Langston, H; (2024) Study of the Determinants of Enteric Neuropathy in Experimental Chagas Disease. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04673217

Lesani, Mahbobeh; Gosmanov, Camil; Paun, Andrea; Lewis, Michael D; McCall, Laura-Isobel; (2022) Impact of Visceral Leishmaniasis on Local Organ Metabolism in Hamsters. Metabolites, 12 (9). p. 802. ISSN 2218-1989 DOI: https://doi.org/10.3390/metabo12090802

Matos, Gabriel Machado; Lewis, Michael D; Talavera-López, Carlos; Yeo, Matthew; Grisard, Edmundo C; Messenger, Louisa A; Miles, Michael A; Andersson, Björn; (2022) Microevolution of Trypanosoma cruzi reveals hybridization and clonal mechanisms driving rapid genome diversification. eLife, 11. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.75237

Ward, Alexander I; Lewis, Michael D; Taylor, Martin C; Kelly, John M; (2022) Incomplete Recruitment of Protective T Cells Is Associated with Trypanosoma cruzi Persistence in the Mouse Colon. Infection and Immunity, 90 (2). e0038221-. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00382-21

Khan, Archie A; Langston, Harry C; Costa, Fernanda C; Olmo, Francisco; Taylor, Martin C; McCann, Conor J; Kelly, John M; Lewis, Michael D; (2021) Local association of Trypanosoma cruzi chronic infection foci and enteric neuropathic lesions at the tissue micro-domain scale. PLoS pathogens, 17 (8). e1009864-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1009864

Talavera-López, Carlos; Messenger, Louisa A; Lewis, Michael D; Yeo, Matthew; Reis-Cunha, João Luís; Matos, Gabriel Machado; Bartholomeu, Daniella C; Calzada, José E; Saldaña, Azael; Ramírez, Juan David; +16 more... Guhl, Felipe; Ocaña-Mayorga, Sofía; Costales, Jaime A; Gorchakov, Rodion; Jones, Kathryn; Nolan, Melissa S; Teixeira, Santuza MR; Carrasco, Hernán José; Bottazzi, Maria Elena; Hotez, Peter J; Murray, Kristy O; Grijalva, Mario J; Burleigh, Barbara; Grisard, Edmundo C; Miles, Michael A; Andersson, Björn; (2021) Repeat-Driven Generation of Antigenic Diversity in a Major Human Pathogen, Trypanosoma cruzi. Frontiers in Cellular and Infection Microbiology, 11. 614665-. DOI: https://doi.org/10.3389/fcimb.2021.614665

Francisco, Amanda F; Jayawardhana, Shiromani; Olmo, Francisco; Lewis, Michael D; Wilkinson, Shane R; Taylor, Martin C; Kelly, John M; (2020) Challenges in Chagas Disease Drug Development. MOLECULES, 25 (12). p. 2799. ISSN 1420-3049 DOI: https://doi.org/10.3390/molecules25122799

Lewis, Michael D; Paun, Andrea; Romano, Audrey; Langston, Harry; Langner, Charlotte A; Moore, Ian N; Bock, Kevin W; Francisco, Amanda Fortes; Brenchley, Jason M; Sacks, David L; (2020) Fatal progression of experimental visceral leishmaniasis is associated with intestinal parasitism and secondary infection by commensal bacteria, and is delayed by antibiotic prophylaxis. PLoS pathogens, 16 (4). e1008456-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1008456

Mann, Gurdip Singh; Francisco, Amanda F; Jayawardhana, Shiromani; Taylor, Martin C; Lewis, Michael D; Olmo, Francisco; de Freitas, Elisangela Oliveira; Leoratti, Fabiana MS; López-Camacho, Cesar; Reyes-Sandoval, Arturo; +1 more... Kelly, John M; (2020) Drug-cured experimental Trypanosoma cruzi infections confer long-lasting and cross-strain protection. PLoS neglected tropical diseases, 14 (4). e0007717-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0007717

