Items where Faculty or Department is "Faculty of Infectious and Tropical Diseases > Department of Infection Biology > Dept of Pathogen Molecular Biology (-2019)"

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Number of items: 102.

Article

Ale, Angelique; Crepin, Valerie F; Collins, James W; Constantinou, Nicholas; Habibzay, Maryam; Babtie, Ann C; Frankel, Gad; Stumpf, Michael PH; (2016) Model of Host-Pathogen Interaction Dynamics Links In Vivo Optical Imaging and Immune Responses. Infection and immunity, 85 (1). e00606-e00616. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00606-16
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Arjyal, Amit; Basnyat, Buddha; Nhan, Ho Thi; Koirala, Samir; Giri, Abhishek; Joshi, Niva; Shakya, Mila; Pathak, Kamal Raj; Mahat, Saruna Pathak; Prajapati, Shanti Pradhan; +18 more... Adhikari, Nabin; Thapa, Rajkumar; Merson, Laura; Gajurel, Damodar; Lamsal, Kamal; Lamsal, Dinesh; Yadav, Bharat Kumar; Shah, Ganesh; Shrestha, Poojan; Dongol, Sabina; Karkey, Abhilasha; Thompson, Corinne N; Thieu, Nga Tran Vu; Thanh, Duy Pham; Baker, Stephen; Thwaites, Guy E; Wolbers, Marcel; Dolecek, Christiane; (2016) Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial. The Lancet infectious diseases, 16 (5). pp. 535-545. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(15)00530-7
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Aung, Htin Lin; Tun, Thanda; Moradigaravand, Danesh; Köser, Claudio U; Nyunt, Wint Wint; Aung, Si Thu; Lwin, Thandar; Thinn, Kyi Kyi; Crump, John A; Parkhill, Julian; +3 more... Peacock, Sharon J; Cook, Gregory M; Hill, Philip C; (2016) Whole-genome sequencing of multidrug-resistant Mycobacterium tuberculosis isolates from Myanmar. Journal of global antimicrobial resistance, 6. pp. 113-117. ISSN 2213-7165 DOI: https://doi.org/10.1016/j.jgar.2016.04.008
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Ba, H; Ahouidi, AD; Duffy, CW; Deh, YB; Diedhiou, C; Tandia, A; Diallo, MY; Assefa, S; Lô, BB; Elkory, MB; +1 more... Conway, DJ; (2016) [Evaluation of malaria rapid diagnostic test Optimal-IT® pLDH along the Plasmodium falciparum distribution limit in Mauritania]. Bulletin de la Societe de pathologie exotique (1990), 110 (1). pp. 31-37. ISSN 0037-9085 DOI: https://doi.org/10.1007/s13149-017-0541-y
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Ba, Hampâté; Duffy, Craig W; Ahouidi, Ambroise D; Deh, Yacine Boubou; Diallo, Mamadou Yero; Tandia, Abderahmane; Conway, David J; (2016) Widespread distribution of Plasmodium vivax malaria in Mauritania on the interface of the Maghreb and West Africa. Malaria journal, 15 (1). 80-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1118-8
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Baker, Stephen; Hombach, Joachim; Marks, Florian; (2016) What Have We Learned From the Typhoid Fever Surveillance in Africa Program? Clinical infectious diseases, 62 Sup (Suppl ). S1-S3. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ675
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Bouché, Laura; Panico, Maria; Hitchen, Paul; Binet, Daniel; Sastre, Federico; Faulds-Pain, Alexandra; Valiente, Esmeralda; Vinogradov, Evgeny; Aubry, Annie; Fulton, Kelly; +5 more... Twine, Susan; Logan, Susan M; Wren, Brendan W; Dell, Anne; Morris, Howard R; (2016) The Type B Flagellin of Hypervirulent Clostridium difficile Is Modified with Novel Sulfonated Peptidylamido-glycans. The Journal of biological chemistry, 291 (49). pp. 25439-25449. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M116.749481
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Brodrick, Hayley J; Raven, Kathy E; Harrison, Ewan M; Blane, Beth; Reuter, Sandra; Török, M Estée; Parkhill, Julian; Peacock, Sharon J; (2016) Whole-genome sequencing reveals transmission of vancomycin-resistant Enterococcus faecium in a healthcare network. Genome medicine, 8 (1). 4-. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-015-0259-7
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Busby, George Bj; Band, Gavin; Si Le, Quang; Jallow, Muminatou; Bougama, Edith; Mangano, Valentina D; Amenga-Etego, Lucas N; Enimil, Anthony; Apinjoh, Tobias; Ndila, Carolyne M; +7 more... Manjurano, Alphaxard; Nyirongo, Vysaul; Doumba, Ogobara; Rockett, Kirk A; Kwiatkowski, Dominic P; Spencer, Chris Ca; Malaria Genomic Epidemiology Network; (2016) Admixture into and within sub-Saharan Africa. eLife, 5 (JUN201). ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.15266
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Cairns, MD; Preston, MD; Hall, CL; Gerding, DN; Hawkey, PM; Kato, H; Kim, H; Kuijper, EJ; Lawley, TD; Pituch, H; +8 more... Reid, S; Kullin, B; Riley, TV; Solomon, K; Tsai, PJ; Weese, JS; Stabler, RA; Wren, BW; (2016) Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages. Journal of clinical microbiology, 55 (3). pp. 865-876. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.01296-16
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Cameron, Mary M; Acosta-Serrano, Alvaro; Bern, Caryn; Boelaert, Marleen; den Boer, Margriet; Burza, Sakib; Chapman, Lloyd AC; Chaskopoulou, Alexandra; Coleman, Michael; Courtenay, Orin; +21 more... Croft, Simon; Das, Pradeep; Dilger, Erin; Foster, Geraldine; Garlapati, Rajesh; Haines, Lee; Harris, Angela; Hemingway, Janet; Hollingsworth, T Déirdre; Jervis, Sarah; Medley, Graham; Miles, Michael; Paine, Mark; Picado, Albert; Poché, Richard; Ready, Paul; Rogers, Matthew; Rowland, Mark; Sundar, Shyam; de Vlas, Sake J; Weetman, David; (2016) Understanding the transmission dynamics of Leishmania donovani to provide robust evidence for interventions to eliminate visceral leishmaniasis in Bihar, India. Parasites & vectors, 9 (1). 25-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-016-1309-8
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Campino, Susana; Benavente, Ernest Diez; Assefa, Samuel; Thompson, Eloise; Drought, Laura G; Taylor, Catherine J; Gorvett, Zaria; Carret, Celine K; Flueck, Christian; Ivens, Al C; +4 more... Kwiatkowski, Dominic P; Alano, Pietro; Baker, David A; Clark, Taane G; (2016) Genomic variation in two gametocyte non-producing Plasmodium falciparum clonal lines. Malaria journal, 15 (1). 229-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1254-1
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Celma, Cristina C; Stewart, Meredith; Wernike, Kerstin; Eschbaumer, Michael; Gonzalez-Molleda, Lorenzo; Breard, Emmanuel; Schulz, Claudia; Hoffmann, Bernd; Haegeman, Andy; De Clercq, Kris; +4 more... Zientara, Stephan; van Rijn, Piet A; Beer, Martin; Roy, Polly; (2016) Replication-Deficient Particles: New Insights into the Next Generation of Bluetongue Virus Vaccines. Journal of virology, 91 (1). ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.01892-16
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Chaguza, Chrispin; Cornick, Jennifer E; Harris, Simon R; Andam, Cheryl P; Bricio-Moreno, Laura; Yang, Marie; Yalcin, Feyruz; Ousmane, Sani; Govindpersad, Shanil; Senghore, Madikay; +20 more... Ebruke, Chinelo; Du Plessis, Mignon; Kiran, Anmol M; Pluschke, Gerd; Sigauque, Betuel; McGee, Lesley; Klugman, Keith P; Turner, Paul; Corander, Jukka; Parkhill, Julian; Collard, Jean-Marc; Antonio, Martin; von Gottberg, Anne; Heyderman, Robert S; French, Neil; Kadioglu, Aras; Hanage, William P; Everett, Dean B; Bentley, Stephen D; PAGe Consortium; (2016) Understanding pneumococcal serotype 1 biology through population genomic analysis. BMC infectious diseases, 16 (1). 649-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-016-1987-z
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Chang, David C; Hoang, Long T; Mohamed Naim, Ahmad Nazri; Dong, Hongping; Schreiber, Mark J; Hibberd, Martin L; Tan, Min Jie Alvin; Shi, Pei-Yong; (2016) Evasion of early innate immune response by 2'-O-methylation of dengue genomic RNA. Virology, 499. pp. 259-266. ISSN 0042-6822 DOI: https://doi.org/10.1016/j.virol.2016.09.022 Full text not available from this repository.

