Items where Faculty or Department is "Faculty of Infectious and Tropical Diseases > Dept of Pathogen Molecular Biology"

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Number of items: 99.

A

Amambua-Ngwa, A; Jeffries, D; Amato, R; Worwui, A; Karim, M; Ceesay, S; Nyang, H; Nwakanma, D; Okebe, J; Kwiatkowski, D; +2 more... (2018) Consistent signatures of selection from genomic analysis of pairs of temporal and spatial Plasmodium falciparum populations from The Gambia. Scientific reports, 8 (1). p. 9687. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-28017-5
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Auburn, S; Benavente, ED; Miotto, O; Pearson, RD; Amato, R; Grigg, MJ; Barber, BE; William, T; Handayuni, I; Marfurt, J; +9 more... (2018) Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics. Nature communications, 9 (1). p. 2585. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-018-04965-4
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B

Baddam, R; Kumar, N; Wieler, LH; Lankapalli, AK; Ahmed, N; Peacock, SJ; Semmler, T; (2018) Author Correction: Analysis of mutations in pncA reveals non-overlapping patterns among various lineages of Mycobacterium tuberculosis. Nature Publishing Group.
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Baker, KS; Dallman, TJ; Field, N; Childs, T; Mitchell, H; Day, M; Weill, FX; Lefèvre, S; Tourdjman, M; Hughes, G; +2 more... (2018) Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance. Scientific reports, 8 (1). p. 7389. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-25764-3
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Baker, KS; Dallman, TJ; Field, N; Childs, T; Mitchell, H; Day, M; Weill, FX; Lefèvre, S; Tourdjman, M; Hughes, G; +2 more... (2018) Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species. Nature communications, 9 (1). p. 1462. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-018-03949-8
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Baker, S; Thomson, N; Weill, FX; Holt, KE; (2018) Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens. Science (New York, NY), 360 (6390). pp. 733-738. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.aar3777 Full text not available from this repository.

Bhattacharyya, T; Messenger, LA; Bern, C; Mertens, P; Gilleman, Q; Zeippen, N; Bremer Hinckel, BC; Murphy, N; Gilman, RH; Miles, MA; +1 more... (2018) Severity of Chagasic Cardiomyopathy Is Associated With Response To A Novel Rapid Diagnostic Test For Trypanosoma cruzi TcII/V/VI. Clinical infectious diseases. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy121 Full text not available from this repository.

Bossé, JT; LI, Y; Sárközi, R; Fodor, L; Lacouture, S; Gottschalk, M; Amoribieta, MC; Angen, Ø, ; Nedbalcova, K; Holden, MT; +1 more... (2018) Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis. Veterinary microbiology. ISSN 0378-1135 DOI: https://doi.org/10.1016/j.vetmic.2018.02.019
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Bossé, JT; Li, Y; Fernandez Crespo, R; Lacouture, S; Gottschalk, M; Sárközi, R; Fodor, L; Casas Amoribieta, M; Angen, Ø, ; Nedbalcova, K; +7 more... (2018) Comparative sequence analysis of the capsular polysaccharide loci of Actinobacillus pleuropneumoniae serovars 1-18, and development of two multiplex PCRs for comprehensive capsule typing. Veterinary microbiology, 220. pp. 83-89. ISSN 0378-1135 DOI: https://doi.org/10.1016/j.vetmic.2018.05.011
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Bossé, JT; Li, Y; Sárközi, R; Fodor, L; Lacouture, S; Gottschalk, M; Casas Amoribieta, M; Angen, Ø, ; Nedbalcova, K; Holden, MTG; +6 more... (2018) Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis. Veterinary microbiology, 217. pp. 1-6. ISSN 0378-1135 DOI: https://doi.org/10.1016/j.vetmic.2018.02.019
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C