Pérez-Mazliah, Damián; Ward, Alexander I; Lewis, Michael D; (2020) Host-parasite dynamics in Chagas disease from systemic to hyper-local scales. PARASITE IMMUNOLOGY, 43 (2). e12786-. ISSN 0141-9838 DOI: https://doi.org/10.1111/pim.12786

Schwabl, Philipp; Maiguashca Sánchez, Jalil; Costales, Jaime A; Ocaña-Mayorga, Sofía; Segovia, Maikell; Carrasco, Hernán J; Hernández, Carolina; Ramírez, Juan David; Lewis, Michael D; Grijalva, Mario J; +1 more... Llewellyn, Martin S; (2020) Culture-free genome-wide locus sequence typing (GLST) provides new perspectives on Trypanosoma cruzi dispersal and infection complexity. PLOS GENETICS, 16 (12). e1009170-. ISSN 1553-7404 DOI: https://doi.org/10.1371/journal.pgen.1009170

Taylor, Martin C; Ward, Alexander I; Olmo, Francisco; Francisco, Amanda F; Jayawardhana, Shiromani; Costa, Fernanda C; Lewis, Michael D; Kelly, John M; (2020) Bioluminescent:Fluorescent Trypanosoma cruzi Reporter Strains as Tools for Exploring Chagas Disease Pathogenesis and Drug Activity. Current pharmaceutical design, 27 (14). pp. 1733-1740. ISSN 1381-6128 DOI: https://doi.org/10.2174/1381612826666201124113214

Taylor, Martin C; Ward, Alexander; Olmo, Francisco; Jayawardhana, Shiromani; Francisco, Amanda F; Lewis, Michael D; Kelly, John M; (2020) Intracellular DNA replication and differentiation of Trypanosoma cruzi is asynchronous within individual host cells in vivo at all stages of infection. PLoS neglected tropical diseases, 14 (3). e0008007-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0008007

Ward, Alexander I; Lewis, Michael D; Khan, Archie A; McCann, Conor J; Francisco, Amanda F; Jayawardhana, Shiromani; Taylor, Martin C; Kelly, John M; (2020) In Vivo Analysis of Trypanosoma cruzi Persistence Foci at Single-Cell Resolution. mBio, 11 (4). pp. 1-13. ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.01242-20

Hennig, K; Abi-Ghanem, J; Bunescu, A; Meniche, X; Biliaut, E; Ouattara, AD; Lewis, MD; Kelly, JM; Braillard, S; Courtemanche, G; +2 more... Chatelain, E; Béquet, F; (2019) Metabolomics, lipidomics and proteomics profiling of myoblasts infected with Trypanosoma cruzi after treatment with different drugs against Chagas disease. METABOLOMICS, 15 (9). 117-. ISSN 1573-3882 DOI: https://doi.org/10.1007/s11306-019-1583-5

Taylor, Martin C; Francisco, Amanda F; Jayawardhana, Shiromani; Mann, Gurdip Singh; Ward, Alexander I; Olmo, Francisco; Lewis, Michael D; Kelly, John M; (2019) Exploiting Genetically Modified Dual-Reporter Strains to Monitor Experimental Trypanosoma cruzi Infections and Host-Parasite Interactions. Springer New York, pp. 147-163. ISBN 9781493991471 DOI: https://doi.org/10.1007/978-1-4939-9148-8_11

Costa, Fernanda Cristina; Francisco, Amanda Fortes; Jayawardhana, Shiromani; Calderano, Simone Guedes; Lewis, Michael D; Olmo, Francisco; Beneke, Tom; Gluenz, Eva; Sunter, Jack; Dean, Samuel; +2 more... Kelly, John Morrison; Taylor, Martin Craig; (2018) Expanding the toolbox for Trypanosoma cruzi: A parasite line incorporating a bioluminescence-fluorescence dual reporter and streamlined CRISPR/Cas9 functionality for rapid in vivo localisation and phenotyping. PLoS neglected tropical diseases, 12 (4). e0006388-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0006388

