Vitro Diagnostics Landscape in Africa: Update on Regional Activities. Clinical infectious diseases, 61Supp (suppl ). S135-S140. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ553 Full text not available from this repository.

McNerney, Ruth; Zumla, Alimuddin; (2015) Impact of the Xpert MTB/RIF diagnostic test for tuberculosis in countries with a high burden of disease. Current opinion in pulmonary medicine, 21 (3). pp. 304-308. ISSN 1070-5287 DOI: https://doi.org/10.1097/MCP.0000000000000161 Full text not available from this repository.

Nicoara, Simona C; Turner, Nicholas W; Minnikin, David E; Lee, Oona Y-C; O'Sullivan, Denise M; McNerney, Ruth; Mutetwa, Reggie; Corbett, Liz E; Morgan, Geraint H; (2015) Development of sample clean up methods for the analysis of Mycobacterium tuberculosis methyl mycocerosate biomarkers in sputum extracts by gas chromatography-mass spectrometry. Journal of chromatography B, Analytical technologies in the biomedical and life sciences, 986-98. pp. 135-142. ISSN 1570-0232 DOI: https://doi.org/10.1016/j.jchromb.2015.02.010

Senthilingam, Meera; Pietersen, Elize; McNerney, Ruth; Te Riele, Julian; Sedres, Pat; Wilson, Ruth; Dheda, Keertan; (2015) Lifestyle, attitudes and needs of uncured XDR-TB patients living in the communities of South Africa: a qualitative study. Tropical medicine & international health, 20 (9). pp. 1155-1161. ISSN 1360-2276 DOI: https://doi.org/10.1111/tmi.12532 Full text not available from this repository.

Bergval, Indra; Coll, Francesc; Schuitema, Anja; de Ronde, Hans; Mallard, Kim; Pain, Arnab; McNerney, Ruth; Clark, Taane G; Anthony, Richard M; (2014) A proportion of mutations fixed in the genomes of in vitro selected isogenic drug-resistant Mycobacterium tuberculosis mutants can be detected as minority variants in the parent culture. FEMS microbiology letters, 362 (2). pp. 1-7. ISSN 0378-1097 DOI: https://doi.org/10.1093/femsle/fnu037

Boyle, David S; McNerney, Ruth; Teng Low, Hwee; Leader, Brandon Troy; Pérez-Osorio, Ailyn C; Meyer, Jessica C; O'Sullivan, Denise M; Brooks, David G; Piepenburg, Olaf; Forrest, Matthew S; (2014) Rapid detection of Mycobacterium tuberculosis by recombinase polymerase amplification. PloS one, 9 (8). e103091-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0103091

Coll, Francesc; McNerney, Ruth; Guerra-Assunção, José Afonso; Glynn, Judith R; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Pain, Arnab; Martin, Nigel; Clark, Taane G; (2014) A robust SNP barcode for typing Mycobacterium tuberculosis complex strains. Nature communications, 5 (1). 4812-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms5812

Coll, Francesc; Preston, Mark; Guerra-Assunção, José Afonso; Hill-Cawthorn, Grant; Harris, David; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Drobniewski, Francis; Gagneux, Sebastien; +6 more... Glynn, Judith R; Pain, Arnab; Parkhill, Julian; McNerney, Ruth; Martin, Nigel; Clark, Taane G; (2014) PolyTB: a genomic variation map for Mycobacterium tuberculosis. Tuberculosis (Edinburgh, Scotland), 94 (3). pp. 346-354. ISSN 1472-9792 DOI: https://doi.org/10.1016/j.tube.2014.02.005