Cain, AK; Boinett, CJ; Barquist, L; Dordel, J; Fookes, M; Mayho, M; Ellington, MJ; Goulding, D; Pickard, D; Wick, RR; +3 more... (2018) Morphological, genomic and transcriptomic responses of Klebsiella pneumoniae to the last-line antibiotic colistin. Scientific reports, 8 (1). p. 9868. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-28199-y
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Claessens, A; Harris, LM; Stanojcic, S; Chappell, L; Stanton, A; Kuk, N; Veneziano-Broccia, P; Sterkers, Y; Rayner, JC; Merrick, CJ; (2018) RecQ helicases in the malaria parasite Plasmodium falciparum affect genome stability, gene expression patterns and DNA replication dynamics. PLoS genetics, 14 (7). e1007490. ISSN 1553-7390 DOI: https://doi.org/10.1371/journal.pgen.1007490
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Coll, F; Phelan, J; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ali, S; Abdallah, AM; Alghamdi, S; Alsomali, M; Ahmed, AO; +41 more... (2018) Author Correction: Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis. Nature genetics. ISSN 1061-4036 DOI: https://doi.org/10.1038/s41588-018-0074-3 Full text not available from this repository.

Corbin, LJ; Tan, VY; Hughes, DA; Wade, KH; Paul, DS; Tansey, KE; Butcher, F; Dudbridge, F; Howson, JM; Jallow, MW; +21 more... (2018) Formalising recall by genotype as an efficient approach to detailed phenotyping and causal inference. Nature communications, 9 (1). p. 711. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-018-03109-y
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D

Davies, C; Taylor, A; Gundogdu, O; Wren, WB; Elmi, A; Dorrell, N; (2018) Investigating the biogenesis of Campylobacter jejuni outer membrane vesicle production. [Conference or Workshop Item] Full text not available from this repository.

Domman, D; Chowdhury, F; Khan, AI; Dorman, MJ; Mutreja, A; Uddin, MI; Paul, A; Begum, YA; Charles, RC; Calderwood, SB; +6 more... (2018) Defining endemic cholera at three levels of spatiotemporal resolution within Bangladesh. Nature genetics. ISSN 1061-4036 DOI: https://doi.org/10.1038/s41588-018-0150-8 Full text not available from this repository.

de Goffau, MC; Lager, S; Salter, SJ; Wagner, J; Kronbichler, A; Charnock-Jones, DS; Peacock, SJ; Smith, GCS; Parkhill, J; (2018) Recognizing the reagent microbiome. Nature microbiology, 3 (8). pp. 851-853. ISSN 2058-5276 DOI: https://doi.org/10.1038/s41564-018-0202-y Full text not available from this repository.

E

Elsheikha, HM; Regan, CS; Clark, CG; (2018) Novel Entamoeba Findings in Nonhuman Primates. Trends in parasitology, 34. pp. 283-294. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2017.12.008 Item availability may be restricted.
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F

Ferreras Antolín, L; Kadambari, S; Braccio, S; Tang, JW; Xerry, J; Allen, DJ; Ladhani, SN; Parechovirus Surveillance Network, ; , COLLABORATORS; Agrawal, S; +24 more... (2018) Increased detection of human parechovirus infection in infants in England during 2016: epidemiology and clinical characteristics. Archives of disease in childhood. ISSN 0003-9888 DOI: https://doi.org/10.1136/archdischild-2017-314281 Full text not available from this repository.

Fukuda, K; Limmathurotsakul, D; Okeke, IN; Shetty, N; van Doorn, R; Feasey, NA; Chiara, F; Zoubiane, G; Jinks, T; Parkhill, J; +5 more... (2018) Surveillance and Epidemiology of Drug Resistant Infections Consortium (SEDRIC): Supporting the transition from strategy to action. Wellcome open research, 3. p. 59. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.14586.1
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G

Gatherer, D; Benko, M; Brandt, C; Bryant, N; Dastjerdi, A; Depledge, D; Doszpoly, A; Gompels, U; Hartley, C; Inoue, N; +14 more... (2018) 18 new species in the family Herpesviridae. Working Paper. UNSPECIFIED. Full text not available from this repository.

Ghashghaei, O; Kielland, N; Revés, M; Taylor, MC; Kelly, JM; Di Pietro, O; Muñoz-Torrero, D; Pérez, B; Lavilla, R; (2018) Tetrasubstituted Imidazolium Salts as Potent Antiparasitic Agents against African and American Trypanosomiases. Molecules (Basel, Switzerland), 23 (1). ISSN 1420-3049 DOI: https://doi.org/10.3390/molecules23010177
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Gompels, U; (2018) Innovation through Collaboration. Technical Report. The Royal Society. Full text not available from this repository.