Francisco, Amanda Fortes; Jayawardhana, Shiromani; Taylor, Martin C; Lewis, Michael D; Kelly, John M; (2018) Assessing the Effectiveness of Curative Benznidazole Treatment in Preventing Chronic Cardiac Pathology in Experimental Models of Chagas Disease. Antimicrobial agents and chemotherapy, 62 (10). ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00832-18

Lewis, Michael D; Francisco, Amanda F; Jayawardhana, Shiromani; Langston, Harry; Taylor, Martin C; Kelly, John M; (2018) Imaging the development of chronic Chagas disease after oral transmission. Scientific reports, 8 (1). 11292-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-29564-7

MacLean, Lorna M; Thomas, John; Lewis, Michael D; Cotillo, Ignacio; Gray, David W; De Rycker, Manu; (2018) Development of Trypanosoma cruzi in vitro assays to identify compounds suitable for progression in Chagas' disease drug discovery. PLoS neglected tropical diseases, 12 (7). e0006612-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0006612

Acosta, Nidia; López, Elsa; Lewis, Michael D; Llewellyn, Martin S; Gómez, Ana; Román, Fabiola; Miles, Michael A; Yeo, Matthew; (2017) Hosts and vectors of Trypanosoma cruzi discrete typing units in the Chagas disease endemic region of the Paraguayan Chaco. Parasitology, 144 (7). pp. 884-898. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182016002663

Campos, Mônica C; Phelan, Jody; Francisco, Amanda F; Taylor, Martin C; Lewis, Michael D; Pain, Arnab; Clark, Taane G; Kelly, John M; (2017) Genome-wide mutagenesis and multi-drug resistance in American trypanosomes induced by the front-line drug benznidazole. Scientific reports, 7 (1). 14407-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-14986-6

Francisco, Amanda F; Jayawardhana, Shiromani; Lewis, Michael D; Taylor, Martin C; Kelly, John M; (2017) Biological factors that impinge on Chagas disease drug development. Parasitology, 144 (14). pp. 1871-1880. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182017001469

Louradour, Isabelle; Monteiro, Carolina Cunha; Inbar, Ehud; Ghosh, Kashinath; Merkhofer, Richard; Lawyer, Phillip; Paun, Andrea; Smelkinson, Margery; Secundino, Nagila; Lewis, Michael; +3 more... Erram, Dinesh; Zurek, Ludek; Sacks, David; (2017) The midgut microbiota plays an essential role in sand fly vector competence for Leishmania major. Cellular microbiology, 19 (10). e12755-e12755. ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12755 Full text not available from this repository.

Cuypers, Bart; Lecordier, Laurence; Meehan, Conor J; Van den Broeck, Frederik; Imamura, Hideo; Büscher, Philippe; Dujardin, Jean-Claude; Laukens, Kris; Schnaufer, Achim; Dewar, Caroline; +12 more... Lewis, Michael; Balmer, Oliver; Azurago, Thomas; Kyei-Faried, Sardick; Ohene, Sally-Ann; Duah, Boateng; Homiah, Prince; Mensah, Ebenezer Kofi; Anleah, Francis; Franco, Jose Ramon; Pays, Etienne; Deborggraeve, Stijn; (2016) Apolipoprotein L1 Variant Associated with Increased Susceptibility to Trypanosome Infection. mBio, 7 (2). e02198-e02115. ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.02198-15

Francisco, Amanda Fortes; Jayawardhana, Shiromani; Lewis, Michael D; White, Karen L; Shackleford, David M; Chen, Gong; Saunders, Jessica; Osuna-Cabello, Maria; Read, Kevin D; Charman, Susan A; +2 more... Chatelain, Eric; Kelly, John M; (2016) Nitroheterocyclic drugs cure experimental Trypanosoma cruzi infections more effectively in the chronic stage than in the acute stage. Scientific reports, 6 (1). 35351-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep35351