Chantratita, N; Tandhavanant, S; Seal, S; Wikraiphat, C; Wongsuvan, G; Ariyaprasert, P; Suntornsut, P; Teerawattanasook, N; Jutrakul, Y; Srisurat, N; +11 more... Chaimanee, P; Mahavanakul, W; Srisamang, P; Phiphitaporn, S; Mokchai, M; Anukunananchai, J; Wongratanacheewin, S; Chetchotisakd, P; Emond, MJ; Peacock, SJ; West, TE; (2016) TLR4 genetic variation is associated with inflammatory responses in Gram-positive sepsis. Clinical microbiology and infection, 23 (1). 47.e1-47.e10. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2016.08.028
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Chantratita, N; Wikraiphat, C; Tandhavanant, S; Wongsuvan, G; Ariyaprasert, P; Suntornsut, P; Thaipadungpanit, J; Teerawattanasook, N; Jutrakul, Y; Srisurat, N; +7 more... Chaimanee, P; Anukunananchai, J; Phiphitaporn, S; Srisamang, P; Chetchotisakd, P; West, TE; Peacock, SJ; (2016) Comparison of community-onset Staphylococcus argenteus and Staphylococcus aureus sepsis in Thailand: a prospective multicentre observational study. Clinical microbiology and infection, 22 (5). 458.e11-458.e19. ISSN 1198-743X DOI: https://doi.org/10.1016/j.cmi.2016.01.008
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Chen, Feng; Wang, Shuang; Jiang, Xiaoqian; Ding, Sijie; Lu, Yao; Kim, Jihoon; Sahinalp, S Cenk; Shimizu, Chisato; Burns, Jane C; Wright, Victoria J; +9 more... Png, Eileen; Hibberd, Martin L; Lloyd, David D; Yang, Hai; Telenti, Amalio; Bloss, Cinnamon S; Fox, Dov; Lauter, Kristin; Ohno-Machado, Lucila; (2016) PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. Bioinformatics (Oxford, England), 33 (6). pp. 871-878. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/btw758 Full text not available from this repository.