Guerra-Assunção, José Afonso; Houben, Rein MGJ; Crampin, Amelia C; Mzembe, Themba; Mallard, Kim; Coll, Francesc; Khan, Palwasha; Banda, Louis; Chiwaya, Arthur; Pereira, Rui PA; +5 more... McNerney, Ruth; Harris, David; Parkhill, Julian; Clark, Taane G; Glynn, Judith R; (2014) Recurrence due to relapse or reinfection with Mycobacterium tuberculosis: a whole-genome sequencing approach in a large, population-based cohort with a high HIV infection prevalence and active follow-up. The Journal of infectious diseases, 211 (7). pp. 1154-1163. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiu574

Kirenga, Bruce J; Levin, Jonathan; Ayakaka, Irene; Worodria, William; Reilly, Nancy; Mumbowa, Francis; Nabanjja, Helen; Nyakoojo, Grace; Fennelly, Kevin; Nakubulwa, Susan; +9 more... Joloba, Moses; Okwera, Alphonse; Eisenach, Kathleen D; McNerney, Ruth; Elliott, Alison M; Mugerwa, Roy D; Smith, Peter G; Ellner, Jerrold J; Jones-López, Edward C; (2014) Treatment outcomes of new tuberculosis patients hospitalized in Kampala, Uganda: a prospective cohort study. PloS one, 9 (3). e90614-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0090614

McNerney, R; Sollis, K; Peeling, R; (2014) Improving access to new diagnostics through harmonised regulation: priorities for action. Afr J Lab Med, 3 (1). https://researchonline.lshtm.ac.uk/id/eprint/1649067 Full text not available from this repository.

McNerney, Ruth; Sollis, Kimberly; Peeling, Rosanna W; (2014) Improving access to new diagnostics through harmonised regulation: priorities for action. African journal of laboratory medicine, 3 (1). 123-. ISSN 2225-2002 DOI: https://doi.org/10.4102/ajlm.v3i1.123

Peeling, Rosanna W; McNerney, Ruth; (2014) Emerging technologies in point-of-care molecular diagnostics for resource-limited settings. Expert review of molecular diagnostics, 14 (5). pp. 525-534. ISSN 1473-7159 DOI: https://doi.org/10.1586/14737159.2014.915748 Full text not available from this repository.

Perdigão, João; Silva, Hugo; Machado, Diana; Macedo, Rita; Maltez, Fernando; Silva, Carla; Jordao, Luisa; Couto, Isabel; Mallard, Kim; Coll, Francesc; +6 more... Hill-Cawthorne, Grant A; McNerney, Ruth; Pain, Arnab; Clark, Taane G; Viveiros, Miguel; Portugal, Isabel; (2014) Unraveling Mycobacterium tuberculosis genomic diversity and evolution in Lisbon, Portugal, a highly drug resistant setting. BMC genomics, 15 (1). 991-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-15-991

Rugera, Simon Peter; McNerney, Ruth; Poon, Albert K; Akimana, Gladys; Mariki, Rehema Forgen; Kajumbula, Henry; Kamau, Elizabeth; Mpawenimana, Servilien; Said, Said Yusuf; Toroitich, Anthony; +4 more... Ronoh, Wesley; Sollis, Kimberly A; Sonoiya, Stanley; Peeling, Rosanna W; (2014) Regulation of medical diagnostics and medical devices in the East African community partner states. BMC health services research, 14 (1). 524-. ISSN 1472-6963 DOI: https://doi.org/10.1186/s12913-014-0524-2

Abubakar, Ibrahim; Zignol, Matteo; Falzon, Dennis; Raviglione, Mario; Ditiu, Lucica; Masham, Susan; Adetifa, Ifedayo; Ford, Nathan; Cox, Helen; Lawn, Stephen D; +21 more... Marais, Ben J; McHugh, Timothy D; Mwaba, Peter; Bates, Matthew; Lipman, Marc; Zijenah, Lynn; Logan, Simon; McNerney, Ruth; Zumla, Adam; Sarda, Krishna; Nahid, Payam; Hoelscher, Michael; Pletschette, Michel; Memish, Ziad A; Kim, Peter; Hafner, Richard; Cole, Stewart; Migliori, Giovanni Battista; Maeurer, Markus; Schito, Marco; Zumla, Alimuddin; (2013) Drug-resistant tuberculosis: time for visionary political leadership. The Lancet infectious diseases, 13 (6). pp. 529-539. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(13)70030-6