Lewis, Michael D; Francisco, Amanda Fortes; Taylor, Martin C; Jayawardhana, Shiromani; Kelly, John M; (2016) Host and parasite genetics shape a link between Trypanosoma cruzi infection dynamics and chronic cardiomyopathy. Cellular microbiology, 18 (10). pp. 1429-1443. ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12584

Lewis, Michael D; Kelly, John M; (2016) Putting Infection Dynamics at the Heart of Chagas Disease. Trends in parasitology, 32 (11). pp. 899-911. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2016.08.009

Shender, Lisa A; Lewis, Michael D; Rejmanek, Daniel; Mazet, Jonna AK; (2016) Molecular Diversity of Trypanosoma cruzi Detected in the Vector Triatoma protracta from California, USA. PLoS neglected tropical diseases, 10 (1). e0004291-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004291

Carnes, Jason; Anupama, Atashi; Balmer, Oliver; Jackson, Andrew; Lewis, Michael; Brown, Rob; Cestari, Igor; Desquesnes, Marc; Gendrin, Claire; Hertz-Fowler, Christiane; +17 more... Imamura, Hideo; Ivens, Alasdair; Kořený, Luděk; Lai, De-Hua; MacLeod, Annette; McDermott, Suzanne M; Merritt, Chris; Monnerat, Severine; Moon, Wonjong; Myler, Peter; Phan, Isabelle; Ramasamy, Gowthaman; Sivam, Dhileep; Lun, Zhao-Rong; Lukeš, Julius; Stuart, Ken; Schnaufer, Achim; (2015) Genome and phylogenetic analyses of Trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty. PLoS neglected tropical diseases, 9 (1). e3404-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003404

Francisco, Amanda Fortes; Lewis, Michael D; Jayawardhana, Shiromani; Taylor, Martin C; Chatelain, Eric; Kelly, John M; (2015) Reply to "Drug Susceptibility of Genetically Engineered Trypanosoma cruzi Strains and Sterile Cure in Animal Models as a Criterion for Potential Clinical Efficacy of Anti-T. cruzi Drugs". Antimicrobial agents and chemotherapy, 59 (12). 7925-. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.02022-15

Francisco, Amanda Fortes; Lewis, Michael D; Jayawardhana, Shiromani; Taylor, Martin C; Chatelain, Eric; Kelly, John M; (2015) Limited Ability of Posaconazole To Cure both Acute and Chronic Trypanosoma cruzi Infections Revealed by Highly Sensitive In Vivo Imaging. Antimicrobial agents and chemotherapy, 59 (8). pp. 4653-4661. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00520-15

Messenger, LA; Yeo, M; Lewis, MD; Llewellyn, MS; Miles, MA; (2015) Molecular Genotyping of Trypanosoma cruzi for Lineage Assignment and Population Genetics. Methods in molecular biology (Clifton, NJ), 1201. pp. 297-337. ISSN 1064-3745 DOI: https://doi.org/10.1007/978-1-4939-1438-8_19 Full text not available from this repository.

Messenger, Louisa A; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; (2015) Molecular genotyping of Trypanosoma cruzi for lineage assignment and population genetics. In: Peacock, C, (ed.) Parasite Genomics Protocols, Second Edition. UNSPECIFIED, pp. 297-337. ISBN 9781493914371 DOI: https://doi.org/10.1007/978-1-4939-1438-8_19 Full text not available from this repository.

Taylor, Martin C; Lewis, Michael D; Fortes Francisco, Amanda; Wilkinson, Shane R; Kelly, John M; (2015) The Trypanosoma cruzi vitamin C dependent peroxidase confers protection against oxidative stress but is not a determinant of virulence. PLoS neglected tropical diseases, 9 (4). e0003707-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003707

Bhattacharyya, Tapan; Falconar, Andrew K; Luquetti, Alejandro O; Costales, Jaime A; Grijalva, Mario J; Lewis, Michael D; Messenger, Louisa A; Tran, Trang T; Ramirez, Juan-David; Guhl, Felipe; +5 more... Carrasco, Hernan J; Diosque, Patricio; Garcia, Lineth; Litvinov, Sergey V; Miles, Michael A; (2014) Development of peptide-based lineage-specific serology for chronic Chagas disease: geographical and clinical distribution of epitope recognition. PLoS neglected tropical diseases, 8 (5). e2892-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0002892