Gompels, U; (2018) World Health Organisation Consultation on regulatory expectations for evaluation of nucleic acid vaccines. Technical Report. World Health Organisation. Full text not available from this repository.

Gouliouris, T; Warne, B; Cartwright, EJP; Bedford, L; Weerasuriya, CK; Raven, KE; Brown, NM; Török, ME; Limmathurotsakul, D; Peacock, SJ; (2018) Duration of exposure to multiple antibiotics is associated with increased risk of VRE bacteraemia: a nested case-control study. The Journal of antimicrobial chemotherapy. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dky075
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Gundogdu, O; Teixeira da Silva, D; Mohammad, B; Elmi, A; Wren, WB; van Vliet, A; Dorrell, N; (2018) The Campylobacter jejuni oxidative stress regulator RrpB is associated with a genomic hypervariable region and altered oxidative stress resistance. [Conference or Workshop Item] Full text not available from this repository.

H

Harvala, H; Broberg, E; Benschop, K; Berginc, N; Ladhani, S; Susi, P; Christiansen, C; McKenna, J; Allen, D; Makiello, P; +56 more... (2018) Recommendations for enterovirus diagnostics and characterisation within and beyond Europe. Journal of clinical virology, 101. pp. 11-17. ISSN 1386-6532 DOI: https://doi.org/10.1016/j.jcv.2018.01.008
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Husna, AU; Wang, N; Cobbold, SA; Newton, HJ; Hocking, DM; Wilksch, JJ; Scott, TA; Davies, MR; Hinton, JC; Tree, JJ; +3 more... (2018) Methionine biosynthesis and transport are functionally redundant for the growth and virulence of Salmonella Typhimurium. The Journal of biological chemistry. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.RA118.002592 Item availability may be restricted.
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I

J

Jervis, AJ; Wood, AG; Cain, JA; Butler, JA; Frost, H; Lord, E; Langdon, R; Cordwell, SJ; Wren, BW; Linton, D; (2018) Functional analysis of the Helicobacter pullorum N-linked protein glycosylation system. Glycobiology. ISSN 0959-6658 DOI: https://doi.org/10.1093/glycob/cwx110
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K

Kiyuka, PK; Agoti, CN; Munywoki, PK; Njeru, R; Bett, A; Otieno, JR; Otieno, GP; Kamau, E; Clark, TG; van der Hoek, L; +3 more... (2018) Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya. The Journal of infectious diseases, 217 (11). pp. 1728-1739. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiy098
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Köser, CU; Heyckendorf, J; Andres, S; Olaru, ID; Schön, T; Sturegård, E; Beckert, P; Schleusener, V; Kohl, TA; Hillemann, D; +6 more... (2018) Reply to Dookie et al., "Whole-Genome Sequencing To Guide the Selection of Treatment for Drug-Resistant Tuberculosis". Antimicrobial agents and chemotherapy, 62 (8). ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00616-18 Full text not available from this repository.

L

Lee, HJ; Georgiadou, A; Walther, M; Nwakanma, D; Stewart, LB; Levin, M; Otto, TD; Conway, DJ; Coin, LJ; Cunnington, AJ; (2018) Integrated pathogen load and dual transcriptome analysis of systemic host-pathogen interactions in severe malaria. Science translational medicine, 10 (447). ISSN 1946-6234 DOI: https://doi.org/10.1126/scitranslmed.aar3619 Full text not available from this repository.

Lewis, MD; Francisco, AF; Jayawardhana, S; Langston, H; Taylor, MC; Kelly, JM; (2018) Imaging the development of chronic Chagas disease after oral transmission. Scientific reports, 8 (1). p. 11292. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-29564-7 Full text not available from this repository.

Liaw, J; Hong, G; Hachani, A; Wren, WB; Gundogdu, O; Dorrell, N; (2018) Investigation of the role of Campylobacter jejuni Type VI secretion system during interactions with host cells. [Conference or Workshop Item] Full text not available from this repository.