Clark, Taane G; Mallard, Kim; Coll, Francesc; Preston, Mark; Assefa, Samuel; Harris, David; Ogwang, Sam; Mumbowa, Francis; Kirenga, Bruce; O'Sullivan, Denise M; +8 more... Okwera, Alphonse; Eisenach, Kathleen D; Joloba, Moses; Bentley, Stephen D; Ellner, Jerrold J; Parkhill, Julian; Jones-López, Edward C; McNerney, Ruth; (2013) Elucidating emergence and transmission of multidrug-resistant tuberculosis in treatment experienced patients by whole genome sequencing. PloS one, 8 (12). e83012-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0083012

Lawn, Stephen D; Mwaba, Peter; Bates, Matthew; Piatek, Amy; Alexander, Heather; Marais, Ben J; Cuevas, Luis E; McHugh, Timothy D; Zijenah, Lynn; Kapata, Nathan; +9 more... Abubakar, Ibrahim; McNerney, Ruth; Hoelscher, Michael; Memish, Ziad A; Migliori, Giovanni Battista; Kim, Peter; Maeurer, Markus; Schito, Marco; Zumla, Alimuddin; (2013) Advances in tuberculosis diagnostics: the Xpert MTB/RIF assay and future prospects for a point-of-care test. The Lancet infectious diseases, 13 (4). pp. 349-361. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(13)70008-2 Full text not available from this repository.

McNerney, R; (2013) Upping the Anti. International Innovation. http://www.research-europe.com/index.php/2013/03/u... Full text not available from this repository.

Nicoara, Simona C; Minnikin, David E; Lee, Oona CY; O'Sullivan, Denise M; McNerney, Ruth; Pillinger, Collin T; Wright, Ian P; Morgan, Geraint H; (2013) Development and optimization of a gas chromatography/mass spectrometry method for the analysis of thermochemolytic degradation products of phthiocerol dimycocerosate waxes found in Mycobacterium tuberculosis. Rapid communications in mass spectrometry, 27 (21). pp. 2374-2382. ISSN 0951-4198 DOI: https://doi.org/10.1002/rcm.6694

Punchak, Mary; Hernandez, Pilar; Bottomley, Christian; Jemio, Carla; Camacho, Mirtha; McNerney, Ruth; (2013) Sociodemographic basis of tuberculosis knowledge in Bolivia. The international journal of tuberculosis and lung disease, 17 (9). pp. 1245-1246. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.13.0432 Full text not available from this repository.

Coll, Francesc; Mallard, Kim; Preston, Mark D; Bentley, Stephen; Parkhill, Julian; McNerney, Ruth; Martin, Nigel; Clark, Taane G; (2012) SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences. Bioinformatics (Oxford, England), 28 (22). pp. 2991-2993. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/bts544

Hepple, P; Ford, N; McNerney, R; (2012) Microscopy compared to culture for the diagnosis of tuberculosis in induced sputum samples: a systematic review. The international journal of tuberculosis and lung disease, 16 (5). pp. 579-88. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.11.0617 Full text not available from this repository.

Hepple, P; Ford, N; McNerney, R; (2012) Microscopy compared to culture for the diagnosis of tuberculosis in induced sputum samples: a systematic review. The international journal of tuberculosis and lung disease, 16 (5). pp. 579-588. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.11.0617 Full text not available from this repository.

Hepple, Pamela; (2012) Evaluation of a novel concentration method for the microscopic detection of 'Mycobacterium tuberculosis' from induced sputum. DrPH thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682444

McNerney, R; (2012) Taking Down TB. Public Service Review: UK Science & Technology (6). http://www.publicservice.co.uk/article.asp?publica... Full text not available from this repository.