Diosque, Patricio; Tomasini, Nicolás; Lauthier, Juan José; Messenger, Louisa Alexandra; Monje Rumi, María Mercedes; Ragone, Paula Gabriela; Alberti-D'Amato, Anahí Maitén; Pérez Brandán, Cecilia; Barnabé, Christian; Tibayrenc, Michel; +4 more... Lewis, Michael David; Llewellyn, Martin Stephen; Miles, Michael Alexander; Yeo, Matthew; (2014) Optimized multilocus sequence typing (MLST) scheme for Trypanosoma cruzi. PLoS neglected tropical diseases, 8 (8). e3117-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003117

Gelanew, Tesfaye; Hailu, Asrat; Schőnian, Gabriele; Lewis, Michael D; Miles, Michael A; Yeo, Matthew; (2014) Multilocus sequence and microsatellite identification of intra-specific hybrids and ancestor-like donors among natural Ethiopian isolates of Leishmania donovani. International journal for parasitology, 44 (10). pp. 751-757. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2014.05.008

Lewis, Michael D; Fortes Francisco, Amanda; Taylor, Martin C; Burrell-Saward, Hollie; McLatchie, Alex P; Miles, Michael A; Kelly, John M; (2014) Bioluminescence imaging of chronic Trypanosoma cruzi infections reveals tissue-specific parasite dynamics and heart disease in the absence of locally persistent infection. Cellular microbiology, 16 (9). pp. 1285-1300. ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12297

Lewis, Michael D; Francisco, Amanda Fortes; Taylor, Martin C; Kelly, John M; (2014) A new experimental model for assessing drug efficacy against Trypanosoma cruzi infection based on highly sensitive in vivo imaging. Journal of biomolecular screening, 20 (1). pp. 36-43. ISSN 1087-0571 DOI: https://doi.org/10.1177/1087057114552623

McLatchie, Alex P; Burrell-Saward, Hollie; Myburgh, Elmarie; Lewis, Michael D; Ward, Theresa H; Mottram, Jeremy C; Croft, Simon L; Kelly, John M; Taylor, Martin C; (2013) Highly sensitive in vivo imaging of Trypanosoma brucei expressing "red-shifted" luciferase. PLoS neglected tropical diseases, 7 (11). e2571-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0002571

Segovia, Maikell; Carrasco, Hernán J; Martínez, Clara E; Messenger, Louisa A; Nessi, Anaibeth; Londoño, Juan C; Espinosa, Raul; Martínez, Cinda; Alfredo, Mijares; Bonfante-Cabarcas, Rafael; +4 more... Lewis, Michael D; de Noya, Belkisyolé A; Miles, Michael A; Llewellyn, Martin S; (2013) Molecular epidemiologic source tracking of orally transmitted Chagas disease, Venezuela. Emerging infectious diseases, 19 (7). pp. 1098-1101. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid1907.121576

Franzén, Oscar; Talavera-López, Carlos; Ochaya, Stephen; Butler, Claire E; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Marinkelle, Cornelis J; Tyler, Kevin M; Miles, Michael A; +1 more... Andersson, Björn; (2012) Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei. BMC genomics, 13 (1). 531-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-531

Lauthier, Juan J; Tomasini, Nicolás; Barnabé, Christian; Rumi, María M Monje; D'Amato, Anahí M Alberti; Ragone, Paula G; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Basombrío, Miguel A; +3 more... Miles, Michael A; Tibayrenc, Michel; Diosque, Patricio; (2012) Candidate targets for Multilocus Sequence Typing of Trypanosoma cruzi: validation using parasite stocks from the Chaco Region and a set of reference strains. Infection, genetics and evolution, 12 (2). pp. 350-358. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.008 Full text not available from this repository.