M

M C Lam, M; Wyres, KL; Duchêne, S; Wick, RR; Judd, LM; Gan, YH; Hoh, CH; Archuleta, S; Molton, JS; Kalimuddin, S; +4 more... (2018) Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination. Nature communications, 9 (1). p. 2703. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-018-05114-7 Full text not available from this repository.

MacLean, LM; Thomas, J; Lewis, MD; Cotillo, I; Gray, DW; De Rycker, M; (2018) Development of Trypanosoma cruzi in vitro assays to identify compounds suitable for progression in Chagas' disease drug discovery. PLoS neglected tropical diseases, 12 (7). e0006612. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0006612 Full text not available from this repository.

Meerstein-Kessel, L; van der Lee, R; Stone, W; Lanke, K; Baker, DA; Alano, P; Silvestrini, F; Janse, CJ; Khan, SM; van de Vegte-Bolmer, M; +10 more... (2018) Probabilistic data integration identifies reliable gametocyte-specific proteins and transcripts in malaria parasites. Sci Rep, 8 (1). p. 410. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-18840-7
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Molton, JS; Low, I; Choy, MMJ; Aw, PPK; Hibberd, ML; Tambyah, PA; Wilder-Smith, A; (2018) Dengue virus not detected in human semen. Journal of travel medicine, 25 (1). ISSN 1195-1982 DOI: https://doi.org/10.1093/jtm/tay023 Full text not available from this repository.

Moore, S; Dongdem, AZ; Opare, D; Cottavoz, P; Fookes, M; Sadji, AY; Dzotsi, E; Dogbe, M; Jeddi, F; Bidjada, B; +12 more... (2018) Dynamics of cholera epidemics from Benin to Mauritania. PLoS neglected tropical diseases, 12 (4). e0006379. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0006379
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Ndila, CM; Uyoga, S; Macharia, AW; Nyutu, G; Peshu, N; Ojal, J; Shebe, M; Awuondo, KO; Mturi, N; Tsofa, B; +289 more... (2018) Human candidate gene polymorphisms and risk of severe malaria in children in Kilifi, Kenya: a case-control association study. The Lancet Haematology. ISSN 2352-3026 DOI: https://doi.org/10.1016/S2352-3026(18)30107-8 Full text not available from this repository.

O

Ojal, JO; (2018) Long-term population effects of pneumococcal vaccines on carriage of pneumococcal serotypes and subsequent disease in Kenya. PhD (research paper style) thesis, London School of Hygiene & Tropical Medicine.
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P

Palittapongarnpim, P; Ajawatanawong, P; Viratyosin, W; Smittipat, N; Disratthakit, A; Mahasirimongkol, S; Yanai, H; Yamada, N; Nedsuwan, S; Imasanguan, W; +13 more... (2018) Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates. Scientific reports, 8 (1). p. 11597. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-018-29986-3
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Perdigão, J; Silva, C; Diniz, J; Pereira, C; Machado, D; Ramos, J; Silva, H; Abilleira, F; Brum, C; Reis, AJ; +28 more... (2018) Clonal expansion across the seas as seen through CPLP-TB database: A joint effort in cataloguing Mycobacterium tuberculosis genetic diversity in Portuguese-speaking countries. Infection, genetics and evolution. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2018.03.011 Item availability may be restricted.
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Pettersson, JH; Bohlin, J; Dupont-Rouzeyrol, M; Brynildsrud, OB; Alfsnes, K; Cao-Lormeau, VM; Gaunt, MW; Falconar, AK; de Lamballerie, X; Eldholm, V; +2 more... (2018) Re-visiting the evolution, dispersal and epidemiology of Zika virus in Asia. Emerging microbes & infections, 7 (1). p. 79. ISSN 2222-1751 DOI: https://doi.org/10.1038/s41426-018-0082-5
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Pettersson, JH; Eldholm, V; Seligman, SJ; Lundkvist, Å, ; Falconar, AK; Gaunt, MW; Musso, D; Nougairède, A; Charrel, R; Gould, EA; +1 more... (2018) Erratum for Pettersson et al., "How Did Zika Virus Emerge in the Pacific Islands and Latin America?". mBio, 9 (2). ISSN 2150-7511 DOI: https://doi.org/10.1128/mBio.00386-18
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Phelan, J; de Sessions, PF; Tientcheu, L; Perdigao, J; Machado, D; Hasan, R; Hasan, Z; Bergval, IL; Anthony, R; McNerney, R; +6 more... (2018) Methylation in Mycobacterium tuberculosis is lineage specific with associated mutations present globally. Sci Rep, 8 (1). p. 160. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-017-18188-y
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Richardson, EJ; Bacigalupe, R; Harrison, EM; Weinert, LA; Lycett, S; Vrieling, M; Robb, K; Hoskisson, PA; Holden, MTG; Feil, EJ; +10 more... (2018) Gene exchange drives the ecological success of a multi-host bacterial pathogen. Nature ecology & evolution. ISSN 2397-334X DOI: https://doi.org/10.1038/s41559-018-0617-0 Full text not available from this repository.