McNerney, Ruth; Maeurer, Markus; Abubakar, Ibrahim; Marais, Ben; McHugh, Timothy D; Ford, Nathan; Weyer, Karin; Lawn, Steve; Grobusch, Martin P; Memish, Ziad; +20 more... Squire, S Bertel; Pantaleo, Giuseppe; Chakaya, Jeremiah; Casenghi, Martina; Migliori, Giovanni-Batista; Mwaba, Peter; Zijenah, Lynn; Hoelscher, Michael; Cox, Helen; Swaminathan, Soumya; Kim, Peter S; Schito, Marco; Harari, Alexandre; Bates, Matthew; Schwank, Samana; O'Grady, Justin; Pletschette, Michel; Ditui, Lucica; Atun, Rifat; Zumla, Alimuddin; (2012) Tuberculosis diagnostics and biomarkers: needs, challenges, recent advances, and opportunities. The Journal of infectious diseases, 205 Su (suppl_). S147-S158. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jir860 Full text not available from this repository.

McNerney, Ruth; Mallard, Kim; Okolo, Phyllis Ifeoma; Turner, Claire; (2012) Production of volatile organic compounds by mycobacteria. FEMS microbiology letters, 328 (2). pp. 150-156. ISSN 0378-1097 DOI: https://doi.org/10.1111/j.1574-6968.2011.02493.x Full text not available from this repository.

O'Sullivan, Denise M; Nicoara, Simona C; Mutetwa, Reggie; Mungofa, Stanley; Lee, Oona Y-C; Minnikin, David E; Bardwell, Max W; Corbett, Elizabeth L; McNerney, Ruth; Morgan, Geraint H; (2012) Detection of Mycobacterium tuberculosis in sputum by gas chromatography-mass spectrometry of methyl mycocerosates released by thermochemolysis. PloS one, 7 (3). e32836-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0032836

Zumla, Alimuddin; Abubakar, Ibrahim; Raviglione, Mario; Hoelscher, Michael; Ditiu, Lucica; McHugh, Timothy D; Squire, S Bertel; Cox, Helen; Ford, Nathan; McNerney, Ruth; +14 more... Marais, Ben; Grobusch, Martin; Lawn, Stephen D; Migliori, Giovanni-Battista; Mwaba, Peter; O'Grady, Justin; Pletschette, Michel; Ramsay, Andrew; Chakaya, Jeremiah; Schito, Marco; Swaminathan, Soumya; Memish, Ziad; Maeurer, Markus; Atun, Rifat; (2012) Drug-resistant tuberculosis--current dilemmas, unanswered questions, challenges, and priority needs. The Journal of infectious diseases, 205 Su (suppl_). S228-S240. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jir858 Full text not available from this repository.

LSHTM; (2011) Need For Research Urged At World Tuberculosis Day Celebrations In London - 23 March 2011. [Podcast] http://soundcloud.com/lshtm/need-for-research-urge...

LSHTM; (2011) Better Point-Of-Care Testing For TB Urgently Needed - 1 March 2011. [Podcast] http://soundcloud.com/lshtm/better-point-of-care-t...

Dawson, Lisa F; Donahue, Elizabeth H; Cartman, Stephen T; Barton, Richard H; Bundy, Jake; McNerney, Ruth; Minton, Nigel P; Wren, Brendan W; (2011) The analysis of para-cresol production and tolerance in Clostridium difficile 027 and 012 strains. BMC microbiology, 11 (1). 86-. ISSN 1471-2180 DOI: https://doi.org/10.1186/1471-2180-11-86

Jones-López, Edward C; Ayakaka, Irene; Levin, Jonathan; Reilly, Nancy; Mumbowa, Francis; Dryden-Peterson, Scott; Nyakoojo, Grace; Fennelly, Kevin; Temple, Beth; Nakubulwa, Susan; +8 more... Joloba, Moses L; Okwera, Alphonse; Eisenach, Kathleen D; McNerney, Ruth; Elliott, Alison M; Ellner, Jerrold J; Smith, Peter G; Mugerwa, Roy D; (2011) Effectiveness of the standard WHO recommended retreatment regimen (category II) for tuberculosis in Kampala, Uganda: a prospective cohort study. PLoS medicine, 8 (3). e1000427-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1000427