Messenger, Louisa A; Llewellyn, Martin S; Bhattacharyya, Tapan; Franzén, Oscar; Lewis, Michael D; Ramírez, Juan David; Carrasco, Hernan J; Andersson, Björn; Miles, Michael A; (2012) Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing. PLoS neglected tropical diseases, 6 (4). e1584-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001584

Ramírez, Juan David; Guhl, Felipe; Messenger, Louisa A; Lewis, Michael D; Montilla, Marleny; Cucunuba, Zulma; Miles, Michael A; Llewellyn, Martin S; (2012) Contemporary cryptic sexuality in Trypanosoma cruzi. Molecular ecology, 21 (17). pp. 4216-4226. ISSN 0962-1083 DOI: https://doi.org/10.1111/j.1365-294X.2012.05699.x

Zumaya-Estrada, Federico A; Messenger, Louisa A; Lopez-Ordonez, Teresa; Lewis, Michael D; Flores-Lopez, Carlos A; Martínez-Ibarra, Alejandro J; Pennington, Pamela M; Cordon-Rosales, Celia; Carrasco, Hernan V; Segovia, Maikel; +2 more... Miles, Michael A; Llewellyn, Martin S; (2012) North American import? Charting the origins of an enigmatic Trypanosoma cruzi domestic genotype. Parasites & vectors, 5 (1). 226-. ISSN 1756-3305 DOI: https://doi.org/10.1186/1756-3305-5-226

Franzén, Oscar; Ochaya, Stephen; Sherwood, Ellen; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; Andersson, Björn; (2011) Shotgun sequencing analysis of Trypanosoma cruzi I Sylvio X10/1 and comparison with T. cruzi VI CL Brener. PLoS neglected tropical diseases, 5 (3). e984-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000984

Hamilton, PB; Lewis, MD; Cruickshank, C; Gaunt, MW; Yeo, M; Llewellyn, MS; Valente, SA; Maia da Silva, F; Stevens, JR; Miles, MA; +1 more... Teixeira, MMG; (2011) Identification and lineage genotyping of South American trypanosomes using fluorescent fragment length barcoding. Infection, genetics and evolution, 11 (1). pp. 44-51. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2010.10.012 Full text not available from this repository.

Lewis, Michael D; Llewellyn, Martin S; Yeo, Matthew; Acosta, Nidia; Gaunt, Michael W; Miles, Michael A; (2011) Recent, independent and anthropogenic origins of Trypanosoma cruzi hybrids. PLoS neglected tropical diseases, 5 (10). e1363-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001363

Llewellyn, Martin S; Rivett-Carnac, John B; Fitzpatrick, Sinead; Lewis, Michael D; Yeo, Matthew; Gaunt, Michael W; Miles, Michael A; (2011) Extraordinary Trypanosoma cruzi diversity within single mammalian reservoir hosts implies a mechanism of diversifying selection. International journal for parasitology, 41 (6). pp. 609-614. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2010.12.004

Sadlova, Jovana; Yeo, Matthew; Seblova, Veronika; Lewis, Michael D; Mauricio, Isabel; Volf, Petr; Miles, Michael A; (2011) Visualisation of Leishmania donovani fluorescent hybrids during early stage development in the sand fly vector. PloS one, 6 (5). e19851-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0019851

Yeo, Matthew; Mauricio, Isabel L; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Acosta, Nidia; Bhattacharyya, Tapan; Diosque, Patricio; Carrasco, Hernan J; Miles, Michael A; (2011) Multilocus sequence typing (MLST) for lineage assignment and high resolution diversity studies in Trypanosoma cruzi. PLoS neglected tropical diseases, 5 (6). e1049-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001049

Bhattacharyya, Tapan; Brooks, Jessica; Yeo, Matthew; Carrasco, Hernan J; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; (2010) Analysis of molecular diversity of the Trypanosoma cruzi trypomastigote small surface antigen reveals novel epitopes, evidence of positive selection and potential implications for lineage-specific serology. International journal for parasitology, 40 (8). pp. 921-928. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2010.01.002 Full text not available from this repository.