Chenge, Jude; Kavanagh, Madeline E; Driscoll, Max D; McLean, Kirsty J; Young, Douglas B; Cortes, Teresa; Matak-Vinkovic, Dijana; Levy, Colin W; Rigby, Stephen EJ; Leys, David; +2 more... Abell, Chris; Munro, Andrew W; (2016) Structural characterization of CYP144A1 - a cytochrome P450 enzyme expressed from alternative transcripts in Mycobacterium tuberculosis. Scientific reports, 6 (1). 26628-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep26628
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Clark, CG; Stensvold, CR; (2016) Blastocystis: Isolation, Xenic Cultivation, and Cryopreservation. Current protocols in microbiology, 43. 20A.1.1-20A.1.8. ISSN 1934-8525 DOI: https://doi.org/10.1002/cpmc.18
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Duong, Vu Thuy; Phat, Voong Vinh; Tuyen, Ha Thanh; Dung, Tran Thi Ngoc; Trung, Pham Duc; Minh, Pham Van; Tu, Le Thi Phuong; Campbell, James I; Le Phuc, Hoang; Ha, Ton Thi Thanh; +15 more... Ngoc, Nguyen Minh; Huong, Nguyen Thi Thanh; Tam, Pham Thi Thanh; Huong, Dang Thao; Xang, Nguyen Van; Dong, Nguyen; Phuong, Le Thi; Hung, Nguyen Van; Phu, Bui Duc; Phuc, Tran My; Thwaites, Guy E; Vi, Lu Lan; Rabaa, Maia A; Thompson, Corinne N; Baker, Stephen; (2016) Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam. Journal of clinical microbiology, 54 (4). pp. 1094-1100. ISSN 0095-1137 DOI: https://doi.org/10.1128/JCM.03321-15
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Gomez, Andromeda; Andreu, Núria; Ferrer-Navarro, Mario; Yero, Daniel; Gibert, Isidre; (2016) Triclosan-induced genes Rv1686c-Rv1687c and Rv3161c are not involved in triclosan resistance in Mycobacterium tuberculosis. Scientific reports, 6 (1). 26221-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep26221
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Gouliouris, Theodore; Blane, Beth; Brodrick, Hayley J; Raven, Kathy E; Ambridge, Kirsty E; Kidney, Angela D; Hadjirin, Nazreen F; Török, M Estée; Limmathurotsakul, Direk; Peacock, Sharon J; (2016) Comparison of two chromogenic media for the detection of vancomycin-resistant enterococcal carriage by nursing home residents. Diagnostic microbiology and infectious disease, 85 (4). pp. 409-412. ISSN 0732-8893 DOI: https://doi.org/10.1016/j.diagmicrobio.2016.04.026
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Hamilton, William L; Claessens, Antoine; Otto, Thomas D; Kekre, Mihir; Fairhurst, Rick M; Rayner, Julian C; Kwiatkowski, Dominic; (2016) Extreme mutation bias and high AT content in Plasmodium falciparum. Nucleic acids research, 45 (4). pp. 1889-1901. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gkw1259
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Hantrakun, Viriya; Rongkard, Patpong; Oyuchua, Malinee; Amornchai, Premjit; Lim, Cherry; Wuthiekanun, Vanaporn; Day, Nicholas PJ; Peacock, Sharon J; Limmathurotsakul, Direk; (2016) Soil Nutrient Depletion Is Associated with the Presence of Burkholderia pseudomallei. Applied and environmental microbiology, 82 (24). pp. 7086-7092. ISSN 0099-2240 DOI: https://doi.org/10.1128/AEM.02538-16
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Harrison, Ewan M; Ludden, Catherine; Brodrick, Hayley J; Blane, Beth; Brennan, Gráinne; Morris, Dearbháile; Coll, Francesc; Reuter, Sandra; Brown, Nicholas M; Holmes, Mark A; +5 more... O'Connell, Brian; Parkhill, Julian; Török, M Estee; Cormican, Martin; Peacock, Sharon J; (2016) Transmission of methicillin-resistant Staphylococcus aureus in long-term care facilities and their related healthcare networks. Genome medicine, 8 (1). 102-. ISSN 1756-994X DOI: https://doi.org/10.1186/s13073-016-0353-5
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Herberg, Jethro A; Kaforou, Myrsini; Wright, Victoria J; Shailes, Hannah; Eleftherohorinou, Hariklia; Hoggart, Clive J; Cebey-López, Miriam; Carter, Michael J; Janes, Victoria A; Gormley, Stuart; +14 more... Shimizu, Chisato; Tremoulet, Adriana H; Barendregt, Anouk M; Salas, Antonio; Kanegaye, John; Pollard, Andrew J; Faust, Saul N; Patel, Sanjay; Kuijpers, Taco; Martinón-Torres, Federico; Burns, Jane C; Coin, Lachlan JM; Levin, Michael; IRIS Consortium; (2016) Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children. JAMA, 316 (8). pp. 835-845. ISSN 0098-7484 DOI: https://doi.org/10.1001/jama.2016.11236
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Im, Justin; Nichols, Chelsea; Bjerregaard-Andersen, Morten; Sow, Amy Gassama; Løfberg, Sandra; Tall, Adama; Pak, Gi Deok; Aaby, Peter; Baker, Stephen; Clemens, John D; +11 more... Espinoza, Ligia Maria Cruz; Konings, Frank; May, Jürgen; Monteiro, Mario; Niang, Aissatou; Panzner, Ursula; Park, Se Eun; Schütt-Gerowitt, Heidi; Wierzba, Thomas F; Marks, Florian; von Kalckreuth, Vera; (2016) Prevalence of Salmonella Excretion in Stool: A Community Survey in 2 Sites, Guinea-Bissau and Senegal. Clinical infectious diseases, 62 Sup (Suppl ). S50-S55. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ789 Full text not available from this repository.

