Harris, John P; Iturriza-Gomara, Miren; Allen, David J; Kelly, Susan; O'Brien, Sarah J; (2019) Norovirus strain types found within the second infectious intestinal diseases (IID2) study an analysis of norovirus circulating in the community. BMC infectious diseases, 19 (1). p. 87. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-019-3706-z

Hungerford, Daniel; Allen, David J; Nawaz, Sameena; Collins, Sarah; Ladhani, Shamez; Vivancos, Roberto; Iturriza-Gómara, Miren; (2019) Impact of rotavirus vaccination on rotavirus genotype distribution and diversity in England, September 2006 to August 2016. Eurosurveillance, 24 (6). ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.es.2019.24.6.1700774

Morgan, Mari; Watts, Vicky; Allen, David; Curtis, Daniele; Kirolos, Amir; Macdonald, Neil; Maslen, Ellie; Morgan, Deb; Saei, Ayoub; Sedgwick, James; +6 more... Stevenson, Janet; Turbitt, Deborah; Vivancos, Roberto; Waugh, Catriona; Williams, Chris; Decraene, Valerie; (2019) Challenges of investigating a large food-borne norovirus outbreak across all branches of a restaurant group in the United Kingdom, October 2016. Eurosurveillance, 24 (18). ISSN 1560-7917 DOI: https://doi.org/10.2807/1560-7917.es.2019.24.18.1800511

Smith, Catherine M; Allen, David J; Nawaz, Sameena; Kozlakidis, Zisis; Nastouli, Eleni; Hayward, Andrew; Ward, Katherine N; (2019) An interactive data visualisation application to investigate nosocomial transmission of infections. Wellcome Open Research, 4. p. 100. DOI: https://doi.org/10.12688/wellcomeopenres.15240.1

Walker, Jemma L; Andrews, Nick J; Atchison, Christina J; Collins, Sarah; Allen, David J; Ramsay, Mary E; Ladhani, Shamez N; Thomas, Sara L; (2019) Effectiveness of oral rotavirus vaccination in England against rotavirus-confirmed and all-cause acute gastroenteritis. Vaccine: X, 1. p. 100005. ISSN 2590-1362 DOI: https://doi.org/10.1016/j.jvacx.2019.100005

Black, S; Bradley, C; Lai, FY; Shenoy, S; Bandi, S; Allen, DJ; Tang, JW; (2018) Comparing the Clinical Severity of Disease Caused by Enteroviruses and Human Parechoviruses in Neonates and Infants. The Pediatric infectious disease journal. ISSN 0891-3668 DOI: https://doi.org/10.1097/INF.0000000000002145

Ferreras Antolín, L; Kadambari, S; Braccio, S; Tang, JW; Xerry, J; Allen, DJ; Ladhani, SN; Parechovirus Surveillance Network; , COLLABORATORS; Agrawal, S; +24 more... Keene, E; Riordan, A; Vergnano, S; Mcleod, R; Martinez-Alier, N; Carr, J; Sudhanva, M; Broughton, S; Watson, G; Bandi, S; Sausi, FE; Kelly, D; Roy, RB; Kumar, Y; Warren, C; Vincent, L; Chakrabarti, P; Thompson, S; Gillespie, M; Hinds, L; Jones, CE; Riley, P; Habibollah, S; Owens, S; (2018) Increased detection of human parechovirus infection in infants in England during 2016: epidemiology and clinical characteristics. Archives of disease in childhood. ISSN 0003-9888 DOI: https://doi.org/10.1136/archdischild-2017-314281 Full text not available from this repository.