Lai, Ka-Man; Bottomley, Christian; McNerney, Ruth; (2011) Propagation of respiratory aerosols by the vuvuzela. PloS one, 6 (5). e20086-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0020086

McNerney, Ruth; Daley, Peter; (2011) Towards a point-of-care test for active tuberculosis: obstacles and opportunities. Nature reviews Microbiology, 9 (3). pp. 204-213. ISSN 1740-1526 DOI: https://doi.org/10.1038/nrmicro2521 Full text not available from this repository.

McNerney, Ruth; Ferrara, Giovanni; O'Grady, Justin; Maeurer, Markus; Zumla, Alimuddin; (2011) Screening of immigrants in the UK for latent tuberculosis. Expert review of respiratory medicine, 5 (4). pp. 483-486. ISSN 1747-6348 DOI: https://doi.org/10.1586/ers.11.45 Full text not available from this repository.

Mwaba, Peter; McNerney, Ruth; Grobusch, Martin Peter; O'Grady, Justin; Bates, Matthew; Kapata, Nathan; Maeurer, Markus; Zumla, Alimuddin; (2011) Achieving STOP TB Partnership goals: perspectives on development of new diagnostics, drugs and vaccines for tuberculosis. Tropical medicine & international health, 16 (7). pp. 819-827. ISSN 1360-2276 DOI: https://doi.org/10.1111/j.1365-3156.2011.02777.x Full text not available from this repository.

Peeling, R; McNerney, R; (2011) Increasing access to diagnostics through technology transfer and local production. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/21167 Full text not available from this repository.

Sharaf Eldin, Ghada S; Fadl-Elmula, Imad; Ali, Mohammed S; Ali, Ahmed B; Salih, Abdel Latif Ga; Mallard, Kim; Bottomley, Christian; McNerney, Ruth; (2011) Tuberculosis in Sudan: a study of Mycobacterium tuberculosis strain genotype and susceptibility to anti-tuberculosis drugs. BMC infectious diseases, 11 (1). 219-. ISSN 1471-2334 DOI: https://doi.org/10.1186/1471-2334-11-219

Everett, Dean B; Baisely, Kathy J; McNerney, Ruth; Hambleton, Ian; Chirwa, Tobias; Ross, David A; Changalucha, John; Watson-Jones, Deborah; Helmby, Helena; Dunne, David W; +2 more... Mabey, David; Hayes, Richard J; (2010) Association of schistosomiasis with false-positive HIV test results in an African adolescent population. Journal of clinical microbiology, 48 (5). pp. 1570-1577. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02264-09 Full text not available from this repository.

Glynn, Judith R; Alghamdi, Saad; Mallard, Kim; McNerney, Ruth; Ndlovu, Richard; Munthali, Lumbani; Houben, Rein M; Fine, Paul EM; French, Neil; Crampin, Amelia C; (2010) Changes in Mycobacterium tuberculosis genotype families over 20 years in a population-based study in Northern Malawi. PloS one, 5 (8). e12259-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0012259

Mallard, Kim; McNerney, Ruth; Crampin, Amelia C; Houben, Rein; Ndlovu, Richard; Munthali, Lumbani; Warren, Robin M; French, Neil; Glynn, Judith R; (2010) Molecular detection of mixed infections of Mycobacterium tuberculosis strains in sputum samples from patients in Karonga District, Malawi. Journal of clinical microbiology, 48 (12). pp. 4512-4518. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01683-10 Full text not available from this repository.

McNerney, R; (2010) Symposium: Point of care tests for tuberculosis. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/3664 Full text not available from this repository.