International Typhoid Consortium; Wong, Vanessa K; Holt, Kathryn E; Okoro, Chinyere; Baker, Stephen; Pickard, Derek J; Marks, Florian; Page, Andrew J; Olanipekun, Grace; Munir, Huda; +22 more... Alter, Roxanne; Fey, Paul D; Feasey, Nicholas A; Weill, Francois-Xavier; Le Hello, Simon; Hart, Peter J; Kariuki, Samuel; Breiman, Robert F; Gordon, Melita A; Heyderman, Robert S; Jacobs, Jan; Lunguya, Octavie; Msefula, Chisomo; MacLennan, Calman A; Keddy, Karen H; Smith, Anthony M; Onsare, Robert S; De Pinna, Elizabeth; Nair, Satheesh; Amos, Ben; Dougan, Gordon; Obaro, Stephen; (2016) Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa. PLoS neglected tropical diseases, 10 (9). e0004781-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004781
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Jacob, Alison S; Andersen, Lee O'Brien; Bitar, Paulina Pavinski; Richards, Vincent P; Shah, Sarah; Stanhope, Michael J; Stensvold, C Rune; Clark, C Graham; (2016) Blastocystis Mitochondrial Genomes Appear to Show Multiple Independent Gains and Losses of Start and Stop Codons. Genome biology and evolution, 8 (11). pp. 3340-3350. ISSN 1759-6653 DOI: https://doi.org/10.1093/gbe/evw255
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Jamrozy, Dorota M; Harris, Simon R; Mohamed, Naglaa; Peacock, Sharon J; Tan, Charles Y; Parkhill, Julian; Anderson, Annaliesa S; Holden, Matthew TG; (2016) Pan-genomic perspective on the evolution of the Staphylococcus aureus USA300 epidemic. Microbial genomics, 2 (5). e000058-. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000058
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Judge, Kim; Hunt, Martin; Reuter, Sandra; Tracey, Alan; Quail, Michael A; Parkhill, Julian; Peacock, Sharon J; (2016) Comparison of bacterial genome assembly software for MinION data and their applicability to medical microbiology. Microbial genomics, 2 (9). e000085-. ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000085
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Kishore, Kranti G; Ghashghaei, Ouldouz; Estarellas, Carolina; Mestre, M Mar; Monturiol, Cristina; Kielland, Nicola; Kelly, John M; Francisco, Amanda Fortes; Jayawardhana, Shiromani; Muñoz-Torrero, Diego; +4 more... Pérez, Belén; Luque, F Javier; Gámez-Montaño, Rocío; Lavilla, Rodolfo; (2016) Insertion of Isocyanides into N-Si Bonds: Multicomponent Reactions with Azines Leading to Potent Antiparasitic Compounds. Angewandte Chemie (International ed in English), 55 (31). pp. 8994-8998. ISSN 1433-7851 DOI: https://doi.org/10.1002/anie.201604109
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Leung, Jacqueline M; Hong, Chau Tran Thi; Trung, Nghia Ho Dang; Thi, Hoa Nhu; Minh, Chau Nguyen Ngoc; Thi, Thuy Vu; Hong, Dinh Thanh; Man, Dinh Nguyen Huy; Knowles, Sarah CL; Wolbers, Marcel; +4 more... Hoang, Nhat Le Thanh; Thwaites, Guy; Graham, Andrea L; Baker, Stephen; (2016) The impact of albendazole treatment on the incidence of viral- and bacterial-induced diarrhea in school children in southern Vietnam: study protocol for a randomized controlled trial. Trials, 17 (1). 279-. ISSN 1745-6215 DOI: https://doi.org/10.1186/s13063-016-1406-1
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Lim, Cherry; Takahashi, Emi; Hongsuwan, Maliwan; Wuthiekanun, Vanaporn; Thamlikitkul, Visanu; Hinjoy, Soawapak; Day, Nicholas Pj; Peacock, Sharon J; Limmathurotsakul, Direk; (2016) Epidemiology and burden of multidrug-resistant bacterial infection in a developing country. eLife, 5 (Septem). ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.18082
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Limmathurotsakul, Direk; Golding, Nick; Dance, David Ab; Messina, Jane P; Pigott, David M; Moyes, Catherine L; Rolim, Dionne B; Bertherat, Eric; Day, Nicholas Pj; Peacock, Sharon J; +1 more... Hay, Simon I; (2016) Predicted global distribution of Burkholderia pseudomallei and burden of melioidosis. Nature microbiology, 1 (1). 15008-. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2015.8
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Lu, Lu; Van Dung, Nguyen; Bryant, Juliet E; Carrique-Mas, Juan; Van Cuong, Nguyen; Anh, Pham Honh; Rabaa, Maia A; Baker, Stephen; Simmonds, Peter; Woolhouse, Mark E; (2016) Evolution and phylogeographic dissemination of endemic porcine picornaviruses in Vietnam. Virus evolution, 2 (1). vew001-. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vew001
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Lulla, Valeria; Lulla, Aleksei; Wernike, Kerstin; Aebischer, Andrea; Beer, Martin; Roy, Polly; (2016) Assembly of Replication-Incompetent African Horse Sickness Virus Particles: Rational Design of Vaccines for All Serotypes. Journal of virology, 90 (16). pp. 7405-7414. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.00548-16
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Makendi, Carine; Page, Andrew J; Wren, Brendan W; Le Thi Phuong, Tu; Clare, Simon; Hale, Christine; Goulding, David; Klemm, Elizabeth J; Pickard, Derek; Okoro, Chinyere; +10 more... Hunt, Martin; Thompson, Corinne N; Phu Huong Lan, Nguyen; Tran Do Hoang, Nhu; Thwaites, Guy E; Le Hello, Simon; Brisabois, Anne; Weill, François-Xavier; Baker, Stephen; Dougan, Gordon; (2016) A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions. PLoS neglected tropical diseases, 10 (2). e0004446-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004446
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MalariaGEN Plasmodium falciparum Community Project; (2016) Genomic epidemiology of artemisinin resistant malaria. eLife, 5 (MARCH2). ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.08714