Lewis, Michael D; Llewellyn, Martin S; Gaunt, Michael W; Yeo, Matthew; Carrasco, Hernán J; Miles, Michael A; (2009) Flow cytometric analysis and microsatellite genotyping reveal extensive DNA content variation in Trypanosoma cruzi populations and expose contrasts between natural and experimental hybrids. International journal for parasitology, 39 (12). pp. 1305-1317. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2009.04.001

Lewis, Michael D; Ma, Jonathan; Yeo, Matthew; Carrasco, Hernán J; Llewellyn, Martin S; Miles, Michael A; (2009) Genotyping of Trypanosoma cruzi: systematic selection of assays allowing rapid and accurate discrimination of all known lineages. The American journal of tropical medicine and hygiene, 81 (6). pp. 1041-1049. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.2009.09-0305

Llewellyn, Martin S; Lewis, Michael D; Acosta, Nidia; Yeo, Matthew; Carrasco, Hernan J; Segovia, Maikell; Vargas, Jorge; Torrico, Faustino; Miles, Michael A; Gaunt, Michael W; (2009) Trypanosoma cruzi IIc: phylogenetic and phylogeographic insights from sequence and microsatellite analysis and potential impact on emergent Chagas disease. PLoS neglected tropical diseases, 3 (9). e510-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000510

Llewellyn, Martin S; Miles, Michael A; Carrasco, Hernan J; Lewis, Michael D; Yeo, Matthew; Vargas, Jorge; Torrico, Faustino; Diosque, Patricio; Valente, Vera; Valente, Sebastiao A; +1 more... Gaunt, Michael W; (2009) Genome-scale multilocus microsatellite typing of Trypanosoma cruzi discrete typing unit I reveals phylogeographic structure and specific genotypes linked to human infection. PLoS pathogens, 5 (5). e1000410-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1000410

Marcili, Arlei; Lima, Luciana; Valente, Vera C; Valente, Sebastião A; Batista, Jael S; Junqueira, Angela CV; Souza, Alda I; da Rosa, João A; Campaner, Marta; Lewis, Michael D; +3 more... Llewellyn, Martin S; Miles, Michael A; Teixeira, Marta MG; (2009) Comparative phylogeography of Trypanosoma cruzi TCIIc: new hosts, association with terrestrial ecotopes, and spatial clustering. Infection, genetics and evolution, 9 (6). pp. 1265-1274. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2009.07.003 Full text not available from this repository.

Miles, MA; Llewellyn, MS; Lewis, MD; Yeo, M; Baleela, R; Fitzpatrick, S; Gaunt, MW; Mauricio, IL; (2009) The molecular epidemiology and phylogeography of Trypanosoma cruzi and parallel research on Leishmania: looking back and to the future. Parasitology, 136 (12). pp. 1509-1528. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182009990977

Yeo, Matthew; Lewis, Michael D; Carrasco, Hernan J; Acosta, Nidia; Llewellyn, Martin; da Silva Valente, Sebastião Aldo; de Costa Valente, Vera; de Arias, Antonieta Rojas; Miles, Michael A; (2006) Resolution of multiclonal infections of Trypanosoma cruzi from naturally infected triatomine bugs and from experimentally infected mice by direct plating on a sensitive solid medium. International journal for parasitology, 37 (1). pp. 111-120. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2006.08.002 Full text not available from this repository.

Seedhouse, Claire; Bainton, Rowena; Lewis, Michael; Harding, Alexander; Russell, Nigel; Das-Gupta, Emma; (2002) The genotype distribution of the XRCC1 gene indicates a role for base excision repair in the development of therapy-related acute myeloblastic leukemia. Blood, 100 (10). pp. 3761-3766. ISSN 0006-4971 DOI: https://doi.org/10.1182/blood-2002-04-1152 Full text not available from this repository.