McNerney, Ruth; Wondafrash, Beyene A; Amena, Kebede; Tesfaye, Ato; McCash, Elaine M; Murray, Nicol J; (2010) Field test of a novel detection device for Mycobacterium tuberculosis antigen in cough. BMC infectious diseases, 10 (1). 161-. ISSN 1471-2334 DOI: https://doi.org/10.1186/1471-2334-10-161

Sester, M; Giehl, C; McNerney, R; Kampmann, B; Walzl, G; Cuchí, P; Wingfield, C; Lange, C; Migliori, GB; Kritski, AL; +2 more... Meyerhans, A; European Network for global cooperation in the field of AIDS and; (2010) Challenges and perspectives for improved management of HIV/Mycobacterium tuberculosis co-infection. The European respiratory journal, 36 (6). pp. 1242-1247. ISSN 0903-1936 DOI: https://doi.org/10.1183/09031936.00040910 Full text not available from this repository.

Mallard, Kim; Sharaf Eldin, Ghada S; McNerney, Ruth; (2009) ScreenTape as a tool for the rapid differentiation of Mycobacterium tuberculosis isolates. Journal of medical microbiology, 58 (Pt 9). pp. 1266-1268. ISSN 0022-2615 DOI: https://doi.org/10.1099/jmm.0.008219-0 Full text not available from this repository.

Ogwang, Sam; Asiimwe, Benon B; Traore, Hamidou; Mumbowa, Francis; Okwera, Alphonse; Eisenach, Kathleen D; Kayes, Susan; Jones-López, Edward C; McNerney, Ruth; Worodria, William; +5 more... Ayakaka, Irene; Mugerwa, Roy D; Smith, Peter G; Ellner, Jerrold; Joloba, Moses L; (2009) Comparison of rapid tests for detection of rifampicin-resistant Mycobacterium tuberculosis in Kampala, Uganda. BMC infectious diseases, 9 (1). 139-. ISSN 1471-2334 DOI: https://doi.org/10.1186/1471-2334-9-139

Yzquierdo, SL; Kumar, V; Lemus, D; Montoro, E; McNerney, R; (2009) Mycobacteriophage and control of tuberculosis. In: HoraceTAdams, (ed.) Contemporary Trends in Bacteriophage Research. Nova Science Publishers, Inc., pp. 353-373. ISBN 978-1-60692-181-4 https://researchonline.lshtm.ac.uk/id/eprint/5915 Full text not available from this repository.

Mueller, DH; Mwenge, L; Muyoyeta, M; Muvwimi, MW; Tembwe, R; McNerney, R; Godfrey-Faussett, P; Ayles, HM; (2008) Costs and cost-effectiveness of tuberculosis cultures using solid and liquid media in a developing country. The international journal of tuberculosis and lung disease, 12 (10). pp. 1196-1202. ISSN 1027-3719 https://researchonline.lshtm.ac.uk/id/eprint/6986 Full text not available from this repository.

Temple, Beth; Ayakaka, Irene; Ogwang, Sam; Nabanjja, Helen; Kayes, Susan; Nakubulwa, Susan; Worodria, William; Levin, Jonathan; Joloba, Moses; Okwera, Alphonse; +7 more... Eisenach, Kathleen D; McNerney, Ruth; Elliott, Alison M; Smith, Peter G; Mugerwa, Roy D; Ellner, Jerrold J; Jones-López, Edward C; (2008) Rate and amplification of drug resistance among previously-treated patients with tuberculosis in Kampala, Uganda. Clinical infectious diseases, 47 (9). pp. 1126-1134. ISSN 1058-4838 DOI: https://doi.org/10.1086/592252 Full text not available from this repository.