Harvala, H; Broberg, E; Benschop, K; Berginc, N; Ladhani, S; Susi, P; Christiansen, C; McKenna, J; Allen, D; Makiello, P; +56 more... McAllister, G; Carmen, M; Zakikhany, K; Dyrdak, R; Nielsen, X; Madsen, T; Paul, J; Moore, C; von Eije, K; Piralla, A; Carlier, M; Vanoverschelde, L; Poelman, R; Anton, A; López-Labrador, FX; Pellegrinelli, L; Keeren, K; Maier, M; Cassidy, H; Derdas, S; Savolainen-Kopra, C; Diedrich, S; Nordbø, S; Buesa, J; Bailly, JL; Baldanti, F; MacAdam, A; Mirand, A; Dudman, S; Schuffenecker, I; Kadambari, S; Neyts, J; Griffiths, MJ; Richter, J; Margaretto, C; Govind, S; Morley, U; Adams, O; Krokstad, S; Dean, J; Pons-Salort, M; Prochazka, B; Cabrerizo, M; Majumdar, M; Nebbia, G; Wiewel, M; Cottrell, S; Coyle, P; Martin, J; Moore, C; Midgley, S; Horby, P; Wolthers, K; Simmonds, P; Niesters, H; Fischer, TK; (2018) Recommendations for enterovirus diagnostics and characterisation within and beyond Europe. Journal of clinical virology, 101. pp. 11-17. ISSN 1386-6532 DOI: https://doi.org/10.1016/j.jcv.2018.01.008

Kadambari, Seilesh; Braccio, Serena; Ribeiro, Sonia; Allen, David J; Pebody, Richard; Brown, David; Cunney, Robert; Sharland, Mike; Ladhani, Shamez; (2018) Enterovirus and parechovirus meningitis in infants younger than 90 days old in the UK and Republic of Ireland: a British Paediatric Surveillance Unit study. Archives of Disease in Childhood. ISSN 0003-9888 DOI: https://doi.org/10.1136/archdischild-2018-315643

Majumdar, Manasi; Klapsa, Dimitra; Wilton, Thomas; Akello, Joyce; Anscombe, Catherine; Allen, David; Mee, Edward T; Minor, Philip D; Martin, Javier; (2018) Isolation of Vaccine-Like Poliovirus Strains in Sewage Samples From the United Kingdom. The Journal of Infectious Diseases, 217 (8). pp. 1222-1230. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jix667

Praharaj, I; Parker, EPK; Giri, S; Allen, DJ; Silas, S; Revathi, R; Kaliappan, SP; John, J; Prasad, JH; Kampmann, B; +3 more... Iturriza-Gómara, M; Grassly, NC; Kang, G; (2018) Influence of non-polio enteroviruses and the bacterial gut microbiota on oral poliovirus vaccine response: a study from south India. The Journal of infectious diseases. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiy568 Full text not available from this repository.

Sandmann, FG; Shallcross, L; Adams, N; Allen, DJ; Coen, PG; Jeanes, A; Kozlakidis, Z; Larkin, L; Wurie, F; Robotham, JV; +2 more... Jit, M; Deeny, SR; (2018) Estimating the Hospital Burden of Norovirus-Associated Gastroenteritis in England and its Opportunity Costs for Non-Admitted Patients. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy167

Teo, KW; Lai, FY; Bandi, S; Allen, DJ; Tang, JW; (2018) Emergence of Coxsackie A6 hand-foot-and-mouth disease and comparative severity of Coxsackie B vs. echovirus infections, 2014-2016, UK. Elsevier. DOI: https://doi.org/10.1016/j.jinf.2018.08.007 Full text not available from this repository.

van Beek, J; de Graaf, M; Al-Hello, H; Allen, DJ; Ambert-Balay, K; Botteldoorn, N; Brytting, M; Buesa, J; Cabrerizo, M; Chan, M; +23 more... Cloak, F; Di Bartolo, I; Guix, S; Hewitt, J; Iritani, N; Jin, M; Johne, R; Lederer, I; Mans, J; Martella, V; Maunula, L; McAllister, G; Niendorf, S; Niesters, HG; Podkolzin, AT; Poljsak-Prijatelj, M; Rasmussen, LD; Reuter, G; Tuite, G; Kroneman, A; Vennema, H; Koopmans, MPG; NoroNet; (2018) Molecular surveillance of norovirus, 2005-16: an epidemiological analysis of data collected from the NoroNet network. The Lancet infectious diseases, 18 (5). pp. 545-553. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(18)30059-8