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Martinón-Torres, Federico; Png, Eileen; Khor, Chiea Chuen; Davila, Sonia; Wright, Victoria J; Sim, Kar Seng; Vega, Ana; Fachal, Laura; Inwald, David; Nadel, Simon; +18 more... Carrol, Enitan D; Martinón-Torres, Nazareth; Alonso, Sonia Marcos; Carracedo, Angel; Morteruel, Elvira; López-Bayón, Julio; Torre, Andrés Concha; Monge, Cristina Calvo; de Aguilar, Pilar Azcón González; Torné, Elisabeth Esteban; Martínez-Padilla, María Del Carmen; Martinón-Sánchez, José María; Levin, Michael; Hibberd, Martin L; Salas, Antonio; ESIGEM network; ESPID meningococcal consortium – UK; EUCLIDS consortium members - Imperial College London (www.euclid; (2016) Natural resistance to Meningococcal Disease related to CFH loci: Meta-analysis of genome-wide association studies. Scientific reports, 6 (1). 35842-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep35842
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Maude, Rapeephan R; Ghose, Aniruddha; Samad, Rasheda; de Jong, Hanna K; Fukushima, Masako; Wijedoru, Lalith; Hassan, Mahtab Uddin; Hossain, Md Amir; Karim, Md Rezaul; Sayeed, Abdullah Abu; +19 more... van den Ende, Stannie; Pal, Sujat; Zahed, ASM; Rahman, Wahid; Karnain, Rifat; Islam, Rezina; Tran, Dung Thi Ngoc; Ha, Tuyen Thanh; Pham, Anh Hong; Campbell, James I; van Doorn, H Rogier; Maude, Richard J; van der Poll, Tom; Wiersinga, W Joost; Day, Nicholas PJ; Baker, Stephen; Dondorp, Arjen M; Parry, Christopher M; Faiz, Md Abul; (2016) A prospective study of the importance of enteric fever as a cause of non-malarial febrile illness in patients admitted to Chittagong Medical College Hospital, Bangladesh. BMC infectious diseases, 16 (1). 567-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-016-1886-3
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Melo-Filho, CC; Dantas, RF; Braga, RC; Neves, BJ; Senger, MR; Valente, WC; Rezende-Neto, JM; Chaves, WT; Muratov, EN; Paveley, RA; +5 more... Furnham, N; Kamentsky, L; Carpenter, AE; Silva-Junior, FP; Andrade, CH; (2016) QSAR-Driven Discovery of Novel Chemical Scaffolds Active against Schistosoma mansoni. Journal of chemical information and modeling, 56 (7). pp. 1357-72. ISSN 1549-9596 DOI: https://doi.org/10.1021/acs.jcim.6b00055
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Moon, RW; Sharaf, H; Hastings, CH; Ho, YS; Nair, MB; Rchiad, Z; Knuepfer, E; Ramaprasad, A; Mohring, F; Amir, A; +7 more... Yusuf, NA; Hall, J; Almond, N; Lau, YL; Pain, A; Blackman, MJ; Holder, AA; (2016) Normocyte-binding protein required for human erythrocyte invasion by the zoonotic malaria parasite Plasmodium knowlesi. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1522469113
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Moradigaravand, Danesh; Boinett, Christine J; Martin, Veronique; Peacock, Sharon J; Parkhill, Julian; (2016) Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland. Genome research, 26 (8). pp. 1101-1109. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.205245.116
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Moradigaravand, Danesh; Grandjean, Louis; Martinez, Elena; Li, Hao; Zheng, Jun; Coronel, Jorge; Moore, David; Török, M Estée; Sintchenko, Vitali; Huang, Hairong; +4 more... Javid, Babak; Parkhill, Julian; Peacock, Sharon J; Köser, Claudio U; (2016) dfrA thyA Double Deletion in para-Aminosalicylic Acid-Resistant Mycobacterium tuberculosis Beijing Strains. Antimicrobial agents and chemotherapy, 60 (6). pp. 3864-3867. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00253-16
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Moradigaravand, Danesh; Reuter, Sandra; Martin, Veronique; Peacock, Sharon J; Parkhill, Julian; (2016) The dissemination of multidrug-resistant Enterobacter cloacae throughout the UK and Ireland. Nature microbiology, 1 (12). 16173-. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2016.173
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Neves, BJ; Dantas, RF; Senger, MR; Melo-Filho, CC; Valente, WC; de Almeida, AC; Rezende-Neto, JM; Lima, EF; Paveley, R; Furnham, N; +6 more... Muratov, E; Kamentsky, L; Carpenter, AE; Braga, RC; Silva-Junior, FP; Andrade, CH; (2016) Discovery of New Anti-Schistosomal Hits by Integration of QSAR-Based Virtual Screening and High Content Screening. Journal of medicinal chemistry, 59 (15). pp. 7075-88. ISSN 0022-2623 DOI: https://doi.org/10.1021/acs.jmedchem.5b02038
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Oguike, Mary C; Falade, Catherine O; Shu, Elvis; Enato, Izehiuwa G; Watila, Ismaila; Baba, Ebenezer S; Bruce, Jane; Webster, Jayne; Hamade, Prudence; Meek, Sylvia; +4 more... Chandramohan, Daniel; Sutherland, Colin J; Warhurst, David; Roper, Cally; (2016) Molecular determinants of sulfadoxine-pyrimethamine resistance in Plasmodium falciparum in Nigeria and the regional emergence of dhps 431V. International journal for parasitology Drugs and drug resistance, 6 (3). pp. 220-229. ISSN 2211-3207 DOI: https://doi.org/10.1016/j.ijpddr.2016.08.004
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Olmo, Francisco; Costas, Miquel; Marín, Clotilde; Rosales, Maria José; Martín-Escolano, Rubén; Cussó, Olaf; Gutierrez-Sánchez, Ramón; Ribas, Xavi; Sánchez-Moreno, Manuel; (2016) Tetradentate polyamines as efficient metallodrugs for Chagas disease treatment in murine model. Journal of chemotherapy (Florence, Italy), 29 (2). pp. 83-93. ISSN 1120-009X DOI: https://doi.org/10.1080/1120009X.2016.1190536
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Olmo, Francisco; Cussó, Olaf; Marín, Clotilde; Rosales, Maria José; Urbanová, Kristína; Krauth-Siegel, R Luise; Costas, Miquel; Ribas, Xavi; Sánchez-Moreno, Manuel; (2016) In vitro and in vivo identification of tetradentated polyamine complexes as highly efficient metallodrugs against Trypanosoma cruzi. Experimental parasitology, 164. pp. 20-30. ISSN 0014-4894 DOI: https://doi.org/10.1016/j.exppara.2016.02.004 Full text not available from this repository.