Zager, Ellen M; McNerney, Ruth; (2008) Multidrug-resistant tuberculosis. BMC infectious diseases, 8 (1). 10-. ISSN 1471-2334 DOI: https://doi.org/10.1186/1471-2334-8-10

McNerney, Ruth; Mallard, Kim; Urassa, Honorathy MR; Lemma, Eshetu; Donoghue, Helen D; (2007) Colorimetric phage-based assay for detection of rifampin-resistant Mycobacterium tuberculosis. Journal of clinical microbiology, 45 (4). pp. 1330-1332. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02028-06 Full text not available from this repository.

Ramazanzadah, R; McNerney, R; (2007) Variable number of tandem repeats (VNTR) and its application in bacterial epidemiology. Pakistan Journal of Biological Sciences, 10 (16). pp. 2612-2621. https://researchonline.lshtm.ac.uk/id/eprint/10150 Full text not available from this repository.

Ramazanzadeh, R; McNerney, R; Traore, H; (2007) Detection of Mycobacterium tuberculosis strains with MIRU-typing, spoligotyping, and RFLP methods, isolated from Ethiopian patients. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/6238 Full text not available from this repository.

Traore, Hamidou; Ogwang, Sam; Mallard, Kim; Joloba, Moses L; Mumbowa, Francis; Narayan, Kalpana; Kayes, Susan; Jones-Lopez, Edward C; Smith, Peter G; Ellner, Jerrold J; +3 more... Mugerwa, Roy D; Eisenach, Kathleen D; McNerney, Ruth; (2007) Low-cost rapid detection of rifampicin resistant tuberculosis using bacteriophage in Kampala, Uganda. Annals of clinical microbiology and antimicrobials, 6 (1). 1-. ISSN 1476-0711 DOI: https://doi.org/10.1186/1476-0711-6-1

Doulla, B; Mattee, MIN; McNerney, R; (2006) Quality assessment of sputum smear microscopy for detection of acid fast bacilli in peripheral health care facilities in Dar es Salaam, Tanzania. East African medical journal, 83 (6). pp. 63-67. ISSN 0012-835X https://researchonline.lshtm.ac.uk/id/eprint/11725 Full text not available from this repository.

Yzquierdo, Sergio Luis; Lemus, Dihadenys; Echemendia, Miguel; Montoro, Ernesto; McNerney, Ruth; Martin, Anandi; Palomino, Juan Carlos; (2006) Evaluation of phage assay for rapid phenotypic detection of rifampicin resistance in Mycobacterium tuberculosis. Annals of clinical microbiology and antimicrobials, 5 (1). 11-. ISSN 1476-0711 DOI: https://doi.org/10.1186/1476-0711-5-11

McNerney, R; Traoré, H; (2005) Mycobacteriophage and their application to disease control. Journal of applied microbiology, 99 (2). pp. 223-233. ISSN 1364-5072 DOI: https://doi.org/10.1111/j.1365-2672.2005.02596.x Full text not available from this repository.

Mshanga, IM; Matee, MIN; Nyambo, TB; McNerney, R; (2005) Evaluation of Dot-Blot and Phage replication techniques for detection of drug resistant Mycobacterium tuberculosis. Tanzania Medical Journal, 20 (1). pp. 22-25. https://researchonline.lshtm.ac.uk/id/eprint/11972 Full text not available from this repository.

Símboli, Norberto; Takiff, Howard; McNerney, Ruth; López, Beatriz; Martin, Anandi; Palomino, Juan Carlos; Barrera, Lucía; Ritacco, Viviana; (2005) In-house phage amplification assay is a sound alternative for detecting rifampin-resistant Mycobacterium tuberculosis in low-resource settings. Antimicrobial agents and chemotherapy, 49 (1). pp. 425-427. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.49.1.425-427.2005 Full text not available from this repository.

Mbulo, GMK; Kambashi, BS; Kinkese, J; Tembwe, R; Shumba, B; Godfrey-Faussett, P; McNerney, R; (2004) Comparison of two bacteriophage tests and nucleic acid amplification for the diagnosis of pulmonary tuberculosis in sub-Saharan Africa. The international journal of tuberculosis and lung disease, 8 (11). pp. 1342-1347. ISSN 1027-3719 https://researchonline.lshtm.ac.uk/id/eprint/14010 Full text not available from this repository.