Allen, DJ; Harris, JP; (2017) Methods for ascertaining norovirus disease burdens. Human vaccines & immunotherapeutics. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2017.1360455

Allen, David J; Harris, John P; (2017) Methods for ascertaining norovirus disease burdens. HUMAN VACCINES & IMMUNOTHERAPEUTICS, 13 (11). pp. 2630-2636. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2017.1360455

Burchett, HE; Leurent, B; Baiden, F; Baltzell, K; Björkman, A; Bruxvoort, K; Clarke, S; DiLiberto, D; Elfving, K; Goodman, C; +15 more... Hopkins, H; Lal, S; Liverani, M; Magnussen, P; Mårtensson, A; Mbacham, W; Mbonye, A; Onwujekwe, O; Roth Allen, D; Shakely, D; Staedke, S; Vestergaard, LS; Whitty, CJ; Wiseman, V; Chandler, CI; (2017) Improving prescribing practices with rapid diagnostic tests (RDTs): synthesis of 10 studies to explore reasons for variation in malaria RDT uptake and adherence. BMJ open, 7 (3). e012973. ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2016-012973

Carrion Martin, AI; Pebody, RG; Danis, K; Ellis, J; Niazi, S; DE Lusignan, S; Brown, KE; Zambon, M; Allen, DJ; (2017) The emergence of enterovirus D68 in England in autumn 2014 and the necessity for reinforcing enterovirus respiratory screening. Epidemiology and infection. pp. 1-10. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268817000590

Holmes, CW; Rahman, S; Allen, DJ; Bandi, S; Tang, JW; (2017) Human parechovirus cluster in the UK, 8 May-2 August 2016-sequence analysis. Journal of clinical virology, 93. pp. 37-39. ISSN 1386-6532 DOI: https://doi.org/10.1016/j.jcv.2017.05.018

Inns, T; Pulawska-Czub, A; Harris, JP; Vivancos, R; Read, JM; Beeching, NJ; Allen, DJ; Iturriza-Gomara, M; O'Brien, SJ; (2017) Prospective cohort study to investigate the burden and transmission of acute gastroenteritis in care homes: a study protocol. BMJ open, 7 (11). e018867. ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2017-018867

Ruis, C; Roy, S; Brown, JR; Allen, DJ; Goldstein, RA; Breuer, J; (2017) The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission. PloS one, 12 (6). e0179572. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0179572

Smith, KC; Inns, T; Decraene, V; Fox, A; Allen, DJ; Shah, A; (2017) An outbreak of norovirus GI-6 infection following a wedding in North West England. Epidemiology and infection, 145 (6). pp. 1239-1245. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268816003368

Allen, DJ; Trainor, E; Callaghan, A; O'Brien, SJ; Cunliffe, NA; Iturriza-Gómara, M; (2016) Early Detection of Epidemic GII-4 Norovirus Strains in UK and Malawi: Role of Surveillance of Sporadic Acute Gastroenteritis in Anticipating Global Epidemics. PloS one, 11 (4). e0146972. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0146972

Carmona-Vicente, N; Allen, DJ; Rodríguez-Díaz, J; Iturriza-Gómara, M; Buesa, J; (2016) Antibodies against Lewis antigens inhibit the binding of human norovirus GII.4 virus-like particles to saliva but not to intestinal Caco-2 cells. Virology journal, 13. p. 82. ISSN 1743-422X DOI: https://doi.org/10.1186/s12985-016-0538-y

Carmona-Vicente, N; Vila-Vicent, S; Allen, D; Gozalbo-Rovira, R; Iturriza-Gómara, M; Buesa, J; Rodríguez-Díaz, J; (2016) Characterization of a Novel Conformational GII.4 Norovirus Epitope: Implications for Norovirus-Host Interactions. Journal of virology, 90 (17). pp. 7703-14. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.01023-16 Full text not available from this repository.

