Items where Author is "107852"

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Number of items: 33.

2017

Furnham, N; (2017) Complementary Sources of Protein Functional Information: The Far Side of GO. In: UNSPECIFIED, (ed.) The Gene Ontology Handbook. Humana Press (Springer Imprint), pp. 263-274. ISBN 1940-6029 DOI: 10.1007/978-1-4939-3743-1_19
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Tyzack, JD; Furnham, N; Sillitoe, I; Orengo, CM; Thornton, JM; (2017) Understanding enzyme function evolution from a computational perspective. Current opinion in structural biology, 47. pp. 131-139. ISSN 0959-440X DOI: 10.1016/j.sbi.2017.08.003 Full text not available from this repository.

2016

Mascotti, ML; Juri Ayub, M; Furnham, N; Thornton, JM; Laskowski, RA; (2016) Chopping and changing: The evolution of the flavin-dependent monooxygenases. Journal of molecular biology, 428 (15). pp. 3131-46. ISSN 0022-2836 DOI: 10.1016/j.jmb.2016.07.003 Full text not available from this repository.

Melo-Filho, CC; Dantas, RF; Braga, RC; Neves, BJ; Senger, MR; Valente, WC; Rezende-Neto, JM; Chaves, WT; Muratov, EN; Paveley, RA; +5 more... (2016) QSAR-Driven Discovery of Novel Chemical Scaffolds Active against Schistosoma mansoni. Journal of chemical information and modeling, 56 (7). pp. 1357-72. ISSN 1549-9596 DOI: 10.1021/acs.jcim.6b00055 Full text not available from this repository.

Neves, BJ; Dantas, RF; Senger, MR; Melo-Filho, CC; Valente, WC; de Almeida, AC; Rezende-Neto, JM; Lima, EF; Paveley, R; Furnham, N; +6 more... (2016) Discovery of New Anti-Schistosomal Hits by Integration of QSAR-Based Virtual Screening and High Content Screening. Journal of medicinal chemistry, 59 (15). pp. 7075-88. ISSN 0022-2623 DOI: 10.1021/acs.jmedchem.5b02038 Full text not available from this repository.

Phelan, J; Coll, F; McNerney, R; Ascher, DB; Pires, DE; Furnham, N; Coeck, N; Hill-Cawthorne, GA; Nair, MB; Mallard, K; +6 more... (2016) Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance. BMC Med, 14 (1). p. 31. ISSN 1741-7015 DOI: 10.1186/s12916-016-0575-9
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2015

Farnell, EJ; Tyagi, N; Ryan, S; Chalmers, IW; Pinot de Moira, A; Jones, FM; Wawrzyniak, J; Fitzsimmons, CM; Tukahebwa, EM; Furnham, N; +2 more... (2015) Known Allergen Structures Predict Schistosoma mansoni IgE-Binding Antigens in Human Infection. Front Immunol, 6. p. 26. ISSN 1664-3224 DOI: 10.3389/fimmu.2015.00026
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Martínez Cuesta, S; Rahman, SA; Furnham, N; Thornton, JM; (2015) The Classification and Evolution of Enzyme Function. Biophysical journal, 109 (6). pp. 1082-6. ISSN 0006-3495 DOI: 10.1016/j.bpj.2015.04.020 Full text not available from this repository.

Tyagi, N; Farnell, EJ; Fitzsimmons, CM; Ryan, S; Tukahebwa, E; Maizels, RM; Dunne, DW; Thornton, JM; Furnham, N; (2015) Comparisons of Allergenic and Metazoan Parasite Proteins: Allergy the Price of Immunity. PLoS computational biology, 11 (10). e1004546. ISSN 1553-734X DOI: 10.1371/journal.pcbi.1004546
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2014

Holliday, GL; Rahman, SA; Furnham, N; Thornton, JM; (2014) Exploring the biological and chemical complexity of the ligases. Journal of molecular biology, 426 (10). pp. 2098-111. ISSN 0022-2836 DOI: 10.1016/j.jmb.2014.03.008
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Martinez Cuesta, S; Furnham, N; Rahman, SA; Sillitoe, I; Thornton, JM; (2014) The evolution of enzyme function in the isomerases. Current opinion in structural biology, 26C. pp. 121-130. ISSN 0959-440X DOI: 10.1016/j.sbi.2014.06.002
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Sillitoe, I; Lewis, TE; Cuff, A; Das, S; Ashford, P; Dawson, NL; Furnham, N; Laskowski, RA; Lee, D; Lees, JG; +4 more... (2014) CATH: comprehensive structural and functional annotations for genome sequences. Nucleic acids research. ISSN 0305-1048 DOI: 10.1093/nar/gku947
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2013

Furnham, N; Holliday, GL; de Beer, TA; Jacobsen, JO; Pearson, WR; Thornton, JM; (2013) The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes. Nucleic acids research, 42 (Database issue). D485-9. ISSN 0305-1048 DOI: 10.1093/nar/gkt1243
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Furnham, N; Laskowski, RA; Thornton, JM; (2013) Abstracting knowledge from the protein data bank. Biopolymers, 99 (3). pp. 183-8. ISSN 0006-3525 DOI: 10.1002/bip.22107 Full text not available from this repository.