S

Sallah, N; Palser, AL; Watson, SJ; Labo, N; Asiki, G; Marshall, V; Newton, R; Whitby, D; Kellam, P; Barroso, I; (2018) Genome-wide sequence analysis of Kaposi's Sarcoma-associated Herpesvirus shows diversification driven by recombination. The Journal of infectious diseases. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiy427 Full text not available from this repository.

Skilton, RJ; Wang, Y; O'Neill, C; Filardo, S; Marsh, P; Bénard, A; Thomson, NR; Ramsey, KH; Clarke, IN; (2018) The Chlamydia muridarum plasmid revisited : new insights into growth kinetics. Wellcome open research, 3. p. 25. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.13905.1
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T

Ta, LDH; Yap, GC; Tay, CJX; Lim, ASM; Huang, CH; Chu, CW; De Sessions, PF; Shek, LP; Goh, A; Van Bever, HPS; +14 more... (2018) Establishment of the nasal microbiota in the first 18 months of life: Correlation with early-onset rhinitis and wheezing. The Journal of allergy and clinical immunology. ISSN 0091-6749 DOI: https://doi.org/10.1016/j.jaci.2018.01.032 Full text not available from this repository.

Thomas, JA; Tan, MYS; Bisson, C; Borg, A; Umrekar, TR; Hackett, F; Hale, VL; Vizcay-Barrena, G; Fleck, RA; Snijders, AP; +2 more... (2018) A protease cascade regulates release of the human malaria parasite Plasmodium falciparum from host red blood cells. Nature microbiology. ISSN 2058-5276 DOI: https://doi.org/10.1038/s41564-018-0111-0 Item availability may be restricted.
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U

V

Van Nguyen, D; Van Nguyen, C; Bonsall, D; Ngo, TT; Carrique-Mas, J; Pham, AH; Bryant, JE; Thwaites, G; Baker, S; Woolhouse, M; +1 more... (2018) Detection and Characterization of Homologues of Human Hepatitis Viruses and Pegiviruses in Rodents and Bats in Vietnam. Viruses, 10 (3). ISSN 1999-4915 DOI: https://doi.org/10.3390/v10030102
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van Beek, J; de Graaf, M; Al-Hello, H; Allen, DJ; Ambert-Balay, K; Botteldoorn, N; Brytting, M; Buesa, J; Cabrerizo, M; Chan, M; +23 more... (2018) Molecular surveillance of norovirus, 2005-16: an epidemiological analysis of data collected from the NoroNet network. The Lancet infectious diseases, 18 (5). pp. 545-553. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(18)30059-8 Full text not available from this repository.

W

Wiersinga, WJ; Virk, HS; Torres, AG; Currie, BJ; Peacock, SJ; Dance, DAB; Limmathurotsakul, D; (2018) Melioidosis. Nature reviews Disease primers, 4. p. 17107. ISSN 2056-676X DOI: https://doi.org/10.1038/nrdp.2017.107 Full text not available from this repository.

Wu, L; Shi, W; Long, J; Guo, X; Michailidou, K; Beesley, J; Bolla, MK; Shu, XO; Lu, Y; Cai, Q; +202 more... (2018) A transcriptome-wide association study of 229,000 women identifies new candidate susceptibility genes for breast cancer. Nature genetics. ISSN 1061-4036 DOI: https://doi.org/10.1038/s41588-018-0132-x Full text not available from this repository.

X

This list was generated on Mon Aug 13 02:48:42 2018 BST.