Pach, Alfred; Warren, Michelle; Chang, Irene; Im, Justin; Nichols, Chelsea; Meyer, Christian G; Pak, Gi Deok; Panzner, Ursula; Park, Se Eun; von Kalckreuth, Vera; +6 more... Baker, Stephen; Rabezanahary, Henintsoa; Rakotondrainiarivelo, Jean Philibert; Raminosoa, Tiana Mirana; Rakotozandrindrainy, Raphaël; Marks, Florian; (2016) A Qualitative Study Investigating Experiences, Perceptions, and Healthcare System Performance in Relation to the Surveillance of Typhoid Fever in Madagascar. Clinical infectious diseases, 62 Sup (suppl ). S69-S75. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/civ892 Full text not available from this repository.

Pallett, MA; Crepin, VF; Serafini, N; Habibzay, M; Kotik, O; Sanchez-Garrido, J; Di Santo, JP; Shenoy, AR; Berger, CN; Frankel, G; (2016) Bacterial virulence factor inhibits caspase-4/11 activation in intestinal epithelial cells. Mucosal immunology, 10 (3). pp. 602-612. ISSN 1933-0219 DOI: https://doi.org/10.1038/mi.2016.77
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Pang, Junxiong; Lindblom, Anna; Tolfvenstam, Thomas; Thein, Tun-Linn; Naim, Ahmad Nazri Mohamed; Ling, Ling; Chow, Angelia; Chen, Mark I-Cheng; Ooi, Eng Eong; Leo, Yee Sin; +1 more... Hibberd, Martin L; (2016) Discovery and Validation of Prognostic Biomarker Models to Guide Triage among Adult Dengue Patients at Early Infection. PloS one, 11 (6). e0155993-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0155993
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Pham Thanh, Duy; Karkey, Abhilasha; Dongol, Sabina; Ho Thi, Nhan; Thompson, Corinne N; Rabaa, Maia A; Arjyal, Amit; Holt, Kathryn E; Wong, Vanessa; Tran Vu Thieu, Nga; +13 more... Voong Vinh, Phat; Ha Thanh, Tuyen; Pradhan, Ashish; Shrestha, Saroj Kumar; Gajurel, Damoder; Pickard, Derek; Parry, Christopher M; Dougan, Gordon; Wolbers, Marcel; Dolecek, Christiane; Thwaites, Guy E; Basnyat, Buddha; Baker, Stephen; (2016) A novel ciprofloxacin-resistant subclade of H58 Salmonella Typhi is associated with fluoroquinolone treatment failure. eLife, 5 (MARCH2). e14003-. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.14003
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Pham Thanh, Duy; Thanh Tuyen, Ha; Nguyen Thi Nguyen, To; Chung The, Hao; Wick, Ryan R; Thwaites, Guy E; Baker, Stephen; Holt, Kathryn E; (2016) Inducible colistin resistance via a disrupted plasmid-borne mcr-1 gene in a 2008 Vietnamese Shigella sonnei isolate. The Journal of antimicrobial chemotherapy, 71 (8). pp. 2314-2317. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkw173 Full text not available from this repository.

Pham Thanh, Duy; Thompson, Corinne N; Rabaa, Maia A; Sona, Soeng; Sopheary, Sun; Kumar, Varun; Moore, Catrin; Tran Vu Thieu, Nga; Wijedoru, Lalith; Holt, Kathryn E; +8 more... Wong, Vanessa; Pickard, Derek; Thwaites, Guy E; Day, Nicholas; Dougan, Gordon; Turner, Paul; Parry, Christopher M; Baker, Stephen; (2016) The Molecular and Spatial Epidemiology of Typhoid Fever in Rural Cambodia. PLoS neglected tropical diseases, 10 (6). e0004785-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004785
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Phan, My VT; Anh, Pham Hong; Cuong, Nguyen Van; Munnink, Bas B Oude; van der Hoek, Lia; My, Phuc Tran; Tri, Tue Ngo; Bryant, Juliet E; Baker, Stephen; Thwaites, Guy; +5 more... Woolhouse, Mark; Kellam, Paul; Rabaa, Maia A; Cotten, Matthew; VIZIONS Consortium; (2016) Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection. Virus evolution, 2 (2). vew027-. ISSN 2057-1577 DOI: https://doi.org/10.1093/ve/vew027
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Phu Huong Lan, Nguyen; Le Thi Phuong, Tu; Nguyen Huu, Hien; Thuy, Le; Mather, Alison E; Park, Se Eun; Marks, Florian; Thwaites, Guy E; Van Vinh Chau, Nguyen; Thompson, Corinne N; +1 more... Baker, Stephen; (2016) Invasive Non-typhoidal Salmonella Infections in Asia: Clinical Observations, Disease Outcome and Dominant Serovars from an Infectious Disease Hospital in Vietnam. PLoS neglected tropical diseases, 10 (8). e0004857-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004857
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Raven, KE; Reuter, S; Gouliouris, T; Reynolds, R; Russell, JE; Brown, NM; Török, ME; Parkhill, J; Peacock, SJ; (2016) Genome-based characterization of hospital-adapted Enterococcus faecalis lineages. Nature microbiology, 1 (3). ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2015.33 Full text not available from this repository.

Raven, Kathy E; Reuter, Sandra; Gouliouris, Theodore; Reynolds, Rosy; Russell, Julie E; Brown, Nicholas M; Török, M Estée; Parkhill, Julian; Peacock, Sharon J; (2016) Genome-based characterization of hospital-adapted Enterococcus faecalis lineages. Nature microbiology, 1 (3). 15033-. ISSN 2058-5276 DOI: https://doi.org/10.1038/nmicrobiol.2015.33 Full text not available from this repository.

Raven, Kathy E; Reuter, Sandra; Reynolds, Rosy; Brodrick, Hayley J; Russell, Julie E; Török, M Estée; Parkhill, Julian; Peacock, Sharon J; (2016) A decade of genomic history for healthcare-associated Enterococcus faecium in the United Kingdom and Ireland. Genome research, 26 (10). pp. 1388-1396. ISSN 1088-9051 DOI: https://doi.org/10.1101/gr.204024.116
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Ravenhall, Matt; Benavente, Ernest Diez; Mipando, Mwapatsa; Jensen, Anja TR; Sutherland, Colin J; Roper, Cally; Sepúlveda, Nuno; Kwiatkowski, Dominic P; Montgomery, Jacqui; Phiri, Kamija S; +5 more... Terlouw, Anja; Craig, Alister; Campino, Susana; Ocholla, Harold; Clark, Taane G; (2016) Characterizing the impact of sustained sulfadoxine/pyrimethamine use upon the Plasmodium falciparum population in Malawi. Malaria journal, 15 (1). 575-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-016-1634-6
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Santos, JM; Duarte, N; Kehrer, J; Ramesar, J; Avramut, MC; Koster, AJ; Dessens, JT; Frischknecht, F; Chevalley-Maurel, S; Janse, CJ; +2 more... Franke-Fayard, B; Mair, GR; (2016) Maternally supplied S-acyl-transferase is required for crystalloid organelle formation and transmission of the malaria parasite. Proceedings of the National Academy of Sciences of the United States of America, 113 (26). pp. 7183-8. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1522381113
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Sim, Shuzhen; Hibberd, Martin L; (2016) Genomic approaches for understanding dengue: insights from the virus, vector, and host. Genome Biol, 17 (1). 38-. ISSN 1474-760X DOI: https://doi.org/10.1186/s13059-016-0907-2
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Stensvold, CR; Clark, CG; (2016) Current status of Blastocystis: A personal view. Parasitology international. ISSN 1383-5769 DOI: https://doi.org/10.1016/j.parint.2016.05.015
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Stensvold, CR; Clark, CG; (2016) Molecular Identification and Subtype Analysis of Blastocystis. Current protocols in microbiology, 43. 20A.2.1-20A.2.10. ISSN 1934-8525 DOI: https://doi.org/10.1002/cpmc.17
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Sung, Cynthia; Wei, Yuan; Watanabe, Satoru; Lee, How Sung; Khoo, Yok Moi; Fan, Lu; Rathore, Abhay PS; Chan, Kitti Wing-Ki; Choy, Milly M; Kamaraj, Uma S; +11 more... Sessions, October M; Aw, Pauline; de Sessions, Paola F; Lee, Bernett; Connolly, John E; Hibberd, Martin L; Vijaykrishna, Dhanasekaran; Wijaya, Limin; Ooi, Eng Eong; Low, Jenny Guek-Hong; Vasudevan, Subhash G; (2016) Extended Evaluation of Virological, Immunological and Pharmacokinetic Endpoints of CELADEN: A Randomized, Placebo-Controlled Trial of Celgosivir in Dengue Fever Patients. PLoS neglected tropical diseases, 10 (8). e0004851-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004851
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Suntornsut, Pornpan; Wongsuwan, Nittayasee; Malasit, Mayura; Kitphati, Rungreung; Michie, Susan; Peacock, Sharon J; Limmathurotsakul, Direk; (2016) Barriers and Recommended Interventions to Prevent Melioidosis in Northeast Thailand: A Focus Group Study Using the Behaviour Change Wheel. PLoS neglected tropical diseases, 10 (7). e0004823-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0004823
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The, Hao Chung; Thanh, Duy Pham; Holt, Kathryn E; Thomson, Nicholas R; Baker, Stephen; (2016) The genomic signatures of Shigella evolution, adaptation and geographical spread. Nature reviews Microbiology, 14 (4). pp. 235-250. ISSN 1740-1526 DOI: https://doi.org/10.1038/nrmicro.2016.10 Full text not available from this repository.