Rahman, SA; Cuesta, SM; Furnham, N; Holliday, GL; Thornton, JM; (2013) EC-BLAST: a tool to automatically search and compare enzyme reactions. Nature methods, 11 (2). pp. 171-4. ISSN 1548-7091 DOI: 10.1038/nmeth.2803
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2012

Furnham, N; Sillitoe, I; Holliday, GL; Cuff, AL; Laskowski, RA; Orengo, CA; Thornton, JM; (2012) Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies. PLoS computational biology, 8 (3). e1002403. ISSN 1553-734X DOI: 10.1371/journal.pcbi.1002403
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Furnham, N; de Beer, TA; Thornton, JM; (2012) Current challenges in genome annotation through structural biology and bioinformatics. Current opinion in structural biology, 22 (5). pp. 594-601. ISSN 0959-440X DOI: 10.1016/j.sbi.2012.07.005 Full text not available from this repository.

Sillitoe, I; Cuff, AL; Dessailly, BH; Dawson, NL; Furnham, N; Lee, D; Lees, JG; Lewis, TE; Studer, RA; Rentzsch, R; +3 more... (2012) New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures. Nucleic acids research, 41 (Database issue). D490-8. ISSN 0305-1048 DOI: 10.1093/nar/gks1211
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2011

Furnham, N; Sillitoe, I; Holliday, GL; Cuff, AL; Rahman, SA; Laskowski, RA; Orengo, CA; Thornton, JM; (2011) FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies. Nucleic acids research, 40 (Database issue). D776-82. ISSN 0305-1048 DOI: 10.1093/nar/gkr852
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2010

Cuff, AL; Sillitoe, I; Lewis, T; Clegg, AB; Rentzsch, R; Furnham, N; Pellegrini-Calace, M; Jones, D; Thornton, J; Orengo, CA; (2010) Extending CATH: increasing coverage of the protein structure universe and linking structure with function. Nucleic acids research, 39 (Database issue). D420-6. ISSN 0305-1048 DOI: 10.1093/nar/gkq1001
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2009

Furnham, N; Garavelli, JS; Apweiler, R; Thornton, JM; (2009) Missing in action: enzyme functional annotations in biological databases. Nature chemical biology, 5 (8). pp. 521-5. ISSN 1552-4450 DOI: 10.1038/nchembio0809-521 Full text not available from this repository.

2008

Bavro, VN; Pietras, Z; Furnham, N; Pérez-Cano, L; Fernández-Recio, J; Pei, XY; Misra, R; Luisi, B; (2008) Assembly and channel opening in a bacterial drug efflux machine. Molecular cell, 30 (1). pp. 114-21. ISSN 1097-2765 DOI: 10.1016/j.molcel.2008.02.015 Full text not available from this repository.

Furnham, N; de Bakker, PI; Gore, S; Burke, DF; Blundell, TL; (2008) Comparative modelling by restraint-based conformational sampling. BMC Struct Biol, 8. p. 7. ISSN 1472-6807 DOI: 10.1186/1472-6807-8-7
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Pietras, Z; Bavro, VN; Furnham, N; Pellegrini-Calace, M; Milner-White, EJ; Luisi, BF; (2008) Structure and mechanism of drug efflux machinery in Gram negative bacteria. Current drug targets, 9 (9). pp. 719-28. ISSN 1389-4501 Full text not available from this repository.

Ragone, S; Maman, JD; Furnham, N; Pellegrini, L; (2008) Structural basis for inhibition of homologous recombination by the RecX protein. The EMBO journal, 27 (16). pp. 2259-69. ISSN 0261-4189 DOI: 10.1038/emboj.2008.145
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2006

Doré, AS; Furnham, N; Davies, OR; Sibanda, BL; Chirgadze, DY; Jackson, SP; Pellegrini, L; Blundell, TL; (2006) Structure of an Xrcc4-DNA ligase IV yeast ortholog complex reveals a novel BRCT interaction mode. DNA repair, 5 (3). pp. 362-8. ISSN 1568-7864 DOI: 10.1016/j.dnarep.2005.11.004 Full text not available from this repository.

Furnham, N; Blundell, TL; DePristo, MA; Terwilliger, TC; (2006) Is one solution good enough? Nature structural & molecular biology, 13 (3). 184-5; discussion 185. ISSN 1545-9993 DOI: 10.1038/nsmb0306-184 Full text not available from this repository.

Furnham, N; Doré, AS; Chirgadze, DY; de Bakker, PI; Depristo, MA; Blundell, TL; (2006) Knowledge-based real-space explorations for low-resolution structure determination. Structure (London, England , 14 (8). pp. 1313-20. ISSN 0969-2126 DOI: 10.1016/j.str.2006.06.014 Full text not available from this repository.

de Bakker, PI; Furnham, N; Blundell, TL; DePristo, MA; (2006) Conformer generation under restraints. Current opinion in structural biology, 16 (2). pp. 160-5. ISSN 0959-440X DOI: 10.1016/j.sbi.2006.02.001 Full text not available from this repository.

2004

Furnham, N; Ruffle, S; Southan, C; (2004) Splice variants: a homology modeling approach. Proteins, 54 (3). pp. 596-608. ISSN 0887-3585 DOI: 10.1002/prot.10568 Full text not available from this repository.

This list was generated on Wed Nov 8 17:47:27 2017 GMT.