Holmes, CW; Koo, SS; Osman, H; Wilson, S; Xerry, J; Gallimore, CI; Allen, DJ; Tang, JW; (2016) Predominance of enterovirus B and echovirus 30 as cause of viral meningitis in a UK population. Journal of clinical virology, 81. pp. 90-3. ISSN 1386-6532 DOI: https://doi.org/10.1016/j.jcv.2016.06.007

Atchison, CJ; Stowe, J; Andrews, N; Collins, S; Allen, DJ; Nawaz, S; Brown, D; Ramsay, ME; Ladhani, SN; (2015) Rapid Declines in Age Group-Specific Rotavirus Infection and Acute Gastroenteritis Among Vaccinated and Unvaccinated Individuals Within 1 Year of Rotavirus Vaccine Introduction in England and Wales. The Journal of infectious diseases, 213 (2). pp. 243-9. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiv398 Full text not available from this repository.

Hungerford, D; Read, JM; Cooke, RP; Vivancos, R; Iturriza-Gómara, M; Allen, DJ; French, N; Cunliffe, N; (2015) Early impact of rotavirus vaccination in a large paediatric hospital in the UK. Technical Report. Elsevier. DOI: https://doi.org/10.1016/j.jhin.2015.12.010

Allen, DJ; Adams, NL; Aladin, F; Harris, JP; Brown, DW; (2014) Emergence of the GII-4 Norovirus Sydney2012 strain in England, winter 2012-2013. PloS one, 9 (2). e88978. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0088978

Harris, JP; Adams, NL; Lopman, BA; Allen, DJ; Adak, GK; (2013) The development of Web-based surveillance provides new insights into the burden of norovirus outbreaks in hospitals in England. Epidemiology and infection, 142 (8). pp. 1590-8. ISSN 0950-2688 DOI: https://doi.org/10.1017/S0950268813002896 Full text not available from this repository.

Nawaz, S; Allen, DJ; Aladin, F; Gallimore, C; Iturriza-Gómara, M; (2012) Human bocaviruses are not significantly associated with gastroenteritis: results of retesting archive DNA from a case control study in the UK. PloS one, 7 (7). e41346. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0041346

Wight, DJ; Boucherit, VC; Nader, M; Allen, DJ; Taylor, IA; Bishop, KN; (2012) The gammaretroviral p12 protein has multiple domains that function during the early stages of replication. Retrovirology, 9. p. 83. ISSN 1742-4690 DOI: https://doi.org/10.1186/1742-4690-9-83

Zakikhany, K; Allen, DJ; Brown, D; Iturriza-Gómara, M; (2012) Molecular evolution of GII-4 Norovirus strains. PloS one, 7 (7). e41625. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0041625

Morter, S; Bennet, G; Fish, J; Richards, J; Allen, DJ; Nawaz, S; Iturriza-Gómara, M; Brolly, S; Gray, J; (2010) Norovirus in the hospital setting: virus introduction and spread within the hospital environment. The Journal of hospital infection, 77 (2). pp. 106-12. ISSN 0195-6701 DOI: https://doi.org/10.1016/j.jhin.2010.09.035 Full text not available from this repository.

Allen, DJ; Gray, JJ; Gallimore, CI; Xerry, J; Iturriza-Gómara, M; (2008) Analysis of amino acid variation in the P2 domain of the GII-4 norovirus VP1 protein reveals putative variant-specific epitopes. PloS one, 3 (1). e1485. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0001485

Xerry, J; Gallimore, CI; Iturriza-Gómara, M; Allen, DJ; Gray, JJ; (2008) Transmission events within outbreaks of gastroenteritis determined through analysis of nucleotide sequences of the P2 domain of genogroup II noroviruses. Journal of clinical microbiology, 46 (3). pp. 947-53. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.02240-07 Full text not available from this repository.