Thi Khanh Nhu, Nguyen; Riordan, David W; Do Hoang Nhu, Tran; Thanh, Duy Pham; Thwaites, Guy; Huong Lan, Nguyen Phu; Wren, Brendan W; Baker, Stephen; Stabler, Richard A; (2016) The induction and identification of novel Colistin resistance mutations in Acinetobacter baumannii and their implications. Scientific reports, 6 (1). 28291-. ISSN 2045-2322 DOI: https://doi.org/10.1038/srep28291
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Toleman, Michelle S; Reuter, Sandra; Coll, Francesc; Harrison, Ewan M; Blane, Beth; Brown, Nicholas M; Török, M Estée; Parkhill, Julian; Peacock, Sharon J; (2016) Systematic Surveillance Detects Multiple Silent Introductions and Household Transmission of Methicillin-Resistant Staphylococcus aureus USA300 in the East of England. The Journal of infectious diseases, 214 (3). pp. 447-453. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiw166
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Toleman, Michelle S; Reuter, Sandra; Coll, Francesc; Harrison, Ewan M; Peacock, Sharon J; (2016) Local Persistence of Novel MRSA Lineage after Hospital Ward Outbreak, Cambridge, UK, 2011-2013. Emerging infectious diseases, 22 (9). pp. 1658-1659. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2209.151100
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Valiente, Esmeralda; Bouché, Laura; Hitchen, Paul; Faulds-Pain, Alexandra; Songane, Mario; Dawson, Lisa F; Donahue, Elizabeth; Stabler, Richard A; Panico, Maria; Morris, Howard R; +4 more... Bajaj-Elliott, Mona; Logan, Susan M; Dell, Anne; Wren, Brendan W; (2016) Role of Glycosyltransferases Modifying Type B Flagellin of Emerging Hypervirulent Clostridium difficile Lineages and Their Impact on Motility and Biofilm Formation. The Journal of biological chemistry, 291 (49). pp. 25450-25461. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M116.749523
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Van Vinh Chau, Nguyen; Buu Chau, Le; Desquesnes, Marc; Herder, Stephane; Phu Huong Lan, Nguyen; Campbell, James I; Van Cuong, Nguyen; Yimming, Benjarat; Chalermwong, Piangjai; Jittapalapong, Sathaporn; +16 more... Ramon Franco, Jose; Tri Tue, Ngo; Rabaa, Maia A; Carrique-Mas, Juan; Pham Thi Thanh, Tam; Tran Vu Thieu, Nga; Berto, Alessandra; Thi Hoa, Ngo; Van Minh Hoang, Nguyen; Canh Tu, Nguyen; Khac Chuyen, Nguyen; Wills, Bridget; Tinh Hien, Tran; Thwaites, Guy E; Yacoub, Sophie; Baker, Stephen; (2016) A Clinical and Epidemiological Investigation of the First Reported Human Infection With the Zoonotic Parasite Trypanosoma evansi in Southeast Asia. Clinical infectious diseases, 62 (8). pp. 1002-1008. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciw052
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Van Voorhis, Wesley C; Adams, John H; Adelfio, Roberto; Ahyong, Vida; Akabas, Myles H; Alano, Pietro; Alday, Aintzane; Alemán Resto, Yesmalie; Alsibaee, Aishah; Alzualde, Ainhoa; +177 more... Andrews, Katherine T; Avery, Simon V; Avery, Vicky M; Ayong, Lawrence; Baker, Mark; Baker, Stephen; Ben Mamoun, Choukri; Bhatia, Sangeeta; Bickle, Quentin; Bounaadja, Lotfi; Bowling, Tana; Bosch, Jürgen; Boucher, Lauren E; Boyom, Fabrice F; Brea, Jose; Brennan, Marian; Burton, Audrey; Caffrey, Conor R; Camarda, Grazia; Carrasquilla, Manuela; Carter, Dee; Belen Cassera, Maria; Chih-Chien Cheng, Ken; Chindaudomsate, Worathad; Chubb, Anthony; Colon, Beatrice L; Colón-López, Daisy D; Corbett, Yolanda; Crowther, Gregory J; Cowan, Noemi; D'Alessandro, Sarah; Le Dang, Na; Delves, Michael; DeRisi, Joseph L; Du, Alan Y; Duffy, Sandra; Abd El-Salam El-Sayed, Shimaa; Ferdig, Michael T; Fernández Robledo, José A; Fidock, David A; Florent, Isabelle; Fokou, Patrick VT; Galstian, Ani; Gamo, Francisco Javier; Gokool, Suzanne; Gold, Ben; Golub, Todd; Goldgof, Gregory M; Guha, Rajarshi; Guiguemde, W Armand; Gural, Nil; Guy, R Kiplin; Hansen, Michael AE; Hanson, Kirsten K; Hemphill, Andrew; Hooft van Huijsduijnen, Rob; Horii, Takaaki; Horrocks, Paul; Hughes, Tyler B; Huston, Christopher; Igarashi, Ikuo; Ingram-Sieber, Katrin; Itoe, Maurice A; Jadhav, Ajit; Naranuntarat Jensen, Amornrat; Jensen, Laran T; Jiang, Rays HY; Kaiser, Annette; Keiser, Jennifer; Ketas, Thomas; Kicka, Sebastien; Kim, Sunyoung; Kirk, Kiaran; Kumar, Vidya P; Kyle, Dennis