McNerney, R; (2004) Molecular technology and the diagnosis of tuberculosis. Saudi Laboratory Bulletin (9). pp. 42-43. https://researchonline.lshtm.ac.uk/id/eprint/14724 Full text not available from this repository.

McNerney, Ruth; Kambashi, Bupe S; Kinkese, Juliana; Tembwe, Ruth; Godfrey-Faussett, Peter; (2004) Development of a bacteriophage phage replication assay for diagnosis of pulmonary tuberculosis. Journal of clinical microbiology, 42 (5). pp. 2115-2120. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.42.5.2115-2120.2004 Full text not available from this repository.

Walsh, A; McNerney, R; (2004) Guidelines for establishing trials of new tests to diagnose tuberculosis in endemic countries. The international journal of tuberculosis and lung disease, 8 (5). pp. 609-613. ISSN 1027-3719 https://researchonline.lshtm.ac.uk/id/eprint/14711 Full text not available from this repository.

McNerney, R; (2003) Molecular Diagnostics: A Training and Study Guide. Gregory J. Tsongalis and William B. Coleman. Washington, DC: AACC Press, 2002, 374 pp., $71.00 ($57.00 AACC members), softcover. ISBN 1-890883-76-X [Book Review]. Clinical chemistry, 49 (2). 348-. ISSN 0009-9147 https://researchonline.lshtm.ac.uk/id/eprint/17954 Full text not available from this repository.

McNerney, R; (2002) Workplace protection from tuberculosis. Africa health, 24 (6). pp. 15-16. ISSN 0141-9536 https://researchonline.lshtm.ac.uk/id/eprint/15545 Full text not available from this repository.

McNerney, R; (2002) Mutagens in the medical laboratory: what can be done? Africa health, 25 (1). pp. 14-15. ISSN 0141-9536 https://researchonline.lshtm.ac.uk/id/eprint/15546 Full text not available from this repository.

McNerney, Ruth; (2002) Phage tests for diagnosis and drug susceptibility testing. The international journal of tuberculosis and lung disease, 6 (12). pp. 1129-1130. ISSN 1027-3719 https://researchonline.lshtm.ac.uk/id/eprint/16799 Full text not available from this repository.

Corbett, E; Godfrey-Faussett, P; McNerney, R; Movahedzadeh, F; Porter, JDH; Stoker, N; (2001) Module for distance based learning. Study unit 502. London School of Hygiene and Tropical Medicine, University of London. https://researchonline.lshtm.ac.uk/id/eprint/17836 Full text not available from this repository.

Kambashi, B; Mbulo, G; McNerney, R; Tembwe, R; Kambashi, A; Tihon, V; Godfrey-Faussett, P; (2001) Utility of nucleic acid amplification techniques for the diagnosis of pulmonary tuberculosis in sub-Saharan Africa. The international journal of tuberculosis and lung disease, 5 (4). pp. 364-369. ISSN 1027-3719 https://researchonline.lshtm.ac.uk/id/eprint/16672 Full text not available from this repository.

McNerney, R; (2001) Micro-well phage replication assay for screening mycobacteria for resistance to rifampicin and streptomycin. In: Gillespie, SH, (ed.) Antibiotic Resistance Methods and Protocols. Humana Press Inc., Totowa, NY, p. 2310. https://researchonline.lshtm.ac.uk/id/eprint/17955 Full text not available from this repository.

McNerney, R; (2001) Phage replication technology for diagnosis and drug susceptibility testing. In: PARISH, T; STOKER, NG, (eds.) Mycobacterium Tuberculosis Protocols. Humana Press, Totowa. https://researchonline.lshtm.ac.uk/id/eprint/17956 Full text not available from this repository.