Chapman, J; Clayton, D; (2007) Detecting association using epistatic information. Genetic epidemiology. ISSN 0741-0395 DOI: https://doi.org/10.1002/gepi.20250 Full text not available from this repository.

Chapman, J; Clayton, D; (2007) One degree of freedom for dominance in indirect association studies. Genetic epidemiology, 31 (3). pp. 261-71. ISSN 0741-0395 DOI: https://doi.org/10.1002/gepi.20207 Full text not available from this repository.

Chapman, J; Verzilli, C; Whittaker, J; (2007) Large scale association studies: Implications for FDRs and a simple Bayesian alternative. [Conference or Workshop Item] http://researchonline.lshtm.ac.uk/id/eprint/8555 Full text not available from this repository.

Chapman, J; Whittaker, J; (2008) Analysis of multiple SNPs in a candidate gene or region. Genetic epidemiology, 32 (6). pp. 560-6. ISSN 0741-0395 DOI: https://doi.org/10.1002/gepi.20330 Full text not available from this repository.

Chapman, JM; Cooper, JD; Todd, JA; Clayton, DG; (2003) Detecting disease associations due to linkage disequilibrium using haplotype tags: a class of tests and the determinants of statistical power. Human heredity, 56 (1-3). pp. 18-31. ISSN 0001-5652 DOI: https://doi.org/10.1159/000073729 Full text not available from this repository.

Chapman, JM; Onnie, C; Prescott, N; Fisher, S; Lewis, C; Mathew, C; Verzilli, CJ; Whittaker, JC; (2008) Searching for genotype-phenotype structure: Trying to understand Crohn's disease. Annals of human genetics, 72. p. 688. ISSN 0003-4800 http://researchonline.lshtm.ac.uk/id/eprint/7101 Full text not available from this repository.

Chapman, JM; Onnie, CM; Prescott, NJ; Fisher, SA; Mansfield, JC; Mathew, CG; Lewis, CM; Verzilli, CJ; Whittaker, JC; (2009) Searching for Genotype-Phenotype Structure: Using Hierarchical Log-Linear Models in Crohn Disease. American journal of human genetics, 84 (2). pp. 178-87. ISSN 0002-9297 DOI: https://doi.org/10.1016/j.ajhg.2008.12.015 Full text not available from this repository.

Clayton, D; Chapman, J; Cooper, J; (2004) Use of unphased multilocus genotype data in indirect association studies. Genetic epidemiology, 27 (4). pp. 415-28. ISSN 0741-0395 DOI: https://doi.org/10.1002/gepi.20032 Full text not available from this repository.

Lowe, CE; Cooper, JD; Chapman, JM; Barratt, BJ; Twells, RC; Green, EA; Savage, DA; Guja, C; Ionescu-Tîrgovişte, C; Tuomilehto-Wolf, E; +3 more... Tuomilehto, J; Todd, JA; Clayton, DG; (2004) Cost-effective analysis of candidate genes using htSNPs: a staged approach. Genes and immunity, 5 (4). pp. 301-5. ISSN 1466-4879 DOI: https://doi.org/10.1038/sj.gene.6364064 Full text not available from this repository.

Maier, LM; Chapman, J; Howson, JM; Clayton, DG; Pask, R; Strachan, DP; McArdle, WL; Twells, RC; Todd, JA; (2005) No evidence of association or interaction between the IL4RA, IL4, and IL13 genes in type 1 diabetes. American journal of human genetics, 76 (3). pp. 517-21. ISSN 0002-9297 DOI: https://doi.org/10.1086/428387 Full text not available from this repository.

Verzilli, C; Chapman, J; Hingorani, A; Pablo-Casas, J; Shah, T; Smeeth, L; Whittaker, J; (2007) Bayesian meta analysis of genetic association studies with different sets of markers. Annals of human genetics, 71. pp. 552-553. ISSN 0003-4800 http://researchonline.lshtm.ac.uk/id/eprint/8490 Full text not available from this repository.

Verzilli, C; Shah, T; Casas, JP; Chapman, J; Sandhu, M; Debenham, SL; Boekholdt, MS; Khaw, KT; Wareham, NJ; Judson, R; +10 more... Benjamin, EJ; Kathiresan, S; Larson, MG; Rong, J; Sofat, R; Humphries, SE; Smeeth, L; Cavalleri, G; Whittaker, JC; Hingorani, AD; (2008) Bayesian meta-analysis of genetic association studies with different sets of markers. American journal of human genetics, 82 (4). pp. 859-72. ISSN 0002-9297 DOI: https://doi.org/10.1016/j.ajhg.2008.01.016 Full text not available from this repository.

Wallace, C; Chapman, JM; Clayton, DG; (2006) Improved power offered by a score test for linkage disequilibrium mapping of quantitative-trait loci by selective genotyping. American journal of human genetics, 78 (3). pp. 498-504. ISSN 0002-9297 DOI: https://doi.org/10.1086/500562 Full text not available from this repository.

Whittaker, JC; Chapman, J; (2007) Analysis of multiple SNPs in a candidate gene or region. Genetic epidemiology, 31 (6). p. 650. ISSN 0741-0395 http://researchonline.lshtm.ac.uk/id/eprint/8560 Full text not available from this repository.

Walker, Jemma; (2012) Bayesian modelling in genetic association studies. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.01635516