E; Lafuente, Maria Jose; Landfear, Scott; Lee, Nathan; Lee, Sukjun; Lehane, Adele M; Li, Fengwu; Little, David; Liu, Liqiong; Llinás, Manuel; Loza, Maria I; Lubar, Aristea; Lucantoni, Leonardo; Lucet, Isabelle; Maes, Louis; Mancama, Dalu; Mansour, Nuha R; March, Sandra; McGowan, Sheena; Medina Vera, Iset; Meister, Stephan; Mercer, Luke; Mestres, Jordi; Mfopa, Alvine N; Misra, Raj N; Moon, Seunghyun; Moore, John P; Morais Rodrigues da Costa, Francielly; Müller, Joachim; Muriana, Arantza; Nakazawa Hewitt, Stephen; Nare, Bakela; Nathan, Carl; Narraidoo, Nathalie; Nawaratna, Sujeevi; Ojo, Kayode K; Ortiz, Diana; Panic, Gordana; Papadatos, George; Parapini, Silvia; Patra, Kailash; Pham, Ngoc; Prats, Sarah; Plouffe, David M; Poulsen, Sally-Ann; Pradhan, Anupam; Quevedo, Celia; Quinn, Ronald J; Rice, Christopher A; Abdo Rizk, Mohamed; Ruecker, Andrea; St Onge, Robert; Salgado Ferreira, Rafaela; Samra, Jasmeet; Robinett, Natalie G; Schlecht, Ulrich; Schmitt, Marjorie; Silva Villela, Filipe; Silvestrini, Francesco; Sinden, Robert; Smith, Dennis A; Soldati, Thierry; Spitzmüller, Andreas; Stamm, Serge Maximilian; Sullivan, David J; Sullivan, William; Suresh, Sundari; Suzuki, Brian M; Suzuki, Yo; Swamidass, S Joshua; Taramelli, Donatella; Tchokouaha, Lauve RY; Theron, Anjo; Thomas, David; Tonissen, Kathryn F; Townson, Simon; Tripathi, Abhai K; Trofimov, Valentin; Udenze, Kenneth O; Ullah, Imran; Vallieres, Cindy; Vigil, Edgar; Vinetz, Joseph M; Voong Vinh, Phat; Vu, Hoan; Watanabe, Nao-Aki; Weatherby, Kate; White, Pamela M; Wilks, Andrew F; Winzeler, Elizabeth A; Wojcik, Edward; Wree, Melanie; Wu, Wesley; Yokoyama, Naoaki; Zollo, Paul HA; Abla, Nada; Blasco, Benjamin; Burrows, Jeremy; Laleu, Benoît; Leroy, Didier; Spangenberg, Thomas; Wells, Timothy; Willis, Paul A; (2016) Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. PLoS pathogens, 12 (7). e1005763-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1005763
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Wagner, Josef; Coupland, Paul; Browne, Hilary P; Lawley, Trevor D; Francis, Suzanna C; Parkhill, Julian; (2016) Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification. BMC microbiology, 16 (1). 274-. ISSN 1471-2180 DOI: https://doi.org/10.1186/s12866-016-0891-4
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Wong, Vanessa K; Baker, Stephen; Connor, Thomas R; Pickard, Derek; Page, Andrew J; Dave, Jayshree; Murphy, Niamh; Holliman, Richard; Sefton, Armine; Millar, Michael; +4 more... Dyson, Zoe A; Dougan, Gordon; Holt, Kathryn E; International Typhoid Consortium; (2016) An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid. Nature communications, 7 (1). 12827-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms12827
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Yu, Xia; Wang, Guirong; Chen, Suting; Wei, Guomei; Shang, Yuanyuan; Dong, Lingling; Schön, Thomas; Moradigaravand, Danesh; Parkhill, Julian; Peacock, Sharon J; +2 more... Köser, Claudio U; Huang, Hairong; (2016) Wild-Type and Non-Wild-Type Mycobacterium tuberculosis MIC Distributions for the Novel Fluoroquinolone Antofloxacin Compared with Those for Ofloxacin, Levofloxacin, and Moxifloxacin. Antimicrobial agents and chemotherapy, 60 (9). pp. 5232-5237. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00393-16
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Book Section

Preston, MD; Stabler, RA; (2016) From FASTQ to Function: In Silico Methods for Processing Next-Generation Sequencing Data. In: Roberts, AP; Mullany, P, (eds.) Clostridium difficile. Springer, New York, pp. 23-33. ISBN 9781493963591 DOI: https://doi.org/10.1007/978-1-4939-6361-4_3 Full text not available from this repository.

Monograph

Conference or Workshop Item

Thesis

Makendi Njock, EC; (2016) The phylogenetic and phenotypic analysis of Salmonella enterica serovar Weltevreden. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02550034
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Other

Crepin, VF; Collins, JW; Habibzay, M; Frankel, G; (2016) Citrobacter rodentium mouse model of bacterial infection. Nature Research. DOI: https://doi.org/10.1038/nprot.2016.100 Full text not available from this repository.

This list was generated on Wed Mar 27 05:50:54 2024 GMT.